sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | sim4 0.0.20121010-5 (mipsel) Thu, 21 Mar 2019 18:40:19 +0000 | +==============================================================================+ Package: sim4 Version: 0.0.20121010-5 Source Version: 0.0.20121010-5 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-f4976e65-d1a3-4b9b-b4ee-c9df9d691232' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-21-0210.00.pdiff [12.3 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-21-1409.56.pdiff [4068 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-21-1409.56.pdiff [4068 B] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-21-0210.00.pdiff [4371 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-21-1409.56.pdiff [16.2 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main mipsel Packages [8012 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-21-1409.56.pdiff [16.2 kB] Fetched 8347 kB in 2s (4774 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'sim4' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/sim4.git Please use: git clone https://salsa.debian.org/med-team/sim4.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 379 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main sim4 0.0.20121010-5 (dsc) [2015 B] Get:2 http://debian.oregonstate.edu/debian unstable/main sim4 0.0.20121010-5 (tar) [61.2 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main sim4 0.0.20121010-5 (diff) [315 kB] Fetched 379 kB in 0s (2691 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/sim4-W1Z9St/sim4-0.0.20121010' with '<>' I: NOTICE: Log filtering will replace 'build/sim4-W1Z9St' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-VlQWu7/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-VlQWu7/apt_archive ./ InRelease Get:2 copy:/<>/resolver-VlQWu7/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-VlQWu7/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-VlQWu7/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-VlQWu7/apt_archive ./ Packages [451 B] Fetched 1771 B in 0s (101 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-mipsel-linux-gnu cpp-8-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel dpkg-cross file g++-8-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-8-cross-base gcc-8-mipsel-linux-gnu gcc-8-mipsel-linux-gnu-base gcc-mipsel-linux-gnu libatomic1-mipsel-cross libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mipsel-cross libgcc1-mipsel-cross libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mipsel-cross libstdc++6-mipsel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mipsel-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch g++-8-multilib-mipsel-linux-gnu gcc-8-doc libstdc++6-8-dbg-mipsel-cross gcc-8-multilib-mipsel-linux-gnu libgcc1-dbg-mipsel-cross libgomp1-dbg-mipsel-cross libitm1-dbg-mipsel-cross libatomic1-dbg-mipsel-cross libasan5-dbg-mipsel-cross liblsan0-dbg-mipsel-cross libtsan0-dbg-mipsel-cross libubsan1-dbg-mipsel-cross libmpx2-dbg-mipsel-cross libquadmath0-dbg-mipsel-cross manpages-dev autoconf automake libtool flex bison gdb-mipsel-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-mipsel-linux-gnu cpp-8-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel dpkg-cross file g++-8-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-8-cross-base gcc-8-mipsel-linux-gnu gcc-8-mipsel-linux-gnu-base gcc-mipsel-linux-gnu libatomic1-mipsel-cross libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mipsel-cross libgcc1-mipsel-cross libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mipsel-cross libstdc++6-mipsel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mipsel-cross sbuild-build-depends-core-dummy:mipsel sensible-utils ucf 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 40.0 MB of archives. After this operation, 146 MB of additional disk space will be used. Get:1 copy:/<>/resolver-VlQWu7/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mipsel-linux-gnu amd64 2.31.1-15 [2490 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mipsel-linux-gnu-base amd64 8.3.0-2cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-mipsel-linux-gnu amd64 8.3.0-2cross1 [6282 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mipsel-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-2cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mipsel-cross all 2.28-7cross1 [1229 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mipsel-cross all 1:8.3.0-2cross1 [46.1 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mipsel-cross all 8.3.0-2cross1 [69.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mipsel-cross all 8.3.0-2cross1 [6688 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-mipsel-cross all 8.3.0-2cross1 [211 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mipsel-linux-gnu amd64 8.3.0-2cross1 [6689 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mipsel-linux-gnu amd64 4:8.3.0-1 [1452 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mipsel-cross all 8.3.0-2cross1 [311 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mipsel-cross all 4.19.20-1cross1 [1223 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mipsel-cross all 2.28-7cross1 [2317 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-mipsel-cross all 8.3.0-2cross1 [1535 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-mipsel-linux-gnu amd64 8.3.0-2cross1 [6855 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mipsel-linux-gnu amd64 4:8.3.0-1 [1172 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mipsel all 12.6 [6564 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.0 MB in 1s (78.2 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11931 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package binutils-mipsel-linux-gnu. Preparing to unpack .../06-binutils-mipsel-linux-gnu_2.31.1-15_amd64.deb ... Unpacking binutils-mipsel-linux-gnu (2.31.1-15) ... Selecting previously unselected package gcc-8-mipsel-linux-gnu-base:amd64. Preparing to unpack .../07-gcc-8-mipsel-linux-gnu-base_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-mipsel-linux-gnu-base:amd64 (8.3.0-2cross1) ... Selecting previously unselected package cpp-8-mipsel-linux-gnu. Preparing to unpack .../08-cpp-8-mipsel-linux-gnu_8.3.0-2cross1_amd64.deb ... Unpacking cpp-8-mipsel-linux-gnu (8.3.0-2cross1) ... Selecting previously unselected package cpp-mipsel-linux-gnu. Preparing to unpack .../09-cpp-mipsel-linux-gnu_4%3a8.3.0-1_amd64.deb ... Unpacking cpp-mipsel-linux-gnu (4:8.3.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../10-cross-config_2.6.15-2_all.deb ... Unpacking cross-config (2.6.15-2) ... 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Preparing to unpack .../16-libgcc-8-dev-mipsel-cross_8.3.0-2cross1_all.deb ... Unpacking libgcc-8-dev-mipsel-cross (8.3.0-2cross1) ... Selecting previously unselected package gcc-8-mipsel-linux-gnu. Preparing to unpack .../17-gcc-8-mipsel-linux-gnu_8.3.0-2cross1_amd64.deb ... Unpacking gcc-8-mipsel-linux-gnu (8.3.0-2cross1) ... Selecting previously unselected package gcc-mipsel-linux-gnu. Preparing to unpack .../18-gcc-mipsel-linux-gnu_4%3a8.3.0-1_amd64.deb ... Unpacking gcc-mipsel-linux-gnu (4:8.3.0-1) ... Selecting previously unselected package libstdc++6-mipsel-cross. Preparing to unpack .../19-libstdc++6-mipsel-cross_8.3.0-2cross1_all.deb ... Unpacking libstdc++6-mipsel-cross (8.3.0-2cross1) ... Selecting previously unselected package linux-libc-dev-mipsel-cross. Preparing to unpack .../20-linux-libc-dev-mipsel-cross_4.19.20-1cross1_all.deb ... Unpacking linux-libc-dev-mipsel-cross (4.19.20-1cross1) ... Selecting previously unselected package libc6-dev-mipsel-cross. 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Preparing to unpack .../26-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../27-libicu63_63.1-6_amd64.deb ... Unpacking libicu63:amd64 (63.1-6) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../28-libxml2_2.9.4+dfsg1-7+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../29-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../30-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../31-libxml-sax-perl_1.00+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.00+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../32-libxml-libxml-perl_2.0134+dfsg-1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../33-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../34-libyaml-perl_1.27-1_all.deb ... Unpacking libyaml-perl (1.27-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../35-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../36-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../37-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../38-libdebian-dpkgcross-perl_2.6.15-2_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-2) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../39-dpkg-cross_2.6.15-2_all.deb ... Unpacking dpkg-cross (2.6.15-2) ... Selecting previously unselected package crossbuild-essential-mipsel. Preparing to unpack .../40-crossbuild-essential-mipsel_12.6_all.deb ... Unpacking crossbuild-essential-mipsel (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:mipsel. Preparing to unpack .../41-sbuild-build-depends-core-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-core-dummy:mipsel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-2cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libc6-mipsel-cross (2.28-7cross1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libatomic1-mipsel-cross (8.3.0-2cross1) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-2) ... Setting up libgcc1-mipsel-cross (1:8.3.0-2cross1) ... Setting up binutils-mipsel-linux-gnu (2.31.1-15) ... Setting up libgomp1-mipsel-cross (8.3.0-2cross1) ... Setting up gcc-8-mipsel-linux-gnu-base:amd64 (8.3.0-2cross1) ... Setting up linux-libc-dev-mipsel-cross (4.19.20-1cross1) ... Setting up sensible-utils (0.0.12) ... Setting up cpp-8-mipsel-linux-gnu (8.3.0-2cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgcc-8-dev-mipsel-cross (8.3.0-2cross1) ... Setting up libc6-dev-mipsel-cross (2.28-7cross1) ... Setting up libstdc++6-mipsel-cross (8.3.0-2cross1) ... Setting up cpp-mipsel-linux-gnu (4:8.3.0-1) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++-8-dev-mipsel-cross (8.3.0-2cross1) ... Setting up gcc-8-mipsel-linux-gnu (8.3.0-2cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mipsel-linux-gnu (4:8.3.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-8-mipsel-linux-gnu (8.3.0-2cross1) ... Setting up g++-mipsel-linux-gnu (4:8.3.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-mipsel (12.6) ... Setting up sbuild-build-depends-core-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-VlQWu7/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-VlQWu7/apt_archive ./ InRelease Get:2 copy:/<>/resolver-VlQWu7/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-VlQWu7/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-VlQWu7/apt_archive ./ Sources [482 B] Get:5 copy:/<>/resolver-VlQWu7/apt_archive ./ Packages [571 B] Fetched 2016 B in 0s (0 B/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:mipsel 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-VlQWu7/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:mipsel. (Reading database ... 15102 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-essential-dummy:mipsel (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:mipsel (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~) dpkg-deb: building package 'sbuild-build-depends-sim4-dummy' in '/<>/resolver-VlQWu7/apt_archive/sbuild-build-depends-sim4-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-sim4-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-VlQWu7/apt_archive ./ InRelease Get:2 copy:/<>/resolver-VlQWu7/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-VlQWu7/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-VlQWu7/apt_archive ./ Sources [629 B] Get:5 copy:/<>/resolver-VlQWu7/apt_archive ./ Packages [711 B] Fetched 2303 B in 0s (133 kB/s) Reading package lists... Reading package lists... Install sim4 build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mipsel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libbsd0 libc6:mipsel libc6-dev:mipsel libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mipsel libgcc1:mipsel libglib2.0-0 libgomp1:mipsel libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:mipsel libstdc++6:mipsel libtool libuchardet0 linux-libc-dev:mipsel m4 man-db po-debconf Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel manpages-dev:mipsel libstdc++-8-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mipsel libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mipsel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libbsd0 libc6:mipsel libc6-dev:mipsel libcroco3 libelf1 libfile-stripnondeterminism-perl libgcc-8-dev:mipsel libgcc1:mipsel libglib2.0-0 libgomp1:mipsel libncurses6 libpipeline1 libsigsegv2 libstdc++-8-dev:mipsel libstdc++6:mipsel libtool libuchardet0 linux-libc-dev:mipsel m4 man-db po-debconf sbuild-build-depends-sim4-dummy:mipsel 0 upgraded, 38 newly installed, 0 to remove and 0 not upgraded. Need to get 17.9 MB of archives. After this operation, 79.6 MB of additional disk space will be used. Get:1 copy:/<>/resolver-VlQWu7/apt_archive ./ sbuild-build-depends-sim4-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-8-base mipsel 8.3.0-3 [190 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc1 mipsel 1:8.3.0-3 [46.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main mipsel libc6 mipsel 2.28-8 [2424 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main mipsel libatomic1 mipsel 8.3.0-3 [6700 B] Get:33 http://debian.oregonstate.edu/debian unstable/main mipsel linux-libc-dev mipsel 4.19.28-2 [1152 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main mipsel libc6-dev mipsel 2.28-8 [2322 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main mipsel libgomp1 mipsel 8.3.0-3 [70.9 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-8-dev mipsel 8.3.0-3 [210 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++6 mipsel 8.3.0-3 [348 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++-8-dev mipsel 8.3.0-3 [1553 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 17.9 MB in 0s (72.1 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15102 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../13-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../14-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../15-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../16-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../17-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../18-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package dwz. Preparing to unpack .../19-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../20-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../21-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../22-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../23-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../24-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../25-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../26-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package gcc-8-base:mipsel. Preparing to unpack .../27-gcc-8-base_8.3.0-3_mipsel.deb ... Unpacking gcc-8-base:mipsel (8.3.0-3) ... Selecting previously unselected package libgcc1:mipsel. Preparing to unpack .../28-libgcc1_1%3a8.3.0-3_mipsel.deb ... Unpacking libgcc1:mipsel (1:8.3.0-3) ... Selecting previously unselected package libc6:mipsel. Preparing to unpack .../29-libc6_2.28-8_mipsel.deb ... Unpacking libc6:mipsel (2.28-8) ... Selecting previously unselected package libatomic1:mipsel. Preparing to unpack .../30-libatomic1_8.3.0-3_mipsel.deb ... Unpacking libatomic1:mipsel (8.3.0-3) ... Selecting previously unselected package linux-libc-dev:mipsel. Preparing to unpack .../31-linux-libc-dev_4.19.28-2_mipsel.deb ... Unpacking linux-libc-dev:mipsel (4.19.28-2) ... Selecting previously unselected package libc6-dev:mipsel. Preparing to unpack .../32-libc6-dev_2.28-8_mipsel.deb ... Unpacking libc6-dev:mipsel (2.28-8) ... Selecting previously unselected package libgomp1:mipsel. Preparing to unpack .../33-libgomp1_8.3.0-3_mipsel.deb ... Unpacking libgomp1:mipsel (8.3.0-3) ... Selecting previously unselected package libgcc-8-dev:mipsel. Preparing to unpack .../34-libgcc-8-dev_8.3.0-3_mipsel.deb ... Unpacking libgcc-8-dev:mipsel (8.3.0-3) ... Selecting previously unselected package libstdc++6:mipsel. Preparing to unpack .../35-libstdc++6_8.3.0-3_mipsel.deb ... Unpacking libstdc++6:mipsel (8.3.0-3) ... Selecting previously unselected package libstdc++-8-dev:mipsel. Preparing to unpack .../36-libstdc++-8-dev_8.3.0-3_mipsel.deb ... Unpacking libstdc++-8-dev:mipsel (8.3.0-3) ... Selecting previously unselected package sbuild-build-depends-sim4-dummy:mipsel. Preparing to unpack .../37-sbuild-build-depends-sim4-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-sim4-dummy:mipsel (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:mipsel (4.19.28-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:mipsel (8.3.0-3) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:mipsel (2.28-8) ... Setting up libc6-dev:mipsel (2.28-8) ... Setting up libgcc1:mipsel (1:8.3.0-3) ... Setting up libgomp1:mipsel (8.3.0-3) ... Setting up dh-autoreconf (19) ... Setting up libatomic1:mipsel (8.3.0-3) ... Setting up libgcc-8-dev:mipsel (8.3.0-3) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libstdc++6:mipsel (8.3.0-3) ... Setting up libstdc++-8-dev:mipsel (8.3.0-3) ... Setting up debhelper (12.1.1) ... Setting up sbuild-build-depends-sim4-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-15 dpkg-dev_1.19.5 g++-8_8.3.0-3 gcc-8_8.3.0-3 libc6-dev_2.28-8 libstdc++-8-dev_8.3.0-3 libstdc++-8-dev-mipsel-cross_8.3.0-2cross1 libstdc++6_8.3.0-3 libstdc++6-mipsel-cross_8.3.0-2cross1 linux-libc-dev_4.19.28-2 Package versions: adduser_3.118 apt_1.8.0 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-15 binutils-common_2.31.1-15 binutils-mipsel-linux-gnu_2.31.1-15 binutils-x86-64-linux-gnu_2.31.1-15 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-3 cpp-8-mipsel-linux-gnu_8.3.0-2cross1 cpp-mipsel-linux-gnu_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-mipsel_12.6 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dpkg_1.19.5 dpkg-cross_2.6.15-2 dpkg-dev_1.19.5 dwz_0.12-3 e2fsprogs_1.45.0-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-3 g++-8-mipsel-linux-gnu_8.3.0-2cross1 g++-mipsel-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-3 gcc-8-base_8.3.0-3 gcc-8-cross-base_8.3.0-2cross1 gcc-8-mipsel-linux-gnu_8.3.0-2cross1 gcc-8-mipsel-linux-gnu-base_8.3.0-2cross1 gcc-mipsel-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.0 libarchive-zip-perl_1.64-1 libasan5_8.3.0-3 libatomic1_8.3.0-3 libatomic1-mipsel-cross_8.3.0-2cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-15 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-8 libc-dev-bin_2.28-8 libc6_2.28-8 libc6-dev_2.28-8 libc6-dev-mipsel-cross_2.28-7cross1 libc6-mipsel-cross_2.28-7cross1 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-3 libcom-err2_1.45.0-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.248 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.5 libelf1_0.176-1 libext2fs2_1.45.0-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-3 libgcc-8-dev-mipsel-cross_8.3.0-2cross1 libgcc1_1:8.3.0-3 libgcc1-mipsel-cross_1:8.3.0-2cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-3 libgomp1_8.3.0-3 libgomp1-mipsel-cross_8.3.0-2cross1 libgpg-error0_1.35-1 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-3 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-3 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-5 libpipeline1_1.5.1-2 libquadmath0_8.3.0-3 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.0-1 libstdc++-8-dev_8.3.0-3 libstdc++-8-dev-mipsel-cross_8.3.0-2cross1 libstdc++6_8.3.0-3 libstdc++6-mipsel-cross_8.3.0-2cross1 libsystemd0_241-2 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-3 libubsan1_8.3.0-3 libuchardet0_0.0.6-3 libudev1_241-2 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.28-2 linux-libc-dev-mipsel-cross_4.19.20-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-5 perl-base_5.28.1-5 perl-modules-5.28_5.28.1-5 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-sim4-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-2 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jul 17 18:26:30 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./sim4_0.0.20121010-5.dsc dpkg-source: info: extracting sim4 in /<> dpkg-source: info: unpacking sim4_0.0.20121010.orig.tar.gz dpkg-source: info: unpacking sim4_0.0.20121010-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying compilation_order.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-f4976e65-d1a3-4b9b-b4ee-c9df9d691232 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package sim4 dpkg-buildpackage: info: source version 0.0.20121010-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel fakeroot debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f sim4 *.o make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=mipsel-linux-gnu-pkg-config CXX=mipsel-linux-gnu-g\+\+ CC=mipsel-linux-gnu-gcc make[1]: Entering directory '/<>' mipsel-linux-gnu-gcc -o sim4 -I. -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -Wall `LC_ALL=C ls *.c` -lm -Wl,-z,relro Xtend1.c:12:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ align.c:13:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ args.c:7:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ discrim.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ dna.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ encoding.c:52:20: warning: 'osx_linker_bug' defined but not used [-Wunused-variable] static const char *osx_linker_bug = ""; ^~~~~~~~~~~~~~ encoding.c:3:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ misc.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ poly.c: In function 'remove_polyA_back': poly.c:108:29: warning: variable 'prev' set but not used [-Wunused-but-set-variable] Exon *t, *exons_tail, *prev; /* start from Lblock */ ^~~~ At top level: poly.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = "$Id: poly.c,v 1.5 2002/03/03 23:29:48 florea Exp $"; ^~~~~ prnt.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ seq.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ seq_read.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ sim4.init.c: In function 'cds_range': sim4.init.c:672:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (*s!='.') fatal ("Illegal CDS specification."); s++; ^~ sim4.init.c:672:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' if (*s!='.') fatal ("Illegal CDS specification."); s++; ^ sim4.init.c:673:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (*s!='.') fatal ("Illegal CDS specification."); s++; ^~ sim4.init.c:673:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' if (*s!='.') fatal ("Illegal CDS specification."); s++; ^ At top level: sim4.init.c:61:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ sim4b1.c: In function 'find_ends': sim4b1.c:1523:27: warning: this 'if' clause does not guard... [-Wmisleading-indentation] if (j>=j0) return (i-(j-j0)); break; ^~ sim4b1.c:1523:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' if (j>=j0) return (i-(j-j0)); break; ^~~~~ At top level: sim4b1.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ splice.c: In function 'splice': splice.c:45:67: warning: variable 'keep_Gi' set but not used [-Wunused-but-set-variable] int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; ^~~~~~~ splice.c:45:58: warning: variable 'keep_Ci' set but not used [-Wunused-but-set-variable] int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; ^~~~~~~ At top level: splice.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] static const char rcsid[] = ^~~~~ make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a dh_auto_install -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'sim4' in '../sim4_0.0.20121010-5_mipsel.deb'. dpkg-deb: building package 'sim4-dbgsym' in '../sim4-dbgsym_0.0.20121010-5_mipsel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../sim4_0.0.20121010-5_mipsel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-03-21T18:41:01Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-VlQWu7/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-sim4-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-VlQWu7/apt_archive ./ InRelease Get:2 copy:/<>/resolver-VlQWu7/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-VlQWu7/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-VlQWu7/apt_archive ./ Sources [749 B] Get:5 copy:/<>/resolver-VlQWu7/apt_archive ./ Packages [825 B] Fetched 2537 B in 0s (151 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mipsel t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7775 kB of archives. After this operation, 20.8 MB of additional disk space will be used. Get:1 copy:/<>/resolver-VlQWu7/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-1 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-1 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-1 [867 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.11.0 [1187 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7775 kB in 0s (49.1 MB/s) Selecting previously unselected package netbase. 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ sim4_0.0.20121010-5_mipsel.changes: ----------------------------------- Format: 1.8 Date: Tue, 17 Jul 2018 20:24:34 +0200 Source: sim4 Binary: sim4 sim4-dbgsym Built-For-Profiles: cross nocheck Architecture: mipsel Version: 0.0.20121010-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: sim4 - tool for aligning cDNA and genomic DNA Changes: sim4 (0.0.20121010-5) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.5 Checksums-Sha1: 4f0dd5a22cfdc640d4042be662983e70b4b9b6c8 110708 sim4-dbgsym_0.0.20121010-5_mipsel.deb a443bb3b26d710568c72c98f4a81c01d3278d4db 4443 sim4_0.0.20121010-5_mipsel.buildinfo 6ac9aa8c8a059d87d9b09dbfd522bc068be41788 394904 sim4_0.0.20121010-5_mipsel.deb Checksums-Sha256: 0137545d0ec3a3fc4f21b68745e86743925c640edc15cbe430cc3d28bfecfc87 110708 sim4-dbgsym_0.0.20121010-5_mipsel.deb 36f5e3677169d203425f0210df14d3bf40e3e68f1af7211db58fa4787ac076b9 4443 sim4_0.0.20121010-5_mipsel.buildinfo 77df84249888b0aa98e3fa4269d7b56088ad2f4ee9d736cc4b5afbf4858a30f0 394904 sim4_0.0.20121010-5_mipsel.deb Files: 33a5ea17f54481e6edd67d12100f7585 110708 debug optional sim4-dbgsym_0.0.20121010-5_mipsel.deb 706b78a60ac52e277df1d9b11c2fdb2f 4443 science optional sim4_0.0.20121010-5_mipsel.buildinfo 3637aac85596b928af6569c1c592e5b2 394904 science optional sim4_0.0.20121010-5_mipsel.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: sim4 Binary: sim4 Architecture: mipsel Version: 0.0.20121010-5 Checksums-Md5: 33a5ea17f54481e6edd67d12100f7585 110708 sim4-dbgsym_0.0.20121010-5_mipsel.deb 3637aac85596b928af6569c1c592e5b2 394904 sim4_0.0.20121010-5_mipsel.deb Checksums-Sha1: 4f0dd5a22cfdc640d4042be662983e70b4b9b6c8 110708 sim4-dbgsym_0.0.20121010-5_mipsel.deb 6ac9aa8c8a059d87d9b09dbfd522bc068be41788 394904 sim4_0.0.20121010-5_mipsel.deb Checksums-Sha256: 0137545d0ec3a3fc4f21b68745e86743925c640edc15cbe430cc3d28bfecfc87 110708 sim4-dbgsym_0.0.20121010-5_mipsel.deb 77df84249888b0aa98e3fa4269d7b56088ad2f4ee9d736cc4b5afbf4858a30f0 394904 sim4_0.0.20121010-5_mipsel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 21 Mar 2019 18:41:00 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-15), binutils-common (= 2.31.1-15), binutils-x86-64-linux-gnu (= 2.31.1-15), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-3), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-2), dpkg (= 1.19.5), dpkg-dev (= 1.19.5), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-3), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-3), gcc-8-base (= 8.3.0-3), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-3), libatomic1 (= 8.3.0-3), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-15), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-8), libc-dev-bin (= 2.28-8), libc6 (= 2.28-8), libc6-dev (= 2.28-8), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-3), libcroco3 (= 0.6.12-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.248), libdpkg-perl (= 1.19.5), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-3), libgcc1 (= 1:8.3.0-3), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgomp1 (= 8.3.0-3), libgpg-error0 (= 1.35-1), libicu63 (= 63.1-6), libisl19 (= 0.20-2), libitm1 (= 8.3.0-3), liblsan0 (= 8.3.0-3), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-3), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-5), libpipeline1 (= 1.5.1-2), libquadmath0 (= 8.3.0-3), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libstdc++-8-dev (= 8.3.0-3), libstdc++6 (= 8.3.0-3), libsystemd0 (= 241-2), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-3), libubsan1 (= 8.3.0-3), libuchardet0 (= 0.0.6-3), libudev1 (= 241-2), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), linux-libc-dev (= 4.19.28-2), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), patch (= 2.7.6-3), perl (= 5.28.1-5), perl-base (= 5.28.1-5), perl-modules-5.28 (= 5.28.1-5), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1531851874" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ sim4-dbgsym_0.0.20121010-5_mipsel.deb ------------------------------------- new Debian package, version 2.0. size 110708 bytes: control archive=540 bytes. 373 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: sim4-dbgsym Source: sim4 Version: 0.0.20121010-5 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 128 Depends: sim4 (= 0.0.20121010-5) Section: debug Priority: optional Description: debug symbols for sim4 Build-Ids: d38452db09c2839e231885af59335a0b2efaf7c0 drwxr-xr-x root/root 0 2018-07-17 18:24 ./ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/lib/debug/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/lib/debug/.build-id/d3/ -rw-r--r-- root/root 119952 2018-07-17 18:24 ./usr/lib/debug/.build-id/d3/8452db09c2839e231885af59335a0b2efaf7c0.debug drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/doc/ lrwxrwxrwx root/root 0 2018-07-17 18:24 ./usr/share/doc/sim4-dbgsym -> sim4 sim4_0.0.20121010-5_mipsel.deb ------------------------------ new Debian package, version 2.0. size 394904 bytes: control archive=1220 bytes. 1248 bytes, 24 lines control 477 bytes, 7 lines md5sums Package: sim4 Version: 0.0.20121010-5 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 460 Depends: libc6 (>= 2.7) Section: science Priority: optional Homepage: http://globin.bx.psu.edu/html/docs/sim4.html Description: tool for aligning cDNA and genomic DNA sim4 is a similarity-based tool for aligning an expressed DNA sequence (EST, cDNA, mRNA) with a genomic sequence for the gene. It also detects end matches when the two input sequences overlap at one end (i.e., the start of one sequence overlaps the end of the other). . sim4 employs a blast-based technique to first determine the basic matching blocks representing the "exon cores". In this first stage, it detects all possible exact matches of W-mers (i.e., DNA words of size W) between the two sequences and extends them to maximal scoring gap-free segments. In the second stage, the exon cores are extended into the adjacent as-yet-unmatched fragments using greedy alignment algorithms, and heuristics are used to favor configurations that conform to the splice-site recognition signals (GT-AG, CT-AC). If necessary, the process is repeated with less stringent parameters on the unmatched fragments. drwxr-xr-x root/root 0 2018-07-17 18:24 ./ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/bin/ -rwxr-xr-x root/root 104860 2018-07-17 18:24 ./usr/bin/sim4 drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/doc/sim4/ -rw-r--r-- root/root 1084 2018-07-17 18:24 ./usr/share/doc/sim4/changelog.Debian.gz -rw-r--r-- root/root 94 2012-10-10 14:36 ./usr/share/doc/sim4/changelog.gz -rw-r--r-- root/root 1332 2018-07-17 18:24 ./usr/share/doc/sim4/copyright drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/doc/sim4/examples/ -rw-r--r-- root/root 5527 2018-07-17 18:24 ./usr/share/doc/sim4/examples/sample.cdna.fasta.gz -rw-r--r-- root/root 339023 2018-07-17 18:24 ./usr/share/doc/sim4/examples/sample.gen.fasta.gz drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/man/ drwxr-xr-x root/root 0 2018-07-17 18:24 ./usr/share/man/man1/ -rw-r--r-- root/root 3296 2018-07-17 18:24 ./usr/share/man/man1/sim4.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 3236 Build-Time: 11 Distribution: unstable Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 20 Job: sim4_0.0.20121010-5 Lintian: pass Machine Architecture: amd64 Package: sim4 Package-Time: 42 Source-Version: 0.0.20121010-5 Space: 3236 Status: successful Version: 0.0.20121010-5 -------------------------------------------------------------------------------- Finished at 2019-03-21T18:41:01Z Build needed 00:00:42, 3236k disk space