sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | snap-aligner 2.0.3+dfsg-1 (ppc64el) Sat, 11 Nov 2023 15:18:56 +0000 | +==============================================================================+ Package: snap-aligner Version: 2.0.3+dfsg-1 Source Version: 2.0.3+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-8ddabfcf-4f0b-4f8a-a022-27135badfd33' with '<>' I: NOTICE: Log filtering will replace 'build/snap-aligner-Z0Ag2a/resolver-5uBKB4' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [198 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-11-11-1406.05-F-2023-11-11-0203.53.pdiff [24.8 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-11-11-1406.05-F-2023-11-11-0203.53.pdiff [32.2 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-11-11-1406.05-F-2023-11-11-0203.53.pdiff [24.8 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-11-11-1406.05-F-2023-11-11-0203.53.pdiff [32.2 kB] Get:6 http://localhost:3142/debian sid/main ppc64el Packages [9405 kB] Fetched 9787 kB in 3s (3766 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'snap-aligner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap-aligner.git Please use: git clone https://salsa.debian.org/med-team/snap-aligner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2033 kB of source archives. Get:1 http://localhost:3142/debian sid/main snap-aligner 2.0.3+dfsg-1 (dsc) [2269 B] Get:2 http://localhost:3142/debian sid/main snap-aligner 2.0.3+dfsg-1 (tar) [2023 kB] Get:3 http://localhost:3142/debian sid/main snap-aligner 2.0.3+dfsg-1 (diff) [7732 B] Fetched 2033 kB in 1s (1480 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/snap-aligner-Z0Ag2a/snap-aligner-2.0.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/snap-aligner-Z0Ag2a' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [756 B] Get:5 copy:/<>/apt_archive ./ Packages [801 B] Fetched 2166 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-13-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-13-base:ppc64el gcc-13-cross-base gcc-13-powerpc64le-linux-gnu gcc-13-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-13-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libicu72 libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libnsl-dev:ppc64el libnsl2:ppc64el libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libsimde-dev libssl3:ppc64el libstdc++-11-dev:ppc64el libstdc++-13-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el krb5-doc:ppc64el krb5-user:ppc64el libstdc++-11-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:ppc64el libarchive-cpio-perl krb5-locales:ppc64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-13-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-13-base:ppc64el gcc-13-cross-base gcc-13-powerpc64le-linux-gnu gcc-13-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-13-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libicu72 libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libnsl-dev:ppc64el libnsl2:ppc64el libpipeline1 libquadmath0:ppc64el libquadmath0-ppc64el-cross libsimde-dev libssl3:ppc64el libstdc++-11-dev:ppc64el libstdc++-13-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 106 newly installed, 0 to remove and 0 not upgraded. Need to get 99.3 MB of archives. After this operation, 416 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-6 [15.3 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.20 [19.3 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-2 [314 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.45-2 [105 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-2 [42.8 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-13+b1 [161 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-3 [1180 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.2-5 [89.1 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.0-1 [1402 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-13 [496 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-powerpc64le-linux-gnu amd64 2.41-6 [2773 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-13-powerpc64le-linux-gnu-base amd64 13.2.0-6cross1 [40.8 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-13-powerpc64le-linux-gnu amd64 13.2.0-6cross1 [9188 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-powerpc64le-linux-gnu amd64 4:13.2.0-1 [4124 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-6cross1 [36.3 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-ppc64el-cross all 2.37-12cross1 [1352 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-ppc64el-cross all 13.2.0-6cross1 [35.0 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-ppc64el-cross all 13.2.0-6cross1 [134 kB] Get:28 http://localhost:3142/debian sid/main amd64 libitm1-ppc64el-cross all 13.2.0-6cross1 [28.3 kB] Get:29 http://localhost:3142/debian sid/main amd64 libatomic1-ppc64el-cross all 13.2.0-6cross1 [9484 B] Get:30 http://localhost:3142/debian sid/main amd64 libasan8-ppc64el-cross all 13.2.0-6cross1 [2516 kB] Get:31 http://localhost:3142/debian sid/main amd64 liblsan0-ppc64el-cross all 13.2.0-6cross1 [1113 kB] Get:32 http://localhost:3142/debian sid/main amd64 libtsan2-ppc64el-cross all 13.2.0-6cross1 [2352 kB] Get:33 http://localhost:3142/debian sid/main amd64 libstdc++6-ppc64el-cross all 13.2.0-6cross1 [729 kB] Get:34 http://localhost:3142/debian sid/main amd64 libubsan1-ppc64el-cross all 13.2.0-6cross1 [1022 kB] Get:35 http://localhost:3142/debian sid/main amd64 libquadmath0-ppc64el-cross all 13.2.0-6cross1 [149 kB] Get:36 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-ppc64el-cross all 13.2.0-6cross1 [1378 kB] Get:37 http://localhost:3142/debian sid/main amd64 gcc-13-powerpc64le-linux-gnu amd64 13.2.0-6cross1 [18.1 MB] Get:38 http://localhost:3142/debian sid/main amd64 gcc-powerpc64le-linux-gnu amd64 4:13.2.0-1 [1480 B] Get:39 http://localhost:3142/debian sid/main amd64 linux-libc-dev-ppc64el-cross all 6.5.8-1cross1 [2004 kB] Get:40 http://localhost:3142/debian sid/main amd64 libc6-dev-ppc64el-cross all 2.37-12cross1 [1811 kB] Get:41 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-ppc64el-cross all 13.2.0-6cross1 [2290 kB] Get:42 http://localhost:3142/debian sid/main amd64 g++-13-powerpc64le-linux-gnu amd64 13.2.0-6cross1 [10.2 MB] Get:43 http://localhost:3142/debian sid/main amd64 g++-powerpc64le-linux-gnu amd64 4:13.2.0-1 [1184 B] Get:44 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:45 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:46 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-4 [9396 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3 [686 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:49 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:50 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:51 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:52 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:53 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:54 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:56 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:58 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 crossbuild-essential-ppc64el all 12.10 [3492 B] Get:60 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.7 [82.1 kB] Get:61 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:63 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:64 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:65 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:66 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:67 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.189-4 [174 kB] Get:68 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:69 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-13+b1 [1301 kB] Get:70 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:71 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:72 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.7 [956 kB] Get:73 http://localhost:3142/debian sid/main ppc64el gcc-11-base ppc64el 11.4.0-5 [40.1 kB] Get:74 http://localhost:3142/debian sid/main ppc64el gcc-13-base ppc64el 13.2.0-6 [40.5 kB] Get:75 http://localhost:3142/debian sid/main amd64 help2man amd64 1.49.3 [198 kB] Get:76 http://localhost:3142/debian sid/main ppc64el libgcc-s1 ppc64el 13.2.0-6 [35.0 kB] Get:77 http://localhost:3142/debian sid/main ppc64el libc6 ppc64el 2.37-12 [2683 kB] Get:78 http://localhost:3142/debian sid/main ppc64el libasan6 ppc64el 11.4.0-5 [2037 kB] Get:79 http://localhost:3142/debian sid/main ppc64el libatomic1 ppc64el 13.2.0-6 [9772 B] Get:80 http://localhost:3142/debian sid/main ppc64el linux-libc-dev ppc64el 6.5.10-1 [2006 kB] Get:81 http://localhost:3142/debian sid/main ppc64el libcrypt1 ppc64el 1:4.4.36-2 [98.0 kB] Get:82 http://localhost:3142/debian sid/main ppc64el libcrypt-dev ppc64el 1:4.4.36-2 [132 kB] Get:83 http://localhost:3142/debian sid/main ppc64el libkrb5support0 ppc64el 1.20.1-5 [36.2 kB] Get:84 http://localhost:3142/debian sid/main ppc64el libcom-err2 ppc64el 1.47.0-2+b1 [20.5 kB] Get:85 http://localhost:3142/debian sid/main ppc64el libk5crypto3 ppc64el 1.20.1-5 [89.8 kB] Get:86 http://localhost:3142/debian sid/main ppc64el libkeyutils1 ppc64el 1.6.3-2 [10.0 kB] Get:87 http://localhost:3142/debian sid/main ppc64el libssl3 ppc64el 3.0.12-2 [2030 kB] Get:88 http://localhost:3142/debian sid/main ppc64el libkrb5-3 ppc64el 1.20.1-5 [364 kB] Get:89 http://localhost:3142/debian sid/main ppc64el libgssapi-krb5-2 ppc64el 1.20.1-5 [149 kB] Get:90 http://localhost:3142/debian sid/main ppc64el libtirpc3 ppc64el 1.3.3+ds-1 [96.7 kB] Get:91 http://localhost:3142/debian sid/main ppc64el libnsl2 ppc64el 1.3.0-3 [44.3 kB] Get:92 http://localhost:3142/debian sid/main ppc64el libtirpc-dev ppc64el 1.3.3+ds-1 [209 kB] Get:93 http://localhost:3142/debian sid/main ppc64el libnsl-dev ppc64el 1.3.0-3 [72.7 kB] Get:94 http://localhost:3142/debian sid/main ppc64el libc6-dev ppc64el 2.37-12 [1815 kB] Get:95 http://localhost:3142/debian sid/main ppc64el libgomp1 ppc64el 13.2.0-6 [137 kB] Get:96 http://localhost:3142/debian sid/main ppc64el libitm1 ppc64el 13.2.0-6 [28.8 kB] Get:97 http://localhost:3142/debian sid/main ppc64el liblsan0 ppc64el 13.2.0-6 [1114 kB] Get:98 http://localhost:3142/debian sid/main ppc64el libtsan0 ppc64el 11.4.0-5 [2023 kB] Get:99 http://localhost:3142/debian sid/main ppc64el libstdc++6 ppc64el 13.2.0-6 [777 kB] Get:100 http://localhost:3142/debian sid/main ppc64el libubsan1 ppc64el 13.2.0-6 [1023 kB] Get:101 http://localhost:3142/debian sid/main ppc64el libquadmath0 ppc64el 13.2.0-6 [150 kB] Get:102 http://localhost:3142/debian sid/main ppc64el libgcc-11-dev ppc64el 11.4.0-5 [1269 kB] Get:103 http://localhost:3142/debian sid/main amd64 libsimde-dev all 0.7.6-1 [384 kB] Get:104 http://localhost:3142/debian sid/main ppc64el libstdc++-11-dev ppc64el 11.4.0-5 [2071 kB] Get:105 http://localhost:3142/debian sid/main ppc64el zlib1g ppc64el 1:1.2.13.dfsg-3 [85.6 kB] Get:106 http://localhost:3142/debian sid/main ppc64el zlib1g-dev ppc64el 1:1.2.13.dfsg-3 [916 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 99.3 MB in 1s (194 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 14615 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-6_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-2_amd64.deb ... Unpacking libmagic-mgc (1:5.45-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.45-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.45-2) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-2_amd64.deb ... Unpacking file (1:5.45-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-13+b1_amd64.deb ... Unpacking gettext-base (0.21-13+b1) ... 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Setting up libconfig-inifiles-perl (3.000003-2) ... Setting up libpipeline1:amd64 (1.5.7-1) ... Setting up libsimde-dev (0.7.6-1) ... Setting up gcc-11-base:ppc64el (11.4.0-5) ... Setting up libfile-which-perl (1.27-2) ... Setting up libicu72:amd64 (72.1-4) ... Setting up bsdextrautils (2.39.2-5) ... Setting up libmagic-mgc (1:5.45-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libc6-ppc64el-cross (2.37-12cross1) ... Setting up libdebhelper-perl (13.11.7) ... Setting up libmagic1:amd64 (1:5.45-2) ... Setting up linux-libc-dev:ppc64el (6.5.10-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-13+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2) ... Setting up gcc-13-powerpc64le-linux-gnu-base:amd64 (13.2.0-6cross1) ... Setting up libyaml-perl (1.30-2) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up gcc-13-base:ppc64el (13.2.0-6) ... Setting up gcc-13-cross-base (13.2.0-6cross1) ... Setting up autopoint (0.21-13) ... Setting up autoconf (2.71-3) ... Setting up libitm1-ppc64el-cross (13.2.0-6cross1) ... Setting up libatomic1-ppc64el-cross (13.2.0-6cross1) ... Setting up sensible-utils (0.0.20) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up linux-libc-dev-ppc64el-cross (6.5.8-1cross1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libgcc-s1-ppc64el-cross (13.2.0-6cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.41-6) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-6cross1) ... Setting up libelf1:amd64 (0.189-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3) ... Setting up liblocale-gettext-perl (1.07-6) ... Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-13+b1) ... Setting up libc6-dev-ppc64el-cross (2.37-12cross1) ... Setting up libtool (2.4.7-7) ... Setting up libquadmath0-ppc64el-cross (13.2.0-6cross1) ... Setting up libasan8-ppc64el-cross (13.2.0-6cross1) ... Setting up libgomp1-ppc64el-cross (13.2.0-6cross1) ... Setting up liblsan0-ppc64el-cross (13.2.0-6cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libtsan2-ppc64el-cross (13.2.0-6cross1) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up ucf (3.0043+nmu1) ... Setting up libstdc++6-ppc64el-cross (13.2.0-6cross1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up libubsan1-ppc64el-cross (13.2.0-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-ppc64el-cross (13.2.0-6cross1) ... Setting up libstdc++-13-dev-ppc64el-cross (13.2.0-6cross1) ... Setting up debhelper (13.11.7) ... Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-6cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-13-powerpc64le-linux-gnu (13.2.0-6cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up g++-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-ppc64el (12.10) ... Setting up libgcc-s1:ppc64el (13.2.0-6) ... Setting up libc6:ppc64el (2.37-12) ... Setting up libstdc++6:ppc64el (13.2.0-6) ... Setting up liblsan0:ppc64el (13.2.0-6) ... Setting up libitm1:ppc64el (13.2.0-6) ... Setting up libtsan0:ppc64el (11.4.0-5) ... Setting up libkeyutils1:ppc64el (1.6.3-2) ... Setting up libssl3:ppc64el (3.0.12-2) ... Setting up zlib1g:ppc64el (1:1.2.13.dfsg-3) ... Setting up libcrypt1:ppc64el (1:4.4.36-2) ... Setting up libcom-err2:ppc64el (1.47.0-2+b1) ... Setting up libgomp1:ppc64el (13.2.0-6) ... Setting up libasan6:ppc64el (11.4.0-5) ... Setting up libkrb5support0:ppc64el (1.20.1-5) ... Setting up libquadmath0:ppc64el (13.2.0-6) ... Setting up libatomic1:ppc64el (13.2.0-6) ... Setting up libk5crypto3:ppc64el (1.20.1-5) ... Setting up libubsan1:ppc64el (13.2.0-6) ... Setting up libgcc-11-dev:ppc64el (11.4.0-5) ... Setting up libcrypt-dev:ppc64el (1:4.4.36-2) ... Setting up libkrb5-3:ppc64el (1.20.1-5) ... Setting up libgssapi-krb5-2:ppc64el (1.20.1-5) ... Setting up libtirpc3:ppc64el (1.3.3+ds-1) ... Setting up libtirpc-dev:ppc64el (1.3.3+ds-1) ... Setting up libnsl2:ppc64el (1.3.0-3) ... Setting up libnsl-dev:ppc64el (1.3.0-3) ... Setting up libc6-dev:ppc64el (2.37-12) ... Setting up libstdc++-11-dev:ppc64el (11.4.0-5) ... Setting up zlib1g-dev:ppc64el (1:1.2.13.dfsg-3) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.37-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in amd64 arm64 mips64el ppc64el s390x alpha kfreebsd-amd64 ppc64 riscv64 sparc64) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.55-1 (2023-09-29) amd64 (x86_64) Toolchain package versions: binutils_2.41-6 dpkg-dev_1.22.1 g++-11_11.4.0-5 g++-13_13.2.0-6 gcc-11_11.4.0-5 gcc-13_13.2.0-6 libc6-dev_2.37-12 libstdc++-11-dev_11.4.0-5 libstdc++-13-dev_13.2.0-6 libstdc++-13-dev-ppc64el-cross_13.2.0-6cross1 libstdc++6_13.2.0-6 libstdc++6-ppc64el-cross_13.2.0-6cross1 linux-libc-dev_6.5.10-1 Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.2 bash_5.2.15-2+b6 binutils_2.41-6 binutils-common_2.41-6 binutils-powerpc64le-linux-gnu_2.41-6 binutils-x86-64-linux-gnu_2.41-6 bsdextrautils_2.39.2-5 bsdutils_1:2.39.2-5 build-essential_12.10 bzip2_1.0.8-5+b1 coreutils_9.4-2+b1 cpp_4:13.2.0-1 cpp-11_11.4.0-5 cpp-13_13.2.0-6 cpp-13-powerpc64le-linux-gnu_13.2.0-6cross1 cpp-powerpc64le-linux-gnu_4:13.2.0-1 cross-config_2.6.20 crossbuild-essential-ppc64el_12.10 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.7 debian-archive-keyring_2023.4 debianutils_5.14 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.1 dpkg-cross_2.6.20 dpkg-dev_1.22.1 dwz_0.15-1 e2fsprogs_1.47.0-2+b1 fakeroot_1.32.2-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-1 g++-11_11.4.0-5 g++-13_13.2.0-6 g++-13-powerpc64le-linux-gnu_13.2.0-6cross1 g++-powerpc64le-linux-gnu_4:13.2.0-1 gcc_4:13.2.0-1 gcc-11_11.4.0-5 gcc-11-base_11.4.0-5 gcc-12-base_12.3.0-11 gcc-13_13.2.0-6 gcc-13-base_13.2.0-6 gcc-13-cross-base_13.2.0-6cross1 gcc-13-powerpc64le-linux-gnu_13.2.0-6cross1 gcc-13-powerpc64le-linux-gnu-base_13.2.0-6cross1 gcc-9-base_9.5.0-4 gcc-powerpc64le-linux-gnu_4:13.2.0-1 gettext_0.21-13+b1 gettext-base_0.21-13+b1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-3 gzip_1.12-1 help2man_1.49.3 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libasan6_11.4.0-5 libasan8_13.2.0-6 libasan8-ppc64el-cross_13.2.0-6cross1 libatomic1_13.2.0-6 libatomic1-ppc64el-cross_13.2.0-6cross1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbinutils_2.41-6 libblkid1_2.39.2-5 libbz2-1.0_1.0.8-5+b1 libc-bin_2.37-12 libc-dev-bin_2.37-12 libc6_2.37-12 libc6-dev_2.37-12 libc6-dev-ppc64el-cross_2.37-12cross1 libc6-ppc64el-cross_2.37-12cross1 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-4 libcc1-0_13.2.0-6 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.41-6 libctf0_2.41-6 libdb5.3_5.3.28+dfsg2-4 libdebconfclient0_0.271 libdebhelper-perl_13.11.7 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.1 libelf1_0.189-4 libext2fs2_1.47.0-2+b1 libfakeroot_1.32.2-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.4.0-5 libgcc-13-dev_13.2.0-6 libgcc-13-dev-ppc64el-cross_13.2.0-6cross1 libgcc-s1_13.2.0-6 libgcc-s1-ppc64el-cross_13.2.0-6cross1 libgcrypt20_1.10.2-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.1-4+b1 libgomp1_13.2.0-6 libgomp1-ppc64el-cross_13.2.0-6cross1 libgpg-error0_1.47-2 libgprofng0_2.41-6 libgssapi-krb5-2_1.20.1-5 libhogweed6_3.9.1-2 libhwasan0_13.2.0-6 libicu72_72.1-4 libidn2-0_2.3.4-1+b1 libio-string-perl_1.08-4 libisl23_0.26-3 libitm1_13.2.0-6 libitm1-ppc64el-cross_13.2.0-6cross1 libjansson4_2.14-2 libk5crypto3_1.20.1-5 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-5 libkrb5support0_1.20.1-5 liblocale-gettext-perl_1.07-6 liblsan0_13.2.0-6 liblsan0-ppc64el-cross_13.2.0-6cross1 liblz4-1_1.9.4-1 liblzma5_5.4.4-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.2-5 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libnettle8_3.9.1-2 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.0-5 libpam-modules_1.5.2-9.1 libpam-modules-bin_1.5.2-9.1 libpam-runtime_1.5.2-9.1 libpam0g_1.5.2-9.1 libpcre2-8-0_10.42-4 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-9 libpipeline1_1.5.7-1 libquadmath0_13.2.0-6 libquadmath0-ppc64el-cross_13.2.0-6cross1 libseccomp2_2.5.4-2 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-1 libsframe1_2.41-6 libsimde-dev_0.7.6-1 libsmartcols1_2.39.2-5 libss2_1.47.0-2+b1 libssl3_3.0.12-2 libstdc++-11-dev_11.4.0-5 libstdc++-13-dev_13.2.0-6 libstdc++-13-dev-ppc64el-cross_13.2.0-6cross1 libstdc++6_13.2.0-6 libstdc++6-ppc64el-cross_13.2.0-6cross1 libsub-override-perl_0.09-4 libsystemd0_254.5-1 libtasn1-6_4.19.0-3 libtext-glob-perl_0.11-3 libtinfo6_6.4+20231016-1 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libtsan0_11.4.0-5 libtsan2_13.2.0-6 libtsan2-ppc64el-cross_13.2.0-6cross1 libubsan1_13.2.0-6 libubsan1-ppc64el-cross_13.2.0-6cross1 libuchardet0_0.0.7-1 libudev1_254.5-1 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.2-5 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3 libxxhash0_0.8.2-2 libyaml-perl_1.30-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.10-1 linux-libc-dev-ppc64el-cross_6.5.8-1cross1 login_1:4.13+dfsg1-3 logsave_1.47.0-2+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-1 mawk_1.3.4.20230808-1 mount_2.39.2-5 ncurses-base_6.4+20231016-1 ncurses-bin_6.4+20231016-1 passwd_1:4.13+dfsg1-3 patch_2.7.6-7 perl_5.36.0-9 perl-base_5.36.0-9 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-9 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sysvinit-utils_3.08-3 tar_1.34+dfsg-1.2 tzdata_2023c-10 ucf_3.0043+nmu1 usrmerge_38 util-linux_2.39.2-5 util-linux-extra_2.39.2-5 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: snap-aligner Binary: snap-aligner Architecture: amd64 arm64 mips64el ppc64el s390x alpha kfreebsd-amd64 ppc64 riscv64 sparc64 Version: 2.0.3+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Pranav Ballaney Homepage: https://snap.cs.berkeley.edu/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/snap-aligner Vcs-Git: https://salsa.debian.org/med-team/snap-aligner.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev Package-List: snap-aligner deb science optional arch=amd64,arm64,mips64el,ppc64el,s390x,alpha,kfreebsd-amd64,ppc64,riscv64,sparc64 Checksums-Sha1: 9e63e397151ab04ea3a2c42f486fb1d25afb2c41 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz c29ce911302905d8df834b75c125a7449779db0d 7732 snap-aligner_2.0.3+dfsg-1.debian.tar.xz Checksums-Sha256: f340590a4cff3e1f27bfa081123e4dacf61b1514855ae3dc9393b179756faff0 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz 964a373f9968faa0807b12b0a9de6fce782ef6cc5828d5f2e7f82cd2e67466d6 7732 snap-aligner_2.0.3+dfsg-1.debian.tar.xz Files: 0f41c32b741a1a0d43dfd09256ca2d12 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz 9fcc2bb653747685c133387dfce92069 7732 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F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./snap-aligner_2.0.3+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting snap-aligner in /<> dpkg-source: info: unpacking snap-aligner_2.0.3+dfsg.orig.tar.xz dpkg-source: info: unpacking snap-aligner_2.0.3+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying non-x86-and-kfreebsd dpkg-source: info: applying drop-msse dpkg-source: info: applying simde Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.hUEZZ00EeL/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-8ddabfcf-4f0b-4f8a-a022-27135badfd33 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package snap-aligner dpkg-buildpackage: info: source version 2.0.3+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' rm -f SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/snap/Main.o apps/snap/stdafx.o tests/AffineGapTest.o tests/AffineGapVectorizedTest.o tests/EventTest.o tests/LandauVishkinTest.o tests/ProbabilityDistanceTest.o tests/TestLib.o tests/main.o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o snap-aligner unit_tests SNAPCommand snap SNAP make[2]: Leaving directory '/<>' rm -f debian/*.1 rm -f */*.d */*/*.d make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=powerpc64le-linux-gnu-pkg-config CXX=powerpc64le-linux-gnu-g\+\+ CC=powerpc64le-linux-gnu-gcc make[2]: Entering directory '/<>' powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AffineGap.o SNAPLib/AffineGap.cpp In file included from SNAPLib/AffineGap.cpp:2: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AffineGapVectorized.o SNAPLib/AffineGapVectorized.cpp In file included from SNAPLib/AffineGapVectorized.cpp:2: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerContext.o SNAPLib/AlignerContext.cpp In file included from SNAPLib/AlignerContext.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerOptions.o SNAPLib/AlignerOptions.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignerOptions.h:29, from SNAPLib/AlignerOptions.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerStats.o SNAPLib/AlignerStats.cpp In file included from SNAPLib/AlignerStats.h:29, from SNAPLib/AlignerStats.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentAdjuster.cpp In file included from SNAPLib/HashTable.h:23, from SNAPLib/GenomeIndex.h:27, from SNAPLib/AlignmentAdjuster.h:27, from SNAPLib/AlignmentAdjuster.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignmentResult.o SNAPLib/AlignmentResult.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/AlignmentResult.cpp:23: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ApproximateCounter.o SNAPLib/ApproximateCounter.cpp In file included from SNAPLib/ApproximateCounter.h:3, from SNAPLib/ApproximateCounter.cpp:3: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Bam.o SNAPLib/Bam.cpp In file included from SNAPLib/SAM.h:22, from SNAPLib/Bam.cpp:20: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BaseAligner.o SNAPLib/BaseAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/BaseAligner.h:30, from SNAPLib/BaseAligner.cpp:29: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BigAlloc.o SNAPLib/BigAlloc.cpp In file included from SNAPLib/BigAlloc.cpp:24: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BufferedAsync.o SNAPLib/BufferedAsync.cpp In file included from SNAPLib/BufferedAsync.cpp:21: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ChimericPairedEndAligner.o SNAPLib/ChimericPairedEndAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/PairedEndAligner.h:25, from SNAPLib/ChimericPairedEndAligner.h:27, from SNAPLib/ChimericPairedEndAligner.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/CommandProcessor.o SNAPLib/CommandProcessor.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/FASTA.h:27, from SNAPLib/CommandProcessor.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Compat.o SNAPLib/Compat.cpp In file included from SNAPLib/Compat.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/DataReader.o SNAPLib/DataReader.cpp In file included from SNAPLib/DataReader.cpp:22: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/DataReader.cpp: In static member function ‘static bool DecompressDataReader::decompress(z_stream*, ThreadHeap*, char*, _int64, _int64*, char*, _int64, _int64*, DecompressMode)’: SNAPLib/DataReader.cpp:2052:53: warning: format ‘%llx’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2052 | fprintf(stderr, "\n0x%llx\t", offset); | ~~~^ ~~~~~~ | | | | | _int64 {aka long int} | long long unsigned int | %lx SNAPLib/DataReader.cpp: In member function ‘char* DecompressDataReader::findPointer(void*)’: SNAPLib/DataReader.cpp:2105:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2105 | sprintf(result, "compressed #%d @ %lld", i, (char*)p - e->compressed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp:2109:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2109 | sprintf(result, "decompressed #%d %lld", i, (char*) p - e->decompressed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp:2113:43: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2113 | sprintf(result, "extra #%d %lld", i, (char*) p - e->decompressed - extraBytes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp: In static member function ‘static void DecompressDataReader::decompressThread(void*)’: SNAPLib/DataReader.cpp:2261:174: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2261 | fprintf(stderr, "Bug in DecompressDataReader::decompressThread(); don't have enough decompress buffer when we thought we'd assured it. Existing size %lld, needed (at least) %lld, entry @0x%p\n", entry->decompressedSize, output, entry); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/DataReader.cpp:2261:198: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2261 | fprintf(stderr, "Bug in DecompressDataReader::decompressThread(); don't have enough decompress buffer when we thought we'd assured it. Existing size %lld, needed (at least) %lld, entry @0x%p\n", entry->decompressedSize, output, entry); | ~~~^ ~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/DataReader.cpp:2265:74: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2265 | fprintf(stderr, "error reading BAM file at offset %lld\n", reader->getFileOffset()); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/DataWriter.o SNAPLib/DataWriter.cpp In file included from SNAPLib/DataWriter.cpp:21: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Error.o SNAPLib/Error.cpp In file included from SNAPLib/Error.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/Error.cpp: In function ‘void WriteProgressCounter(const char*, _int64)’: SNAPLib/Error.cpp:96:49: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 96 | fprintf(stderr,"reporter:counter:SNAP,%s,%lld\n", counterName, increment); | ~~~^ ~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/FASTA.o SNAPLib/FASTA.cpp In file included from SNAPLib/FASTA.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/FASTQ.o SNAPLib/FASTQ.cpp In file included from SNAPLib/FASTQ.h:30, from SNAPLib/FASTQ.cpp:29: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile.o SNAPLib/GenericFile.cpp In file included from SNAPLib/GenericFile.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_Blob.cpp In file included from SNAPLib/GenericFile.h:25, from SNAPLib/GenericFile_Blob.h:26, from SNAPLib/GenericFile_Blob.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_HDFS.cpp powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_map.cpp In file included from SNAPLib/GenericFile.h:25, from SNAPLib/GenericFile_Blob.h:26, from SNAPLib/GenericFile_map.h:26, from SNAPLib/GenericFile_map.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_stdio.o SNAPLib/GenericFile_stdio.cpp In file included from SNAPLib/GenericFile_stdio.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Genome.o SNAPLib/Genome.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/Genome.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/Genome.cpp: In member function ‘bool Genome::saveToFile(const char*) const’: SNAPLib/Genome.cpp:216:26: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘long int’ [-Wformat=] 216 | fprintf(saveFile,"%lld %d %d\n",nBases, nContigs, GENOME_FLAG_ALT_CONTIGS_MARKED); | ~~~^ ~~~~~~ | | | | | long int | long long int | %ld SNAPLib/Genome.cpp:226:31: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 226 | fprintf(saveFile, "%lld %x %d %lld %x %d %d %s %s\n", GenomeLocationAsInt64(contigs[i].beginningLocation), (contigs[i].isALT ? GENOME_FLAG_CONTIG_IS_ALT : 0), OriginalContigNumToInt(contigs[i].originalContigNumber), GenomeLocationAsInt64(contigs[i].projBeginningLocation), | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/Genome.cpp:226:42: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 226 | fprintf(saveFile, "%lld %x %d %lld %x %d %d %s %s\n", GenomeLocationAsInt64(contigs[i].beginningLocation), (contigs[i].isALT ? GENOME_FLAG_CONTIG_IS_ALT : 0), OriginalContigNumToInt(contigs[i].originalContigNumber), GenomeLocationAsInt64(contigs[i].projBeginningLocation), | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/Genome.cpp: In static member function ‘static const Genome* Genome::loadFromFile(const char*, unsigned int, GenomeLocation, GenomeDistance, bool)’: SNAPLib/Genome.cpp:356:47: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 3 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 356 | if (7 != sscanf(contigNameBuffer, "%lld %x %d %lld %x %d %d", &contigStart, &flags, &originalContigNumber, &projContigStart, &altProjRC, &contigNameSize, &cigarLength)) { | ~~~^ ~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/Genome.cpp:356:58: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 6 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 356 | if (7 != sscanf(contigNameBuffer, "%lld %x %d %lld %x %d %d", &contigStart, &flags, &originalContigNumber, &projContigStart, &altProjRC, &contigNameSize, &cigarLength)) { | ~~~^ ~~~~~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/Genome.cpp: In static member function ‘static bool Genome::openFileAndGetSizes(const char*, GenericFile**, GenomeDistance*, unsigned int*, bool)’: SNAPLib/Genome.cpp:497:51: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 3 has type ‘GenomeDistance*’ {aka ‘long int*’} [-Wformat=] 497 | if (NULL == retval || 3 != sscanf(linebuf,"%lld %d %d\n", nBases, nContigs, &flags)) { | ~~~^ ~~~~~~ | | | | | GenomeDistance* {aka long int*} | long long int* | %ld powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenomeIndex.o SNAPLib/GenomeIndex.cpp In file included from SNAPLib/ApproximateCounter.h:3, from SNAPLib/GenomeIndex.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/GenomeIndex.cpp: In static member function ‘static bool GenomeIndex::BuildIndexToDirectory(const Genome*, int, double, const char*, unsigned int, unsigned int, bool, unsigned int, bool, const char*, unsigned int, bool)’: SNAPLib/GenomeIndex.cpp:952:36: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:952:61: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:952:103: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:1007:36: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 1007 | fprintf(indexFile,"%d %d %d %lld %d %d %d %lld %d %d", GenomeIndexFormatMajorVersion, GenomeIndexFormatMinorVersion, index->nHashTables, | ~~~^ | | | long long int | %ld 1008 | index->overflowTableSize, seedLen, chromosomePaddingSize, hashTableKeySize, totalBytesWritten, large ? 0 : 1, locationSize); | ~~~~~~~~~~~~~~~~~~~~~~~~ | | | _uint64 {aka long unsigned int} SNAPLib/GenomeIndex.cpp:1007:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 10 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1007 | fprintf(indexFile,"%d %d %d %lld %d %d %d %lld %d %d", GenomeIndexFormatMajorVersion, GenomeIndexFormatMinorVersion, index->nHashTables, | ~~~^ | | | long long int | %ld 1008 | index->overflowTableSize, seedLen, chromosomePaddingSize, hashTableKeySize, totalBytesWritten, large ? 0 : 1, locationSize); | ~~~~~~~~~~~~~~~~~ | | | size_t {aka long unsigned int} SNAPLib/GenomeIndex.cpp: In static member function ‘static GenomeIndex* GenomeIndex::loadFromDirectory(char*, bool, bool)’: SNAPLib/GenomeIndex.cpp:1879:57: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 6 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 1879 | if (10 != (nRead = sscanf(indexFileBuf,"%d %d %d %lld %d %d %d %lld %d %d", &majorVersion, &minorVersion, &nHashTables, &overflowTableSize, &seedLen, &chromosomePadding, | ~~~^ ~~~~~~~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/GenomeIndex.cpp:1879:71: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 10 has type ‘size_t*’ {aka ‘long unsigned int*’} [-Wformat=] 1879 | if (10 != (nRead = sscanf(indexFileBuf,"%d %d %d %lld %d %d %d %lld %d %d", &majorVersion, &minorVersion, &nHashTables, &overflowTableSize, &seedLen, &chromosomePadding, | ~~~^ | | | long long int* | %ld 1880 | &hashTableKeySize, &hashTablesFileSize, &smallHashTable, &locationSize))) { | ~~~~~~~~~~~~~~~~~~~ | | | size_t* {aka long unsigned int*} powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GzipDataWriter.o SNAPLib/GzipDataWriter.cpp In file included from SNAPLib/GzipDataWriter.h:25, from SNAPLib/GzipDataWriter.cpp:20: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/HashTable.o SNAPLib/HashTable.cpp In file included from SNAPLib/HashTable.h:23, from SNAPLib/HashTable.cpp:20: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Histogram.o SNAPLib/Histogram.cpp In file included from SNAPLib/Histogram.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/HitDepth.o SNAPLib/HitDepth.cpp In file included from SNAPLib/HitDepth.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/IntersectingPairedEndAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/PairedEndAligner.h:25, from SNAPLib/IntersectingPairedEndAligner.h:25, from SNAPLib/IntersectingPairedEndAligner.cpp:24: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/IntersectingPairedEndAligner.h:767:71: warning: non-static data member initializers only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/IntersectingPairedEndAligner.h:767:104: warning: extended initializer lists only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/LandauVishkin.o SNAPLib/LandauVishkin.cpp In file included from SNAPLib/LandauVishkin.cpp:2: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/MultiInputReadSupplier.o SNAPLib/MultiInputReadSupplier.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/MultiInputReadSupplier.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/PairedAligner.o SNAPLib/PairedAligner.cpp In file included from SNAPLib/PairedAligner.cpp:34: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | In file included from SNAPLib/PairedAligner.cpp:47: SNAPLib/IntersectingPairedEndAligner.h:767:71: warning: non-static data member initializers only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/IntersectingPairedEndAligner.h:767:104: warning: extended initializer lists only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/PairedAligner.cpp: In member function ‘void PairedAlignerContext::runIterationThreadImpl(Read**)’: SNAPLib/PairedAligner.cpp:673:72: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘long unsigned int’ [-Wformat=] 673 | fprintf(stderr, "reporter:counter:SNAP,readsAligned,%llu\n", stats->totalReads - readsWhenLastReported); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long unsigned int | %lu powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/PairedReadMatcher.o SNAPLib/PairedReadMatcher.cpp In file included from SNAPLib/PairedReadMatcher.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ParallelTask.o SNAPLib/ParallelTask.cpp In file included from SNAPLib/ParallelTask.h:25, from SNAPLib/ParallelTask.cpp:18: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ProbabilityDistance.o SNAPLib/ProbabilityDistance.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/ProbabilityDistance.h:3, from SNAPLib/ProbabilityDistance.cpp:2: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/RangeSplitter.o SNAPLib/RangeSplitter.cpp In file included from SNAPLib/RangeSplitter.h:29, from SNAPLib/RangeSplitter.cpp:28: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Read.o SNAPLib/Read.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/Read.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadReader.o SNAPLib/ReadReader.cpp In file included from SNAPLib/ReadReader.cpp:19: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/ReadReader.cpp: In member function ‘virtual bool SimpleReadReader::getNextRead(Read*, AlignmentResult*, unsigned int*, bool*, unsigned int*, unsigned int*, const char**)’: SNAPLib/ReadReader.cpp:44:5: warning: no return statement in function returning non-void [-Wreturn-type] 44 | } | ^ powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadSupplierQueue.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/ReadSupplierQueue.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadWriter.o SNAPLib/ReadWriter.cpp In file included from SNAPLib/ReadWriter.cpp:21: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SAM.o SNAPLib/SAM.cpp In file included from SNAPLib/SAM.cpp:21: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeHeader(const ReaderContext&, char*, size_t, size_t*, bool, int, const char**, const char*, const char*, bool) const’: SNAPLib/SAM.cpp:1292:116: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 5 has type ‘long int’ [-Wformat=] 1292 | bytesConsumed += snprintf(header + bytesConsumed, headerBufferSize - bytesConsumed, "@SQ\tSN:%s\tLN:%llu%s\n", contig->name, contig->length - context.genome->getChromosomePadding(), contig->isALT ? "\tAH:*":""); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long int | %lu SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writePairs(const ReaderContext&, LandauVishkinWithCigar*, AffineGapVectorizedWithCigar*, bool, char*, size_t, size_t*, size_t*, Read**, GenomeLocation*, PairedAlignmentResult*, bool, bool, char*, bool, int*, int*, bool*, bool*) const’: SNAPLib/SAM.cpp:1854:77: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 1854 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%d\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 1858 | positionInContig[whichRead], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:1854:95: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 1854 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%d\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 1862 | matePositionInContig[whichRead], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeRead(const ReaderContext&, LandauVishkinWithCigar*, char*, size_t, size_t*, size_t, Read*, AlignmentResult, int, GenomeLocation, Direction, bool, bool, int*, int, bool, char*, bool, _int64, int, int, bool, bool, Read*, AlignmentResult, GenomeLocation, Direction, bool, int, int) const’: SNAPLib/SAM.cpp:2076:73: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2080 | positionInContig, | ~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2076:91: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2084 | matePositionInContig, | ~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2076:97: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 13 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long int | %ld ...... 2085 | templateLength, | ~~~~~~~~~~~~~~ | | | _int64 {aka long int} SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeRead(const ReaderContext&, AffineGapVectorizedWithCigar*, char*, size_t, size_t*, size_t, Read*, AlignmentResult, int, GenomeLocation, Direction, bool, bool, int*, int, int, bool, char*, bool, _int64, int, int, bool, bool, Read*, AlignmentResult, GenomeLocation, Direction, bool, int, int) const’: SNAPLib/SAM.cpp:2312:73: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2316 | positionInContig, | ~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2312:91: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2320 | matePositionInContig, | ~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2312:97: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 13 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long int | %ld ...... 2321 | templateLength, | ~~~~~~~~~~~~~~ | | | _int64 {aka long int} SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2650:58: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp:2654:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2745:58: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp:2749:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp: In static member function ‘static void SAMFormat::printRead(const Genome*, Read*, GenomeLocation)’: SNAPLib/SAM.cpp:2820:40: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘GenomeLocation’ {aka ‘long int’} [-Wformat=] 2820 | printf("Aligned location %s:%llu\n", | ~~~^ | | | long long unsigned int | %lu 2821 | genome->getContigAtLocation(location)->name, 2822 | location - genome->getContigAtLocation(location)->beginningLocation); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeLocation {aka long int} SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2650:55: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~ SNAPLib/SAM.cpp:2650:54: note: directive argument in the range [1, 9223372036854775807] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~~~~ In file included from /usr/powerpc64le-linux-gnu/include/stdio.h:906, from /usr/powerpc64le-linux-gnu/include/c++/13/cstdio:42, from /usr/powerpc64le-linux-gnu/include/c++/13/fstream:43, from SNAPLib/stdafx.h:14, from SNAPLib/SAM.cpp:19: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2650:21: /usr/powerpc64le-linux-gnu/include/bits/stdio2.h:54:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2654:53: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~ SNAPLib/SAM.cpp:2654:52: note: directive argument in the range [1, 9223372036854775807] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2654:21: /usr/powerpc64le-linux-gnu/include/bits/stdio2.h:54:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2745:55: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~ SNAPLib/SAM.cpp:2745:54: note: directive argument in the range [1, 9223372036854775807] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2745:21: /usr/powerpc64le-linux-gnu/include/bits/stdio2.h:54:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2749:53: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~ SNAPLib/SAM.cpp:2749:52: note: directive argument in the range [1, 9223372036854775807] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2749:21: /usr/powerpc64le-linux-gnu/include/bits/stdio2.h:54:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Seed.o SNAPLib/Seed.cpp In file included from SNAPLib/Seed.h:27, from SNAPLib/Seed.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SeedSequencer.o SNAPLib/SeedSequencer.cpp In file included from SNAPLib/Seed.h:27, from SNAPLib/SeedSequencer.h:27, from SNAPLib/SeedSequencer.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SingleAligner.o SNAPLib/SingleAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/BaseAligner.h:30, from SNAPLib/SingleAligner.cpp:27: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/SingleAligner.cpp: In member function ‘virtual void SingleAlignerContext::runIterationThreadImpl(Read*&)’: SNAPLib/SingleAligner.cpp:207:67: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘long unsigned int’ [-Wformat=] 207 | fprintf(stderr,"reporter:counter:SNAP,readsAligned,%llu\n",stats->totalReads - readsWhenLastReported); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long unsigned int | %lu powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SortedDataWriter.o SNAPLib/SortedDataWriter.cpp In file included from SNAPLib/SortedDataWriter.cpp:21: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Tables.o SNAPLib/Tables.cpp powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Util.o SNAPLib/Util.cpp In file included from SNAPLib/Util.h:5, from SNAPLib/Util.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | SNAPLib/Util.cpp: In function ‘char* FormatUIntWithCommas(_uint64, char*, size_t, size_t)’: SNAPLib/Util.cpp:167:49: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 167 | sprintf(tempBuf, ",%03lld", x % 1000); | ~~~~~^ ~~~~~~~~ | | | | | _uint64 {aka long unsigned int} | long long int | %03ld SNAPLib/Util.cpp:170:46: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 170 | sprintf(tempBuf, "%lld", x); | ~~~^ ~ | | | | | _uint64 {aka long unsigned int} | long long int | %ld powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/exit.o SNAPLib/exit.cpp In file included from SNAPLib/Error.h:25, from SNAPLib/exit.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/mapq.o SNAPLib/mapq.cpp In file included from SNAPLib/mapq.cpp:25: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/stdafx.o SNAPLib/stdafx.cpp powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/snap/Main.o apps/snap/Main.cpp In file included from SNAPLib/CommandProcessor.h:24, from apps/snap/Main.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/snap/stdafx.o apps/snap/stdafx.cpp powerpc64le-linux-gnu-g++ -o snap-aligner -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Itests -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/snap/Main.o apps/snap/stdafx.o -lrt -lz powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/AffineGapTest.o tests/AffineGapTest.cpp In file included from SNAPLib/AffineGap.h:3, from tests/AffineGapTest.cpp:3: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/AffineGapVectorizedTest.o tests/AffineGapVectorizedTest.cpp In file included from SNAPLib/AffineGapVectorized.h:7, from tests/AffineGapVectorizedTest.cpp:3: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/EventTest.o tests/EventTest.cpp In file included from SNAPLib/LandauVishkin.h:2, from tests/EventTest.cpp:3: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/LandauVishkinTest.o tests/LandauVishkinTest.cpp In file included from SNAPLib/LandauVishkin.h:2, from tests/LandauVishkinTest.cpp:3: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/ProbabilityDistanceTest.o tests/ProbabilityDistanceTest.cpp In file included from tests/ProbabilityDistanceTest.cpp:2: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/TestLib.o tests/TestLib.cpp powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/main.o tests/main.cpp powerpc64le-linux-gnu-g++ -o unit_tests -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Itests -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o tests/AffineGapTest.o tests/AffineGapVectorizedTest.o tests/EventTest.o tests/LandauVishkinTest.o tests/ProbabilityDistanceTest.o tests/TestLib.o tests/main.o -lrt -lz powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/SNAPCommand.cpp In file included from apps/SNAPCommand/SNAPCommand.cpp:26: SNAPLib/Compat.h:87: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3480: note: this is the location of the previous definition 3480 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | SNAPLib/Compat.h:88: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | /usr/include/simde/x86/sse.h:3482: note: this is the location of the previous definition 3482 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | SNAPLib/Compat.h:89: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | /usr/include/simde/x86/sse.h:3484: note: this is the location of the previous definition 3484 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/SNAPCommand/stdafx.o apps/SNAPCommand/stdafx.cpp echo SNAPCOMMAND_OBJ is apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o SNAPCOMMAND_OBJ is apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o echo SNAP_OBJ is apps/snap/Main.o apps/snap/stdafx.o SNAP_OBJ is apps/snap/Main.o apps/snap/stdafx.o powerpc64le-linux-gnu-g++ -o SNAPCommand -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o -lrt -lz make[2]: Leaving directory '/<>' help2man --no-discard-stderr --no-info --version-string="2.0.3" \ --name "scalable nucleotide alignment program" \ --help-option=" " ./snap-aligner > debian/snap-aligner.1 for option in index single paired; do help2man \ --no-discard-stderr --no-info --version-string="2.0.3" \ --include=debian/snap-aligner-${option}-man-include \ --help-option=" " "./snap-aligner ${option}" > \ debian/snap-aligner-${option}.1; done help2man --no-discard-stderr --no-info --version-string="2.0.3" \ --name "scalable nucleotide alignment program" \ --help-option=" " ./SNAPCommand > debian/SNAPCommand.1 make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/snap-aligner/ -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'snap-aligner' in '../snap-aligner_2.0.3+dfsg-1_ppc64el.deb'. dpkg-deb: building package 'snap-aligner-dbgsym' in '../snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb'. dpkg-genbuildinfo --build=any -O../snap-aligner_2.0.3+dfsg-1_ppc64el.buildinfo dpkg-genchanges --build=any -O../snap-aligner_2.0.3+dfsg-1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-11-11T15:20:30Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ snap-aligner_2.0.3+dfsg-1_ppc64el.changes: ------------------------------------------ Format: 1.8 Date: Thu, 24 Aug 2023 11:17:57 +0200 Source: snap-aligner Binary: snap-aligner snap-aligner-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 2.0.3+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: snap-aligner - Scalable Nucleotide Alignment Program Changes: snap-aligner (2.0.3+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version * Remove program version from reference file to not being forced to adapt the reference for every new release Checksums-Sha1: 0a05ef1e715c0dad05d7d1fa85b08d5cbdf497d6 2507860 snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb c3e3caa0f82880d888c15640239e1a056532069e 5465 snap-aligner_2.0.3+dfsg-1_ppc64el.buildinfo ef63f5e5e103de9e48644462043792b810028084 844396 snap-aligner_2.0.3+dfsg-1_ppc64el.deb Checksums-Sha256: 12eff794a159e3172d1d17aba246edadcef73e3c8a6f227bd26935f7d48aae1b 2507860 snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb 1e1649051e97cb5d219f0aabe7e4eab02e574f7a197e05e424a3345a8a0a94e4 5465 snap-aligner_2.0.3+dfsg-1_ppc64el.buildinfo 0fbd0c1b8f8eb1e2f4a712a660afeae3f3a2a2afce6604e1058b1f8d3dfc4d93 844396 snap-aligner_2.0.3+dfsg-1_ppc64el.deb Files: c0bbdd356403bb028139e72cfefe825a 2507860 debug optional snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb 55d99726441eefb5b687fdc0a624b9a1 5465 science optional snap-aligner_2.0.3+dfsg-1_ppc64el.buildinfo 89310fb2acaaf51de81a54facb4a64e2 844396 science optional snap-aligner_2.0.3+dfsg-1_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: snap-aligner Binary: snap-aligner snap-aligner-dbgsym Architecture: ppc64el Version: 2.0.3+dfsg-1 Checksums-Md5: c0bbdd356403bb028139e72cfefe825a 2507860 snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb 89310fb2acaaf51de81a54facb4a64e2 844396 snap-aligner_2.0.3+dfsg-1_ppc64el.deb Checksums-Sha1: 0a05ef1e715c0dad05d7d1fa85b08d5cbdf497d6 2507860 snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb ef63f5e5e103de9e48644462043792b810028084 844396 snap-aligner_2.0.3+dfsg-1_ppc64el.deb Checksums-Sha256: 12eff794a159e3172d1d17aba246edadcef73e3c8a6f227bd26935f7d48aae1b 2507860 snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb 0fbd0c1b8f8eb1e2f4a712a660afeae3f3a2a2afce6604e1058b1f8d3dfc4d93 844396 snap-aligner_2.0.3+dfsg-1_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 11 Nov 2023 15:20:30 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.2), bash (= 5.2.15-2+b6), binutils (= 2.41-6), binutils-common (= 2.41-6), binutils-x86-64-linux-gnu (= 2.41-6), bsdextrautils (= 2.39.2-5), bsdutils (= 1:2.39.2-5), build-essential (= 12.10), bzip2 (= 1.0.8-5+b1), coreutils (= 9.4-2+b1), cpp (= 4:13.2.0-1), cpp-11 (= 11.4.0-5), cpp-13 (= 13.2.0-6), dash (= 0.5.12-6), debconf (= 1.5.82), debhelper (= 13.11.7), debianutils (= 5.14), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.1), dpkg-dev (= 1.22.1), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), g++ (= 4:13.2.0-1), g++-13 (= 13.2.0-6), gcc (= 4:13.2.0-1), gcc-11 (= 11.4.0-5), gcc-11-base (= 11.4.0-5), gcc-13 (= 13.2.0-6), gcc-13-base (= 13.2.0-6), gettext (= 0.21-13+b1), gettext-base (= 0.21-13+b1), grep (= 3.11-3), groff-base (= 1.23.0-3), gzip (= 1.12-1), help2man (= 1.49.3), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.4.0-5), libasan8 (= 13.2.0-6), libatomic1 (= 13.2.0-6), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.1-1), libaudit1 (= 1:3.1.1-1), libbinutils (= 2.41-6), libblkid1 (= 2.39.2-5), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.37-12), libc-dev-bin (= 2.37-12), libc6 (= 2.37-12), libc6-dev (= 2.37-12), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-4), libcc1-0 (= 13.2.0-6), libcom-err2 (= 1.47.0-2+b1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41-6), libctf0 (= 2.41-6), libdb5.3 (= 5.3.28+dfsg2-4), libdebconfclient0 (= 0.271), libdebhelper-perl (= 13.11.7), libdpkg-perl (= 1.22.1), libelf1 (= 0.189-4), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.4.0-5), libgcc-13-dev (= 13.2.0-6), libgcc-s1 (= 13.2.0-6), libgcrypt20 (= 1.10.2-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.3.0+dfsg-2), libgomp1 (= 13.2.0-6), libgpg-error0 (= 1.47-2), libgprofng0 (= 2.41-6), libgssapi-krb5-2 (= 1.20.1-5), libhwasan0 (= 13.2.0-6), libicu72 (= 72.1-4), libisl23 (= 0.26-3), libitm1 (= 13.2.0-6), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-5), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-5), libkrb5support0 (= 1.20.1-5), liblocale-gettext-perl (= 1.07-6), liblsan0 (= 13.2.0-6), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.4.4-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmount1 (= 2.39.2-5), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libnumber-compare-perl (= 0.03-3), libpam-modules (= 1.5.2-9.1), libpam-modules-bin (= 1.5.2-9.1), libpam-runtime (= 1.5.2-9.1), libpam0g (= 1.5.2-9.1), libpcre2-8-0 (= 10.42-4), libperl5.36 (= 5.36.0-9), libpipeline1 (= 1.5.7-1), libquadmath0 (= 13.2.0-6), libseccomp2 (= 2.5.4-2), libselinux1 (= 3.5-1), libsframe1 (= 2.41-6), libsimde-dev (= 0.7.6-1), libsmartcols1 (= 2.39.2-5), libssl3 (= 3.0.12-2), libstdc++-13-dev (= 13.2.0-6), libstdc++6 (= 13.2.0-6), libsub-override-perl (= 0.09-4), libsystemd0 (= 254.5-1), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20231016-1), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-7), libtsan0 (= 11.4.0-5), libtsan2 (= 13.2.0-6), libubsan1 (= 13.2.0-6), libuchardet0 (= 0.0.7-1), libudev1 (= 254.5-1), libunistring5 (= 1.1-2), libuuid1 (= 2.39.2-5), libxml2 (= 2.9.14+dfsg-1.3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.5.10-1), login (= 1:4.13+dfsg1-3), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.0-1), mawk (= 1.3.4.20230808-1), ncurses-base (= 6.4+20231016-1), ncurses-bin (= 6.4+20231016-1), patch (= 2.7.6-7), perl (= 5.36.0-9), perl-base (= 5.36.0-9), perl-modules-5.36 (= 5.36.0-9), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.08-3), tar (= 1.34+dfsg-1.2), usrmerge (= 38), util-linux (= 2.39.2-5), xz-utils (= 5.4.4-0.1), zlib1g (= 1:1.2.13.dfsg-3), zlib1g-dev (= 1:1.2.13.dfsg-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1692868677" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ snap-aligner-dbgsym_2.0.3+dfsg-1_ppc64el.deb -------------------------------------------- new Debian package, version 2.0. size 2507860 bytes: control archive=656 bytes. 444 bytes, 12 lines control 306 bytes, 3 lines md5sums Package: snap-aligner-dbgsym Source: snap-aligner Version: 2.0.3+dfsg-1 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 2723 Depends: snap-aligner (= 2.0.3+dfsg-1) Section: debug Priority: optional Description: debug symbols for snap-aligner Build-Ids: cf01a28d6012517be7499f3903e4c27d48a70960 ddc08c871bfbb150feae3c4b61cce07ce4a1da83 drwxr-xr-x root/root 0 2023-08-24 09:17 ./ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/lib/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/lib/debug/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/lib/debug/.build-id/cf/ -rw-r--r-- root/root 1245688 2023-08-24 09:17 ./usr/lib/debug/.build-id/cf/01a28d6012517be7499f3903e4c27d48a70960.debug drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/lib/debug/.build-id/dd/ -rw-r--r-- root/root 1247184 2023-08-24 09:17 ./usr/lib/debug/.build-id/dd/c08c871bfbb150feae3c4b61cce07ce4a1da83.debug drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 280768 2023-08-24 09:17 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/snap-aligner.debug drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc/ lrwxrwxrwx root/root 0 2023-08-24 09:17 ./usr/share/doc/snap-aligner-dbgsym -> snap-aligner snap-aligner_2.0.3+dfsg-1_ppc64el.deb ------------------------------------- new Debian package, version 2.0. size 844396 bytes: control archive=1784 bytes. 967 bytes, 18 lines control 2591 bytes, 32 lines md5sums Package: snap-aligner Version: 2.0.3+dfsg-1 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 2449 Depends: libc6 (>= 2.34), libgcc-s1 (>= 4.0), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.3.4) Section: science Priority: optional Homepage: https://snap.cs.berkeley.edu/ Description: Scalable Nucleotide Alignment Program SNAP is a new sequence aligner that is 3-20x faster and just as accurate as existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86 processors, and supports a rich error model that lets it cheaply match reads with more differences from the reference than other tools. This gives SNAP up to 2x lower error rates than existing tools (in some cases) and lets it match larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting, duplicate marking, and BAM indexing. drwxr-xr-x root/root 0 2023-08-24 09:17 ./ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/bin/ -rwxr-xr-x root/root 985624 2023-08-24 09:17 ./usr/bin/SNAPCommand -rwxr-xr-x root/root 985624 2023-08-24 09:17 ./usr/bin/snap-aligner drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc-base/ -rw-r--r-- root/root 815 2023-08-24 09:17 ./usr/share/doc-base/snap-aligner.snap-aligner-manual -rw-r--r-- root/root 833 2023-08-24 09:17 ./usr/share/doc-base/snap-aligner.snap-aligner-quickstart drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc/snap-aligner/ -rw-r--r-- root/root 103 2023-03-31 03:07 ./usr/share/doc/snap-aligner/NOTICE.txt -rw-r--r-- root/root 78557 2023-03-31 03:07 ./usr/share/doc/snap-aligner/QuickStart.pdf.gz -rw-r--r-- root/root 670 2023-08-24 09:17 ./usr/share/doc/snap-aligner/README.Debian -rw-r--r-- root/root 1631 2023-03-31 03:07 ./usr/share/doc/snap-aligner/README.md -rw-r--r-- root/root 434 2023-08-24 09:17 ./usr/share/doc/snap-aligner/README.test -rw-r--r-- root/root 396913 2023-03-31 03:07 ./usr/share/doc/snap-aligner/SNAP User Manual.pdf.gz -rw-r--r-- root/root 1060 2023-08-24 09:17 ./usr/share/doc/snap-aligner/changelog.Debian.gz -rw-r--r-- root/root 3972 2023-08-24 09:17 ./usr/share/doc/snap-aligner/copyright drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ -rw-r--r-- root/root 592 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-fq-datatest.sam -rw-r--r-- root/root 611 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-fq-datatest2.sam -rw-r--r-- root/root 717 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-sam-datatest.sam -rw-r--r-- root/root 726 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-sam-datatest2.sam -rw-r--r-- root/root 612 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.bam -rw-r--r-- root/root 210 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.fa -rw-r--r-- root/root 426 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.fq -rw-r--r-- root/root 720 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.sam -rw-r--r-- root/root 420 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest2.fa drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/datatest/ -rw-r--r-- root/root 4235 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/datatest/Genome -rw-r--r-- root/root 30 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/datatest/GenomeIndex drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/datatest2/ -rw-r--r-- root/root 6461 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/datatest2/Genome -rw-r--r-- root/root 30 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/datatest2/GenomeIndex -rw-r--r-- root/root 751 2023-08-24 09:17 ./usr/share/doc/snap-aligner/examples/ref/output.sam -rw-r--r-- root/root 1066 2023-08-24 09:17 ./usr/share/doc/snap-aligner/run-unit-test drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/man/ drwxr-xr-x root/root 0 2023-08-24 09:17 ./usr/share/man/man1/ -rw-r--r-- root/root 336 2023-08-24 09:17 ./usr/share/man/man1/SNAPCommand.1.gz -rw-r--r-- root/root 422 2023-08-24 09:17 ./usr/share/man/man1/snap-aligner-index.1.gz -rw-r--r-- root/root 422 2023-08-24 09:17 ./usr/share/man/man1/snap-aligner-paired.1.gz -rw-r--r-- root/root 422 2023-08-24 09:17 ./usr/share/man/man1/snap-aligner-single.1.gz -rw-r--r-- root/root 409 2023-08-24 09:17 ./usr/share/man/man1/snap-aligner.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1338 B] Get:5 copy:/<>/apt_archive ./ Packages [1421 B] Fetched 3374 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:ppc64el t1utils unzip 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 13.8 MB of archives. After this operation, 51.5 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [856 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.12-2 [1419 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.6-1 [49.9 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.44.0-1 [881 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.21-1 [95.6 kB] Get:29 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:30 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.60-1 [219 kB] Get:31 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:35 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:36 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:37 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.37-1 [131 kB] Get:42 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:43 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.59-1 [43.6 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:48 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:56 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:61 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:62 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:64 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:65 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.45-1 [82.0 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:72 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:73 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:74 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.084-1 [216 kB] Get:75 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:76 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:77 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.72-1 [187 kB] Get:79 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:80 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:81 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:82 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:83 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-6 [37.8 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:89 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:91 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:92 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:94 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:95 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:96 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:97 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:98 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1 [12.5 kB] Get:100 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:101 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:102 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:104 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1 [43.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1 [99.5 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1 [102 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:109 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.38-1 [60.0 kB] Get:110 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1 [28.8 kB] Get:111 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:112 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:113 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:114 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:117 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:118 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:119 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:121 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-6 [63.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:123 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:124 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:125 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:126 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.8 MB in 0s (80.4 MB/s) Selecting previously unselected package netbase. (Reading database ... 21211 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.12-2_amd64.deb ... Unpacking openssl (3.0.12-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.6-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.6-1) ... Selecting previously unselected package libreadline8:amd64. 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Unpacking libapt-pkg-perl (0.1.40+b2) ... Selecting previously unselected package libb-hooks-op-check-perl:amd64. Preparing to unpack .../013-libb-hooks-op-check-perl_0.22-2+b1_amd64.deb ... Unpacking libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../014-libdynaloader-functions-perl_0.003-3_all.deb ... Unpacking libdynaloader-functions-perl (0.003-3) ... Selecting previously unselected package libdevel-callchecker-perl:amd64. Preparing to unpack .../015-libdevel-callchecker-perl_0.008-2_amd64.deb ... Unpacking libdevel-callchecker-perl:amd64 (0.008-2) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../016-libparams-classify-perl_0.015-2+b1_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2+b1) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../017-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../018-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../019-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../020-libsub-exporter-progressive-perl_0.001013-3_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-3) ... Selecting previously unselected package libvariable-magic-perl. Preparing to unpack .../021-libvariable-magic-perl_0.63-1+b1_amd64.deb ... Unpacking libvariable-magic-perl (0.63-1+b1) ... Selecting previously unselected package libb-hooks-endofscope-perl. Preparing to unpack .../022-libb-hooks-endofscope-perl_0.26-1_all.deb ... 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Preparing to unpack .../039-libcpanel-json-xs-perl_4.37-1_amd64.deb ... Unpacking libcpanel-json-xs-perl:amd64 (4.37-1) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../040-libdevel-stacktrace-perl_2.0400-2_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-2) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../041-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../042-libiterator-perl_0.03+ds1-2_all.deb ... Unpacking libiterator-perl (0.03+ds1-2) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../043-libiterator-util-perl_0.02+ds1-2_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-2) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../044-libdata-dpath-perl_0.59-1_all.deb ... 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Unpacking libhtml-html5-entities-perl (0.004-3) ... Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../067-libhtml-tree-perl_5.07-3_all.deb ... Unpacking libhtml-tree-perl (5.07-3) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../068-libhttp-cookies-perl_6.10-1_all.deb ... Unpacking libhttp-cookies-perl (6.10-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../069-libhttp-negotiate-perl_6.01-2_all.deb ... Unpacking libhttp-negotiate-perl (6.01-2) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../070-perl-openssl-defaults_7+b1_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (7+b1) ... Selecting previously unselected package libnet-ssleay-perl:amd64. Preparing to unpack .../071-libnet-ssleay-perl_1.92-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl:amd64 (1.92-2+b1) ... 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Setting up plzip (1.10-6) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.37-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:amd64 (3.44.0-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.025-1) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.6-1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004005-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.38-1) ... Setting up libipc-system-simple-perl (1.30-2) ... 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Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.12-2) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up readline-common (8.2-1.3) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.21-1) ... Setting up iso-codes (4.15.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.084-1) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.60-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.59-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.37-12) ... Processing triggers for man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 47372 Build-Time: 70 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 12 Job: snap-aligner_2.0.3+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: snap-aligner Package-Time: 94 Source-Version: 2.0.3+dfsg-1 Space: 47372 Status: successful Version: 2.0.3+dfsg-1 -------------------------------------------------------------------------------- Finished at 2023-11-11T15:20:30Z Build needed 00:01:34, 47372k disk space