sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | segemehl 0.3.4-2 (mips64el) Sat, 14 Mar 2020 16:55:43 +0000 | +==============================================================================+ Package: segemehl Version: 0.3.4-2 Source Version: 0.3.4-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-3537d7a7-2b7e-43da-b09c-0bfa52c4bbea' with '<>' I: NOTICE: Log filtering will replace 'build/segemehl-0ijdeR/resolver-ar2GJZ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-14-0818.25.pdiff [5375 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-14-1414.42.pdiff [21.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-03-14-1414.42.pdiff [21.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-14-0818.25.pdiff [5675 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-14-1414.42.pdiff [15.5 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-03-14-1414.42.pdiff [15.5 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [7906 kB] Fetched 8156 kB in 1s (5555 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'segemehl' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/segemehl.git Please use: git clone https://salsa.debian.org/med-team/segemehl.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 252 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main segemehl 0.3.4-2 (dsc) [2005 B] Get:2 http://debian.oregonstate.edu/debian unstable/main segemehl 0.3.4-2 (tar) [244 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main segemehl 0.3.4-2 (diff) [5584 B] Fetched 252 kB in 0s (4617 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/segemehl-0ijdeR/segemehl-0.3.4' with '<>' I: NOTICE: Log filtering will replace 'build/segemehl-0ijdeR' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), pkg-config, libhts-dev, libncurses-dev, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 12), pkg-config, libhts-dev, libncurses-dev, zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [428 B] Get:5 copy:/<>/apt_archive ./ Packages [518 B] Fetched 1903 B in 0s (79.8 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libbrotli1:mips64el libbsd0 libbz2-1.0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl3-gnutls:mips64el libdb5.3:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:mips64el libelf1 libffi7:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc1-mips64el-cross libgcrypt20:mips64el libglib2.0-0 libgmp10:mips64el libgnutls30:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgpg-error0:mips64el libgssapi-krb5-2:mips64el libhogweed5:mips64el libhts-dev:mips64el libhts3:mips64el libicu63 libidn2-0:mips64el libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el libldap-2.4-2:mips64el libldap-common liblocale-gettext-perl liblzma-dev:mips64el liblzma5:mips64el libmagic-mgc libmagic1 libncurses-dev:mips64el libncurses6:mips64el libncursesw6:mips64el libnettle7:mips64el libnghttp2-14:mips64el libp11-kit0:mips64el libpipeline1 libpsl5:mips64el librtmp1:mips64el libsasl2-2:mips64el libsasl2-modules-db:mips64el libsigsegv2 libssh2-1:mips64el libssl1.1:mips64el libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtasn1-6:mips64el libtinfo6:mips64el libtool libuchardet0 libunistring2:mips64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db pkg-config po-debconf sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc g++-9-multilib-mips64el-linux-gnuabi64 gcc-9-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips64el libc-l10n:mips64el locales:mips64el glibc-doc manpages-dev:mips64el rng-tools:mips64el gnutls-bin:mips64el krb5-doc:mips64el krb5-user:mips64el liblzma-doc:mips64el ncurses-doc:mips64el libstdc++-9-doc libstdc++-9-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx ca-certificates:mips64el libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:mips64el krb5-locales:mips64el libgpm2:mips64el publicsuffix:mips64el libsasl2-modules:mips64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdmainutils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libbrotli1:mips64el libbsd0 libbz2-1.0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl3-gnutls:mips64el libdb5.3:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:mips64el libelf1 libffi7:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc1-mips64el-cross libgcrypt20:mips64el libglib2.0-0 libgmp10:mips64el libgnutls30:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgpg-error0:mips64el libgssapi-krb5-2:mips64el libhogweed5:mips64el libhts-dev:mips64el libhts3:mips64el libicu63 libidn2-0:mips64el libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el libldap-2.4-2:mips64el libldap-common liblocale-gettext-perl liblzma-dev:mips64el liblzma5:mips64el libmagic-mgc libmagic1 libncurses-dev:mips64el libncurses6:mips64el libncursesw6:mips64el libnettle7:mips64el libnghttp2-14:mips64el libp11-kit0:mips64el libpipeline1 libpsl5:mips64el librtmp1:mips64el libsasl2-2:mips64el libsasl2-modules-db:mips64el libsigsegv2 libssh2-1:mips64el libssl1.1:mips64el libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtasn1-6:mips64el libtinfo6:mips64el libtool libuchardet0 libunistring2:mips64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db pkg-config po-debconf sbuild-build-depends-main-dummy:mips64el sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el 0 upgraded, 131 newly installed, 0 to remove and 0 not upgraded. Need to get 88.9 MB of archives. After this operation, 349 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [944 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10-20200304-1 [195 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-9-base mips64el 9.3.0-3 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.34-2cross5 [2313 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.15-1 [104 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-2 [2633 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-3 [1677 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-3 [10.7 MB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64-base amd64 9.2.1-24cross1 [195 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [6464 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [16.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base-mipsen all 9.2.1-24cross1 [191 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.29-8cross1 [1324 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mips64el-cross all 1:9.2.1-24cross1 [69.2 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 9.2.1-24cross1 [76.6 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 9.2.1-24cross1 [7436 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-mips64el-cross all 9.2.1-24cross1 [247 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [6811 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1484 B] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 9.2.1-24cross1 [398 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.4.8-1cross1 [1139 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.29-8cross1 [2456 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-mips64el-cross all 9.2.1-24cross1 [1725 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-mips64el-linux-gnuabi64 amd64 9.2.1-24cross1 [7046 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1192 B] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-3 [8296 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-4 [709 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.8 [6704 B] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.9 [183 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.0-2 [1341 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.9 [994 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 10-20200304-1 [69.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.15-1 [95.5 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.30-2 [2553 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 10-20200304-1 [7524 B] Get:83 http://debian.oregonstate.edu/debian unstable/main mips64el libbrotli1 mips64el 1.0.7-6 [273 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main mips64el libbz2-1.0 mips64el 1.0.8-2 [47.3 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.4.19-1 [1068 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.15-1 [118 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.30-2 [2475 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main mips64el libcom-err2 mips64el 1.45.5-2 [71.2 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main mips64el libgmp10 mips64el 2:6.2.0+dfsg-4 [241 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main mips64el libnettle7 mips64el 3.5.1+really3.5.1-2 [236 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main mips64el libhogweed5 mips64el 3.5.1+really3.5.1-2 [132 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main mips64el libunistring2 mips64el 0.9.10-2 [376 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main mips64el libidn2-0 mips64el 2.3.0-1 [84.5 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main mips64el libffi7 mips64el 3.3-3 [22.5 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main mips64el libp11-kit0 mips64el 0.23.20-1 [269 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main mips64el libtasn1-6 mips64el 4.16.0-2 [52.6 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main mips64el libgnutls30 mips64el 3.6.12-2 [1066 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main mips64el libkeyutils1 mips64el 1.6.1-2 [15.0 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5support0 mips64el 1.17-6 [62.6 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mips64el libk5crypto3 mips64el 1.17-6 [121 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mips64el libssl1.1 mips64el 1.1.1d-2 [1140 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5-3 mips64el 1.17-6 [333 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mips64el libgssapi-krb5-2 mips64el 1.17-6 [141 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mips64el libdb5.3 mips64el 5.3.28+dfsg1-0.6 [597 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mips64el libsasl2-modules-db mips64el 2.1.27+dfsg-2 [68.3 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mips64el libsasl2-2 mips64el 2.1.27+dfsg-2 [102 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.49+dfsg-2 [92.0 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mips64el libldap-2.4-2 mips64el 2.4.49+dfsg-2 [206 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mips64el libnghttp2-14 mips64el 1.40.0-1 [80.8 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mips64el libpsl5 mips64el 0.21.0-1 [54.9 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-2 [88.2 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main mips64el librtmp1 mips64el 2.4+20151223.gitfa8646d.1-2+b1 [56.0 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main mips64el libgpg-error0 mips64el 1.37-1 [68.9 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main mips64el libgcrypt20 mips64el 1.8.5-5 [497 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mips64el libssh2-1 mips64el 1.8.0-2.1 [134 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mips64el libcurl3-gnutls mips64el 7.68.0-1 [296 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mips64el libdeflate0 mips64el 1.5-3 [50.2 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 10-20200304-1 [89.5 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-9-dev mips64el 9.3.0-3 [247 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main mips64el liblzma5 mips64el 5.2.4-1+b1 [151 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main mips64el libhts3 mips64el 1.10.2-3 [346 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main mips64el liblzma-dev mips64el 5.2.4-1+b1 [214 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g-dev mips64el 1:1.2.11.dfsg-2 [191 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main mips64el libhts-dev mips64el 1.10.2-3 [4862 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main mips64el libtinfo6 mips64el 6.2-1 [328 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main mips64el libncurses6 mips64el 6.2-1 [89.9 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main mips64el libncursesw6 mips64el 6.2-1 [118 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main mips64el libncurses-dev mips64el 6.2-1 [357 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 10-20200304-1 [434 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-9-dev mips64el 9.3.0-3 [1712 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main amd64 pkg-config amd64 0.29-6 [63.5 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 88.9 MB in 1s (112 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12839 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../006-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:mips64el. Preparing to unpack .../007-gcc-10-base_10-20200304-1_mips64el.deb ... Unpacking gcc-10-base:mips64el (10-20200304-1) ... Selecting previously unselected package gcc-9-base:mips64el. Preparing to unpack .../008-gcc-9-base_9.3.0-3_mips64el.deb ... Unpacking gcc-9-base:mips64el (9.3.0-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../009-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../010-libmagic-mgc_1%3a5.38-4_amd64.deb ... Unpacking libmagic-mgc (1:5.38-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../011-libmagic1_1%3a5.38-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-4) ... Selecting previously unselected package file. Preparing to unpack .../012-file_1%3a5.38-4_amd64.deb ... Unpacking file (1:5.38-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../013-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../015-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-mips64el-linux-gnuabi64. Preparing to unpack .../021-binutils-mips64el-linux-gnuabi64_2.34-2cross5_amd64.deb ... Unpacking binutils-mips64el-linux-gnuabi64 (2.34-2cross5) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../022-libcrypt-dev_1%3a4.4.15-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.15-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../023-libc6-dev_2.30-2_amd64.deb ... Unpacking libc6-dev:amd64 (2.30-2) ... Selecting previously unselected package libstdc++-9-dev:amd64. Preparing to unpack .../024-libstdc++-9-dev_9.3.0-3_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.3.0-3) ... Selecting previously unselected package g++-9. Preparing to unpack .../025-g++-9_9.3.0-3_amd64.deb ... Unpacking g++-9 (9.3.0-3) ... Selecting previously unselected package g++. Preparing to unpack .../026-g++_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++ (4:9.2.1-3.1) ... Selecting previously unselected package build-essential. Preparing to unpack .../027-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-9-mips64el-linux-gnuabi64-base:amd64. Preparing to unpack .../028-gcc-9-mips64el-linux-gnuabi64-base_9.2.1-24cross1_amd64.deb ... Unpacking gcc-9-mips64el-linux-gnuabi64-base:amd64 (9.2.1-24cross1) ... Selecting previously unselected package cpp-9-mips64el-linux-gnuabi64. Preparing to unpack .../029-cpp-9-mips64el-linux-gnuabi64_9.2.1-24cross1_amd64.deb ... Unpacking cpp-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Selecting previously unselected package cpp-mips64el-linux-gnuabi64. Preparing to unpack .../030-cpp-mips64el-linux-gnuabi64_4%3a9.2.1-4.1_amd64.deb ... Unpacking cpp-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Selecting previously unselected package cross-config. Preparing to unpack .../031-cross-config_2.6.15-3_all.deb ... Unpacking cross-config (2.6.15-3) ... Selecting previously unselected package gcc-9-cross-base-mipsen. Preparing to unpack .../032-gcc-9-cross-base-mipsen_9.2.1-24cross1_all.deb ... Unpacking gcc-9-cross-base-mipsen (9.2.1-24cross1) ... Selecting previously unselected package libc6-mips64el-cross. Preparing to unpack .../033-libc6-mips64el-cross_2.29-8cross1_all.deb ... Unpacking libc6-mips64el-cross (2.29-8cross1) ... Selecting previously unselected package libgcc1-mips64el-cross. Preparing to unpack .../034-libgcc1-mips64el-cross_1%3a9.2.1-24cross1_all.deb ... Unpacking libgcc1-mips64el-cross (1:9.2.1-24cross1) ... Selecting previously unselected package libgomp1-mips64el-cross. Preparing to unpack .../035-libgomp1-mips64el-cross_9.2.1-24cross1_all.deb ... Unpacking libgomp1-mips64el-cross (9.2.1-24cross1) ... Selecting previously unselected package libatomic1-mips64el-cross. Preparing to unpack .../036-libatomic1-mips64el-cross_9.2.1-24cross1_all.deb ... Unpacking libatomic1-mips64el-cross (9.2.1-24cross1) ... Selecting previously unselected package libgcc-9-dev-mips64el-cross. Preparing to unpack .../037-libgcc-9-dev-mips64el-cross_9.2.1-24cross1_all.deb ... Unpacking libgcc-9-dev-mips64el-cross (9.2.1-24cross1) ... Selecting previously unselected package gcc-9-mips64el-linux-gnuabi64. Preparing to unpack .../038-gcc-9-mips64el-linux-gnuabi64_9.2.1-24cross1_amd64.deb ... Unpacking gcc-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Selecting previously unselected package gcc-mips64el-linux-gnuabi64. Preparing to unpack .../039-gcc-mips64el-linux-gnuabi64_4%3a9.2.1-4.1_amd64.deb ... Unpacking gcc-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Selecting previously unselected package libstdc++6-mips64el-cross. Preparing to unpack .../040-libstdc++6-mips64el-cross_9.2.1-24cross1_all.deb ... Unpacking libstdc++6-mips64el-cross (9.2.1-24cross1) ... Selecting previously unselected package linux-libc-dev-mips64el-cross. Preparing to unpack .../041-linux-libc-dev-mips64el-cross_5.4.8-1cross1_all.deb ... Unpacking linux-libc-dev-mips64el-cross (5.4.8-1cross1) ... Selecting previously unselected package libc6-dev-mips64el-cross. Preparing to unpack .../042-libc6-dev-mips64el-cross_2.29-8cross1_all.deb ... Unpacking libc6-dev-mips64el-cross (2.29-8cross1) ... Selecting previously unselected package libstdc++-9-dev-mips64el-cross. Preparing to unpack .../043-libstdc++-9-dev-mips64el-cross_9.2.1-24cross1_all.deb ... Unpacking libstdc++-9-dev-mips64el-cross (9.2.1-24cross1) ... Selecting previously unselected package g++-9-mips64el-linux-gnuabi64. Preparing to unpack .../044-g++-9-mips64el-linux-gnuabi64_9.2.1-24cross1_amd64.deb ... Unpacking g++-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Selecting previously unselected package g++-mips64el-linux-gnuabi64. Preparing to unpack .../045-g++-mips64el-linux-gnuabi64_4%3a9.2.1-4.1_amd64.deb ... Unpacking g++-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../046-libconfig-inifiles-perl_3.000002-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000002-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../047-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../048-libicu63_63.2-3_amd64.deb ... Unpacking libicu63:amd64 (63.2-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../049-libxml2_2.9.10+dfsg-4_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-4) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../050-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../051-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../052-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../053-libxml-libxml-perl_2.0134+dfsg-2_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../054-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../055-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../056-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../057-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../058-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../059-libdebian-dpkgcross-perl_2.6.15-3_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../060-dpkg-cross_2.6.15-3_all.deb ... Unpacking dpkg-cross (2.6.15-3) ... Selecting previously unselected package crossbuild-essential-mips64el. Preparing to unpack .../061-crossbuild-essential-mips64el_12.8_all.deb ... Unpacking crossbuild-essential-mips64el (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../062-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../063-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../064-libdebhelper-perl_12.9_all.deb ... Unpacking libdebhelper-perl (12.9) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../065-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../066-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../067-libfile-stripnondeterminism-perl_1.6.3-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.6.3-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../068-dh-strip-nondeterminism_1.6.3-2_all.deb ... Unpacking dh-strip-nondeterminism (1.6.3-2) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../069-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../070-dwz_0.13-5_amd64.deb ... Unpacking dwz (0.13-5) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../071-libglib2.0-0_2.64.0-2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.64.0-2) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../072-libcroco3_0.6.13-1_amd64.deb ... Unpacking libcroco3:amd64 (0.6.13-1) ... Selecting previously unselected package gettext. Preparing to unpack .../073-gettext_0.19.8.1-10_amd64.deb ... Unpacking gettext (0.19.8.1-10) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../074-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../075-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../076-debhelper_12.9_all.deb ... Unpacking debhelper (12.9) ... Selecting previously unselected package libgcc-s1:mips64el. Preparing to unpack .../077-libgcc-s1_10-20200304-1_mips64el.deb ... Unpacking libgcc-s1:mips64el (10-20200304-1) ... Selecting previously unselected package libcrypt1:mips64el. Preparing to unpack .../078-libcrypt1_1%3a4.4.15-1_mips64el.deb ... Unpacking libcrypt1:mips64el (1:4.4.15-1) ... Selecting previously unselected package libc6:mips64el. Preparing to unpack .../079-libc6_2.30-2_mips64el.deb ... Unpacking libc6:mips64el (2.30-2) ... Selecting previously unselected package libatomic1:mips64el. Preparing to unpack .../080-libatomic1_10-20200304-1_mips64el.deb ... Unpacking libatomic1:mips64el (10-20200304-1) ... Selecting previously unselected package libbrotli1:mips64el. Preparing to unpack .../081-libbrotli1_1.0.7-6_mips64el.deb ... Unpacking libbrotli1:mips64el (1.0.7-6) ... Selecting previously unselected package libbz2-1.0:mips64el. Preparing to unpack .../082-libbz2-1.0_1.0.8-2_mips64el.deb ... Unpacking libbz2-1.0:mips64el (1.0.8-2) ... Selecting previously unselected package linux-libc-dev:mips64el. Preparing to unpack .../083-linux-libc-dev_5.4.19-1_mips64el.deb ... 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Setting up gcc-9-mips64el-linux-gnuabi64-base:amd64 (9.2.1-24cross1) ... Setting up linux-libc-dev:mips64el (5.4.19-1) ... Setting up libc6-mips64el-cross (2.29-8cross1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up gcc-9-cross-base-mipsen (9.2.1-24cross1) ... Setting up libldap-common (2.4.49+dfsg-2) ... Setting up libyaml-perl (1.30-1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.34-2cross5) ... Setting up libicu63:amd64 (63.2-3) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-10-base:mips64el (10-20200304-1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up pkg-config (0.29-6) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.15-1) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.30-2) ... Setting up linux-libc-dev-mips64el-cross (5.4.8-1cross1) ... Setting up cpp-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up cpp-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libgomp1-mips64el-cross (9.2.1-24cross1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-4) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:mips64el (9.3.0-3) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libatomic1-mips64el-cross (9.2.1-24cross1) ... Setting up libgcc1-mips64el-cross (1:9.2.1-24cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-3) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up libc6-dev-mips64el-cross (2.29-8cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.3.0-3) ... Setting up autoconf (2.69-11.1) ... Setting up libstdc++6-mips64el-cross (9.2.1-24cross1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up libgcc-9-dev-mips64el-cross (9.2.1-24cross1) ... Setting up build-essential (12.8) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libstdc++-9-dev-mips64el-cross (9.2.1-24cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gcc-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-9-mips64el-linux-gnuabi64 (9.2.1-24cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-mips64el (12.8) ... Setting up libcrypt1:mips64el (1:4.4.15-1) ... Setting up libgcc-s1:mips64el (10-20200304-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:mips64el (2.30-2) ... Setting up libnettle7:mips64el (3.5.1+really3.5.1-2) ... Setting up libcrypt-dev:mips64el (1:4.4.15-1) ... Setting up libtasn1-6:mips64el (4.16.0-2) ... Setting up libc6-dev:mips64el (2.30-2) ... Setting up libbz2-1.0:mips64el (1.0.8-2) ... Setting up libdb5.3:mips64el (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:mips64el (10-20200304-1) ... Setting up libtinfo6:mips64el (6.2-1) ... Setting up libkeyutils1:mips64el (1.6.1-2) ... Setting up liblzma5:mips64el (5.2.4-1+b1) ... Setting up libgpg-error0:mips64el (1.37-1) ... Setting up libssl1.1:mips64el (1.1.1d-2) ... Setting up libbrotli1:mips64el (1.0.7-6) ... Setting up libffi7:mips64el (3.3-3) ... Setting up libnghttp2-14:mips64el (1.40.0-1) ... Setting up libunistring2:mips64el (0.9.10-2) ... Setting up libdeflate0:mips64el (1.5-3) ... Setting up libgcrypt20:mips64el (1.8.5-5) ... Setting up debhelper (12.9) ... Setting up zlib1g:mips64el (1:1.2.11.dfsg-2) ... Setting up libidn2-0:mips64el (2.3.0-1) ... Setting up libcom-err2:mips64el (1.45.5-2) ... Setting up libgomp1:mips64el (10-20200304-1) ... Setting up libkrb5support0:mips64el (1.17-6) ... Setting up libsasl2-modules-db:mips64el (2.1.27+dfsg-2) ... Setting up libgmp10:mips64el (2:6.2.0+dfsg-4) ... Setting up libncurses6:mips64el (6.2-1) ... Setting up libp11-kit0:mips64el (0.23.20-1) ... Setting up libatomic1:mips64el (10-20200304-1) ... Setting up libncursesw6:mips64el (6.2-1) ... Setting up libk5crypto3:mips64el (1.17-6) ... Setting up libsasl2-2:mips64el (2.1.27+dfsg-2) ... Setting up liblzma-dev:mips64el (5.2.4-1+b1) ... Setting up zlib1g-dev:mips64el (1:1.2.11.dfsg-2) ... Setting up libssh2-1:mips64el (1.8.0-2.1) ... Setting up libkrb5-3:mips64el (1.17-6) ... Setting up libncurses-dev:mips64el (6.2-1) ... Setting up libpsl5:mips64el (0.21.0-1) ... Setting up libhogweed5:mips64el (3.5.1+really3.5.1-2) ... Setting up libgcc-9-dev:mips64el (9.3.0-3) ... Setting up libgnutls30:mips64el (3.6.12-2) ... Setting up librtmp1:mips64el (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libgssapi-krb5-2:mips64el (1.17-6) ... Setting up libstdc++-9-dev:mips64el (9.3.0-3) ... Setting up libldap-2.4-2:mips64el (2.4.49+dfsg-2) ... Setting up libcurl3-gnutls:mips64el (7.68.0-1) ... Setting up libhts3:mips64el (1.10.2-3) ... Setting up libhts-dev:mips64el (1.10.2-3) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.30-2) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-4 dpkg-dev_1.19.7 g++-9_9.3.0-3 gcc-8_8.4.0-1 gcc-9_9.3.0-3 libc6-dev_2.30-2 libstdc++-9-dev_9.3.0-3 libstdc++-9-dev-mips64el-cross_9.2.1-24cross1 libstdc++6_10-20200304-1 libstdc++6-mips64el-cross_9.2.1-24cross1 linux-libc-dev_5.4.19-1 Package versions: adduser_3.118 apt_2.0.0 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-4 binutils-common_2.34-4 binutils-mips64el-linux-gnuabi64_2.34-2cross5 binutils-x86-64-linux-gnu_2.34-4 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.4.0-1 cpp-9_9.3.0-3 cpp-9-mips64el-linux-gnuabi64_9.2.1-24cross1 cpp-mips64el-linux-gnuabi64_4:9.2.1-4.1 cross-config_2.6.15-3 crossbuild-essential-mips64el_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-3 g++-9-mips64el-linux-gnuabi64_9.2.1-24cross1 g++-mips64el-linux-gnuabi64_4:9.2.1-4.1 gcc_4:9.2.1-3.1 gcc-10-base_10-20200304-1 gcc-8_8.4.0-1 gcc-8-base_8.4.0-1 gcc-9_9.3.0-3 gcc-9-base_9.3.0-3 gcc-9-cross-base-mipsen_9.2.1-24cross1 gcc-9-mips64el-linux-gnuabi64_9.2.1-24cross1 gcc-9-mips64el-linux-gnuabi64-base_9.2.1-24cross1 gcc-mips64el-linux-gnuabi64_4:9.2.1-4.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.19-3 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-1 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.0.0 libarchive-zip-perl_1.68-1 libasan5_9.3.0-3 libatomic1_10-20200304-1 libatomic1-mips64el-cross_9.2.1-24cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbinutils_2.34-4 libblkid1_2.34-0.1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-2 libc-dev-bin_2.30-2 libc6_2.30-2 libc6-dev_2.30-2 libc6-dev-mips64el-cross_2.29-8cross1 libc6-mips64el-cross_2.29-8cross1 libcap-ng0_0.7.9-2.1+b2 libcc1-0_10-20200304-1 libcom-err2_1.45.5-2 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.15-1 libcrypt1_1:4.4.15-1 libctf-nobfd0_2.34-4 libctf0_2.34-4 libcurl3-gnutls_7.68.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.9 libdebian-dpkgcross-perl_2.6.15-3 libdeflate0_1.5-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libffi7_3.3-3 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libgcc-8-dev_8.4.0-1 libgcc-9-dev_9.3.0-3 libgcc-9-dev-mips64el-cross_9.2.1-24cross1 libgcc-s1_10-20200304-1 libgcc1_1:10-20200304-1 libgcc1-mips64el-cross_1:9.2.1-24cross1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.0-2 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.12-2 libgomp1_10-20200304-1 libgomp1-mips64el-cross_9.2.1-24cross1 libgpg-error0_1.37-1 libgssapi-krb5-2_1.17-6 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhts-dev_1.10.2-3 libhts3_1.10.2-3 libicu63_63.2-3 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 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libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libss2_1.45.5-2 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.3.0-3 libstdc++-9-dev-mips64el-cross_9.2.1-24cross1 libstdc++6_10-20200304-1 libstdc++6-mips64el-cross_9.2.1-24cross1 libsub-override-perl_0.09-2 libsystemd0_245-2 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10-20200304-1 libubsan1_10-20200304-1 libuchardet0_0.0.6-3 libudev1_245-2 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-4 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.4.19-1 linux-libc-dev-mips64el-cross_5.4.8-1cross1 login_1:4.8.1-1 logsave_1.45.5-2 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 pkg-config_0.29-6 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: segemehl Binary: segemehl Architecture: any Version: 0.3.4-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://www.bioinf.uni-leipzig.de/Software/segemehl/ Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/segemehl Vcs-Git: https://salsa.debian.org/med-team/segemehl.git Build-Depends: debhelper-compat (= 12), pkg-config, libhts-dev, libncurses-dev, zlib1g-dev Package-List: segemehl deb science optional arch=any Checksums-Sha1: 676d5d11382bc053fb1d5ce90bfbac1aeb26a9d9 244092 segemehl_0.3.4.orig.tar.xz 6c35fc793d2096d2ffe6e718ce94f8bfe34cde58 5584 segemehl_0.3.4-2.debian.tar.xz Checksums-Sha256: e498fb23e36d45a0d0035105812a747ca901af366d07dde431c25a49ee28abbc 244092 segemehl_0.3.4.orig.tar.xz 9dad57a9cf5cfd7f5504a648b26280012f72c7343285d48de084d1054f2d0658 5584 segemehl_0.3.4-2.debian.tar.xz Files: 7cbc36ce09d0328089db4031663744a5 244092 segemehl_0.3.4.orig.tar.xz 722d1a7ff65b29c0ae612de389b152ba 5584 segemehl_0.3.4-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl3TFS8RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEwUQ/8DCjnx4UBC1uNh4QLMXAEb0MDT9oOpkCE rVRw6ShXZw7Fviq5tfeo3y2U/vDh3JmdUVoq4yw4tODXkOR5WkE19y11GjjSW9ee hm65ypCLJafhIkT6zpt556LKs5br8qF4EuJ+1rNIgTgBaXHiLMfJQob3L8uDk9v7 ZMiGQYADSGWTfsgiLJ6Fo/0B0C7U88b3pstfOM0TIDRTMsZhY54wAhaSxaDiP2MQ 1Mejk9AC0XRJ+P8mrY5v57u/+em/b9iK0wR+ZSpZ6SQFZIB5Ri+qSOx0mzj0ZYiN strvLUO7BOBlnCiI1S8Qtf+P7l8YJ69cmIEOBPqpKvTSb/RVqGiUmy6z+HXEcv+c hWJKCJQqOAEbqV6kOkL1p0koap2gjqIHzMVonTZtf4KgFcgSaUa3cvzJo7LthH62 E1oK6aA6c69WVO34p2lcgvTueaTN+sR9hTbd8jyXphnncXfedKNYVna2wFc3RYCi eW8JzVUksMKay99NM3xk20bPoSfuP2VltDFbTBHrCuXJZp5jJXwAixr1+F0FuLqM FI2l5TKP2tM8lK3OxB7buSz+rRoAiLFHEf+GhV1PkJxfLkYov82oXun7rs+vw0MF j/PVXnp5QvZnQQgvBvEEKjVzPmMLt+sMUfMgqjfAJ87Sg416W8/PDCzTsY7aKj4I V95hF0+d95g= =RkXS -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Nov 18 22:03:27 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./segemehl_0.3.4-2.dsc dpkg-source: info: extracting segemehl in /<> dpkg-source: info: unpacking segemehl_0.3.4.orig.tar.xz dpkg-source: info: unpacking segemehl_0.3.4-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying rpath.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-3537d7a7-2b7e-43da-b09c-0bfa52c4bbea SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package segemehl dpkg-buildpackage: info: source version 0.3.4-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el fakeroot debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' Cleaning... rm -f -r build segemehl haarz make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- all make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mips64el-linux-gnuabi64-pkg-config CXX=mips64el-linux-gnuabi64-g\+\+ CC=mips64el-linux-gnuabi64-gcc all make[2]: Entering directory '/<>' Building... library for source build/matealign.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/matealign.o libs/matealign.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/locus.h:41, from include/mapfrag.h:39, from libs/matealign.c:32: libs/matealign.c: In function ‘bl_matealign’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/matealign.c:313:15: note: in expansion of macro ‘FREEMEMORY’ 313 | if(npos[0]) FREEMEMORY(NULL, spos[0]); | ^~~~~~~~~~ libs/matealign.c:313:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 313 | if(npos[0]) FREEMEMORY(NULL, spos[0]); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/locus.h:41, from include/mapfrag.h:39, from libs/matealign.c:32: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/matealign.c:314:15: note: in expansion of macro ‘FREEMEMORY’ 314 | if(npos[1]) FREEMEMORY(NULL, spos[1]); | ^~~~~~~~~~ libs/matealign.c:314:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 314 | if(npos[1]) FREEMEMORY(NULL, spos[1]); | ^~ Building... library for source build/alignment.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/alignment.o libs/alignment.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/mathematics.h:117, from libs/alignment.c:38: libs/alignment.c: In function ‘wrapAlignment’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/alignment.c:97:18: note: in expansion of macro ‘FREEMEMORY’ 97 | if(al->rmvseq) FREEMEMORY(NULL, al->v); | ^~~~~~~~~~ libs/alignment.c:97:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 97 | if(al->rmvseq) FREEMEMORY(NULL, al->v); | ^~ In file included from include/mathematics.h:117, from libs/alignment.c:38: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/alignment.c:98:18: note: in expansion of macro ‘FREEMEMORY’ 98 | if(al->rmuseq) FREEMEMORY(NULL, al->u); | ^~~~~~~~~~ libs/alignment.c:98:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 98 | if(al->rmuseq) FREEMEMORY(NULL, al->u); | ^~ Building... library for source build/nw.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/nw.o libs/nw.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/mappingqual.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/mappingqual.o libs/mappingqual.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/mapfrag.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/mapfrag.o libs/mapfrag.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/filebuffer.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/filebuffer.o libs/filebuffer.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/multicharseq.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/multicharseq.o libs/multicharseq.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from libs/multicharseq.c:38: libs/multicharseq.c: In function ‘destructMultiCharSeq’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/multicharseq.c:212:7: note: in expansion of macro ‘FREEMEMORY’ 212 | FREEMEMORY(space, mseq->markpos); | ^~~~~~~~~~ libs/multicharseq.c:211:2: note: some parts of macro expansion are not guarded by this ‘if’ clause 211 | if (mseq->markpos != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from libs/multicharseq.c:38: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/multicharseq.c:214:7: note: in expansion of macro ‘FREEMEMORY’ 214 | FREEMEMORY(space, mseq->map); | ^~~~~~~~~~ libs/multicharseq.c:213:2: note: some parts of macro expansion are not guarded by this ‘if’ clause 213 | if (mseq->map != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from libs/multicharseq.c:38: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/multicharseq.c:216:7: note: in expansion of macro ‘FREEMEMORY’ 216 | FREEMEMORY(space, mseq->ref); | ^~~~~~~~~~ libs/multicharseq.c:215:5: note: some parts of macro expansion are not guarded by this ‘if’ clause 215 | if (mseq->ref != NULL) | ^~ Building... library for source build/mathematics.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/mathematics.o libs/mathematics.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/mathematics.h:117, from libs/mathematics.c:38: libs/mathematics.c: In function ‘destructVector’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/mathematics.c:251:23: note: in expansion of macro ‘FREEMEMORY’ 251 | if (v->elements) FREEMEMORY(space, v->elements); | ^~~~~~~~~~ libs/mathematics.c:251:6: note: some parts of macro expansion are not guarded by this ‘if’ clause 251 | if (v->elements) FREEMEMORY(space, v->elements); | ^~ Building... library for source build/manopt.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/manopt.o libs/manopt.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/haarz.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/haarz.o libs/haarz.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/intervaltree.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/intervaltree.o libs/intervaltree.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/mathematics.h:117, from libs/intervaltree.c:27: libs/intervaltree.c: In function ‘bl_intervaltreeDestruct’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/intervaltree.c:443:19: note: in expansion of macro ‘FREEMEMORY’ 443 | if(root->ncoll) FREEMEMORY(NULL, root->collisions); | ^~~~~~~~~~ libs/intervaltree.c:443:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 443 | if(root->ncoll) FREEMEMORY(NULL, root->collisions); | ^~ Building... library for source build/bitvectoralg.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/bitvectoralg.o libs/bitvectoralg.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/iupac.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/iupac.o libs/iupac.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/splitalign.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/splitalign.o libs/splitalign.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: libs/splitalign.c: In function ‘bl_fixSplitAlignHoffmann’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1323:25: note: in expansion of macro ‘FREEMEMORY’ 1323 | if(leftseedno[0]) FREEMEMORY(space, leftseeds[0]); | ^~~~~~~~~~ libs/splitalign.c:1323:7: note: some parts of macro expansion are not guarded by this ‘if’ clause 1323 | if(leftseedno[0]) FREEMEMORY(space, leftseeds[0]); | ^~ In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1324:25: note: in expansion of macro ‘FREEMEMORY’ 1324 | if(leftseedno[1]) FREEMEMORY(space, leftseeds[1]); | ^~~~~~~~~~ libs/splitalign.c:1324:7: note: some parts of macro expansion are not guarded by this ‘if’ clause 1324 | if(leftseedno[1]) FREEMEMORY(space, leftseeds[1]); | ^~ In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1325:26: note: in expansion of macro ‘FREEMEMORY’ 1325 | if(rightseedno[0]) FREEMEMORY(space, rightseeds[0]); | ^~~~~~~~~~ libs/splitalign.c:1325:7: note: some parts of macro expansion are not guarded by this ‘if’ clause 1325 | if(rightseedno[0]) FREEMEMORY(space, rightseeds[0]); | ^~ In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1326:26: note: in expansion of macro ‘FREEMEMORY’ 1326 | if(rightseedno[1]) FREEMEMORY(space, rightseeds[1]); | ^~~~~~~~~~ libs/splitalign.c:1326:7: note: some parts of macro expansion are not guarded by this ‘if’ clause 1326 | if(rightseedno[1]) FREEMEMORY(space, rightseeds[1]); | ^~ In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: libs/splitalign.c: In function ‘bl_fixSplitAlignBrendel’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1565:27: note: in expansion of macro ‘FREEMEMORY’ 1565 | if(leftseedno[0]) FREEMEMORY(space, leftseeds[0]); | ^~~~~~~~~~ libs/splitalign.c:1565:9: note: some parts of macro expansion are not guarded by this ‘if’ clause 1565 | if(leftseedno[0]) FREEMEMORY(space, leftseeds[0]); | ^~ In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1566:27: note: in expansion of macro ‘FREEMEMORY’ 1566 | if(leftseedno[1]) FREEMEMORY(space, leftseeds[1]); | ^~~~~~~~~~ libs/splitalign.c:1566:9: note: some parts of macro expansion are not guarded by this ‘if’ clause 1566 | if(leftseedno[1]) FREEMEMORY(space, leftseeds[1]); | ^~ In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1567:28: note: in expansion of macro ‘FREEMEMORY’ 1567 | if(rightseedno[0]) FREEMEMORY(space, rightseeds[0]); | ^~~~~~~~~~ libs/splitalign.c:1567:9: note: some parts of macro expansion are not guarded by this ‘if’ clause 1567 | if(rightseedno[0]) FREEMEMORY(space, rightseeds[0]); | ^~ In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/bitvectoralg.h:32, from include/splitalign.h:29, from libs/splitalign.c:32: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/splitalign.c:1568:28: note: in expansion of macro ‘FREEMEMORY’ 1568 | if(rightseedno[1]) FREEMEMORY(space, rightseeds[1]); | ^~~~~~~~~~ libs/splitalign.c:1568:9: note: some parts of macro expansion are not guarded by this ‘if’ clause 1568 | if(rightseedno[1]) FREEMEMORY(space, rightseeds[1]); | ^~ Building... library for source build/fileBins.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/fileBins.o libs/fileBins.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from libs/fileBins.c:51: libs/fileBins.c: In function ‘bl_fileBinsSortLine’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/fileBins.c:901:18: note: in expansion of macro ‘FREEMEMORY’ 901 | if(fileSort) FREEMEMORY(space, line); | ^~~~~~~~~~ libs/fileBins.c:901:5: note: some parts of macro expansion are not guarded by this ‘if’ clause 901 | if(fileSort) FREEMEMORY(space, line); | ^~ Building... library for source build/sufarray.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/sufarray.o libs/sufarray.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: libs/sufarray.c: In function ‘destructSufArr’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:613:5: note: in expansion of macro ‘FREEMEMORY’ 613 | FREEMEMORY(space, arr->lcpctab); | ^~~~~~~~~~ libs/sufarray.c:612:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 612 | if (arr->lcpctab != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:615:5: note: in expansion of macro ‘FREEMEMORY’ 615 | FREEMEMORY(space, arr->inv_suftab); | ^~~~~~~~~~ libs/sufarray.c:614:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 614 | if (arr->inv_suftab != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:619:5: note: in expansion of macro ‘FREEMEMORY’ 619 | FREEMEMORY(space, arr->idvtab); | ^~~~~~~~~~ libs/sufarray.c:618:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 618 | if (arr->idvtab != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:624:5: note: in expansion of macro ‘FREEMEMORY’ 624 | FREEMEMORY(space, arr->suflink); | ^~~~~~~~~~ libs/sufarray.c:620:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 620 | if (arr->suflink != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:627:5: note: in expansion of macro ‘FREEMEMORY’ 627 | FREEMEMORY(space, arr->chldtab); | ^~~~~~~~~~ libs/sufarray.c:626:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 626 | if (arr->chldtab != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:629:5: note: in expansion of macro ‘FREEMEMORY’ 629 | FREEMEMORY(space, arr->mdfive); | ^~~~~~~~~~ libs/sufarray.c:628:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 628 | if (arr->mdfive) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:631:5: note: in expansion of macro ‘FREEMEMORY’ 631 | FREEMEMORY(space, arr->llvtab); | ^~~~~~~~~~ libs/sufarray.c:630:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 630 | if(arr->llvtab != NULL) | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/sufarray.h:45, from libs/sufarray.c:39: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/sufarray.c:636:5: note: in expansion of macro ‘FREEMEMORY’ 636 | FREEMEMORY(space, arr->id); | ^~~~~~~~~~ libs/sufarray.c:632:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 632 | if(arr->id != NULL) | ^~ Building... library for source build/gzip.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/gzip.o libs/gzip.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/info.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/info.o libs/info.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found libs/info.c: In function ‘timestr_r’: libs/info.c:64:50: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size between 0 and 12 [-Wformat-overflow=] 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~ libs/info.c:64:21: note: directive argument in the range [-2147481748, 2147483647] 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libs/info.c:64:5: note: ‘sprintf’ output between 16 and 67 bytes into a destination of size 26 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | wday_name[timeptr->tm_wday], mon_name[timeptr->tm_mon], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | timeptr->tm_mday, timeptr->tm_hour, timeptr->tm_min, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 | timeptr->tm_sec, 1900 + timeptr->tm_year); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libs/info.c: In function ‘infomsg’: libs/info.c:64:50: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size between 0 and 12 [-Wformat-overflow=] 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~ libs/info.c:64:21: note: directive argument in the range [-2147481748, 2147483647] 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libs/info.c:64:5: note: ‘sprintf’ output between 16 and 67 bytes into a destination of size 26 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | wday_name[timeptr->tm_wday], mon_name[timeptr->tm_mon], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | timeptr->tm_mday, timeptr->tm_hour, timeptr->tm_min, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 | timeptr->tm_sec, 1900 + timeptr->tm_year); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libs/info.c: In function ‘nfolevel’: libs/info.c:64:50: warning: ‘%d’ directive writing between 1 and 11 bytes into a region of size between 0 and 12 [-Wformat-overflow=] 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~ libs/info.c:64:21: note: directive argument in the range [-2147481748, 2147483647] 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ libs/info.c:64:5: note: ‘sprintf’ output between 16 and 67 bytes into a destination of size 26 64 | sprintf(result, "%.3s %.3s%3d %.2d:%.2d:%.2d %d", | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | wday_name[timeptr->tm_wday], mon_name[timeptr->tm_mon], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | timeptr->tm_mday, timeptr->tm_hour, timeptr->tm_min, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 | timeptr->tm_sec, 1900 + timeptr->tm_year); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Building... library for source build/brendel.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/brendel.o libs/brendel.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/manout.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/manout.o libs/manout.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/samio.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/samio.o libs/samio.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: libs/samio.c: In function ‘bl_samDestructTag’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:102:15: note: in expansion of macro ‘FREEMEMORY’ 102 | if(kv->tag) FREEMEMORY(NULL, kv->tag); | ^~~~~~~~~~ libs/samio.c:102:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 102 | if(kv->tag) FREEMEMORY(NULL, kv->tag); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:103:15: note: in expansion of macro ‘FREEMEMORY’ 103 | if(kv->val) FREEMEMORY(NULL, kv->val); | ^~~~~~~~~~ libs/samio.c:103:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 103 | if(kv->val) FREEMEMORY(NULL, kv->val); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:104:16: note: in expansion of macro ‘FREEMEMORY’ 104 | if(kv->type) FREEMEMORY(NULL, kv->type); | ^~~~~~~~~~ libs/samio.c:104:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 104 | if(kv->type) FREEMEMORY(NULL, kv->type); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:105:15: note: in expansion of macro ‘FREEMEMORY’ 105 | if(kv->key) FREEMEMORY(NULL, kv->key); | ^~~~~~~~~~ libs/samio.c:105:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 105 | if(kv->key) FREEMEMORY(NULL, kv->key); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: libs/samio.c: In function ‘bl_samDestruct’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:112:21: note: in expansion of macro ‘FREEMEMORY’ 112 | if(samrec->qname) FREEMEMORY(NULL, samrec->qname); | ^~~~~~~~~~ libs/samio.c:112:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 112 | if(samrec->qname) FREEMEMORY(NULL, samrec->qname); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:113:21: note: in expansion of macro ‘FREEMEMORY’ 113 | if(samrec->rname) FREEMEMORY(NULL, samrec->rname); | ^~~~~~~~~~ libs/samio.c:113:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 113 | if(samrec->rname) FREEMEMORY(NULL, samrec->rname); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:114:21: note: in expansion of macro ‘FREEMEMORY’ 114 | if(samrec->cigar) FREEMEMORY(NULL, samrec->cigar); | ^~~~~~~~~~ libs/samio.c:114:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 114 | if(samrec->cigar) FREEMEMORY(NULL, samrec->cigar); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:115:21: note: in expansion of macro ‘FREEMEMORY’ 115 | if(samrec->rnext) FREEMEMORY(NULL, samrec->rnext); | ^~~~~~~~~~ libs/samio.c:115:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 115 | if(samrec->rnext) FREEMEMORY(NULL, samrec->rnext); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:116:21: note: in expansion of macro ‘FREEMEMORY’ 116 | if(samrec->seq) FREEMEMORY(NULL, samrec->seq); | ^~~~~~~~~~ libs/samio.c:116:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 116 | if(samrec->seq) FREEMEMORY(NULL, samrec->seq); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:117:21: note: in expansion of macro ‘FREEMEMORY’ 117 | if(samrec->qual) FREEMEMORY(NULL, samrec->qual); | ^~~~~~~~~~ libs/samio.c:117:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 117 | if(samrec->qual) FREEMEMORY(NULL, samrec->qual); | ^~ In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from libs/samio.c:33: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/samio.c:121:20: note: in expansion of macro ‘FREEMEMORY’ 121 | if(samrec->tags) FREEMEMORY(NULL, samrec->tags); | ^~~~~~~~~~ libs/samio.c:121:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 121 | if(samrec->tags) FREEMEMORY(NULL, samrec->tags); | ^~ libs/samio.c: In function ‘bl_samgetNextSplitRefIdx’: libs/samio.c:369:3: warning: ‘%s’ directive argument is null [-Wformat-overflow=] 369 | fprintf(stderr, "ref: '%s'\n", ref); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Building... library for source build/stringutils.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/stringutils.o libs/stringutils.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from libs/stringutils.c:39: libs/stringutils.c: In function ‘destructStringset’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/stringutils.c:274:9: note: in expansion of macro ‘FREEMEMORY’ 274 | FREEMEMORY(space, s->strings[i].str); | ^~~~~~~~~~ libs/stringutils.c:273:7: note: some parts of macro expansion are not guarded by this ‘if’ clause 273 | if(s->strings[i].str != NULL) | ^~ Building... library for source build/charsequence.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/charsequence.o libs/charsequence.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from libs/charsequence.c:26: libs/charsequence.c: In function ‘destructSequence’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/charsequence.c:467:4: note: in expansion of macro ‘FREEMEMORY’ 467 | FREEMEMORY(space, sequence->sequence); | ^~~~~~~~~~ libs/charsequence.c:466:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 466 | if (sequence->sequence != NULL) | ^~ In file included from libs/charsequence.c:26: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/charsequence.c:470:5: note: in expansion of macro ‘FREEMEMORY’ 470 | FREEMEMORY(space, sequence->alphabetname); | ^~~~~~~~~~ libs/charsequence.c:469:2: note: some parts of macro expansion are not guarded by this ‘if’ clause 469 | if (sequence->alphabetname != NULL) | ^~ In file included from libs/charsequence.c:26: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/charsequence.c:472:2: note: in expansion of macro ‘FREEMEMORY’ 472 | FREEMEMORY(space, sequence->url); | ^~~~~~~~~~ libs/charsequence.c:471:5: note: some parts of macro expansion are not guarded by this ‘if’ clause 471 | if (sequence->url != NULL) | ^~ In file included from libs/charsequence.c:26: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/charsequence.c:474:2: note: in expansion of macro ‘FREEMEMORY’ 474 | FREEMEMORY(space, sequence->info); | ^~~~~~~~~~ libs/charsequence.c:473:5: note: some parts of macro expansion are not guarded by this ‘if’ clause 473 | if (sequence->info != NULL) | ^~ Building... library for source build/match.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/match.o libs/match.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/sort.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/sort.o libs/sort.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/radixsort.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/radixsort.o libs/radixsort.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/pigeon.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/pigeon.o libs/pigeon.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/segemehl.h:44, from libs/pigeon.c:35: libs/pigeon.c: In function ‘pigeon’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/pigeon.c:352:13: note: in expansion of macro ‘FREEMEMORY’ 352 | if(check) FREEMEMORY(space, check); | ^~~~~~~~~~ libs/pigeon.c:352:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 352 | if(check) FREEMEMORY(space, check); | ^~ Building... library for source build/junctions.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/junctions.o libs/junctions.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/memory.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/memory.o libs/memory.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/segemehl.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/segemehl.o libs/segemehl.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/bedfiles.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/bedfiles.o libs/bedfiles.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/container.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/container.o libs/container.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/portable_endian.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/portable_endian.o libs/portable_endian.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/gzidx.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/gzidx.o libs/gzidx.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/bgzip.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/bgzip.o libs/bgzip.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/karlin.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/karlin.o libs/karlin.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/vtprogressbar.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/vtprogressbar.o libs/vtprogressbar.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/kdchain.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/kdchain.o libs/kdchain.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/fileio.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/fileio.o libs/fileio.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/sw.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/sw.o libs/sw.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/samheader.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/samheader.o libs/samheader.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/bitArray.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/bitArray.o libs/bitArray.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/segemehl_helper.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/segemehl_helper.o libs/segemehl_helper.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/aluruSort.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/aluruSort.o libs/aluruSort.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/vqueue.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/vqueue.o libs/vqueue.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/bamio.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/bamio.o libs/bamio.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/charsequence.h:43, from include/multicharseq.h:43, from include/samio.h:23, from include/bamio.h:21, from libs/bamio.c:32: libs/bamio.c: In function ‘bl_bamCrossSectionDestruct’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/bamio.c:468:20: note: in expansion of macro ‘FREEMEMORY’ 468 | if(cs->x[k].n) FREEMEMORY(NULL, cs->x[k].d); | ^~~~~~~~~~ libs/bamio.c:468:5: note: some parts of macro expansion are not guarded by this ‘if’ clause 468 | if(cs->x[k].n) FREEMEMORY(NULL, cs->x[k].d); | ^~ Building... library for source build/stack.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/stack.o libs/stack.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/kdseed.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/kdseed.o libs/kdseed.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/merge.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/merge.o libs/merge.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from libs/merge.c:34: libs/merge.c: In function ‘se_mergeWorker’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/merge.c:1096:20: note: in expansion of macro ‘FREEMEMORY’ 1096 | if(curkey) FREEMEMORY(NULL, curkey); | ^~~~~~~~~~ libs/merge.c:1096:9: note: some parts of macro expansion are not guarded by this ‘if’ clause 1096 | if(curkey) FREEMEMORY(NULL, curkey); | ^~ In file included from include/stringutils.h:27, from libs/merge.c:34: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/merge.c:1216:26: note: in expansion of macro ‘FREEMEMORY’ 1216 | if(!reads && curkey) FREEMEMORY(NULL, curkey); | ^~~~~~~~~~ libs/merge.c:1216:5: note: some parts of macro expansion are not guarded by this ‘if’ clause 1216 | if(!reads && curkey) FREEMEMORY(NULL, curkey); | ^~ Building... library for source build/debug.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/debug.o libs/debug.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/seqclip.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/seqclip.o libs/seqclip.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from include/biofiles.h:43, from include/alignment.h:38, from include/sw.h:38, from libs/seqclip.c:44: libs/seqclip.c: In function ‘bl_Find3PrimeGreedy’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/seqclip.c:529:9: note: in expansion of macro ‘FREEMEMORY’ 529 | FREEMEMORY(space, adapter); | ^~~~~~~~~~ libs/seqclip.c:528:7: note: some parts of macro expansion are not guarded by this ‘if’ clause 528 | if(adapter) | ^~ Building... library for source build/locus.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/locus.o libs/locus.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/bitVector.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/bitVector.o libs/bitVector.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/biofiles.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/biofiles.o libs/biofiles.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/annotation.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/annotation.o libs/annotation.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found In file included from include/stringutils.h:27, from libs/annotation.c:29: libs/annotation.c: In function ‘bl_annotationitemDestruct’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:149:23: note: in expansion of macro ‘FREEMEMORY’ 149 | if(item->chromname) FREEMEMORY(space, item->chromname); | ^~~~~~~~~~ libs/annotation.c:149:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 149 | if(item->chromname) FREEMEMORY(space, item->chromname); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:150:18: note: in expansion of macro ‘FREEMEMORY’ 150 | if(item->name) FREEMEMORY(space, item->name); | ^~~~~~~~~~ libs/annotation.c:150:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 150 | if(item->name) FREEMEMORY(space, item->name); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:151:21: note: in expansion of macro ‘FREEMEMORY’ 151 | if(item->itemRgb) FREEMEMORY(space, item->itemRgb); | ^~~~~~~~~~ libs/annotation.c:151:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 151 | if(item->itemRgb) FREEMEMORY(space, item->itemRgb); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:152:24: note: in expansion of macro ‘FREEMEMORY’ 152 | if(item->blockSizes) FREEMEMORY(space, item->blockSizes); | ^~~~~~~~~~ libs/annotation.c:152:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 152 | if(item->blockSizes) FREEMEMORY(space, item->blockSizes); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:153:25: note: in expansion of macro ‘FREEMEMORY’ 153 | if(item->blockStarts) FREEMEMORY(space, item->blockStarts); | ^~~~~~~~~~ libs/annotation.c:153:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 153 | if(item->blockStarts) FREEMEMORY(space, item->blockStarts); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:154:26: note: in expansion of macro ‘FREEMEMORY’ 154 | if(item->blockRefseqs) FREEMEMORY(space, item->blockRefseqs); | ^~~~~~~~~~ libs/annotation.c:154:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 154 | if(item->blockRefseqs) FREEMEMORY(space, item->blockRefseqs); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:155:26: note: in expansion of macro ‘FREEMEMORY’ 155 | if(item->blockStrands) FREEMEMORY(space, item->blockStrands); | ^~~~~~~~~~ libs/annotation.c:155:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 155 | if(item->blockStrands) FREEMEMORY(space, item->blockStrands); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:156:20: note: in expansion of macro ‘FREEMEMORY’ 156 | if(item->source) FREEMEMORY(space, item->source); | ^~~~~~~~~~ libs/annotation.c:156:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 156 | if(item->source) FREEMEMORY(space, item->source); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: libs/annotation.c: In function ‘bl_annotationtrackDestruct’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:409:24: note: in expansion of macro ‘FREEMEMORY’ 409 | if(track->trackname) FREEMEMORY(space, track->trackname); | ^~~~~~~~~~ libs/annotation.c:409:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 409 | if(track->trackname) FREEMEMORY(space, track->trackname); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:410:23: note: in expansion of macro ‘FREEMEMORY’ 410 | if(track->filename) FREEMEMORY(space, track->filename); | ^~~~~~~~~~ libs/annotation.c:410:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 410 | if(track->filename) FREEMEMORY(space, track->filename); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:411:26: note: in expansion of macro ‘FREEMEMORY’ 411 | if(track->description) FREEMEMORY(space, track->description); | ^~~~~~~~~~ libs/annotation.c:411:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 411 | if(track->description) FREEMEMORY(space, track->description); | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:418:20: note: in expansion of macro ‘FREEMEMORY’ 418 | if(track->items) FREEMEMORY(space, track->items) ; | ^~~~~~~~~~ libs/annotation.c:418:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 418 | if(track->items) FREEMEMORY(space, track->items) ; | ^~ In file included from include/stringutils.h:27, from libs/annotation.c:29: libs/annotation.c: In function ‘bl_annotationmultitrackDestruct’: include/memory.h:32:27: warning: macro expands to multiple statements [-Wmultistatement-macros] 32 | #define FREEMEMORY(X,PTR) free(PTR); PTR=NULL | ^~~~ libs/annotation.c:455:20: note: in expansion of macro ‘FREEMEMORY’ 455 | if(track->items) FREEMEMORY(space, track->items) ; | ^~~~~~~~~~ libs/annotation.c:455:3: note: some parts of macro expansion are not guarded by this ‘if’ clause 455 | if(track->items) FREEMEMORY(space, track->items) ; | ^~ Building... library for source build/queryalign.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/queryalign.o libs/queryalign.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/vstack.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/vstack.o libs/vstack.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Building... library for source build/md5.o mips64el-linux-gnuabi64-gcc -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -std=c99 -g -O3 -DSORTEDUNMAPPED -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DDBGNFO -DSHOWALIGN -DDBGLEVEL=0 -DPROGNFO -Ilibs -Ilibs/sufarray -Isamtools `pkg-config --cflags htslib` -I include -c -o build/md5.o libs/md5.c Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found Linking segemehl mips64el-linux-gnuabi64-gcc build/matealign.o build/alignment.o build/nw.o build/mappingqual.o build/mapfrag.o build/filebuffer.o build/multicharseq.o build/mathematics.o build/manopt.o build/intervaltree.o build/bitvectoralg.o build/iupac.o build/splitalign.o build/fileBins.o build/sufarray.o build/gzip.o build/info.o build/brendel.o build/manout.o build/samio.o build/stringutils.o build/charsequence.o build/match.o build/sort.o build/radixsort.o build/pigeon.o build/junctions.o build/memory.o build/bedfiles.o build/container.o build/portable_endian.o build/gzidx.o build/bgzip.o build/karlin.o build/vtprogressbar.o build/kdchain.o build/fileio.o build/sw.o build/samheader.o build/bitArray.o build/segemehl_helper.o build/aluruSort.o build/vqueue.o build/bamio.o build/stack.o build/kdseed.o build/merge.o build/debug.o build/seqclip.o build/locus.o build/bitVector.o build/biofiles.o build/annotation.o build/queryalign.o build/vstack.o build/md5.o build/segemehl.o -o ./segemehl.x -lm -lpthread -lz -lncurses -L libs -lform -lmenu -L/usr/local/lib/ `pkg-config --libs htslib` -Wl,-z,relro -Wl,-z,now Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable No package 'htslib' found /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/manout.o: in function `se_openOutputDevices': ./libs/manout.c:701: undefined reference to `sam_hdr_write' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/manout.c:701: undefined reference to `sam_hdr_write' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/manout.c:709: undefined reference to `sam_hdr_write' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/manout.c:709: undefined reference to `sam_hdr_write' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/manout.o: in function `se_closeOutputDevices': ./libs/manout.c:841: undefined reference to `hts_close' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/manout.c:841: undefined reference to `hts_close' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/manout.c:842: undefined reference to `sam_hdr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/manout.o: in function `bam_hdr_destroy': /usr/include/htslib/sam.h:383: undefined reference to `sam_hdr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectionGetContext2': ./libs/bamio.c:208: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamGetContextCode': ./libs/bamio.c:240: undefined reference to `seq_nt16_table' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectionMethylSimple': ./libs/bamio.c:367: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectionPrint': ./libs/bamio.c:475: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectionAddRef': ./libs/bamio.c:494: undefined reference to `seq_nt16_table' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:496: undefined reference to `seq_nt16_table' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:498: undefined reference to `seq_nt16_table' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectionDumpRef': ./libs/bamio.c:508: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamGetQuerySeqString': ./libs/bamio.c:590: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `sam_itr_next': /usr/include/htslib/sam.h:1287: undefined reference to `hts_itr_next' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:1287: undefined reference to `hts_itr_next' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:1284: undefined reference to `hts_itr_multi_next' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:1285: undefined reference to `hts_itr_multi_next' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:1280: undefined reference to `hts_log' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:1280: undefined reference to `hts_log' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:1276: undefined reference to `hts_log' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:1276: undefined reference to `hts_log' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamMethylStringWrite': ./libs/bamio.c:643: undefined reference to `sam_format1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:643: undefined reference to `sam_format1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamMethylStringProcess': ./libs/bamio.c:701: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:703: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:708: undefined reference to `bam_aux2Z' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:708: undefined reference to `bam_aux2Z' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:727: undefined reference to `bam_cigar2rlen' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:727: undefined reference to `bam_cigar2rlen' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:748: undefined reference to `seq_nt16_table' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:752: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:752: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:752: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:752: undefined reference to `seq_nt16_str' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectionProcess': ./libs/bamio.c:834: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:835: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:836: undefined reference to `bam_aux2i' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:836: undefined reference to `bam_aux2i' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:840: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:840: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:841: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:841: undefined reference to `bam_aux_get' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:844: undefined reference to `bam_aux2i' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:844: undefined reference to `bam_aux2i' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:849: undefined reference to `bam_aux2Z' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:849: undefined reference to `bam_aux2Z' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectionAddRef': ./libs/bamio.c:494: undefined reference to `seq_nt16_table' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamCrossSectioMethylWorker': ./libs/bamio.c:1017: undefined reference to `sam_itr_queryi' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1017: undefined reference to `sam_itr_queryi' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1027: undefined reference to `faidx_fetch_seq' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1027: undefined reference to `faidx_fetch_seq' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1047: undefined reference to `hts_itr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1047: undefined reference to `hts_itr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1047: undefined reference to `hts_itr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1047: undefined reference to `hts_itr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamMethylStringWorker': ./libs/bamio.c:1078: undefined reference to `sam_itr_queryi' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1078: undefined reference to `sam_itr_queryi' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1083: undefined reference to `faidx_fetch_seq' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1083: undefined reference to `faidx_fetch_seq' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1091: undefined reference to `hts_itr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1091: undefined reference to `hts_itr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamLoadInfo': ./libs/bamio.c:1104: undefined reference to `hts_open' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1104: undefined reference to `hts_open' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1110: undefined reference to `sam_hdr_read' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1110: undefined reference to `sam_hdr_read' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1114: undefined reference to `sam_index_load' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1114: undefined reference to `sam_index_load' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1120: undefined reference to `fai_load' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1120: undefined reference to `fai_load' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamDestructInfo': ./libs/bamio.c:1132: undefined reference to `fai_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1132: undefined reference to `fai_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bam_hdr_destroy': /usr/include/htslib/sam.h:383: undefined reference to `sam_hdr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: /usr/include/htslib/sam.h:383: undefined reference to `sam_hdr_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamDestructInfo': ./libs/bamio.c:1134: undefined reference to `hts_idx_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1134: undefined reference to `hts_idx_destroy' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1135: undefined reference to `hts_close' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1135: undefined reference to `hts_close' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamGetHeader': ./libs/bamio.c:1157: undefined reference to `sam_hdr_parse' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1157: undefined reference to `sam_hdr_parse' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamSamrec2Bamrec': ./libs/bamio.c:1180: undefined reference to `bam_init1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1180: undefined reference to `bam_init1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1183: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1183: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1186: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1187: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1192: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o:./libs/bamio.c:1192: more undefined references to `ksprintf' follow /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamSamrec2Bamrec': ./libs/bamio.c:1195: undefined reference to `sam_parse1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1196: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1196: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1197: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1195: undefined reference to `sam_parse1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1200: undefined reference to `sam_parse1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1197: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1195: undefined reference to `sam_parse1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1189: undefined reference to `ksprintf' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamPrintBamrec': ./libs/bamio.c:1229: undefined reference to `sam_write1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1229: undefined reference to `sam_write1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1232: undefined reference to `bam_destroy1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1237: undefined reference to `bam_destroy1' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: build/bamio.o: in function `bl_bamOpenFile': ./libs/bamio.c:1254: undefined reference to `hts_open' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1254: undefined reference to `hts_open' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1258: undefined reference to `hts_set_cache_size' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1258: undefined reference to `hts_set_cache_size' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1258: undefined reference to `hts_set_cache_size' /usr/lib/gcc-cross/mips64el-linux-gnuabi64/9/../../../../mips64el-linux-gnuabi64/bin/ld: ./libs/bamio.c:1258: undefined reference to `hts_set_cache_size' collect2: error: ld returned 1 exit status make[2]: *** [Makefile:32: segemehl] Error 1 make[2]: Leaving directory '/<>' dh_auto_build: error: make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mips64el-linux-gnuabi64-pkg-config CXX=mips64el-linux-gnuabi64-g\+\+ CC=mips64el-linux-gnuabi64-gcc all returned exit code 2 make[1]: *** [debian/rules:9: override_dh_auto_build] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:6: build-arch] Error 2 dpkg-buildpackage: error: debian/rules build-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2020-03-14T16:56:42Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 8092 Build-Time: 30 Distribution: unstable Fail-Stage: build Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 19 Job: segemehl_0.3.4-2 Machine Architecture: amd64 Package: segemehl Package-Time: 59 Source-Version: 0.3.4-2 Space: 8092 Status: attempted Version: 0.3.4-2 -------------------------------------------------------------------------------- Finished at 2020-03-14T16:56:42Z Build needed 00:00:59, 8092k disk space