sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | sibelia 3.0.7+dfsg-3 (s390x) Sat, 07 Aug 2021 08:32:10 +0000 | +==============================================================================+ Package: sibelia Version: 3.0.7+dfsg-3 Source Version: 3.0.7+dfsg-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-077dbf80-29f5-499f-ba6c-06ebc57dbbc2' with '<>' I: NOTICE: Log filtering will replace 'build/sibelia-mX91jB/resolver-NXFcD8' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://debian.oregonstate.edu/debian unstable InRelease Get:2 http://debian.oregonstate.edu/debian unstable/main s390x Packages [8298 kB] Fetched 8298 kB in 2s (4827 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'sibelia' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/sibelia.git Please use: git clone https://salsa.debian.org/med-team/sibelia.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 4846 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main sibelia 3.0.7+dfsg-3 (dsc) [2132 B] Get:2 http://debian.oregonstate.edu/debian unstable/main sibelia 3.0.7+dfsg-3 (tar) [4833 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main sibelia 3.0.7+dfsg-3 (diff) [10.2 kB] Fetched 4846 kB in 0s (31.4 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/sibelia-mX91jB/sibelia-3.0.7+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/sibelia-mX91jB' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), cmake, libdivsufsort-dev, libboost-dev, libseqan2-dev, libtclap-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 12), cmake, libdivsufsort-dev, libboost-dev, libseqan2-dev, libtclap-dev, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [436 B] Get:5 copy:/<>/apt_archive ./ Packages [526 B] Fetched 1919 B in 0s (75.8 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential cmake cmake-data cpp-10-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-base:s390x gcc-10-cross-base gcc-10-s390x-linux-gnu gcc-10-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan6:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libboost-dev:s390x libboost1.74-dev:s390x libbrotli1 libbrotli1:s390x libbz2-1.0:s390x libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libcurl3-gnutls:s390x libcurl4 libcurl4-gnutls-dev:s390x libdb5.3:s390x libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:s390x libdeflate0:s390x libdivsufsort-dev:s390x libdivsufsort3:s390x libdpkg-perl libelf1 libexpat1 libffi7:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:s390x libgcc-10-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgmp10:s390x libgnutls30:s390x libgomp1:s390x libgomp1-s390x-cross libgssapi-krb5-2:s390x libhogweed6:s390x libhts-dev:s390x libhts3:s390x libicu67 libidn2-0:s390x libio-string-perl libitm1:s390x libitm1-s390x-cross libjsoncpp24 libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x libldap-2.4-2 libldap-2.4-2:s390x liblocale-gettext-perl liblzma-dev:s390x liblzma5:s390x libmagic-mgc libmagic1 libncurses6 libnettle8:s390x libnghttp2-14 libnghttp2-14:s390x libnsl-dev libnsl-dev:s390x libnsl2:s390x libp11-kit0:s390x libperl5.32 libpipeline1 libprocps8 libpsl5 libpsl5:s390x librhash0 librtmp1 librtmp1:s390x libsasl2-2 libsasl2-2:s390x libsasl2-modules-db libsasl2-modules-db:s390x libseqan2-dev libsigsegv2 libssh2-1 libssh2-1:s390x libssl1.1:s390x libstdc++-10-dev libstdc++-10-dev:s390x libstdc++-10-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtasn1-6:s390x libtclap-dev:s390x libtirpc-dev libtirpc-dev:s390x libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libunistring2:s390x libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db perl perl-modules-5.32 po-debconf procps sensible-utils ucf zlib1g:s390x zlib1g-dev:s390x Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc ninja-build gcc-10-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-10-multilib gcc-10-doc g++-10-multilib-s390x-linux-gnu gcc-10-multilib-s390x-linux-gnu manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libboost-doc:s390x libboost1.74-doc:s390x libboost-atomic1.74-dev:s390x libboost-chrono1.74-dev:s390x libboost-container1.74-dev:s390x libboost-context1.74-dev:s390x libboost-contract1.74-dev:s390x libboost-coroutine1.74-dev:s390x libboost-date-time1.74-dev:s390x libboost-exception1.74-dev:s390x libboost-fiber1.74-dev:s390x libboost-filesystem1.74-dev:s390x libboost-graph1.74-dev:s390x libboost-graph-parallel1.74-dev:s390x libboost-iostreams1.74-dev:s390x libboost-locale1.74-dev:s390x libboost-log1.74-dev:s390x libboost-math1.74-dev:s390x libboost-mpi1.74-dev:s390x libboost-mpi-python1.74-dev:s390x libboost-numpy1.74-dev:s390x libboost-program-options1.74-dev:s390x libboost-python1.74-dev:s390x libboost-random1.74-dev:s390x libboost-regex1.74-dev:s390x libboost-serialization1.74-dev:s390x libboost-stacktrace1.74-dev:s390x libboost-system1.74-dev:s390x libboost-test1.74-dev:s390x libboost-thread1.74-dev:s390x libboost-timer1.74-dev:s390x libboost-type-erasure1.74-dev:s390x libboost-wave1.74-dev:s390x libboost1.74-tools-dev:s390x libmpfrc++-dev:s390x libntl-dev:s390x libboost-nowide1.74-dev:s390x glibc-doc:s390x libc-l10n:s390x locales:s390x glibc-doc manpages-dev:s390x libcurl4-doc:s390x libgnutls28-dev:s390x libidn11-dev:s390x libkrb5-dev:s390x libldap2-dev:s390x librtmp-dev:s390x libssh2-1-dev:s390x pkg-config:s390x gnupg git bzr gnutls-bin:s390x krb5-doc:s390x krb5-user:s390x liblzma-doc:s390x libstdc++-10-doc libstdc++-10-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx libnss-nis:s390x libnss-nisplus:s390x ca-certificates:s390x ca-certificates libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:s390x libldap-common libldap-common:s390x libgpm2 publicsuffix publicsuffix:s390x libsasl2-modules libsasl2-modules:s390x libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils build-essential cmake cmake-data cpp-10-s390x-linux-gnu cpp-s390x-linux-gnu cross-config crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-10 g++-10-s390x-linux-gnu g++-s390x-linux-gnu gcc-10-base:s390x gcc-10-cross-base gcc-10-s390x-linux-gnu gcc-10-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libarchive13 libasan6:s390x libasan6-s390x-cross libatomic1:s390x libatomic1-s390x-cross libboost-dev:s390x libboost1.74-dev:s390x libbrotli1 libbrotli1:s390x libbz2-1.0:s390x libc6:s390x libc6-dev libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcom-err2:s390x libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:s390x libcrypt1:s390x libcurl3-gnutls:s390x libcurl4 libcurl4-gnutls-dev:s390x libdb5.3:s390x libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:s390x libdeflate0:s390x libdivsufsort-dev:s390x libdivsufsort3:s390x libdpkg-perl libelf1 libexpat1 libffi7:s390x libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:s390x libgcc-10-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgmp10:s390x libgnutls30:s390x libgomp1:s390x libgomp1-s390x-cross libgssapi-krb5-2:s390x libhogweed6:s390x libhts-dev:s390x libhts3:s390x libicu67 libidn2-0:s390x libio-string-perl libitm1:s390x libitm1-s390x-cross libjsoncpp24 libk5crypto3:s390x libkeyutils1:s390x libkrb5-3:s390x libkrb5support0:s390x libldap-2.4-2 libldap-2.4-2:s390x liblocale-gettext-perl liblzma-dev:s390x liblzma5:s390x libmagic-mgc libmagic1 libncurses6 libnettle8:s390x libnghttp2-14 libnghttp2-14:s390x libnsl-dev libnsl-dev:s390x libnsl2:s390x libp11-kit0:s390x libperl5.32 libpipeline1 libprocps8 libpsl5 libpsl5:s390x librhash0 librtmp1 librtmp1:s390x libsasl2-2 libsasl2-2:s390x libsasl2-modules-db libsasl2-modules-db:s390x libseqan2-dev libsigsegv2 libssh2-1 libssh2-1:s390x libssl1.1:s390x libstdc++-10-dev libstdc++-10-dev:s390x libstdc++-10-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libsub-override-perl libtasn1-6:s390x libtclap-dev:s390x libtirpc-dev libtirpc-dev:s390x libtirpc3:s390x libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libunistring2:s390x libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:s390x linux-libc-dev-s390x-cross m4 man-db perl perl-modules-5.32 po-debconf procps sbuild-build-depends-main-dummy:s390x sensible-utils ucf zlib1g:s390x zlib1g-dev:s390x 0 upgraded, 163 newly installed, 0 to remove and 0 not upgraded. Need to get 242 MB of archives. After this operation, 1104 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-4 [2823 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-4 [4117 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-4 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main s390x gcc-10-base s390x 10.2.1-6 [201 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.2+20201114-2 [102 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.17-5 [63.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.17-5 [502 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.39-3 [69.1 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-14 [313 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.3-2 [814 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.35.2-2 [1984 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.18-5 [104 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.1-1 [190 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.31-13 [2344 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev amd64 10.2.1-6 [1741 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10 amd64 10.2.1-6 [9380 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:10.2.1-1 [1644 B] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.18.4-2 [1725 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.3-2+b1 [343 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1 [69.1 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1 [106 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3 [232 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.9.0-3 [169 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.74.0-1.3+b1 [341 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.2.10-2 [96.9 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp24 amd64 1.9.4-4 [78.9 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.1-2 [129 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.40.0-2 [132 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.18.4-2 [5593 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-s390x-linux-gnu-base amd64 10.2.1-6cross1 [202 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-10-s390x-linux-gnu amd64 10.2.1-6cross1 [41.1 MB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:10.2.1-1 [16.8 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu1 [31.5 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10.2.1-6cross1 [197 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-s390x-cross all 2.31-9cross4 [1231 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-s390x-cross all 10.2.1-6cross1 [24.6 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-s390x-cross all 10.2.1-6cross1 [90.5 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-s390x-cross all 10.2.1-6cross1 [24.9 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-s390x-cross all 10.2.1-6cross1 [7944 B] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-s390x-cross all 10.2.1-6cross1 [1863 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-s390x-cross all 10.2.1-6cross1 [442 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-s390x-cross all 10.2.1-6cross1 [747 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-10-dev-s390x-cross all 10.2.1-6cross1 [663 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-s390x-linux-gnu amd64 10.2.1-6cross1 [46.3 MB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:10.2.1-1 [1456 B] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-s390x-cross all 5.10.13-1cross4 [1395 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-s390x-cross all 2.31-9cross4 [1943 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-10-dev-s390x-cross all 10.2.1-6cross1 [1684 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 g++-10-s390x-linux-gnu amd64 10.2.1-6cross1 [44.2 MB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:10.2.1-1 [1176 B] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu1 [30.5 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu1 [41.6 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-s390x all 12.9 [6704 B] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.183-3 [165 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.3.4 [1049 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-s1 s390x 10.2.1-6 [24.6 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt1 s390x 1:4.4.18-5 [88.0 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main s390x libc6 s390x 2.31-13 [2445 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main s390x libasan6 s390x 10.2.1-6 [1869 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main s390x libatomic1 s390x 10.2.1-6 [8124 B] Get:109 http://debian.oregonstate.edu/debian unstable/main s390x libgomp1 s390x 10.2.1-6 [92.4 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main s390x libitm1 s390x 10.2.1-6 [25.3 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++6 s390x 10.2.1-6 [484 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main s390x libubsan1 s390x 10.2.1-6 [748 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main s390x libgcc-10-dev s390x 10.2.1-6 [660 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main s390x linux-libc-dev s390x 5.10.46-4 [1361 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main s390x libcrypt-dev s390x 1:4.4.18-5 [105 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main s390x libcom-err2 s390x 1.46.2-2 [74.1 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5support0 s390x 1.18.3-6 [64.3 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main s390x libk5crypto3 s390x 1.18.3-6 [112 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main s390x libkeyutils1 s390x 1.6.1-2 [15.2 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main s390x libssl1.1 s390x 1.1.1k-1 [1213 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main s390x libkrb5-3 s390x 1.18.3-6 [341 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main s390x libgssapi-krb5-2 s390x 1.18.3-6 [153 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main s390x libtirpc3 s390x 1.3.1-1 [77.8 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main s390x libnsl2 s390x 1.3.0-2 [37.3 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main s390x libtirpc-dev s390x 1.3.1-1 [185 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main s390x libnsl-dev s390x 1.3.0-2 [64.6 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main s390x libc6-dev s390x 2.31-13 [1971 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main s390x libstdc++-10-dev s390x 10.2.1-6 [1698 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main s390x libboost1.74-dev s390x 1.74.0-9 [9534 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main s390x libboost-dev s390x 1.74.0.3 [4548 B] Get:131 http://debian.oregonstate.edu/debian unstable/main s390x libbrotli1 s390x 1.0.9-2+b2 [275 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main s390x libbz2-1.0 s390x 1.0.8-4 [45.9 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main s390x libgmp10 s390x 2:6.2.1+dfsg-1 [552 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main s390x libnettle8 s390x 3.7.3-1 [277 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main s390x libhogweed6 s390x 3.7.3-1 [318 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main s390x libunistring2 s390x 0.9.10-4 [366 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main s390x libidn2-0 s390x 2.3.0-5 [85.0 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main s390x libffi7 s390x 3.3-6 [20.1 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main s390x libp11-kit0 s390x 0.23.22-1 [333 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main s390x libtasn1-6 s390x 4.16.0-2 [52.5 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main s390x libgnutls30 s390x 3.7.1-5 [1228 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main s390x libdb5.3 s390x 5.3.28+dfsg1-0.8 [618 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main s390x libsasl2-modules-db s390x 2.1.27+dfsg-2.1 [68.2 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main s390x libsasl2-2 s390x 2.1.27+dfsg-2.1 [103 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main s390x libldap-2.4-2 s390x 2.4.57+dfsg-3 [221 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main s390x libnghttp2-14 s390x 1.43.0-1 [72.4 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main s390x libpsl5 s390x 0.21.0-1.2 [57.1 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g s390x 1:1.2.11.dfsg-2 [88.9 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d.1-2+b2 [56.5 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main s390x libssh2-1 s390x 1.9.0-3 [159 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main s390x libcurl3-gnutls s390x 7.74.0-1.3+b1 [315 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main s390x libcurl4-gnutls-dev s390x 7.74.0-1.3+b1 [412 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main s390x libdeflate0 s390x 1.7-1 [46.1 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main s390x libdeflate-dev s390x 1.7-1 [42.0 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main s390x libdivsufsort3 s390x 2.0.1-5 [43.6 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main s390x libdivsufsort-dev s390x 2.0.1-5 [19.1 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main s390x liblzma5 s390x 5.2.5-2 [167 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main s390x libhts3 s390x 1.11-4 [347 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main s390x liblzma-dev s390x 5.2.5-2 [228 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-2 [189 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main s390x libhts-dev s390x 1.11-4 [3872 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main amd64 libseqan2-dev all 2.4.0+dfsg-14 [1220 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main s390x libtclap-dev s390x 1.2.4-1 [7899 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 242 MB in 2s (119 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10488 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-8_amd64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.1-4_all.deb ... Unpacking perl-modules-5.32 (5.32.1-4) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../006-libperl5.32_5.32.1-4_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-4) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.32.1-4_amd64.deb ... Unpacking perl (5.32.1-4) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package gcc-10-base:s390x. Preparing to unpack .../009-gcc-10-base_10.2.1-6_s390x.deb ... Unpacking gcc-10-base:s390x (10.2.1-6) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../010-libncurses6_6.2+20201114-2_amd64.deb ... Unpacking libncurses6:amd64 (6.2+20201114-2) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../011-libprocps8_2%3a3.3.17-5_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../012-procps_2%3a3.3.17-5_amd64.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../013-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../014-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../015-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../016-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../017-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../018-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../019-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../020-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../021-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../022-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../023-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../024-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package binutils-s390x-linux-gnu. Preparing to unpack .../025-binutils-s390x-linux-gnu_2.35.2-2_amd64.deb ... Unpacking binutils-s390x-linux-gnu (2.35.2-2) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../026-libcrypt-dev_1%3a4.4.18-5_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.18-5) ... Selecting previously unselected package libtirpc-dev:amd64. Preparing to unpack .../027-libtirpc-dev_1.3.1-1_amd64.deb ... Unpacking libtirpc-dev:amd64 (1.3.1-1) ... Selecting previously unselected package libnsl-dev:amd64. Preparing to unpack .../028-libnsl-dev_1.3.0-2_amd64.deb ... Unpacking libnsl-dev:amd64 (1.3.0-2) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../029-libc6-dev_2.31-13_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-13) ... Selecting previously unselected package libstdc++-10-dev:amd64. Preparing to unpack .../030-libstdc++-10-dev_10.2.1-6_amd64.deb ... Unpacking libstdc++-10-dev:amd64 (10.2.1-6) ... Selecting previously unselected package g++-10. Preparing to unpack .../031-g++-10_10.2.1-6_amd64.deb ... Unpacking g++-10 (10.2.1-6) ... Selecting previously unselected package g++. Preparing to unpack .../032-g++_4%3a10.2.1-1_amd64.deb ... Unpacking g++ (4:10.2.1-1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../033-libdpkg-perl_1.20.9_all.deb ... Unpacking libdpkg-perl (1.20.9) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../034-dpkg-dev_1.20.9_all.deb ... Unpacking dpkg-dev (1.20.9) ... Selecting previously unselected package build-essential. Preparing to unpack .../035-build-essential_12.9_amd64.deb ... Unpacking build-essential (12.9) ... Selecting previously unselected package cmake-data. Preparing to unpack .../036-cmake-data_3.18.4-2_all.deb ... Unpacking cmake-data (3.18.4-2) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../037-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../038-libxml2_2.9.10+dfsg-6.7_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package libarchive13:amd64. Preparing to unpack .../039-libarchive13_3.4.3-2+b1_amd64.deb ... Unpacking libarchive13:amd64 (3.4.3-2+b1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../040-libbrotli1_1.0.9-2+b2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b2) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../041-libsasl2-modules-db_2.1.27+dfsg-2.1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../042-libsasl2-2_2.1.27+dfsg-2.1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libldap-2.4-2:amd64. Preparing to unpack .../043-libldap-2.4-2_2.4.57+dfsg-3_amd64.deb ... Unpacking libldap-2.4-2:amd64 (2.4.57+dfsg-3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../044-libnghttp2-14_1.43.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.43.0-1) ... Selecting previously unselected package libpsl5:amd64. Preparing to unpack .../045-libpsl5_0.21.0-1.2_amd64.deb ... Unpacking libpsl5:amd64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../046-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:amd64. Preparing to unpack .../047-libssh2-1_1.9.0-3_amd64.deb ... Unpacking libssh2-1:amd64 (1.9.0-3) ... Selecting previously unselected package libcurl4:amd64. Preparing to unpack .../048-libcurl4_7.74.0-1.3+b1_amd64.deb ... Unpacking libcurl4:amd64 (7.74.0-1.3+b1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../049-libexpat1_2.2.10-2_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2) ... Selecting previously unselected package libjsoncpp24:amd64. Preparing to unpack .../050-libjsoncpp24_1.9.4-4_amd64.deb ... Unpacking libjsoncpp24:amd64 (1.9.4-4) ... Selecting previously unselected package librhash0:amd64. Preparing to unpack .../051-librhash0_1.4.1-2_amd64.deb ... Unpacking librhash0:amd64 (1.4.1-2) ... Selecting previously unselected package libuv1:amd64. Preparing to unpack .../052-libuv1_1.40.0-2_amd64.deb ... Unpacking libuv1:amd64 (1.40.0-2) ... Selecting previously unselected package cmake. Preparing to unpack .../053-cmake_3.18.4-2_amd64.deb ... Unpacking cmake (3.18.4-2) ... Selecting previously unselected package gcc-10-s390x-linux-gnu-base:amd64. Preparing to unpack .../054-gcc-10-s390x-linux-gnu-base_10.2.1-6cross1_amd64.deb ... Unpacking gcc-10-s390x-linux-gnu-base:amd64 (10.2.1-6cross1) ... Selecting previously unselected package cpp-10-s390x-linux-gnu. Preparing to unpack .../055-cpp-10-s390x-linux-gnu_10.2.1-6cross1_amd64.deb ... Unpacking cpp-10-s390x-linux-gnu (10.2.1-6cross1) ... Selecting previously unselected package cpp-s390x-linux-gnu. Preparing to unpack .../056-cpp-s390x-linux-gnu_4%3a10.2.1-1_amd64.deb ... Unpacking cpp-s390x-linux-gnu (4:10.2.1-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../057-cross-config_2.6.18+nmu1_all.deb ... Unpacking cross-config (2.6.18+nmu1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../058-gcc-10-cross-base_10.2.1-6cross1_all.deb ... Unpacking gcc-10-cross-base (10.2.1-6cross1) ... Selecting previously unselected package libc6-s390x-cross. Preparing to unpack .../059-libc6-s390x-cross_2.31-9cross4_all.deb ... Unpacking libc6-s390x-cross (2.31-9cross4) ... Selecting previously unselected package libgcc-s1-s390x-cross. Preparing to unpack .../060-libgcc-s1-s390x-cross_10.2.1-6cross1_all.deb ... Unpacking libgcc-s1-s390x-cross (10.2.1-6cross1) ... Selecting previously unselected package libgomp1-s390x-cross. Preparing to unpack .../061-libgomp1-s390x-cross_10.2.1-6cross1_all.deb ... Unpacking libgomp1-s390x-cross (10.2.1-6cross1) ... Selecting previously unselected package libitm1-s390x-cross. Preparing to unpack .../062-libitm1-s390x-cross_10.2.1-6cross1_all.deb ... Unpacking libitm1-s390x-cross (10.2.1-6cross1) ... Selecting previously unselected package libatomic1-s390x-cross. Preparing to unpack .../063-libatomic1-s390x-cross_10.2.1-6cross1_all.deb ... Unpacking libatomic1-s390x-cross (10.2.1-6cross1) ... Selecting previously unselected package libasan6-s390x-cross. Preparing to unpack .../064-libasan6-s390x-cross_10.2.1-6cross1_all.deb ... Unpacking libasan6-s390x-cross (10.2.1-6cross1) ... 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Selecting previously unselected package sbuild-build-depends-main-dummy:s390x. Preparing to unpack .../162-sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libexpat1:amd64 (2.2.10-2) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up libpsl5:amd64 (0.21.0-1.2) ... Setting up binutils-s390x-linux-gnu (2.35.2-2) ... Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up perl-modules-5.32 (5.32.1-4) ... Setting up libbrotli1:amd64 (1.0.9-2+b2) ... Setting up libc6-s390x-cross (2.31-9cross4) ... Setting up libnghttp2-14:amd64 (1.43.0-1) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up linux-libc-dev:s390x (5.10.46-4) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libseqan2-dev (2.4.0+dfsg-14) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2.1) ... Setting up gcc-10-base:s390x (10.2.1-6) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up linux-libc-dev-s390x-cross (5.10.13-1cross4) ... Setting up cross-config (2.6.18+nmu1) ... Setting up libtirpc-dev:amd64 (1.3.1-1) ... Setting up libuv1:amd64 (1.40.0-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:amd64 (6.2+20201114-2) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up libperl5.32:amd64 (5.32.1-4) ... Setting up gcc-10-cross-base (10.2.1-6cross1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2.1) ... Setting up libtclap-dev:s390x (1.2.4-1) ... Setting up libjsoncpp24:amd64 (1.9.4-4) ... Setting up libitm1-s390x-cross (10.2.1-6cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.14) ... Setting up libc6-dev-s390x-cross (2.31-9cross4) ... Setting up librhash0:amd64 (1.4.1-2) ... Setting up libcrypt-dev:amd64 (1:4.4.18-5) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libc6-dev:amd64 (2.31-13) ... Setting up libssh2-1:amd64 (1.9.0-3) ... Setting up cmake-data (3.18.4-2) ... Setting up libelf1:amd64 (0.183-3) ... Setting up libgomp1-s390x-cross (10.2.1-6cross1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up gcc-10-s390x-linux-gnu-base:amd64 (10.2.1-6cross1) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libprocps8:amd64 (2:3.3.17-5) ... Setting up gettext (0.21-4) ... Setting up libstdc++-10-dev:amd64 (10.2.1-6) ... Setting up g++-10 (10.2.1-6) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:amd64 (3.4.3-2+b1) ... Setting up libatomic1-s390x-cross (10.2.1-6cross1) ... Setting up libldap-2.4-2:amd64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up perl (5.32.1-4) ... Setting up libgcc-s1-s390x-cross (10.2.1-6cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up autoconf (2.69-14) ... Setting up g++ (4:10.2.1-1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up cpp-10-s390x-linux-gnu (10.2.1-6cross1) ... Setting up libcurl4:amd64 (7.74.0-1.3+b1) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up cpp-s390x-linux-gnu (4:10.2.1-1) ... Setting up libstdc++6-s390x-cross (10.2.1-6cross1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up libasan6-s390x-cross (10.2.1-6cross1) ... Setting up dpkg-dev (1.20.9) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up cmake (3.18.4-2) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libubsan1-s390x-cross (10.2.1-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-10-dev-s390x-cross (10.2.1-6cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libstdc++-10-dev-s390x-cross (10.2.1-6cross1) ... Setting up debhelper (13.3.4) ... Setting up gcc-10-s390x-linux-gnu (10.2.1-6cross1) ... Setting up gcc-s390x-linux-gnu (4:10.2.1-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-10-s390x-linux-gnu (10.2.1-6cross1) ... Setting up g++-s390x-linux-gnu (4:10.2.1-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu1) ... Setting up dpkg-cross (2.6.18+nmu1) ... Setting up crossbuild-essential-s390x (12.9) ... Setting up libcrypt1:s390x (1:4.4.18-5) ... Setting up libgcc-s1:s390x (10.2.1-6) ... Setting up libc6:s390x (2.31-13) ... Setting up libcrypt-dev:s390x (1:4.4.18-5) ... Setting up libtasn1-6:s390x (4.16.0-2) ... Setting up libbz2-1.0:s390x (1.0.8-4) ... Setting up libdivsufsort3:s390x (2.0.1-5) ... Setting up libdb5.3:s390x (5.3.28+dfsg1-0.8) ... Setting up libstdc++6:s390x (10.2.1-6) ... Setting up libitm1:s390x (10.2.1-6) ... Setting up libdivsufsort-dev:s390x (2.0.1-5) ... Setting up libkeyutils1:s390x (1.6.1-2) ... Setting up liblzma5:s390x (5.2.5-2) ... Setting up libssl1.1:s390x (1.1.1k-1) ... Setting up libbrotli1:s390x (1.0.9-2+b2) ... Setting up libffi7:s390x (3.3-6) ... Setting up libnghttp2-14:s390x (1.43.0-1) ... Setting up libunistring2:s390x (0.9.10-4) ... Setting up libdeflate0:s390x (1.7-1) ... Setting up zlib1g:s390x (1:1.2.11.dfsg-2) ... Setting up libidn2-0:s390x (2.3.0-5) ... Setting up libcom-err2:s390x (1.46.2-2) ... Setting up libgomp1:s390x (10.2.1-6) ... Setting up libasan6:s390x (10.2.1-6) ... Setting up libkrb5support0:s390x (1.18.3-6) ... Setting up libsasl2-modules-db:s390x (2.1.27+dfsg-2.1) ... Setting up libnettle8:s390x (3.7.3-1) ... Setting up libgmp10:s390x (2:6.2.1+dfsg-1) ... Setting up libp11-kit0:s390x (0.23.22-1) ... Setting up libatomic1:s390x (10.2.1-6) ... Setting up libk5crypto3:s390x (1.18.3-6) ... Setting up libsasl2-2:s390x (2.1.27+dfsg-2.1) ... Setting up liblzma-dev:s390x (5.2.5-2) ... Setting up libubsan1:s390x (10.2.1-6) ... Setting up libssh2-1:s390x (1.9.0-3) ... Setting up libkrb5-3:s390x (1.18.3-6) ... Setting up libdeflate-dev:s390x (1.7-1) ... Setting up libpsl5:s390x (0.21.0-1.2) ... Setting up libhogweed6:s390x (3.7.3-1) ... Setting up libgcc-10-dev:s390x (10.2.1-6) ... Setting up libgnutls30:s390x (3.7.1-5) ... Setting up librtmp1:s390x (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:s390x (1.18.3-6) ... Setting up libtirpc3:s390x (1.3.1-1) ... Setting up libldap-2.4-2:s390x (2.4.57+dfsg-3) ... Setting up libcurl3-gnutls:s390x (7.74.0-1.3+b1) ... Setting up libcurl4-gnutls-dev:s390x (7.74.0-1.3+b1) ... Setting up libtirpc-dev:s390x (1.3.1-1) ... Setting up libnsl2:s390x (1.3.0-2) ... Setting up libhts3:s390x (1.11-4) ... Setting up libnsl-dev:s390x (1.3.0-2) ... Setting up libc6-dev:s390x (2.31-13) ... Setting up libstdc++-10-dev:s390x (10.2.1-6) ... Setting up libboost1.74-dev:s390x (1.74.0-9) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-2) ... Setting up libboost-dev:s390x (1.74.0.3) ... Setting up libhts-dev:s390x (1.11-4) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.31-13) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.35.2-2 dpkg-dev_1.20.9 g++-10_10.2.1-6 gcc-10_10.2.1-6 libc6-dev_2.31-13 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-s390x-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-s390x-cross_10.2.1-6cross1 linux-libc-dev_5.10.46-4 Package versions: adduser_3.118 apt_2.2.4 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1 base-passwd_3.5.51 bash_5.1-3+b1 binutils_2.35.2-2 binutils-common_2.35.2-2 binutils-s390x-linux-gnu_2.35.2-2 binutils-x86-64-linux-gnu_2.35.2-2 bsdextrautils_2.36.1-8 bsdutils_1:2.36.1-8 build-essential_12.9 bzip2_1.0.8-4 cmake_3.18.4-2 cmake-data_3.18.4-2 coreutils_8.32-4+b1 cpp_4:10.2.1-1 cpp-10_10.2.1-6 cpp-10-s390x-linux-gnu_10.2.1-6cross1 cpp-8_8.4.0-7 cpp-s390x-linux-gnu_4:10.2.1-1 cross-config_2.6.18+nmu1 crossbuild-essential-s390x_12.9 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.3.4 debian-archive-keyring_2021.1.1 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu1 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.2-2 fakeroot_1.25.3-1.1 fdisk_2.36.1-8 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1 g++-10_10.2.1-6 g++-10-s390x-linux-gnu_10.2.1-6cross1 g++-s390x-linux-gnu_4:10.2.1-1 gcc_4:10.2.1-1 gcc-10_10.2.1-6 gcc-10-base_10.2.1-6 gcc-10-cross-base_10.2.1-6cross1 gcc-10-s390x-linux-gnu_10.2.1-6cross1 gcc-10-s390x-linux-gnu-base_10.2.1-6cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-1 gcc-s390x-linux-gnu_4:10.2.1-1 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.6-1 groff-base_1.22.4-6 gzip_1.10-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-10 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.2.4 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2+b1 libasan5_9.4.0-1 libasan6_10.2.1-6 libasan6-s390x-cross_10.2.1-6cross1 libatomic1_10.2.1-6 libatomic1-s390x-cross_10.2.1-6cross1 libattr1_1:2.4.48-6 libaudit-common_1:3.0-2 libaudit1_1:3.0-2 libbinutils_2.35.2-2 libblkid1_2.36.1-8 libboost-dev_1.74.0.3 libboost1.74-dev_1.74.0-9 libbrotli1_1.0.9-2+b2 libbz2-1.0_1.0.8-4 libc-bin_2.31-13 libc-dev-bin_2.31-13 libc6_2.31-13 libc6-dev_2.31-13 libc6-dev-s390x-cross_2.31-9cross4 libc6-s390x-cross_2.31-9cross4 libcap-ng0_0.7.9-2.2+b1 libcc1-0_10.2.1-6 libcom-err2_1.46.2-2 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.18-5 libcrypt1_1:4.4.18-5 libctf-nobfd0_2.35.2-2 libctf0_2.35.2-2 libcurl3-gnutls_7.74.0-1.3+b1 libcurl4_7.74.0-1.3+b1 libcurl4-gnutls-dev_7.74.0-1.3+b1 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.260 libdebhelper-perl_13.3.4 libdebian-dpkgcross-perl_2.6.18+nmu1 libdeflate-dev_1.7-1 libdeflate0_1.7-1 libdivsufsort-dev_2.0.1-5 libdivsufsort3_2.0.1-5 libdpkg-perl_1.20.9 libelf1_0.183-3 libexpat1_2.2.10-2 libext2fs2_1.46.2-2 libfakeroot_1.25.3-1.1 libfdisk1_2.36.1-8 libffi6_3.2.1-9 libffi7_3.3-6 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.0-1 libfile-which-perl_1.23-1 libgcc-10-dev_10.2.1-6 libgcc-10-dev-s390x-cross_10.2.1-6cross1 libgcc-s1_10.2.1-6 libgcc-s1-s390x-cross_10.2.1-6cross1 libgcrypt20_1.8.7-6 libgdbm-compat4_1.19-2 libgdbm6_1.19-2 libgmp10_2:6.2.1+dfsg-1 libgnutls30_3.7.1-5 libgomp1_10.2.1-6 libgomp1-s390x-cross_10.2.1-6cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.18.3-6 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libhts-dev_1.11-4 libhts3_1.11-4 libicu67_67.1-7 libidn2-0_2.3.0-5 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.23-1 libitm1_10.2.1-6 libitm1-s390x-cross_10.2.1-6cross1 libjsoncpp24_1.9.4-4 libk5crypto3_1.18.3-6 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-6 libkrb5support0_1.18.3-6 libldap-2.4-2_2.4.57+dfsg-3 liblocale-gettext-perl_1.07-4+b1 liblsan0_10.2.1-6 liblz4-1_1.9.3-2 liblzma-dev_5.2.5-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.39-3 libmagic1_1:5.39-3 libmount1_2.36.1-8 libmpc3_1.2.0-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libncurses6_6.2+20201114-2 libncursesw6_6.2+20201114-2 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.23.22-1 libpam-modules_1.4.0-9 libpam-modules-bin_1.4.0-9 libpam-runtime_1.4.0-9 libpam0g_1.4.0-9 libpcre2-8-0_10.36-2 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.1-4 libpipeline1_1.5.3-1 libprocps8_2:3.3.17-5 libpsl5_0.21.0-1.2 libquadmath0_10.2.1-6 librhash0_1.4.1-2 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg-2.1 libsasl2-modules-db_2.1.27+dfsg-2.1 libseccomp2_2.5.1-1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libseqan2-dev_2.4.0+dfsg-14 libsigsegv2_2.13-1 libsmartcols1_2.36.1-8 libss2_1.46.2-2 libssh2-1_1.9.0-3 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-s390x-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-s390x-cross_10.2.1-6cross1 libsub-override-perl_0.09-2 libsystemd0_247.3-6 libtasn1-6_4.16.0-2 libtclap-dev_1.2.4-1 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libtsan0_10.2.1-6 libubsan1_10.2.1-6 libubsan1-s390x-cross_10.2.1-6cross1 libuchardet0_0.0.7-1 libudev1_247.3-6 libunistring2_0.9.10-4 libuuid1_2.36.1-8 libuv1_1.40.0-2 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.7 libxxhash0_0.8.0-2 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-2.1 linux-libc-dev_5.10.46-4 linux-libc-dev-s390x-cross_5.10.13-1cross4 login_1:4.8.1-1 logsave_1.46.2-2 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.36.1-8 ncurses-base_6.2+20201114-2 ncurses-bin_6.2+20201114-2 passwd_1:4.8.1-1 patch_2.7.6-7 perl_5.32.1-4 perl-base_5.32.1-4 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-4 po-debconf_1.0.21+nmu1 procps_2:3.3.17-5 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.14 sysvinit-utils_2.96-7 tar_1.34+dfsg-1 tzdata_2021a-1 ucf_3.0043 util-linux_2.36.1-8 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: sibelia Binary: sibelia, sibelia-examples Architecture: any all Version: 3.0.7+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://bioinf.spbau.ru/sibelia Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/sibelia Vcs-Git: https://salsa.debian.org/med-team/sibelia.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), cmake, libdivsufsort-dev, libboost-dev, libseqan2-dev, libtclap-dev, libhts-dev Package-List: sibelia deb science optional arch=any sibelia-examples deb science optional arch=all Checksums-Sha1: fab5441d7decc4e9dedbf1169549d85241c132cc 4833128 sibelia_3.0.7+dfsg.orig.tar.xz 88412f8aeaccc9d9f011c5da4db3637f95d49922 10240 sibelia_3.0.7+dfsg-3.debian.tar.xz Checksums-Sha256: d4dd618fe9f373be8ad90f9b1d670ac8e45a7386d67e28b0d055e1d77f9d7caa 4833128 sibelia_3.0.7+dfsg.orig.tar.xz bb7d1255911a04c84c953ff5d55c861386d3473069fbcc6bed9aaf29a06bccd5 10240 sibelia_3.0.7+dfsg-3.debian.tar.xz Files: 38311be6d2eee4d5e4d4a8ccf2d9c85e 4833128 sibelia_3.0.7+dfsg.orig.tar.xz 388e525dada128486669834bc22336ff 10240 sibelia_3.0.7+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCAAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6VdkkOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtHGiBAAm6u4tj9UWS8HgpXWxznQI9vGg9FrdDSxTzEB qPJmfeqdtIMCpZ0GjeHH8PruiVjptMup0Z/q9IwR8DBhsjWpMqmo6bZlDMp7uycU vGjCLNO9qA/NOFofCqFmPzAZw7IRSr7iORHeCfvM7+CCs0cHCSYjWZdAgJcNwnTv d8aBV1CrzsRBoaaNs0ptDSf1TW/h7lFWtgO4KDrznq+DYLzVSQtW/krvvSa8DLps x8YB0ycVZX5604gVOn9MaYmnk8qhEcp3D0Tvtxv1vYBS/Rq3IGkQL3E1OMAKTdas 2YMQ5La2oynGPTtWAR3Lm4txmRwi7/w1ezNlq7KL5rSN/0PfmKVOyPxWxcleDR5Z ZIDbBAtj0/4fkdjfy/QM0dAREnHsnn0io27p75XqZlYChNB7VTiAs+MNBFud3GNW SMLkjRPxgZrncXzN0eSPnVQG4qh8ug95eZqcxUlhRKln0C3Mi1W00/wsl/AdJq0Q joziW7xlWKGL5ZPcYhwItWj7Ez6dBzOVCXzXeawO/vk5WfE6pcLnoKjf7n9NiDgu FFSAR8uuYkr0hkb6gDtOLbSIYcONcq7v4bglP1j1FR8oknEuw1h39mj/uHnVs2dN nLJdK7BfhdDOVqO76CSOqcXMGof8qaSVCGyKnnWK0C7n47cazszkrRTfZoXNSIyq 3NAyp/E= =uCA9 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.UM9WX2ty/trustedkeys.kbx': General error gpgv: Signature made Tue Apr 14 08:37:29 2020 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./sibelia_3.0.7+dfsg-3.dsc dpkg-source: info: extracting sibelia in /<> dpkg-source: info: unpacking sibelia_3.0.7+dfsg.orig.tar.xz dpkg-source: info: unpacking sibelia_3.0.7+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libdivsufsort.patch dpkg-source: info: applying use_debian_packaged_lagan.patch dpkg-source: info: applying snpeff_is_removed.patch dpkg-source: info: applying 2to3.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-077dbf80-29f5-499f-ba6c-06ebc57dbbc2 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package sibelia dpkg-buildpackage: info: source version 3.0.7+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean --sourcedirectory=src dh_auto_clean -O--sourcedirectory=src dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src cd obj-s390x-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=s390x -DCMAKE_C_COMPILER=s390x-linux-gnu-gcc -DCMAKE_CXX_COMPILER=s390x-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/s390x-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/s390x-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/s390x-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/s390x-linux-gnu ../src -- The CXX compiler identification is GNU 10.2.1 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/s390x-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_C_COMPILER CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-s390x-linux-gnu dh_auto_build -a -O--sourcedirectory=src cd obj-s390x-linux-gnu && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -S/<>/src -B/<>/obj-s390x-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-s390x-linux-gnu/CMakeFiles /<>/obj-s390x-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-s390x-linux-gnu' make -f CMakeFiles/Sibelia.dir/build.make CMakeFiles/Sibelia.dir/depend make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/src /<>/src /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/CMakeFiles/Sibelia.dir/DependInfo.cmake --color= Dependee "/<>/obj-s390x-linux-gnu/CMakeFiles/Sibelia.dir/DependInfo.cmake" is newer than depender "/<>/obj-s390x-linux-gnu/CMakeFiles/Sibelia.dir/depend.internal". Dependee "/<>/obj-s390x-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/<>/obj-s390x-linux-gnu/CMakeFiles/Sibelia.dir/depend.internal". Scanning dependencies of target Sibelia make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f CMakeFiles/Sibelia.dir/build.make CMakeFiles/Sibelia.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' [ 5%] Building CXX object CMakeFiles/Sibelia.dir/sibelia.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/sibelia.cpp.o -c /<>/src/sibelia.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/postprocessor.h:13, from /<>/src/sibelia.cpp:8: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/util.h:10, from /<>/src/sibelia.cpp:9: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/bits/locale_conv.h:41, from /usr/s390x-linux-gnu/include/c++/10/locale:43, from /usr/s390x-linux-gnu/include/c++/10/iomanip:43, from /usr/include/tclap/Arg.h:37, from /usr/include/tclap/SwitchArg.h:32, from /usr/include/tclap/CmdLine.h:27, from /<>/src/sibelia.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/util.h:10, from /<>/src/sibelia.cpp:9: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/bits/locale_conv.h:41, from /usr/s390x-linux-gnu/include/c++/10/locale:43, from /usr/s390x-linux-gnu/include/c++/10/iomanip:43, from /usr/include/tclap/Arg.h:37, from /usr/include/tclap/SwitchArg.h:32, from /usr/include/tclap/CmdLine.h:27, from /<>/src/sibelia.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /<>/src/sibelia.cpp: In function ‘int main(int, char**)’: /<>/src/sibelia.cpp:239:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 239 | std::auto_ptr finder(inRAM.isSet() ? new SyntenyFinder::BlockFinder(chrList) : new SyntenyFinder::BlockFinder(chrList, tempDir)); | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/bits/locale_conv.h:41, from /usr/s390x-linux-gnu/include/c++/10/locale:43, from /usr/s390x-linux-gnu/include/c++/10/iomanip:43, from /usr/include/tclap/Arg.h:37, from /usr/include/tclap/SwitchArg.h:32, from /usr/include/tclap/CmdLine.h:27, from /<>/src/sibelia.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 10%] Building CXX object CMakeFiles/Sibelia.dir/postprocessor.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/postprocessor.cpp.o -c /<>/src/postprocessor.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/postprocessor.h:13, from /<>/src/postprocessor.cpp:9: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 15%] Building CXX object CMakeFiles/Sibelia.dir/indexedsequence.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/indexedsequence.cpp.o -c /<>/src/indexedsequence.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/hashing.h:10, from /<>/src/indexedsequence.h:10, from /<>/src/indexedsequence.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/indexedsequence.cpp:7: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/hashing.h:10, from /<>/src/indexedsequence.h:10, from /<>/src/indexedsequence.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/indexedsequence.cpp:7: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/hashing.h:10, from /<>/src/indexedsequence.h:10, from /<>/src/indexedsequence.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 20%] Building CXX object CMakeFiles/Sibelia.dir/util.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/util.cpp.o -c /<>/src/util.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/util.h:10, from /<>/src/util.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/util.h:10, from /<>/src/util.cpp:7: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/util.h:10, from /<>/src/util.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/util.h:10, from /<>/src/util.cpp:7: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/util.h:10, from /<>/src/util.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 25%] Building CXX object CMakeFiles/Sibelia.dir/outputgenerator.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/outputgenerator.cpp.o -c /<>/src/outputgenerator.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/util.h:10, from /<>/src/outputgenerator.h:10, from /<>/src/outputgenerator.cpp:9: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/util.h:10, from /<>/src/outputgenerator.h:10, from /<>/src/outputgenerator.cpp:9: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/util.h:10, from /<>/src/outputgenerator.h:10, from /<>/src/outputgenerator.cpp:9: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/util.h:10, from /<>/src/outputgenerator.h:10, from /<>/src/outputgenerator.cpp:9: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/util.h:10, from /<>/src/outputgenerator.h:10, from /<>/src/outputgenerator.cpp:9: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 30%] Building CXX object CMakeFiles/Sibelia.dir/blockfinder.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/blockfinder.cpp.o -c /<>/src/blockfinder.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/blockfinder.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/blockfinder.cpp:7: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/blockfinder.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/blockfinder.cpp:7: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/blockfinder.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 35%] Building CXX object CMakeFiles/Sibelia.dir/blockinstance.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/blockinstance.cpp.o -c /<>/src/blockinstance.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockinstance.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 40%] Building CXX object CMakeFiles/Sibelia.dir/bifurcationstorage.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/bifurcationstorage.cpp.o -c /<>/src/bifurcationstorage.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/bifurcationstorage.h:11, from /<>/src/bifurcationstorage.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 45%] Building CXX object CMakeFiles/Sibelia.dir/bulgeremoval.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/bulgeremoval.cpp.o -c /<>/src/bulgeremoval.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/bulgeremoval.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/bulgeremoval.cpp:7: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/bulgeremoval.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/bulgeremoval.cpp:7: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/bulgeremoval.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 50%] Building CXX object CMakeFiles/Sibelia.dir/dnasequence.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/dnasequence.cpp.o -c /<>/src/dnasequence.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/dnasequence.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 55%] Building CXX object CMakeFiles/Sibelia.dir/edge.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/edge.cpp.o -c /<>/src/edge.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/edge.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/edge.cpp:7: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/edge.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/edge.cpp:7: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/edge.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 60%] Building CXX object CMakeFiles/Sibelia.dir/fasta.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/fasta.cpp.o -c /<>/src/fasta.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/fasta.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 65%] Building CXX object CMakeFiles/Sibelia.dir/serialization.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/serialization.cpp.o -c /<>/src/serialization.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/serialization.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/serialization.cpp:7: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/serialization.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/serialization.cpp:7: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/serialization.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 70%] Building CXX object CMakeFiles/Sibelia.dir/synteny.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/synteny.cpp.o -c /<>/src/synteny.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/synteny.cpp:9: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/synteny.cpp:9: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/synteny.cpp:9: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/blockfinder.h:11, from /<>/src/synteny.cpp:9: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/blockinstance.h:10, from /<>/src/blockfinder.h:10, from /<>/src/synteny.cpp:9: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 75%] Building CXX object CMakeFiles/Sibelia.dir/test/unrolledlisttest.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/test/unrolledlisttest.cpp.o -c /<>/src/test/unrolledlisttest.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/test/../common.h:31, from /<>/src/test/unrolledlisttest.h:10, from /<>/src/test/unrolledlisttest.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 80%] Building CXX object CMakeFiles/Sibelia.dir/platform.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/platform.cpp.o -c /<>/src/platform.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/platform.h:10, from /<>/src/platform.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object CMakeFiles/Sibelia.dir/stranditerator.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/stranditerator.cpp.o -c /<>/src/stranditerator.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/stranditerator.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [ 90%] Building CXX object CMakeFiles/Sibelia.dir/vertexenumeration.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/vertexenumeration.cpp.o -c /<>/src/vertexenumeration.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/hashing.h:10, from /<>/src/indexedsequence.h:10, from /<>/src/vertexenumeration.cpp:7: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /<>/src/vertexenumeration.cpp:7: /<>/src/indexedsequence.h:37:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 37 | std::auto_ptr sequence_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/hashing.h:10, from /<>/src/indexedsequence.h:10, from /<>/src/vertexenumeration.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/src/vertexenumeration.cpp:7: /<>/src/indexedsequence.h:38:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 38 | std::auto_ptr bifStorage_; | ^~~~~~~~ In file included from /usr/s390x-linux-gnu/include/c++/10/memory:83, from /<>/src/common.h:20, from /<>/src/fasta.h:10, from /<>/src/dnasequence.h:10, from /<>/src/hashing.h:10, from /<>/src/indexedsequence.h:10, from /<>/src/vertexenumeration.cpp:7: /usr/s390x-linux-gnu/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 95%] Building CXX object CMakeFiles/Sibelia.dir/resource.cpp.o /usr/bin/s390x-linux-gnu-g++ -I/<>/src/include -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -o CMakeFiles/Sibelia.dir/resource.cpp.o -c /<>/src/resource.cpp In file included from /usr/include/boost/bind.hpp:30, from /<>/src/common.h:31, from /<>/src/resource.h:6, from /<>/src/resource.cpp:6: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ [100%] Linking CXX executable Sibelia /usr/bin/cmake -E cmake_link_script CMakeFiles/Sibelia.dir/link.txt --verbose=1 /usr/bin/s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Sibelia.dir/sibelia.cpp.o CMakeFiles/Sibelia.dir/postprocessor.cpp.o CMakeFiles/Sibelia.dir/indexedsequence.cpp.o CMakeFiles/Sibelia.dir/util.cpp.o CMakeFiles/Sibelia.dir/outputgenerator.cpp.o CMakeFiles/Sibelia.dir/blockfinder.cpp.o CMakeFiles/Sibelia.dir/blockinstance.cpp.o CMakeFiles/Sibelia.dir/bifurcationstorage.cpp.o CMakeFiles/Sibelia.dir/bulgeremoval.cpp.o CMakeFiles/Sibelia.dir/dnasequence.cpp.o CMakeFiles/Sibelia.dir/edge.cpp.o CMakeFiles/Sibelia.dir/fasta.cpp.o CMakeFiles/Sibelia.dir/serialization.cpp.o CMakeFiles/Sibelia.dir/synteny.cpp.o CMakeFiles/Sibelia.dir/test/unrolledlisttest.cpp.o CMakeFiles/Sibelia.dir/platform.cpp.o CMakeFiles/Sibelia.dir/stranditerator.cpp.o CMakeFiles/Sibelia.dir/vertexenumeration.cpp.o CMakeFiles/Sibelia.dir/resource.cpp.o -o Sibelia -ldivsufsort make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' [100%] Built target Sibelia make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-s390x-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src dh_auto_install -a -O--sourcedirectory=src cd obj-s390x-linux-gnu && make -j1 install DESTDIR=/<>/sibelia-3.0.7\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -S/<>/src -B/<>/obj-s390x-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-s390x-linux-gnu/CMakeFiles /<>/obj-s390x-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-s390x-linux-gnu' make -f CMakeFiles/Sibelia.dir/build.make CMakeFiles/Sibelia.dir/depend make[3]: Entering directory '/<>/obj-s390x-linux-gnu' cd /<>/obj-s390x-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/src /<>/src /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu /<>/obj-s390x-linux-gnu/CMakeFiles/Sibelia.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' make -f CMakeFiles/Sibelia.dir/build.make CMakeFiles/Sibelia.dir/build make[3]: Entering directory '/<>/obj-s390x-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/Sibelia.dir/build'. make[3]: Leaving directory '/<>/obj-s390x-linux-gnu' [100%] Built target Sibelia make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-s390x-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-s390x-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-s390x-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/debian/tmp/usr/bin/Sibelia -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/NEWS.md -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/ANNOTATION.md -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/README.md -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/USAGE.md -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/INSTALL.md -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/SIBELIA.md -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/C-SIBELIA.md -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/LICENSE.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/C-Sibelia -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/C-Sibelia/Staphylococcus_aureus -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/C-Sibelia/Staphylococcus_aureus/RN4220.fasta -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/C-Sibelia/Staphylococcus_aureus/README.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/C-Sibelia/Staphylococcus_aureus/NCTC8325.fasta -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/C-Sibelia/Staphylococcus_aureus/variant.vcf -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/genomes_permutations.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.image.conf -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.highlight2.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.sequences.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.highlight4.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.highlight1.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.highlight.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.png -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.highlight3.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.segdup.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.svg -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/circos/circos.conf -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/coverage_report.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/Helicobacter_pylori.fasta -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/blocks_coords.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/README.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Helicobacter_pylori/d3_blocks_diagram.html -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/genomes_permutations.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos/circos.image.conf -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos/circos.sequences.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos/circos.highlight.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos/circos.png -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos/circos.segdup.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos/circos.svg -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/circos/circos.conf -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/coverage_report.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/blocks_coords.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/README.txt -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/Staphylococcus.fasta -- Installing: /<>/debian/tmp/usr/share/Sibelia/doc/examples/Sibelia/Staphylococcus_aureus/d3_blocks_diagram.html -- Installing: /<>/debian/tmp/usr/bin/C-Sibelia.py -- Installing: /<>/debian/tmp/usr/share/Sibelia/utils -- Installing: /<>/debian/tmp/usr/share/Sibelia/utils/hidemappedcontigs.py -- Installing: /<>/debian/tmp/usr/share/Sibelia/utils/sortsequences.py -- Installing: /<>/debian/tmp/usr/lib/Sibelia make[1]: Leaving directory '/<>/obj-s390x-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install find debian -name LICENSE.txt -delete find debian -name INSTALL.md -delete make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=src dh_installchangelogs -a -O--sourcedirectory=src debian/rules override_dh_installman-arch make[1]: Entering directory '/<>' dh_installman -a mv debian/sibelia/usr/share/man/py/man1/C-Sibelia.1 debian/sibelia/usr/share/man/man1/C-Sibelia.py.1 rm -rf debian/sibelia/usr/share/man/py make[1]: Leaving directory '/<>' dh_installinit -a -O--sourcedirectory=src dh_installsystemduser -a -O--sourcedirectory=src dh_lintian -a -O--sourcedirectory=src dh_perl -a -O--sourcedirectory=src dh_link -a -O--sourcedirectory=src dh_strip_nondeterminism -a -O--sourcedirectory=src dh_compress -a -O--sourcedirectory=src dh_fixperms -a -O--sourcedirectory=src dh_missing -a -O--sourcedirectory=src dh_dwz -a -O--sourcedirectory=src dh_strip -a -O--sourcedirectory=src dh_makeshlibs -a -O--sourcedirectory=src dh_shlibdeps -a -O--sourcedirectory=src dh_installdeb -a -O--sourcedirectory=src dh_gencontrol -a -O--sourcedirectory=src dh_md5sums -a -O--sourcedirectory=src dh_builddeb -a -O--sourcedirectory=src dpkg-deb: building package 'sibelia' in '../sibelia_3.0.7+dfsg-3_s390x.deb'. dpkg-deb: building package 'sibelia-dbgsym' in '../sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../sibelia_3.0.7+dfsg-3_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-08-07T08:34:54Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ sibelia_3.0.7+dfsg-3_s390x.changes: ----------------------------------- Format: 1.8 Date: Tue, 14 Apr 2020 10:29:51 +0200 Source: sibelia Binary: sibelia sibelia-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 3.0.7+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: sibelia - comparative genomics tool Closes: 956575 Changes: sibelia (3.0.7+dfsg-3) unstable; urgency=medium . * Enable binary-all builds Closes: #956575 Checksums-Sha1: 8c7c13716be53fecdc292846e34f3d79a8f880d1 3878140 sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb 144d2a57440a026000e3a4a8196b760145e6a169 6003 sibelia_3.0.7+dfsg-3_s390x.buildinfo 3443cb5d0379af89711346d279ffc9bc6a70bea6 283028 sibelia_3.0.7+dfsg-3_s390x.deb Checksums-Sha256: 3bf5db29c06fc81284a2d9140ccf1eee796e15f2bce25432070ba1f7ab506f76 3878140 sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb b313b911e0a3e7e687cebb83b37216eefef01b46666c7aac02088b3e9348941e 6003 sibelia_3.0.7+dfsg-3_s390x.buildinfo a168e791a3dd53bd8d97bce9f730d8aca117372662c02d967a950e8e1ca190fa 283028 sibelia_3.0.7+dfsg-3_s390x.deb Files: ff333948890df30a6cd3e157a7df7765 3878140 debug optional sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb 7331bce6a57d49174f7180683aac76a5 6003 science optional sibelia_3.0.7+dfsg-3_s390x.buildinfo 510ec003d3e4b93233a7cccff1148784 283028 science optional sibelia_3.0.7+dfsg-3_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: sibelia Binary: sibelia sibelia-dbgsym Architecture: s390x Version: 3.0.7+dfsg-3 Checksums-Md5: ff333948890df30a6cd3e157a7df7765 3878140 sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb 510ec003d3e4b93233a7cccff1148784 283028 sibelia_3.0.7+dfsg-3_s390x.deb Checksums-Sha1: 8c7c13716be53fecdc292846e34f3d79a8f880d1 3878140 sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb 3443cb5d0379af89711346d279ffc9bc6a70bea6 283028 sibelia_3.0.7+dfsg-3_s390x.deb Checksums-Sha256: 3bf5db29c06fc81284a2d9140ccf1eee796e15f2bce25432070ba1f7ab506f76 3878140 sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb a168e791a3dd53bd8d97bce9f730d8aca117372662c02d967a950e8e1ca190fa 283028 sibelia_3.0.7+dfsg-3_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 07 Aug 2021 08:34:54 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-14), automake (= 1:1.16.3-2), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 11.1), base-passwd (= 3.5.51), bash (= 5.1-3+b1), binutils (= 2.35.2-2), binutils-common (= 2.35.2-2), binutils-x86-64-linux-gnu (= 2.35.2-2), bsdextrautils (= 2.36.1-8), bsdutils (= 1:2.36.1-8), build-essential (= 12.9), bzip2 (= 1.0.8-4), cmake (= 3.18.4-2), cmake-data (= 3.18.4-2), coreutils (= 8.32-4+b1), cpp (= 4:10.2.1-1), cpp-10 (= 10.2.1-6), dash (= 0.5.11+git20210120+802ebd4-1), debconf (= 1.5.77), debhelper (= 13.3.4), debianutils (= 4.11.2), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.12.0-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), file (= 1:5.39-3), findutils (= 4.8.0-1), g++ (= 4:10.2.1-1), g++-10 (= 10.2.1-6), gcc (= 4:10.2.1-1), gcc-10 (= 10.2.1-6), gcc-10-base (= 10.2.1-6), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.6-1), groff-base (= 1.22.4-6), gzip (= 1.10-4), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-10), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.3-2+b1), libasan6 (= 10.2.1-6), libatomic1 (= 10.2.1-6), libattr1 (= 1:2.4.48-6), libaudit-common (= 1:3.0-2), libaudit1 (= 1:3.0-2), libbinutils (= 2.35.2-2), libblkid1 (= 2.36.1-8), libboost-dev (= 1.74.0.3), libboost1.74-dev (= 1.74.0-9), libbrotli1 (= 1.0.9-2+b2), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.31-13), libc-dev-bin (= 2.31-13), libc6 (= 2.31-13), libc6-dev (= 2.31-13), libcap-ng0 (= 0.7.9-2.2+b1), libcc1-0 (= 10.2.1-6), libcom-err2 (= 1.46.2-2), libcrypt-dev (= 1:4.4.18-5), libcrypt1 (= 1:4.4.18-5), libctf-nobfd0 (= 2.35.2-2), libctf0 (= 2.35.2-2), libcurl3-gnutls (= 7.74.0-1.3+b1), libcurl4 (= 7.74.0-1.3+b1), libcurl4-gnutls-dev (= 7.74.0-1.3+b1), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.260), libdebhelper-perl (= 13.3.4), libdeflate-dev (= 1.7-1), libdeflate0 (= 1.7-1), libdivsufsort-dev (= 2.0.1-5), libdivsufsort3 (= 2.0.1-5), libdpkg-perl (= 1.20.9), libelf1 (= 0.183-3), libexpat1 (= 2.2.10-2), libffi7 (= 3.3-6), libfile-stripnondeterminism-perl (= 1.12.0-1), libgcc-10-dev (= 10.2.1-6), libgcc-s1 (= 10.2.1-6), libgcrypt20 (= 1.8.7-6), libgdbm-compat4 (= 1.19-2), libgdbm6 (= 1.19-2), libgmp10 (= 2:6.2.1+dfsg-1), libgnutls30 (= 3.7.1-5), libgomp1 (= 10.2.1-6), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.18.3-6), libhogweed6 (= 3.7.3-1), libhts-dev (= 1.11-4), libhts3 (= 1.11-4), libicu67 (= 67.1-7), libidn2-0 (= 2.3.0-5), libisl23 (= 0.23-1), libitm1 (= 10.2.1-6), libjsoncpp24 (= 1.9.4-4), libk5crypto3 (= 1.18.3-6), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-6), libkrb5support0 (= 1.18.3-6), libldap-2.4-2 (= 2.4.57+dfsg-3), liblsan0 (= 10.2.1-6), liblz4-1 (= 1.9.3-2), liblzma-dev (= 5.2.5-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.39-3), libmagic1 (= 1:5.39-3), libmount1 (= 2.36.1-8), libmpc3 (= 1.2.0-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.2+20201114-2), libncursesw6 (= 6.2+20201114-2), libnettle8 (= 3.7.3-1), libnghttp2-14 (= 1.43.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.23.22-1), libpam-modules (= 1.4.0-9), libpam-modules-bin (= 1.4.0-9), libpam-runtime (= 1.4.0-9), libpam0g (= 1.4.0-9), libpcre2-8-0 (= 10.36-2), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-4), libpipeline1 (= 1.5.3-1), libprocps8 (= 2:3.3.17-5), libpsl5 (= 0.21.0-1.2), libquadmath0 (= 10.2.1-6), librhash0 (= 1.4.1-2), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg-2.1), libsasl2-modules-db (= 2.1.27+dfsg-2.1), libseccomp2 (= 2.5.1-1), libselinux1 (= 3.1-3), libseqan2-dev (= 2.4.0+dfsg-14), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.36.1-8), libssh2-1 (= 1.9.0-3), libssl1.1 (= 1.1.1k-1), libstdc++-10-dev (= 10.2.1-6), libstdc++6 (= 10.2.1-6), libsub-override-perl (= 0.09-2), libsystemd0 (= 247.3-6), libtasn1-6 (= 4.16.0-2), libtclap-dev (= 1.2.4-1), libtinfo6 (= 6.2+20201114-2), libtirpc-common (= 1.3.1-1), libtirpc-dev (= 1.3.1-1), libtirpc3 (= 1.3.1-1), libtool (= 2.4.6-15), libtsan0 (= 10.2.1-6), libubsan1 (= 10.2.1-6), libuchardet0 (= 0.0.7-1), libudev1 (= 247.3-6), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36.1-8), libuv1 (= 1.40.0-2), libxml2 (= 2.9.10+dfsg-6.7), libzstd1 (= 1.4.8+dfsg-2.1), linux-libc-dev (= 5.10.46-4), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2+20201114-2), ncurses-bin (= 6.2+20201114-2), patch (= 2.7.6-7), perl (= 5.32.1-4), perl-base (= 5.32.1-4), perl-modules-5.32 (= 5.32.1-4), po-debconf (= 1.0.21+nmu1), procps (= 2:3.3.17-5), sed (= 4.7-1), sensible-utils (= 0.0.14), sysvinit-utils (= 2.96-7), tar (= 1.34+dfsg-1), util-linux (= 2.36.1-8), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1586852991" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ sibelia-dbgsym_3.0.7+dfsg-3_s390x.deb ------------------------------------- new Debian package, version 2.0. size 3878140 bytes: control archive=540 bytes. 381 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: sibelia-dbgsym Source: sibelia Version: 3.0.7+dfsg-3 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 4042 Depends: sibelia (= 3.0.7+dfsg-3) Section: debug Priority: optional Description: debug symbols for sibelia Build-Ids: 60b0a03dcd82470181f614e7598240e5e656cab3 drwxr-xr-x root/root 0 2020-04-14 08:29 ./ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/lib/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/lib/debug/.build-id/60/ -rw-r--r-- root/root 4128112 2020-04-14 08:29 ./usr/lib/debug/.build-id/60/b0a03dcd82470181f614e7598240e5e656cab3.debug drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-04-14 08:29 ./usr/share/doc/sibelia-dbgsym -> sibelia sibelia_3.0.7+dfsg-3_s390x.deb ------------------------------ new Debian package, version 2.0. size 283028 bytes: control archive=1388 bytes. 977 bytes, 23 lines control 1226 bytes, 18 lines md5sums Package: sibelia Version: 3.0.7+dfsg-3 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 1132 Depends: libc6 (>= 2.4), libdivsufsort3 (>= 2.0.1), libgcc-s1 (>= 3.0), libstdc++6 (>= 9), python3, lagan Suggests: sibelia-examples Section: science Priority: optional Homepage: http://bioinf.spbau.ru/sibelia Description: comparative genomics tool Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms. . Sibelia is useful in finding: . 1) shared regions, 2) regions that present in one group of genomes but not in others, 3) rearrangements that transform one genome to other genomes. drwxr-xr-x root/root 0 2020-04-14 08:29 ./ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/bin/ -rwxr-xr-x root/root 23810 2020-04-14 08:29 ./usr/bin/C-Sibelia.py -rwxr-xr-x root/root 1083600 2020-04-14 08:29 ./usr/bin/Sibelia drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/Sibelia/ lrwxrwxrwx root/root 0 2020-04-14 08:29 ./usr/share/Sibelia/doc -> ../doc/sibelia drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/Sibelia/utils/ -rw-r--r-- root/root 3540 2018-02-06 17:54 ./usr/share/Sibelia/utils/hidemappedcontigs.py -rw-r--r-- root/root 1533 2018-02-06 17:54 ./usr/share/Sibelia/utils/sortsequences.py drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/doc/sibelia/ -rw-r--r-- root/root 1216 2018-02-06 17:54 ./usr/share/doc/sibelia/ANNOTATION.md -rw-r--r-- root/root 1957 2018-02-06 17:54 ./usr/share/doc/sibelia/C-SIBELIA.md.gz -rw-r--r-- root/root 1322 2018-02-06 17:54 ./usr/share/doc/sibelia/NEWS.md.gz -rw-r--r-- root/root 594 2020-04-14 08:29 ./usr/share/doc/sibelia/README.Debian -rw-r--r-- root/root 3082 2018-02-06 17:54 ./usr/share/doc/sibelia/README.md -rw-r--r-- root/root 278 2020-04-14 08:29 ./usr/share/doc/sibelia/README.test -rw-r--r-- root/root 6404 2018-02-06 17:54 ./usr/share/doc/sibelia/SIBELIA.md.gz -rw-r--r-- root/root 142 2018-02-06 17:54 ./usr/share/doc/sibelia/USAGE.md -rw-r--r-- root/root 321 2020-04-14 08:29 ./usr/share/doc/sibelia/changelog.Debian.gz -rw-r--r-- root/root 2793 2020-04-14 08:29 ./usr/share/doc/sibelia/copyright -rw-r--r-- root/root 453 2020-04-14 08:29 ./usr/share/doc/sibelia/run-unit-test drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/lintian/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 116 2020-04-14 08:29 ./usr/share/lintian/overrides/sibelia drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/man/ drwxr-xr-x root/root 0 2020-04-14 08:29 ./usr/share/man/man1/ -rw-r--r-- root/root 943 2020-04-14 08:29 ./usr/share/man/man1/C-Sibelia.py.1.gz -rw-r--r-- root/root 1296 2020-04-14 08:29 ./usr/share/man/man1/Sibelia.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [566 B] Get:5 copy:/<>/apt_archive ./ Packages [652 B] Fetched 2181 B in 0s (86.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libproc-processtable-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils readline-common sbuild-build-depends-lintian-dummy:s390x t1utils unzip 0 upgraded, 90 newly installed, 0 to remove and 0 not upgraded. Need to get 7624 kB of archives. After this operation, 21.7 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.1-2 [73.8 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.1-2 [168 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.4-1 [51.1 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-2 [547 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.34.1-3 [797 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-2 [927 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:11 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libpackage-stash-perl all 0.39-1 [21.9 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.118-1 [53.5 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.59-2+b1 [45.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.12-1+b1 [13.0 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.8-1+b1 [197 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012002-1 [351 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.82+repack-1+b1 [35.8 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-3 [88.5 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.104.0 [1265 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7624 kB in 0s (26.5 MB/s) Selecting previously unselected package readline-common. (Reading database ... 41639 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.1-2_all.deb ... Unpacking readline-common (8.1-2) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.1-2_amd64.deb ... Unpacking libreadline8:amd64 (8.1-2) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.4-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.4-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.27-2_amd64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.34.1-3_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.34.1-3) ... Selecting previously unselected package gpg. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 139168 Build-Time: 113 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 41 Job: sibelia_3.0.7+dfsg-3 Lintian: pass Machine Architecture: amd64 Package: sibelia Package-Time: 164 Source-Version: 3.0.7+dfsg-3 Space: 139168 Status: successful Version: 3.0.7+dfsg-3 -------------------------------------------------------------------------------- Finished at 2021-08-07T08:34:54Z Build needed 00:02:44, 139168k disk space