sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | sim4 0.0.20121010-8 (ppc64el) Tue, 15 Oct 2024 17:09:05 +0000 | +==============================================================================+ Package: sim4 Version: 0.0.20121010-8 Source Version: 0.0.20121010-8 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-95100f5d-8bc3-467c-965b-32fd0bccfbfc' with '<>' I: NOTICE: Log filtering will replace 'build/sim4-vUq4Oy/resolver-HLHqmx' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [202 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-10-15-1411.47-F-2024-10-15-0300.55.pdiff [36.2 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-10-15-1411.47-F-2024-10-15-0300.55.pdiff [172 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2024-10-15-1411.47-F-2024-10-15-0300.55.pdiff [36.2 kB] Get:6 http://localhost:3142/debian sid/main ppc64el Packages [9835 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2024-10-15-1411.47-F-2024-10-15-0300.55.pdiff [172 kB] Fetched 10.4 MB in 3s (3557 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libdb5.3t64 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 704 kB of archives. After this operation, 16.4 kB of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 704 kB in 0s (70.0 MB/s) (Reading database ... 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Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'sim4' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/sim4.git Please use: git clone https://salsa.debian.org/med-team/sim4.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 379 kB of source archives. Get:1 http://localhost:3142/debian sid/main sim4 0.0.20121010-8 (dsc) [1978 B] Get:2 http://localhost:3142/debian sid/main sim4 0.0.20121010-8 (tar) [61.2 kB] Get:3 http://localhost:3142/debian sid/main sim4 0.0.20121010-8 (diff) [316 kB] Fetched 379 kB in 1s (475 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/sim4-vUq4Oy/sim4-0.0.20121010' with '<>' I: NOTICE: Log filtering will replace 'build/sim4-vUq4Oy' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [720 B] Get:5 copy:/<>/apt_archive ./ Packages [765 B] Fetched 2094 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following packages were automatically installed and are no longer required: login mount tzdata Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-14-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-14-base:ppc64el gcc-14-cross-base gcc-14-powerpc64le-linux-gnu gcc-14-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:ppc64el libgcc-14-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libicu72 libitm1:ppc64el libitm1-ppc64el-cross liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libstdc++-14-dev:ppc64el libstdc++-14-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml2 linux-libc-dev-ppc64el-cross m4 man-db po-debconf sensible-utils Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el libstdc++-14-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:ppc64el libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-14-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-14-base:ppc64el gcc-14-cross-base gcc-14-powerpc64le-linux-gnu gcc-14-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:ppc64el libgcc-14-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libicu72 libitm1:ppc64el libitm1-ppc64el-cross liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libstdc++-14-dev:ppc64el libstdc++-14-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libtool libtsan2:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml2 linux-libc-dev-ppc64el-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:ppc64el sensible-utils 0 upgraded, 74 newly installed, 0 to remove and 0 not upgraded. Need to get 99.0 MB of archives. After this operation, 419 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get:5 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-3 [42.9 kB] Get:6 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:7 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get:8 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:9 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.40.2-9 [97.2 kB] Get:10 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:11 http://localhost:3142/debian sid/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:12 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:13 http://localhost:3142/debian sid/main amd64 autoconf all 2.72-3 [493 kB] Get:14 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:15 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:16 http://localhost:3142/debian sid/main amd64 autopoint all 0.22.5-2 [723 kB] Get:17 http://localhost:3142/debian sid/main amd64 binutils-powerpc64le-linux-gnu amd64 2.43.1-5 [2832 kB] Get:18 http://localhost:3142/debian sid/main amd64 gcc-14-powerpc64le-linux-gnu-base amd64 14.2.0-6cross1 [47.0 kB] Get:19 http://localhost:3142/debian sid/main amd64 cpp-14-powerpc64le-linux-gnu amd64 14.2.0-6cross1 [10.2 MB] Get:20 http://localhost:3142/debian sid/main amd64 cpp-powerpc64le-linux-gnu amd64 4:14.2.0-1 [4860 B] Get:21 http://localhost:3142/debian sid/main amd64 gcc-14-cross-base all 14.2.0-6cross1 [42.2 kB] Get:22 http://localhost:3142/debian sid/main amd64 libc6-ppc64el-cross all 2.40-3cross1 [1399 kB] Get:23 http://localhost:3142/debian sid/main amd64 libgcc-s1-ppc64el-cross all 14.2.0-6cross1 [35.5 kB] Get:24 http://localhost:3142/debian sid/main amd64 libgomp1-ppc64el-cross all 14.2.0-6cross1 [135 kB] Get:25 http://localhost:3142/debian sid/main amd64 libitm1-ppc64el-cross all 14.2.0-6cross1 [28.0 kB] Get:26 http://localhost:3142/debian sid/main amd64 libatomic1-ppc64el-cross all 14.2.0-6cross1 [9612 B] Get:27 http://localhost:3142/debian sid/main amd64 libasan8-ppc64el-cross all 14.2.0-6cross1 [2644 kB] Get:28 http://localhost:3142/debian sid/main amd64 liblsan0-ppc64el-cross all 14.2.0-6cross1 [1202 kB] Get:29 http://localhost:3142/debian sid/main amd64 libtsan2-ppc64el-cross all 14.2.0-6cross1 [2409 kB] Get:30 http://localhost:3142/debian sid/main amd64 libstdc++6-ppc64el-cross all 14.2.0-6cross1 [747 kB] Get:31 http://localhost:3142/debian sid/main amd64 libubsan1-ppc64el-cross all 14.2.0-6cross1 [1080 kB] Get:32 http://localhost:3142/debian sid/main amd64 libquadmath0-ppc64el-cross all 14.2.0-6cross1 [151 kB] Get:33 http://localhost:3142/debian sid/main amd64 libgcc-14-dev-ppc64el-cross all 14.2.0-6cross1 [1405 kB] Get:34 http://localhost:3142/debian sid/main amd64 gcc-14-powerpc64le-linux-gnu amd64 14.2.0-6cross1 [19.6 MB] Get:35 http://localhost:3142/debian sid/main amd64 gcc-powerpc64le-linux-gnu amd64 4:14.2.0-1 [1460 B] Get:36 http://localhost:3142/debian sid/main amd64 linux-libc-dev-ppc64el-cross all 6.11.2-1cross1 [2254 kB] Get:37 http://localhost:3142/debian sid/main amd64 libc6-dev-ppc64el-cross all 2.40-3cross1 [1856 kB] Get:38 http://localhost:3142/debian sid/main amd64 libstdc++-14-dev-ppc64el-cross all 14.2.0-6cross1 [2478 kB] Get:39 http://localhost:3142/debian sid/main amd64 g++-14-powerpc64le-linux-gnu amd64 14.2.0-6cross1 [11.2 MB] Get:40 http://localhost:3142/debian sid/main amd64 g++-powerpc64le-linux-gnu amd64 4:14.2.0-1 [1212 B] Get:41 http://localhost:3142/debian sid/main amd64 crossbuild-essential-ppc64el all 12.12 [3560 B] Get:42 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get:43 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:44 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:46 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:47 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:48 http://localhost:3142/debian sid/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get:49 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:50 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get:51 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get:52 http://localhost:3142/debian sid/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:53 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:54 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:55 http://localhost:3142/debian sid/main amd64 debhelper all 13.20 [915 kB] Get:56 http://localhost:3142/debian sid/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:57 http://localhost:3142/debian sid/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:58 http://localhost:3142/debian sid/main ppc64el gcc-14-base ppc64el 14.2.0-6 [46.8 kB] Get:59 http://localhost:3142/debian sid/main ppc64el libgcc-s1 ppc64el 14.2.0-6 [35.5 kB] Get:60 http://localhost:3142/debian sid/main ppc64el libc6 ppc64el 2.40-3 [2718 kB] Get:61 http://localhost:3142/debian sid/main ppc64el libasan8 ppc64el 14.2.0-6 [2652 kB] Get:62 http://localhost:3142/debian sid/main ppc64el libatomic1 ppc64el 14.2.0-6 [9912 B] Get:63 http://localhost:3142/debian sid/main ppc64el libcrypt1 ppc64el 1:4.4.36-5 [97.8 kB] Get:64 http://localhost:3142/debian sid/main ppc64el libcrypt-dev ppc64el 1:4.4.36-5 [132 kB] Get:65 http://localhost:3142/debian sid/main ppc64el libc6-dev ppc64el 2.40-3 [1863 kB] Get:66 http://localhost:3142/debian sid/main ppc64el libgomp1 ppc64el 14.2.0-6 [142 kB] Get:67 http://localhost:3142/debian sid/main ppc64el libitm1 ppc64el 14.2.0-6 [28.6 kB] Get:68 http://localhost:3142/debian sid/main ppc64el liblsan0 ppc64el 14.2.0-6 [1203 kB] Get:69 http://localhost:3142/debian sid/main ppc64el libtsan2 ppc64el 14.2.0-6 [2417 kB] Get:70 http://localhost:3142/debian sid/main ppc64el libstdc++6 ppc64el 14.2.0-6 [797 kB] Get:71 http://localhost:3142/debian sid/main ppc64el libubsan1 ppc64el 14.2.0-6 [1080 kB] Get:72 http://localhost:3142/debian sid/main ppc64el libquadmath0 ppc64el 14.2.0-6 [151 kB] Get:73 http://localhost:3142/debian sid/main ppc64el libgcc-14-dev ppc64el 14.2.0-6 [1411 kB] Get:74 http://localhost:3142/debian sid/main ppc64el libstdc++-14-dev ppc64el 14.2.0-6 [2500 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 99.0 MB in 1s (192 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 12969 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... 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Unpacking libgcc-14-dev:ppc64el (14.2.0-6) ... Selecting previously unselected package libstdc++-14-dev:ppc64el. Preparing to unpack .../72-libstdc++-14-dev_14.2.0-6_ppc64el.deb ... Unpacking libstdc++-14-dev:ppc64el (14.2.0-6) ... Selecting previously unselected package sbuild-build-depends-main-dummy:ppc64el. Preparing to unpack .../73-sbuild-build-depends-main-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5) ... Setting up bsdextrautils (2.40.2-9) ... Setting up gcc-14-powerpc64le-linux-gnu-base:amd64 (14.2.0-6cross1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up gcc-14-base:ppc64el (14.2.0-6) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libc6-ppc64el-cross (2.40-3cross1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up gcc-14-cross-base (14.2.0-6cross1) ... Setting up file (1:5.45-3) ... Setting up libgomp1-ppc64el-cross (14.2.0-6cross1) ... Setting up libfakeroot:amd64 (1.36-1) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up fakeroot (1.36-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up cpp-14-powerpc64le-linux-gnu (14.2.0-6cross1) ... Setting up autoconf (2.72-3) ... Setting up libitm1-ppc64el-cross (14.2.0-6cross1) ... Setting up libatomic1-ppc64el-cross (14.2.0-6cross1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up linux-libc-dev-ppc64el-cross (6.11.2-1cross1) ... Setting up libgcc-s1-ppc64el-cross (14.2.0-6cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.43.1-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up cpp-powerpc64le-linux-gnu (4:14.2.0-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libc6-dev-ppc64el-cross (2.40-3cross1) ... Setting up libtool (2.4.7-7) ... Setting up libquadmath0-ppc64el-cross (14.2.0-6cross1) ... Setting up libasan8-ppc64el-cross (14.2.0-6cross1) ... Setting up liblsan0-ppc64el-cross (14.2.0-6cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libtsan2-ppc64el-cross (14.2.0-6cross1) ... Setting up dh-autoreconf (20) ... Setting up libstdc++6-ppc64el-cross (14.2.0-6cross1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libubsan1-ppc64el-cross (14.2.0-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-ppc64el-cross (14.2.0-6cross1) ... Setting up libstdc++-14-dev-ppc64el-cross (14.2.0-6cross1) ... Setting up gcc-14-powerpc64le-linux-gnu (14.2.0-6cross1) ... Setting up g++-14-powerpc64le-linux-gnu (14.2.0-6cross1) ... Setting up debhelper (13.20) ... Setting up gcc-powerpc64le-linux-gnu (4:14.2.0-1) ... Setting up g++-powerpc64le-linux-gnu (4:14.2.0-1) ... Setting up crossbuild-essential-ppc64el (12.12) ... Setting up libgcc-s1:ppc64el (14.2.0-6) ... Setting up libc6:ppc64el (2.40-3) ... Setting up libasan8:ppc64el (14.2.0-6) ... Setting up libtsan2:ppc64el (14.2.0-6) ... Setting up libstdc++6:ppc64el (14.2.0-6) ... Setting up liblsan0:ppc64el (14.2.0-6) ... Setting up libitm1:ppc64el (14.2.0-6) ... Setting up libcrypt1:ppc64el (1:4.4.36-5) ... Setting up libgomp1:ppc64el (14.2.0-6) ... Setting up libquadmath0:ppc64el (14.2.0-6) ... Setting up libatomic1:ppc64el (14.2.0-6) ... Setting up libubsan1:ppc64el (14.2.0-6) ... Setting up libcrypt-dev:ppc64el (1:4.4.36-5) ... Setting up libc6-dev:ppc64el (2.40-3) ... Setting up libgcc-14-dev:ppc64el (14.2.0-6) ... Setting up libstdc++-14-dev:ppc64el (14.2.0-6) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) amd64 (x86_64) Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-6 gcc-14_14.2.0-6 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-6 libstdc++-14-dev-ppc64el-cross_14.2.0-6cross1 libstdc++6_14.2.0-6 libstdc++6-ppc64el-cross_14.2.0-6cross1 linux-libc-dev_6.11.2-1 Package versions: adduser_3.137 apt_2.9.8 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.4 bash_5.2.32-1+b1 binutils_2.43.1-5 binutils-common_2.43.1-5 binutils-powerpc64le-linux-gnu_2.43.1-5 binutils-x86-64-linux-gnu_2.43.1-5 bsdextrautils_2.40.2-9 bsdutils_1:2.40.2-9 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.4-3.1 cpp_4:14.2.0-1 cpp-14_14.2.0-6 cpp-14-powerpc64le-linux-gnu_14.2.0-6cross1 cpp-14-x86-64-linux-gnu_14.2.0-6 cpp-powerpc64le-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-ppc64el_12.12 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.20 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dwz_0.15-1+b1 fakeroot_1.36-1 file_1:5.45-3 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-6 g++-14-powerpc64le-linux-gnu_14.2.0-6cross1 g++-14-x86-64-linux-gnu_14.2.0-6 g++-powerpc64le-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-6 gcc-14-base_14.2.0-6 gcc-14-cross-base_14.2.0-6cross1 gcc-14-powerpc64le-linux-gnu_14.2.0-6cross1 gcc-14-powerpc64le-linux-gnu-base_14.2.0-6cross1 gcc-14-x86-64-linux-gnu_14.2.0-6 gcc-powerpc64le-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.22.5-2 gettext-base_0.22.5-2 gpgv_2.2.44-1 grep_3.11-4 groff-base_1.23.0-5 gzip_1.12-1.1 hostname_3.25 init-system-helpers_1.67 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libapt-pkg6.0t64_2.9.8 libarchive-zip-perl_1.68-1 libasan8_14.2.0-6 libasan8-ppc64el-cross_14.2.0-6cross1 libatomic1_14.2.0-6 libatomic1-ppc64el-cross_14.2.0-6cross1 libattr1_1:2.5.2-2 libaudit-common_1:4.0.1-1 libaudit1_1:4.0.1-1 libbinutils_2.43.1-5 libblkid1_2.40.2-9 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.40-3 libc-dev-bin_2.40-3 libc6_2.40-3 libc6-dev_2.40-3 libc6-dev-ppc64el-cross_2.40-3cross1 libc6-ppc64el-cross_2.40-3cross1 libcap-ng0_0.8.5-2 libcap2_1:2.66-5 libcc1-0_14.2.0-6 libcrypt-dev_1:4.4.36-5 libcrypt1_1:4.4.36-5 libctf-nobfd0_2.43.1-5 libctf0_2.43.1-5 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.272 libdebhelper-perl_13.20 libdpkg-perl_1.22.11 libelf1t64_0.191-2 libfakeroot_1.36-1 libffi8_3.4.6-1 libfile-stripnondeterminism-perl_1.14.0-1 libgcc-14-dev_14.2.0-6 libgcc-14-dev-ppc64el-cross_14.2.0-6cross1 libgcc-s1_14.2.0-6 libgcc-s1-ppc64el-cross_14.2.0-6cross1 libgcrypt20_1.11.0-6 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.6-2 libgomp1_14.2.0-6 libgomp1-ppc64el-cross_14.2.0-6cross1 libgpg-error0_1.50-4 libgprofng0_2.43.1-5 libhogweed6t64_3.10-1 libhwasan0_14.2.0-6 libicu72_72.1-5 libidn2-0_2.3.7-2 libisl23_0.27-1 libitm1_14.2.0-6 libitm1-ppc64el-cross_14.2.0-6cross1 libjansson4_2.14-2+b2 liblsan0_14.2.0-6 liblsan0-ppc64el-cross_14.2.0-6cross1 liblz4-1_1.9.4-3 liblzma5_5.6.2-2 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40.2-9 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libnettle8t64_3.10-1 libp11-kit0_0.25.5-2 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.40_5.40.0-6 libpipeline1_1.5.8-1 libquadmath0_14.2.0-6 libquadmath0-ppc64el-cross_14.2.0-6cross1 libseccomp2_2.5.5-1+b1 libselinux1_3.7-3 libsemanage-common_3.7-2 libsemanage2_3.7-2 libsepol2_3.7-1 libsframe1_2.43.1-5 libsmartcols1_2.40.2-9 libssl3t64_3.3.2-1 libstdc++-14-dev_14.2.0-6 libstdc++-14-dev-ppc64el-cross_14.2.0-6cross1 libstdc++6_14.2.0-6 libstdc++6-ppc64el-cross_14.2.0-6cross1 libsystemd0_256.7-1 libtasn1-6_4.19.0-3+b2 libtinfo6_6.5-2 libtool_2.4.7-7 libtsan2_14.2.0-6 libtsan2-ppc64el-cross_14.2.0-6cross1 libubsan1_14.2.0-6 libubsan1-ppc64el-cross_14.2.0-6cross1 libuchardet0_0.0.8-1+b1 libudev1_256.7-1 libunistring5_1.2-1 libuuid1_2.40.2-9 libxml2_2.12.7+dfsg+really2.9.14-0.1 libxxhash0_0.8.2-2+b1 libzstd1_1.5.6+dfsg-1 linux-libc-dev_6.11.2-1 linux-libc-dev-ppc64el-cross_6.11.2-1cross1 login_1:4.16.0-2+really2.40.2-9 login.defs_1:4.16.0-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.13.0-1 mawk_1.3.4.20240905-1 mount_2.40.2-9 ncurses-base_6.5-2 ncurses-bin_6.5-2 openssl-provider-legacy_3.3.2-1 passwd_1:4.16.0-4 patch_2.7.6-7 perl_5.40.0-6 perl-base_5.40.0-6 perl-modules-5.40_5.40.0-6 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.24 sysvinit-utils_3.10-2 tar_1.35+dfsg-3 tzdata_2024b-3 usr-is-merged_39 util-linux_2.40.2-9 xz-utils_5.6.2-2 zlib1g_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: sim4 Binary: sim4 Architecture: any Version: 0.0.20121010-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://globin.bx.psu.edu/html/docs/sim4.html Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/sim4 Vcs-Git: https://salsa.debian.org/med-team/sim4.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: sim4 deb science optional arch=any Checksums-Sha1: af09413d4f79f2f6f642c26f1084a9403c3a3257 61240 sim4_0.0.20121010.orig.tar.gz 5325071e56f291a76203f9289657132845a29dcd 315540 sim4_0.0.20121010-8.debian.tar.xz Checksums-Sha256: d2132f61e47f2de5e35d0b48a0f697ae79ece3e8b91177eae2dfe47bda97b4a5 61240 sim4_0.0.20121010.orig.tar.gz 76a0f331358cd01fb7d93107678dbeb066cf2e7e60419d946624909f1d50a94a 315540 sim4_0.0.20121010-8.debian.tar.xz Files: 8bca6eb05c5aaf689db0db12522bdf34 61240 sim4_0.0.20121010.orig.tar.gz f5ef5efa2b5354ec7d06144d5a4cb246 315540 sim4_0.0.20121010-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/KS6MRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHjsw//Z2CkFUGn/Bb7PswKylgSLYeaQie3R7xD iyOs31xwhEz61rYb5nBVKKzUR+dLAsTmITFxozCMo1NkrF1lNVExdI2mzKh5u6Bv Xrt5gwSm0f/Im1I5adfTiYKzJTpWNr1AiNyDFGC9S7uT1PHK9hBBOBc2fpKgllzW Y+PrmuwrfMUbYqOh2ftnxIwCu4MkgxSZkpMdrieylQE9X+qF3vABH+j6mkmh7z6W 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from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying compilation_order.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.GulMQnuUOZ/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-95100f5d-8bc3-467c-965b-32fd0bccfbfc SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package sim4 dpkg-buildpackage: info: source version 0.0.20121010-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f sim4 *.o make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=powerpc64le-linux-gnu-pkg-config CXX=powerpc64le-linux-gnu-g\+\+ CC=powerpc64le-linux-gnu-gcc make[1]: Entering directory '/<>' powerpc64le-linux-gnu-gcc -o sim4 -I. -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -Wall `LC_ALL=C ls *.c` -lm -Wl,-z,relro Xtend1.c:12:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 12 | static const char rcsid[] = | ^~~~~ align.c:13:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 13 | static const char rcsid[] = | ^~~~~ align.c: In function ‘align_path’: align.c:250:13: warning: ‘head2’ may be used uninitialized [-Wmaybe-uninitialized] 250 | if (head2) *tail = tail2; | ^~~~~ align.c:27:38: note: ‘head2’ declared here 27 | edit_script *head1, *tail1, *head2, *tail2; | ^~~~~ args.c:7:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 7 | static const char rcsid[] = | ^~~~~ discrim.c:10:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ dna.c:9:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ encoding.c:52:20: warning: ‘osx_linker_bug’ defined but not used [-Wunused-variable] 52 | static const char *osx_linker_bug = ""; | ^~~~~~~~~~~~~~ encoding.c:3:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 3 | static const char rcsid[] = | ^~~~~ misc.c:8:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ poly.c: In function ‘remove_polyA_back’: poly.c:108:29: warning: variable ‘prev’ set but not used [-Wunused-but-set-variable] 108 | Exon *t, *exons_tail, *prev; /* start from Lblock */ | ^~~~ poly.c: At top level: poly.c:10:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = "$Id: poly.c,v 1.5 2002/03/03 23:29:48 florea Exp $"; | ^~~~~ prnt.c:10:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ seq.c:8:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ seq_read.c:9:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ sim4.init.c: In function ‘cds_range’: sim4.init.c:672:6: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:672:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ sim4.init.c:673:6: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:673:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ sim4.init.c: At top level: sim4.init.c:61:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 61 | static const char rcsid[] = | ^~~~~ sim4b1.c: In function ‘find_ends’: sim4b1.c:1523:27: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~ sim4b1.c:1523:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~~~~ sim4b1.c: At top level: sim4b1.c:8:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ sim4b1.c: In function ‘print_pipmaker_exons’: sim4b1.c:1386:11: warning: ‘From’ may be used uninitialized [-Wmaybe-uninitialized] 1386 | printf("+ %d %d\n", From, To); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sim4b1.c:1307:8: note: ‘From’ was declared here 1307 | int From, To, cov, ori; | ^~~~ sim4b1.c:1386:11: warning: ‘To’ may be used uninitialized [-Wmaybe-uninitialized] 1386 | printf("+ %d %d\n", From, To); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sim4b1.c:1307:14: note: ‘To’ was declared here 1307 | int From, To, cov, ori; | ^~ splice.c: In function ‘splice’: splice.c:45:67: warning: variable ‘keep_Gi’ set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ splice.c:45:58: warning: variable ‘keep_Ci’ set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ splice.c: At top level: splice.c:8:19: warning: ‘rcsid’ defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_installdirs -a dh_auto_install --destdir=debian/sim4/ -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'sim4' in '../sim4_0.0.20121010-8_ppc64el.deb'. dpkg-deb: building package 'sim4-dbgsym' in '../sim4-dbgsym_0.0.20121010-8_ppc64el.deb'. dpkg-genbuildinfo --build=any -O../sim4_0.0.20121010-8_ppc64el.buildinfo dpkg-genchanges --build=any -O../sim4_0.0.20121010-8_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-10-15T17:09:33Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ sim4_0.0.20121010-8_ppc64el.changes: ------------------------------------ Format: 1.8 Date: Fri, 04 Dec 2020 15:29:21 +0100 Source: sim4 Binary: sim4 sim4-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 0.0.20121010-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: sim4 - tool for aligning cDNA and genomic DNA Closes: 962117 Changes: sim4 (0.0.20121010-8) unstable; urgency=medium . * Nelson A. de Oliveira has retired so remove him from Uploaders (thanks Nelson for your work on this package) Closes: #962117 Checksums-Sha1: b079efaa0d5644245414f510dd16b0a7e408248a 113372 sim4-dbgsym_0.0.20121010-8_ppc64el.deb ece9282400405ee88c3180ad4ce380b680e4a332 4862 sim4_0.0.20121010-8_ppc64el.buildinfo 4344e473467fe0b52d5d46d71188fe54224a47a6 364148 sim4_0.0.20121010-8_ppc64el.deb Checksums-Sha256: 9297dfa2dafdaf6f518735714f6091203155a3d36f732754f4a463c3d2d75101 113372 sim4-dbgsym_0.0.20121010-8_ppc64el.deb 8fc5dcae68c784cded36f3a4e5bcf1664354180df3b55055695a7d5fb6894aed 4862 sim4_0.0.20121010-8_ppc64el.buildinfo a7dfdaa6a7d18c82ca5eb4a8b33092dde91735c69b5235d5c2de5f93a949c424 364148 sim4_0.0.20121010-8_ppc64el.deb Files: 7e231e68937aa4d654321331166afaf2 113372 debug optional sim4-dbgsym_0.0.20121010-8_ppc64el.deb 6d3cdf7ec42b8bf5351e01e59434e389 4862 science optional sim4_0.0.20121010-8_ppc64el.buildinfo c13d3a515c2b640f8a43e715fada2688 364148 science optional sim4_0.0.20121010-8_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: sim4 Binary: sim4 sim4-dbgsym Architecture: ppc64el Version: 0.0.20121010-8 Checksums-Md5: 7e231e68937aa4d654321331166afaf2 113372 sim4-dbgsym_0.0.20121010-8_ppc64el.deb c13d3a515c2b640f8a43e715fada2688 364148 sim4_0.0.20121010-8_ppc64el.deb Checksums-Sha1: b079efaa0d5644245414f510dd16b0a7e408248a 113372 sim4-dbgsym_0.0.20121010-8_ppc64el.deb 4344e473467fe0b52d5d46d71188fe54224a47a6 364148 sim4_0.0.20121010-8_ppc64el.deb Checksums-Sha256: 9297dfa2dafdaf6f518735714f6091203155a3d36f732754f4a463c3d2d75101 113372 sim4-dbgsym_0.0.20121010-8_ppc64el.deb a7dfdaa6a7d18c82ca5eb4a8b33092dde91735c69b5235d5c2de5f93a949c424 364148 sim4_0.0.20121010-8_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Tue, 15 Oct 2024 17:09:33 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.72-3), automake (= 1:1.16.5-1.3), autopoint (= 0.22.5-2), autotools-dev (= 20220109.1), base-files (= 13.5), base-passwd (= 3.6.4), bash (= 5.2.32-1+b1), binutils (= 2.43.1-5), binutils-common (= 2.43.1-5), binutils-x86-64-linux-gnu (= 2.43.1-5), bsdextrautils (= 2.40.2-9), bsdutils (= 1:2.40.2-9), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.4-3.1), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-6), cpp-14-x86-64-linux-gnu (= 14.2.0-6), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-9), debconf (= 1.5.87), debhelper (= 13.20), debianutils (= 5.20), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.11), dpkg-dev (= 1.22.11), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-6), g++-14-x86-64-linux-gnu (= 14.2.0-6), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-6), gcc-14-base (= 14.2.0-6), gcc-14-x86-64-linux-gnu (= 14.2.0-6), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.22.5-2), gettext-base (= 0.22.5-2), grep (= 3.11-4), groff-base (= 1.23.0-5), gzip (= 1.12-1.1), hostname (= 3.25), init-system-helpers (= 1.67), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-6), libatomic1 (= 14.2.0-6), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.1-1), libaudit1 (= 1:4.0.1-1), libbinutils (= 2.43.1-5), libblkid1 (= 2.40.2-9), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.40-3), libc-dev-bin (= 2.40-3), libc6 (= 2.40-3), libc6-dev (= 2.40-3), libcap-ng0 (= 0.8.5-2), libcap2 (= 1:2.66-5), libcc1-0 (= 14.2.0-6), libcrypt-dev (= 1:4.4.36-5), libcrypt1 (= 1:4.4.36-5), libctf-nobfd0 (= 2.43.1-5), libctf0 (= 2.43.1-5), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.20), libdpkg-perl (= 1.22.11), libelf1t64 (= 0.191-2), libfile-stripnondeterminism-perl (= 1.14.0-1), libgcc-14-dev (= 14.2.0-6), libgcc-s1 (= 14.2.0-6), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgomp1 (= 14.2.0-6), libgprofng0 (= 2.43.1-5), libhwasan0 (= 14.2.0-6), libicu72 (= 72.1-5), libisl23 (= 0.27-1), libitm1 (= 14.2.0-6), libjansson4 (= 2.14-2+b2), liblsan0 (= 14.2.0-6), liblzma5 (= 5.6.2-2), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40.2-9), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpcre2-8-0 (= 10.42-4+b1), libperl5.40 (= 5.40.0-6), libpipeline1 (= 1.5.8-1), libquadmath0 (= 14.2.0-6), libseccomp2 (= 2.5.5-1+b1), libselinux1 (= 3.7-3), libsframe1 (= 2.43.1-5), libsmartcols1 (= 2.40.2-9), libssl3t64 (= 3.3.2-1), libstdc++-14-dev (= 14.2.0-6), libstdc++6 (= 14.2.0-6), libsystemd0 (= 256.7-1), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtsan2 (= 14.2.0-6), libubsan1 (= 14.2.0-6), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256.7-1), libunistring5 (= 1.2-1), libuuid1 (= 2.40.2-9), libxml2 (= 2.12.7+dfsg+really2.9.14-0.1), libzstd1 (= 1.5.6+dfsg-1), linux-libc-dev (= 6.11.2-1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.13.0-1), mawk (= 1.3.4.20240905-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), openssl-provider-legacy (= 3.3.2-1), patch (= 2.7.6-7), perl (= 5.40.0-6), perl-base (= 5.40.0-6), perl-modules-5.40 (= 5.40.0-6), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.10-2), tar (= 1.35+dfsg-3), usr-is-merged (= 39), util-linux (= 2.40.2-9), xz-utils (= 5.6.2-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1607092161" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ sim4-dbgsym_0.0.20121010-8_ppc64el.deb -------------------------------------- new Debian package, version 2.0. size 113372 bytes: control archive=540 bytes. 374 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: sim4-dbgsym Source: sim4 Version: 0.0.20121010-8 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 132 Depends: sim4 (= 0.0.20121010-8) Section: debug Priority: optional Description: debug symbols for sim4 Build-Ids: 1fb06b837ddf0a30bebadcfd34ae3f4ee0955bb0 drwxr-xr-x root/root 0 2020-12-04 14:29 ./ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/lib/debug/.build-id/1f/ -rw-r--r-- root/root 124040 2020-12-04 14:29 ./usr/lib/debug/.build-id/1f/b06b837ddf0a30bebadcfd34ae3f4ee0955bb0.debug drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-12-04 14:29 ./usr/share/doc/sim4-dbgsym -> sim4 sim4_0.0.20121010-8_ppc64el.deb ------------------------------- new Debian package, version 2.0. size 364148 bytes: control archive=1224 bytes. 1252 bytes, 24 lines control 471 bytes, 7 lines md5sums Package: sim4 Version: 0.0.20121010-8 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 1406 Depends: libc6 (>= 2.34) Section: science Priority: optional Homepage: https://globin.bx.psu.edu/html/docs/sim4.html Description: tool for aligning cDNA and genomic DNA sim4 is a similarity-based tool for aligning an expressed DNA sequence (EST, cDNA, mRNA) with a genomic sequence for the gene. It also detects end matches when the two input sequences overlap at one end (i.e., the start of one sequence overlaps the end of the other). . sim4 employs a blast-based technique to first determine the basic matching blocks representing the "exon cores". In this first stage, it detects all possible exact matches of W-mers (i.e., DNA words of size W) between the two sequences and extends them to maximal scoring gap-free segments. In the second stage, the exon cores are extended into the adjacent as-yet-unmatched fragments using greedy alignment algorithms, and heuristics are used to favor configurations that conform to the splice-site recognition signals (GT-AG, CT-AC). If necessary, the process is repeated with less stringent parameters on the unmatched fragments. drwxr-xr-x root/root 0 2020-12-04 14:29 ./ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/bin/ -rwxr-xr-x root/root 134744 2020-12-04 14:29 ./usr/bin/sim4 drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/doc/sim4/ -rw-r--r-- root/root 589 2020-12-04 14:29 ./usr/share/doc/sim4/changelog.Debian.gz -rw-r--r-- root/root 94 2012-10-10 14:36 ./usr/share/doc/sim4/changelog.gz -rw-r--r-- root/root 1333 2020-12-04 14:29 ./usr/share/doc/sim4/copyright drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/doc/sim4/examples/ -rw-r--r-- root/root 16864 2020-12-04 14:29 ./usr/share/doc/sim4/examples/sample.cdna.fasta -rw-r--r-- root/root 1267787 2020-12-04 14:29 ./usr/share/doc/sim4/examples/sample.gen.fasta drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/man/ drwxr-xr-x root/root 0 2020-12-04 14:29 ./usr/share/man/man1/ -rw-r--r-- root/root 3296 2020-12-04 14:29 ./usr/share/man/man1/sim4.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1302 B] Get:5 copy:/<>/apt_archive ./ Packages [1385 B] Fetched 3302 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The solver encountered an error of type: ERR_UNSOLVABLE The following information might help you to understand what is wrong: Unsatisfied dependencies: libtext-xslate-perl : Depends: perlapi-5.38.2 but it is not installable libberkeleydb-perl : Depends: perlapi-5.38.2 but it is not installable Execute external solver... Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation: The following packages have unmet dependencies: sbuild-build-depends-lintian-dummy:ppc64el : Depends: lintian:amd64 E: External solver failed with: Unsatisfied dependencies: apt-get failed. E: Package installation failed Not removing build depends: cloned chroot in use +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 4168 Build-Time: 7 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 10 Job: sim4_0.0.20121010-8 Lintian: error Machine Architecture: amd64 Package: sim4 Package-Time: 28 Source-Version: 0.0.20121010-8 Space: 4168 Status: successful Version: 0.0.20121010-8 -------------------------------------------------------------------------------- Finished at 2024-10-15T17:09:33Z Build needed 00:00:28, 4168k disk space