sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | seqtk 1.3-3 (mipsel) Wed, 19 Oct 2022 21:10:07 +0000 | +==============================================================================+ Package: seqtk Version: 1.3-3 Source Version: 1.3-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-fe9aed3b-6a4e-4d36-b6cd-e893a8cb5fda' with '<>' I: NOTICE: Log filtering will replace 'build/seqtk-OjasN0/resolver-QprQG8' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [161 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-10-19-2015.34-F-2022-10-19-0209.37.pdiff [82.0 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-10-19-2015.34-F-2022-10-19-0209.37.pdiff [116 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2022-10-19-2015.34-F-2022-10-19-0209.37.pdiff [82.0 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2022-10-19-2015.34-F-2022-10-19-0209.37.pdiff [116 kB] Get:6 http://localhost:3142/debian sid/main mipsel Packages [8981 kB] Fetched 9467 kB in 2s (3922 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: libperl5.36 perl-modules-5.36 The following packages will be upgraded: perl perl-base 2 upgraded, 2 newly installed, 0 to remove and 0 not upgraded. Need to get 8871 kB of archives. After this operation, 47.8 MB of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 perl-modules-5.36 all 5.36.0-4 [2815 kB] Get:2 http://localhost:3142/debian sid/main amd64 libperl5.36 amd64 5.36.0-4 [4211 kB] Get:3 http://localhost:3142/debian sid/main amd64 perl amd64 5.36.0-4 [238 kB] Get:4 http://localhost:3142/debian sid/main amd64 perl-base amd64 5.36.0-4 [1607 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 8871 kB in 0s (177 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13720 files and directories currently installed.) Preparing to unpack .../perl_5.36.0-4_amd64.deb ... Unpacking perl (5.36.0-4) over (5.34.0-5) ... Selecting previously unselected package perl-modules-5.36. Preparing to unpack .../perl-modules-5.36_5.36.0-4_all.deb ... Unpacking perl-modules-5.36 (5.36.0-4) ... Selecting previously unselected package libperl5.36:amd64. Preparing to unpack .../libperl5.36_5.36.0-4_amd64.deb ... Unpacking libperl5.36:amd64 (5.36.0-4) ... Preparing to unpack .../perl-base_5.36.0-4_amd64.deb ... Unpacking perl-base (5.36.0-4) over (5.34.0-5) ... Setting up perl-base (5.36.0-4) ... Setting up perl-modules-5.36 (5.36.0-4) ... Setting up libperl5.36:amd64 (5.36.0-4) ... Setting up perl (5.36.0-4) ... Processing triggers for libc-bin (2.35-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'seqtk' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/seqtk.git Please use: git clone https://salsa.debian.org/med-team/seqtk.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 27.5 kB of source archives. Get:1 http://localhost:3142/debian sid/main seqtk 1.3-3 (dsc) [1951 B] Get:2 http://localhost:3142/debian sid/main seqtk 1.3-3 (tar) [21.2 kB] Get:3 http://localhost:3142/debian sid/main seqtk 1.3-3 (diff) [4332 B] Fetched 27.5 kB in 0s (543 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/seqtk-OjasN0/seqtk-1.3' with '<>' I: NOTICE: Log filtering will replace 'build/seqtk-OjasN0' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64, libc-dev:mipsel, libstdc++-dev:mipsel dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [410 B] Get:5 copy:/<>/apt_archive ./ Packages [500 B] Fetched 1867 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils cpp-12-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-11-base:mipsel gcc-12-base:mipsel gcc-12-cross-base-mipsen gcc-12-mipsel-linux-gnu gcc-12-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libc6:mipsel libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mipsel libgcc-12-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgomp1:mipsel libgomp1-mipsel-cross libgssapi-krb5-2:mipsel libicu71 libio-string-perl libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:mipsel libnsl2:mipsel libpipeline1 libssl3:mipsel libstdc++-11-dev:mipsel libstdc++-12-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db po-debconf sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch g++-12-multilib-mipsel-linux-gnu gcc-12-doc gcc-12-multilib-mipsel-linux-gnu manpages-dev flex bison gdb-mipsel-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel libnss-nis:mipsel libnss-nisplus:mipsel manpages-dev:mipsel krb5-doc:mipsel krb5-user:mipsel libstdc++-11-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mipsel libarchive-cpio-perl krb5-locales:mipsel libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mipsel-linux-gnu bsdextrautils cpp-12-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-11-base:mipsel gcc-12-base:mipsel gcc-12-cross-base-mipsen gcc-12-mipsel-linux-gnu gcc-12-mipsel-linux-gnu-base gcc-mipsel-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libatomic1-mipsel-cross libc6:mipsel libc6-dev:mipsel libc6-dev-mipsel-cross libc6-mipsel-cross libcom-err2:mipsel libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mipsel libcrypt1:mipsel libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mipsel libgcc-12-dev-mipsel-cross libgcc-s1:mipsel libgcc-s1-mipsel-cross libgomp1:mipsel libgomp1-mipsel-cross libgssapi-krb5-2:mipsel libicu71 libio-string-perl libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:mipsel libnsl2:mipsel libpipeline1 libssl3:mipsel libstdc++-11-dev:mipsel libstdc++-12-dev-mipsel-cross libstdc++6:mipsel libstdc++6-mipsel-cross libsub-override-perl libtirpc-dev:mipsel libtirpc3:mipsel libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mipsel linux-libc-dev-mipsel-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:mipsel sensible-utils ucf zlib1g:mipsel zlib1g-dev:mipsel 0 upgraded, 92 newly installed, 0 to remove and 0 not upgraded. Need to get 74.3 MB of archives. After this operation, 298 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-4+b3 [15.1 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-9 [175 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-1.1+b1 [85.9 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.6-3 [39.4 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.0-1+b1 [1342 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-1 [291 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-9 [510 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-mipsel-linux-gnu amd64 2.39-7cross3 [2792 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-mipsel-linux-gnu-base amd64 12.2.0-5cross2 [36.5 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-mipsel-linux-gnu amd64 12.2.0-5cross2 [8093 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-mipsel-linux-gnu amd64 4:12.2.0-4 [3284 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base-mipsen all 12.2.0-5cross2 [32.3 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-mipsel-cross all 2.35-3cross2 [977 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-mipsel-cross all 12.2.0-5cross2 [46.0 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-mipsel-cross all 12.2.0-5cross2 [105 kB] Get:28 http://localhost:3142/debian sid/main amd64 libatomic1-mipsel-cross all 12.2.0-5cross2 [6456 B] Get:29 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-mipsel-cross all 12.2.0-5cross2 [267 kB] Get:30 http://localhost:3142/debian sid/main amd64 gcc-12-mipsel-linux-gnu amd64 12.2.0-5cross2 [15.9 MB] Get:31 http://localhost:3142/debian sid/main amd64 gcc-mipsel-linux-gnu amd64 4:12.2.0-4 [1452 B] Get:32 http://localhost:3142/debian sid/main amd64 libstdc++6-mipsel-cross all 12.2.0-5cross2 [498 kB] Get:33 http://localhost:3142/debian sid/main amd64 linux-libc-dev-mipsel-cross all 5.19.11-1cross2 [1753 kB] Get:34 http://localhost:3142/debian sid/main amd64 libc6-dev-mipsel-cross all 2.35-3cross2 [1400 kB] Get:35 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-mipsel-cross all 12.2.0-5cross2 [2034 kB] Get:36 http://localhost:3142/debian sid/main amd64 g++-12-mipsel-linux-gnu amd64 12.2.0-5cross2 [9016 kB] Get:37 http://localhost:3142/debian sid/main amd64 g++-mipsel-linux-gnu amd64 4:12.2.0-4 [1176 B] Get:38 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:39 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:40 http://localhost:3142/debian sid/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:41 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1+b1 [708 kB] Get:42 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:43 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:45 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:46 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:47 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:48 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:49 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:51 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:52 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:53 http://localhost:3142/debian sid/main amd64 crossbuild-essential-mipsel all 12.9 [6728 B] Get:54 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.10 [79.8 kB] Get:55 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-4 [526 kB] Get:56 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:57 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:58 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:59 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:60 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:61 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.187-4 [179 kB] Get:62 http://localhost:3142/debian sid/main amd64 dwz amd64 0.14+20220924-2 [109 kB] Get:63 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-9 [1315 kB] Get:64 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:65 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:66 http://localhost:3142/debian sid/main amd64 debhelper all 13.10 [940 kB] Get:67 http://localhost:3142/debian sid/main mipsel gcc-11-base mipsel 11.3.0-8 [209 kB] Get:68 http://localhost:3142/debian sid/main mipsel gcc-12-base mipsel 12.2.0-5 [208 kB] Get:69 http://localhost:3142/debian sid/main mipsel libgcc-s1 mipsel 12.2.0-5 [45.7 kB] Get:70 http://localhost:3142/debian sid/main mipsel libc6 mipsel 2.35-3 [2284 kB] Get:71 http://localhost:3142/debian sid/main mipsel libatomic1 mipsel 12.2.0-5 [6708 B] Get:72 http://localhost:3142/debian sid/main mipsel linux-libc-dev mipsel 6.0.2-1 [1640 kB] Get:73 http://localhost:3142/debian sid/main mipsel libcrypt1 mipsel 1:4.4.28-2 [113 kB] Get:74 http://localhost:3142/debian sid/main mipsel libcrypt-dev mipsel 1:4.4.28-2 [144 kB] Get:75 http://localhost:3142/debian sid/main mipsel libcom-err2 mipsel 1.46.6~rc1-1+b1 [14.5 kB] Get:76 http://localhost:3142/debian sid/main mipsel libkrb5support0 mipsel 1.20-1+b1 [31.3 kB] Get:77 http://localhost:3142/debian sid/main mipsel libk5crypto3 mipsel 1.20-1+b1 [83.9 kB] Get:78 http://localhost:3142/debian sid/main mipsel libkeyutils1 mipsel 1.6.3-1 [15.2 kB] Get:79 http://localhost:3142/debian sid/main mipsel libssl3 mipsel 3.0.5-4 [1539 kB] Get:80 http://localhost:3142/debian sid/main mipsel libkrb5-3 mipsel 1.20-1+b1 [302 kB] Get:81 http://localhost:3142/debian sid/main mipsel libgssapi-krb5-2 mipsel 1.20-1+b1 [117 kB] Get:82 http://localhost:3142/debian sid/main mipsel libtirpc3 mipsel 1.3.3+ds-1 [74.3 kB] Get:83 http://localhost:3142/debian sid/main mipsel libnsl2 mipsel 1.3.0-2 [35.2 kB] Get:84 http://localhost:3142/debian sid/main mipsel libtirpc-dev mipsel 1.3.3+ds-1 [197 kB] Get:85 http://localhost:3142/debian sid/main mipsel libnsl-dev mipsel 1.3.0-2 [69.1 kB] Get:86 http://localhost:3142/debian sid/main mipsel libc6-dev mipsel 2.35-3 [1404 kB] Get:87 http://localhost:3142/debian sid/main mipsel libgomp1 mipsel 12.2.0-5 [107 kB] Get:88 http://localhost:3142/debian sid/main mipsel libgcc-11-dev mipsel 11.3.0-8 [254 kB] Get:89 http://localhost:3142/debian sid/main mipsel libstdc++6 mipsel 12.2.0-5 [541 kB] Get:90 http://localhost:3142/debian sid/main mipsel libstdc++-11-dev mipsel 11.3.0-8 [1970 kB] Get:91 http://localhost:3142/debian sid/main mipsel zlib1g mipsel 1:1.2.11.dfsg-4.1 [88.3 kB] Get:92 http://localhost:3142/debian sid/main mipsel zlib1g-dev mipsel 1:1.2.11.dfsg-4.1 [190 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 74.3 MB in 0s (195 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15646 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-4+b3_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.41-4_amd64.deb ... Unpacking libmagic-mgc (1:5.41-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.41-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.41-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.41-4_amd64.deb ... Unpacking file (1:5.41-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-9_amd64.deb ... Unpacking gettext-base (0.21-9) ... 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Setting up libatomic1-mipsel-cross (12.2.0-5cross2) ... Setting up file (1:5.41-4) ... Setting up libyaml-perl (1.30-2) ... Setting up gcc-12-mipsel-linux-gnu-base:amd64 (12.2.0-5cross2) ... Setting up gcc-12-base:mipsel (12.2.0-5) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up binutils-mipsel-linux-gnu (2.39-7cross3) ... Setting up libgomp1-mipsel-cross (12.2.0-5cross2) ... Setting up autopoint (0.21-9) ... Setting up autoconf (2.71-2) ... Setting up linux-libc-dev-mipsel-cross (5.19.11-1cross2) ... Setting up sensible-utils (0.0.17) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up cpp-12-mipsel-linux-gnu (12.2.0-5cross2) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libelf1:amd64 (0.187-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1+b1) ... Setting up liblocale-gettext-perl (1.07-4+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up gettext (0.21-9) ... Setting up libc6-dev-mipsel-cross (2.35-3cross2) ... Setting up libtool (2.4.7-4) ... Setting up libgcc-s1-mipsel-cross (12.2.0-5cross2) ... Setting up libgcc-12-dev-mipsel-cross (12.2.0-5cross2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up cpp-mipsel-linux-gnu (4:12.2.0-4) ... Setting up ucf (3.0043) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14+20220924-2) ... Setting up groff-base (1.22.4-8) ... Setting up gcc-12-mipsel-linux-gnu (12.2.0-5cross2) ... Setting up libstdc++6-mipsel-cross (12.2.0-5cross2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.0-1+b1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Setting up gcc-mipsel-linux-gnu (4:12.2.0-4) ... Setting up libstdc++-12-dev-mipsel-cross (12.2.0-5cross2) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / grep: warning: stray \ before / Setting up debhelper (13.10) ... Setting up g++-12-mipsel-linux-gnu (12.2.0-5cross2) ... Setting up g++-mipsel-linux-gnu (4:12.2.0-4) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-mipsel (12.9) ... Setting up libgcc-s1:mipsel (12.2.0-5) ... Setting up libc6:mipsel (2.35-3) ... Setting up libstdc++6:mipsel (12.2.0-5) ... Setting up libkeyutils1:mipsel (1.6.3-1) ... Setting up zlib1g:mipsel (1:1.2.11.dfsg-4.1) ... Setting up libcrypt1:mipsel (1:4.4.28-2) ... Setting up libcom-err2:mipsel (1.46.6~rc1-1+b1) ... Setting up libgomp1:mipsel (12.2.0-5) ... Setting up libkrb5support0:mipsel (1.20-1+b1) ... Setting up libatomic1:mipsel (12.2.0-5) ... Setting up libk5crypto3:mipsel (1.20-1+b1) ... Setting up libgcc-11-dev:mipsel (11.3.0-8) ... Setting up libcrypt-dev:mipsel (1:4.4.28-2) ... Setting up libssl3:mipsel (3.0.5-4) ... Setting up libkrb5-3:mipsel (1.20-1+b1) ... Setting up libgssapi-krb5-2:mipsel (1.20-1+b1) ... Setting up libtirpc3:mipsel (1.3.3+ds-1) ... Setting up libtirpc-dev:mipsel (1.3.3+ds-1) ... Setting up libnsl2:mipsel (1.3.0-2) ... Setting up libnsl-dev:mipsel (1.3.0-2) ... Setting up libc6-dev:mipsel (2.35-3) ... Setting up libstdc++-11-dev:mipsel (11.3.0-8) ... Setting up zlib1g-dev:mipsel (1:1.2.11.dfsg-4.1) ... Setting up sbuild-build-depends-main-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.35-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-18-amd64 #1 SMP Debian 5.10.140-1 (2022-09-02) amd64 (x86_64) Toolchain package versions: binutils_2.39-8 dpkg-dev_1.21.9 g++-11_11.3.0-8 g++-12_12.2.0-5 gcc-11_11.3.0-8 gcc-12_12.2.0-5 libc6-dev_2.35-3 libstdc++-11-dev_11.3.0-8 libstdc++-12-dev_12.2.0-5 libstdc++-12-dev-mipsel-cross_12.2.0-5cross2 libstdc++6_12.2.0-5 libstdc++6-mipsel-cross_12.2.0-5cross2 linux-libc-dev_6.0.2-1 Package versions: adduser_3.129 apt_2.5.3+b1 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.3 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util-linux-extra_2.38.1-1.1+b1 xz-utils_5.2.5-2.1 zlib1g_1:1.2.11.dfsg-4.1 zlib1g-dev_1:1.2.11.dfsg-4.1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: seqtk Binary: seqtk Architecture: any Version: 1.3-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Brad Chapman Homepage: https://github.com/lh3/seqtk Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/seqtk Vcs-Git: https://salsa.debian.org/med-team/seqtk.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: seqtk deb science optional arch=any Checksums-Sha1: a3b3d5b0962b82cafff5af028ca72e4d83b77426 21196 seqtk_1.3.orig.tar.gz b4128a8ef72004651b3056af183c7332da90f7ee 4332 seqtk_1.3-3.debian.tar.xz Checksums-Sha256: 5a1687d65690f2f7fa3f998d47c3c5037e792f17ce119dab52fff3cfdca1e563 21196 seqtk_1.3.orig.tar.gz 0e205da4394f8e0ccf0b4f9a14a78d82f959d54cc8d48c82727f4ef19281e4d4 4332 seqtk_1.3-3.debian.tar.xz Files: 39a499431a10fe2412925a53ecfbab2b 21196 seqtk_1.3.orig.tar.gz 8e5eb2c9827ee6723d324f069f93adbe 4332 seqtk_1.3-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmMxZlkRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFr2g/8CK0cvfRXLxuPNoNLBCcn6S+BmDaVtshJ Pi1gJrmxoBRhRX3tpUxzkJRBs5TAxoKeyZESMNtreTiDavO3JfbaTi5usXSNKjkF 2163OnEfiiCxkvALLmM/NL9qw6et9uYJeV1OJOh5tfVsFXAyV8qrvm/INxrYSh/b BIik2kia9ItH9PF7TP8EdrlD19zyNeKo0RJreQHf1llHuJwH/Edmq4ftdTxEu6LT NYYo0E3BCy04DXdCwVGIyKjESRSH/1VMF2JvOAHpCf8OSDm7ZmyjnZSyk4FDSJFP hovLp36su7LfilPTLi25E1yepAJxUxeIk+qEen0NuNisjAPKOYhQXPCF7BnrWam2 GuuAOGbeka+XD1hfv1BrtDd0n86eY8W0WDuPLGaZd4rAORYt5+5UzxcO7TNKDM7J aQoetnQVgDw4VwdMhqS8Ea5CJpbXSq9V9smBfeogiNkRX1Holh3S2CiSvvk6WLCV mJKDtz/xFHAkpiAscwoL20FMKn+2FWmNSO6DRh4clm9ZdaIm2/tyZ+dQHAb6s2Cb V9JQNC59h1HfXvNt41VBGmteNI4QRlXJqJuIHx6gK9ORiJ42rYP9GuT6xNaeYFdJ wzn89VppS8F4+X6ynqzzHqcE3eNbLKAv6VyNbduN2I9TfddsYLoAteXukONSsKEt uIdsMRmZuTk= =v+tv -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.aUcazcV1/trustedkeys.kbx': General error gpgv: Signature made Mon Sep 26 08:44:09 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./seqtk_1.3-3.dsc dpkg-source: info: extracting seqtk in /<> dpkg-source: info: unpacking seqtk_1.3.orig.tar.gz dpkg-source: info: unpacking seqtk_1.3-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-fe9aed3b-6a4e-4d36-b6cd-e893a8cb5fda SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -amipsel -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package seqtk dpkg-buildpackage: info: source version 1.3-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -fr gmon.out *.o ext/*.o a.out seqtk trimadap *~ *.a *.dSYM session* make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- CFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mipsel-linux-gnu-pkg-config CXX=mipsel-linux-gnu-g\+\+ CC=mipsel-linux-gnu-gcc "CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security" make[2]: Entering directory '/<>' mipsel-linux-gnu-gcc -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security seqtk.c -o seqtk -lz -lm -Wl,-z,relro -Wl,-z,now seqtk.c: In function ‘stk_subseq’: seqtk.c:587:71: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 587 | fprintf(stderr, "[subseq] %s: %d >= %ld\n", seq->name.s, beg, seq->seq.l); | ~~^ ~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d seqtk.c: In function ‘stk_mergefa’: seqtk.c:667:74: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 667 | fprintf(stderr, "[%s] Unequal sequence length: %ld != %ld\n", __func__, seq[0]->seq.l, seq[1]->seq.l); | ~~^ ~~~~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d seqtk.c:667:81: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 667 | fprintf(stderr, "[%s] Unequal sequence length: %ld != %ld\n", __func__, seq[0]->seq.l, seq[1]->seq.l); | ~~^ ~~~~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d seqtk.c: In function ‘stk_famask’: seqtk.c:750:74: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 4 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 750 | fprintf(stderr, "[%s] Unequal sequence length: %ld != %ld\n", __func__, seq[0]->seq.l, seq[1]->seq.l); | ~~^ ~~~~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d seqtk.c:750:81: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 5 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 750 | fprintf(stderr, "[%s] Unequal sequence length: %ld != %ld\n", __func__, seq[0]->seq.l, seq[1]->seq.l); | ~~^ ~~~~~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d seqtk.c: In function ‘stk_kfreq’: seqtk.c:1563:31: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 1563 | printf("%s\t%ld\t%c\t%d\t%d\n", ks->name.s, ks->seq.l, "+-"[which], cnt_nei[which], cnt[which]); | ~~^ ~~~~~~~~~ | | | | long int size_t {aka unsigned int} | %d make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' echo "Ignore broken Makefile" Ignore broken Makefile make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'seqtk' in '../seqtk_1.3-3_mipsel.deb'. dpkg-deb: building package 'seqtk-dbgsym' in '../seqtk-dbgsym_1.3-3_mipsel.deb'. dpkg-genbuildinfo --build=any -O../seqtk_1.3-3_mipsel.buildinfo dpkg-genchanges --build=any -O../seqtk_1.3-3_mipsel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-10-19T21:10:32Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ seqtk_1.3-3_mipsel.changes: --------------------------- Format: 1.8 Date: Mon, 26 Sep 2022 09:56:46 +0200 Source: seqtk Binary: seqtk seqtk-dbgsym Built-For-Profiles: cross nocheck Architecture: mipsel Version: 1.3-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: seqtk - Fast and lightweight tool for processing sequences in the FASTA o Closes: 1020753 Changes: seqtk (1.3-3) unstable; urgency=medium . [ Vagrant Cascadian ] * Pass default CFLAGS to dh_auto_build. Closes: #1020753 . [ Andreas Tille ] * Standards-Version: 4.6.1 (routine-update) * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. Checksums-Sha1: 99b136543c93e37437d230cdb1c5a18c745aece1 60524 seqtk-dbgsym_1.3-3_mipsel.deb c0ff2a21a84755d6c340be5eeb135ae5f4dbf576 5241 seqtk_1.3-3_mipsel.buildinfo 371afe1ac4876727d05486322193d6dd7164fcca 29532 seqtk_1.3-3_mipsel.deb Checksums-Sha256: fced1b239c1f6cef1e6fad02633020b07724a03dc95ec7289d1db120b69a3551 60524 seqtk-dbgsym_1.3-3_mipsel.deb fdd9c7d77c05a5cb64a48e100faa8df190e5a25320dd2c103727cbeb40613a6e 5241 seqtk_1.3-3_mipsel.buildinfo f14c387e357beebdf3fcadecb410dcec60e22c20c70e6446bafd7a095da2d8ea 29532 seqtk_1.3-3_mipsel.deb Files: e35221c8293b292ea010c79449f9e5bc 60524 debug optional seqtk-dbgsym_1.3-3_mipsel.deb d12a9a8088dec4f005b990a0c1d4a466 5241 science optional seqtk_1.3-3_mipsel.buildinfo 4d1cfaf4640f231a3aac5b61f1e5876a 29532 science optional seqtk_1.3-3_mipsel.deb /<>/seqtk_1.3-3_mipsel.changes.new could not be renamed to /<>/seqtk_1.3-3_mipsel.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: seqtk Binary: seqtk seqtk-dbgsym Architecture: mipsel Version: 1.3-3 Checksums-Md5: e35221c8293b292ea010c79449f9e5bc 60524 seqtk-dbgsym_1.3-3_mipsel.deb 4d1cfaf4640f231a3aac5b61f1e5876a 29532 seqtk_1.3-3_mipsel.deb Checksums-Sha1: 99b136543c93e37437d230cdb1c5a18c745aece1 60524 seqtk-dbgsym_1.3-3_mipsel.deb 371afe1ac4876727d05486322193d6dd7164fcca 29532 seqtk_1.3-3_mipsel.deb Checksums-Sha256: fced1b239c1f6cef1e6fad02633020b07724a03dc95ec7289d1db120b69a3551 60524 seqtk-dbgsym_1.3-3_mipsel.deb f14c387e357beebdf3fcadecb410dcec60e22c20c70e6446bafd7a095da2d8ea 29532 seqtk_1.3-3_mipsel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 19 Oct 2022 21:10:32 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-9), autotools-dev (= 20220109.1), base-files (= 12.3), base-passwd (= 3.6.1), bash (= 5.2-1), binutils (= 2.39-8), binutils-common (= 2.39-8), binutils-x86-64-linux-gnu (= 2.39-8), bsdextrautils (= 2.38.1-1.1+b1), bsdutils (= 1:2.38.1-1.1+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:12.2.0-1), cpp-11 (= 11.3.0-8), cpp-12 (= 12.2.0-5), dash (= 0.5.11+git20210903+057cd650a4ed-9), debconf (= 1.5.79), debhelper (= 13.10), debianutils (= 5.7-0.3), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.8-1), dpkg (= 1.21.9+b1), dpkg-dev (= 1.21.9), dwz (= 0.14+20220924-2), file (= 1:5.41-4), findutils (= 4.9.0-3), g++ (= 4:12.2.0-1), g++-12 (= 12.2.0-5), gcc (= 4:12.2.0-1), gcc-11 (= 11.3.0-8), gcc-11-base (= 11.3.0-8), gcc-12 (= 12.2.0-5), gcc-12-base (= 12.2.0-5), gettext (= 0.21-9), gettext-base (= 0.21-9), grep (= 3.8-2), groff-base (= 1.22.4-8), gzip (= 1.12-1), hostname (= 3.23), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-8), libasan8 (= 12.2.0-5), libatomic1 (= 12.2.0-5), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1.1), libaudit1 (= 1:3.0.7-1.1+b1), libbinutils (= 2.39-8), libblkid1 (= 2.38.1-1.1+b1), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.35-3), libc-dev-bin (= 2.35-3), libc6 (= 2.35-3), libc6-dev (= 2.35-3), libcap-ng0 (= 0.8.3-1+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 12.2.0-5), libcom-err2 (= 1.46.6~rc1-1+b1), libcrypt-dev (= 1:4.4.28-2), libcrypt1 (= 1:4.4.28-2), libctf-nobfd0 (= 2.39-8), libctf0 (= 2.39-8), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.264), libdebhelper-perl (= 13.10), libdpkg-perl (= 1.21.9), libelf1 (= 0.187-4), libfile-find-rule-perl (= 0.34-2), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.3.0-8), libgcc-12-dev (= 12.2.0-5), libgcc-s1 (= 12.2.0-5), libgcrypt20 (= 1.10.1-2), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1), libgomp1 (= 12.2.0-5), libgpg-error0 (= 1.45-2), libgprofng0 (= 2.39-8), libgssapi-krb5-2 (= 1.20-1+b1), libicu71 (= 71.1-3), libisl23 (= 0.25-1), libitm1 (= 12.2.0-5), libk5crypto3 (= 1.20-1+b1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20-1+b1), libkrb5support0 (= 1.20-1+b1), liblsan0 (= 12.2.0-5), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.2.5-2.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38.1-1.1+b1), libmpc3 (= 1.2.1-2), libmpfr6 (= 4.1.0-3), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-2), libpam-modules (= 1.5.2-5), libpam-modules-bin (= 1.5.2-5), libpam-runtime (= 1.5.2-5), libpam0g (= 1.5.2-5), libpcre2-8-0 (= 10.40-1), libperl5.36 (= 5.36.0-4), libpipeline1 (= 1.5.6-3), libquadmath0 (= 12.2.0-5), libseccomp2 (= 2.5.4-1+b1), libselinux1 (= 3.4-1+b2), libsmartcols1 (= 2.38.1-1.1+b1), libssl3 (= 3.0.5-4), libstdc++-12-dev (= 12.2.0-5), libstdc++6 (= 12.2.0-5), libsub-override-perl (= 0.09-4), libsystemd0 (= 251.6-1), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-8), libtsan2 (= 12.2.0-5), libubsan1 (= 12.2.0-5), libuchardet0 (= 0.0.7-1), libudev1 (= 251.6-1), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-1.1+b1), libxml2 (= 2.9.14+dfsg-1+b1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 6.0.2-1), login (= 1:4.12.3+dfsg1-1), m4 (= 1.4.19-1), make (= 4.3-4.1), man-db (= 2.11.0-1+b1), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), patch (= 2.7.6-7), perl (= 5.36.0-4), perl-base (= 5.36.0-4), perl-modules-5.36 (= 5.36.0-4), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.05-6), tar (= 1.34+dfsg-1), usrmerge (= 33), util-linux (= 2.38.1-1.1+b1), util-linux-extra (= 2.38.1-1.1+b1), xz-utils (= 5.2.5-2.1), zlib1g (= 1:1.2.11.dfsg-4.1), zlib1g-dev (= 1:1.2.11.dfsg-4.1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1664179006" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ seqtk-dbgsym_1.3-3_mipsel.deb ----------------------------- new Debian package, version 2.0. size 60524 bytes: control archive=532 bytes. 358 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: seqtk-dbgsym Source: seqtk Version: 1.3-3 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 74 Depends: seqtk (= 1.3-3) Section: debug Priority: optional Description: debug symbols for seqtk Build-Ids: 93ac35061dd7f8367bd8f137c3536169e00e8a84 drwxr-xr-x root/root 0 2022-09-26 07:56 ./ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/lib/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/lib/debug/.build-id/93/ -rw-r--r-- root/root 65112 2022-09-26 07:56 ./usr/lib/debug/.build-id/93/ac35061dd7f8367bd8f137c3536169e00e8a84.debug drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-09-26 07:56 ./usr/share/doc/seqtk-dbgsym -> seqtk seqtk_1.3-3_mipsel.deb ---------------------- new Debian package, version 2.0. size 29532 bytes: control archive=1044 bytes. 783 bytes, 18 lines control 597 bytes, 9 lines md5sums Package: seqtk Version: 1.3-3 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 88 Depends: libc6 (>= 2.34), zlib1g (>= 1:1.1.4) Section: science Priority: optional Homepage: https://github.com/lh3/seqtk Description: Fast and lightweight tool for processing sequences in the FASTA or FASTQ format Currently, seqtk supports quality based trimming with the phred algorithm, converting fastq to fasta, reverse complementing sequences, extracting or masking subsequences in regions given in a BED/name list file, and more. It contains a subsampling module to sample exactly n sequences or a fraction of sequences. . Seqtk supports both fasta and fastq input files, which can be optionally gzip compressed. drwxr-xr-x root/root 0 2022-09-26 07:56 ./ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/bin/ -rwxr-xr-x root/root 69556 2022-09-26 07:56 ./usr/bin/seqtk drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/doc/seqtk/ -rw-r--r-- root/root 261 2022-09-26 07:56 ./usr/share/doc/seqtk/README.test -rw-r--r-- root/root 511 2022-09-26 07:56 ./usr/share/doc/seqtk/changelog.Debian.gz -rw-r--r-- root/root 1341 2022-09-26 07:56 ./usr/share/doc/seqtk/copyright -rw-r--r-- root/root 599 2022-09-26 07:56 ./usr/share/doc/seqtk/run-unit-test drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/doc/seqtk/test_data/ -rw-r--r-- root/root 605 2022-09-26 07:56 ./usr/share/doc/seqtk/test_data/in.fa -rw-r--r-- root/root 1210 2022-09-26 07:56 ./usr/share/doc/seqtk/test_data/in.fq -rw-r--r-- root/root 60 2022-09-26 07:56 ./usr/share/doc/seqtk/test_data/name.lst drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/man/ drwxr-xr-x root/root 0 2022-09-26 07:56 ./usr/share/man/man1/ -rw-r--r-- root/root 620 2022-09-26 07:56 ./usr/share/man/man1/seqtk.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [541 B] Get:5 copy:/<>/apt_archive ./ Packages [626 B] Fetched 2130 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: libapt-pkg-perl : Depends: perlapi-5.34.0 but it is not installable libberkeleydb-perl : Depends: perlapi-5.34.0 but it is not installable libclone-perl : Depends: perlapi-5.34.0 but it is not installable libcpanel-json-xs-perl : Depends: perlapi-5.34.0 but it is not installable liblist-moreutils-xs-perl : Depends: perlapi-5.34.0 but it is not installable libnet-ssleay-perl : Depends: perlapi-5.34.0 but it is not installable libnetaddr-ip-perl : Depends: perlapi-5.34.0 but it is not installable libparams-classify-perl : Depends: libdevel-callchecker-perl but it is not going to be installed Depends: perlapi-5.34.0 but it is not installable libparams-util-perl : Depends: perlapi-5.34.0 but it is not installable libsereal-decoder-perl : Depends: perlapi-5.34.0 but it is not installable libsereal-encoder-perl : Depends: perlapi-5.34.0 but it is not installable libsyntax-keyword-try-perl : Depends: perlapi-5.34.0 but it is not installable libtext-xslate-perl : Depends: perlapi-5.34.0 but it is not installable Depends: libdata-messagepack-perl but it is not going to be installed Depends: libmouse-perl but it is not going to be installed libtime-moment-perl : Depends: perlapi-5.34.0 but it is not installable libunicode-utf8-perl : Depends: perlapi-5.34.0 but it is not installable E: Unable to correct problems, you have held broken packages. apt-get failed. E: Package installation failed Not removing build depends: cloned chroot in use +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 708 Build-Time: 4 Distribution: unstable Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 10 Job: seqtk_1.3-3 Lintian: error Machine Architecture: amd64 Package: seqtk Package-Time: 25 Source-Version: 1.3-3 Space: 708 Status: successful Version: 1.3-3 -------------------------------------------------------------------------------- Finished at 2022-10-19T21:10:32Z Build needed 00:00:25, 708k disk space