sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | snap-aligner 2.0.3+dfsg-2 (riscv64) Wed, 23 Apr 2025 16:30:57 +0000 | +==============================================================================+ Package: snap-aligner Version: 2.0.3+dfsg-2 Source Version: 2.0.3+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: riscv64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-20fbeb32-a6cd-4c98-b355-d19d19eda1c1' with '<>' I: NOTICE: Log filtering will replace 'build/snap-aligner-PZ0mQR/resolver-e60qRJ' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [205 kB] Get:2 http://localhost:3142/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian unstable/non-free Sources.diff/Index [63.3 kB] Get:4 http://localhost:3142/debian unstable/contrib Sources.diff/Index [63.3 kB] Get:5 http://localhost:3142/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:6 http://localhost:3142/debian unstable/main Sources T-2025-04-23-1406.22-F-2025-04-22-2005.55.pdiff [35.1 kB] Get:7 http://localhost:3142/debian unstable/non-free Sources T-2025-04-23-1406.22-F-2025-04-23-1406.22.pdiff [31 B] Get:8 http://localhost:3142/debian unstable/contrib Sources T-2025-04-23-0205.14-F-2025-04-22-2005.55.pdiff [783 B] Get:6 http://localhost:3142/debian unstable/main Sources T-2025-04-23-1406.22-F-2025-04-22-2005.55.pdiff [35.1 kB] Get:9 http://localhost:3142/debian unstable/main amd64 Packages T-2025-04-23-1406.22-F-2025-04-22-2005.55.pdiff [39.3 kB] Get:8 http://localhost:3142/debian unstable/contrib Sources T-2025-04-23-0205.14-F-2025-04-22-2005.55.pdiff [783 B] Get:7 http://localhost:3142/debian unstable/non-free Sources T-2025-04-23-1406.22-F-2025-04-23-1406.22.pdiff [31 B] Get:9 http://localhost:3142/debian unstable/main amd64 Packages T-2025-04-23-1406.22-F-2025-04-22-2005.55.pdiff [39.3 kB] Get:10 http://localhost:3142/debian unstable/main riscv64 Packages [9762 kB] Fetched 10.3 MB in 3s (3697 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'snap-aligner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap-aligner.git Please use: git clone https://salsa.debian.org/med-team/snap-aligner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2033 kB of source archives. Get:1 http://localhost:3142/debian unstable/main snap-aligner 2.0.3+dfsg-2 (dsc) [2281 B] Get:2 http://localhost:3142/debian unstable/main snap-aligner 2.0.3+dfsg-2 (tar) [2023 kB] Get:3 http://localhost:3142/debian unstable/main snap-aligner 2.0.3+dfsg-2 (diff) [7788 B] Fetched 2033 kB in 1s (1436 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/snap-aligner-PZ0mQR/snap-aligner-2.0.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/snap-aligner-PZ0mQR' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 Filtered Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [756 B] Get:5 copy:/<>/apt_archive ./ Packages [801 B] Fetched 2166 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-riscv64-linux-gnu bsdextrautils cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:riscv64 libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcrypt-dev:riscv64 libcrypt1:riscv64 libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgomp1:riscv64 libgomp1-riscv64-cross libitm1:riscv64 libitm1-riscv64-cross liblocale-gettext-perl liblsan0:riscv64 liblsan0-riscv64-cross libmagic-mgc libmagic1t64 libpipeline1 libsimde-dev libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross libstdc++6:riscv64 libstdc++6-riscv64-cross libtool libtsan2:riscv64 libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libunistring5 libxml2 linux-libc-dev-riscv64-cross m4 man-db po-debconf sensible-utils zlib1g:riscv64 zlib1g-dev:riscv64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-riscv64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:riscv64 libc-l10n:riscv64 locales:riscv64 libnss-nis:riscv64 libnss-nisplus:riscv64 manpages-dev:riscv64 libstdc++-14-doc:riscv64 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:riscv64 libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-riscv64-linux-gnu bsdextrautils cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:riscv64 libasan8-riscv64-cross libatomic1:riscv64 libatomic1-riscv64-cross libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcrypt-dev:riscv64 libcrypt1:riscv64 libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgomp1:riscv64 libgomp1-riscv64-cross libitm1:riscv64 libitm1-riscv64-cross liblocale-gettext-perl liblsan0:riscv64 liblsan0-riscv64-cross libmagic-mgc libmagic1t64 libpipeline1 libsimde-dev libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross libstdc++6:riscv64 libstdc++6-riscv64-cross libtool libtsan2:riscv64 libtsan2-riscv64-cross libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libunistring5 libxml2 linux-libc-dev-riscv64-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:riscv64 sensible-utils zlib1g:riscv64 zlib1g-dev:riscv64 0 upgraded, 77 newly installed, 0 to remove and 0 not upgraded. Need to get 116 MB of archives. After this operation, 629 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [932 B] Get:2 http://localhost:3142/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:3 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.25 [25.0 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.46-5 [338 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.46-5 [109 kB] Get:6 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.46-5 [43.6 kB] Get:7 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.23.1-1 [243 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:9 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get:10 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.41-4 [94.6 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:12 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:13 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-8 [294 kB] Get:14 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3.1 [494 kB] Get:15 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20240727.1 [60.2 kB] Get:16 http://localhost:3142/debian unstable/main amd64 automake all 1:1.17-4 [862 kB] Get:17 http://localhost:3142/debian unstable/main amd64 autopoint all 0.23.1-1 [770 kB] Get:18 http://localhost:3142/debian unstable/main amd64 binutils-riscv64-linux-gnu amd64 2.44-3 [1428 kB] Get:19 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu-base amd64 14.2.0-19cross1 [49.6 kB] Get:20 http://localhost:3142/debian unstable/main amd64 cpp-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [13.3 MB] Get:21 http://localhost:3142/debian unstable/main amd64 cpp-riscv64-linux-gnu amd64 4:14.2.0-1 [4848 B] Get:22 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-19cross1 [44.9 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libc6-riscv64-cross all 2.41-6cross2 [1169 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libgcc-s1-riscv64-cross all 14.2.0-19cross1 [56.8 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libgomp1-riscv64-cross all 14.2.0-19cross1 [128 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libitm1-riscv64-cross all 14.2.0-19cross1 [25.2 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libatomic1-riscv64-cross all 14.2.0-19cross1 [8316 B] Get:28 http://localhost:3142/debian unstable/main amd64 libasan8-riscv64-cross all 14.2.0-19cross1 [2354 kB] Get:29 http://localhost:3142/debian unstable/main amd64 liblsan0-riscv64-cross all 14.2.0-19cross1 [1076 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libtsan2-riscv64-cross all 14.2.0-19cross1 [2230 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libstdc++6-riscv64-cross all 14.2.0-19cross1 [660 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libubsan1-riscv64-cross all 14.2.0-19cross1 [978 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-riscv64-cross all 14.2.0-19cross1 [5178 kB] Get:34 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [25.7 MB] Get:35 http://localhost:3142/debian unstable/main amd64 gcc-riscv64-linux-gnu amd64 4:14.2.0-1 [1444 B] Get:36 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-riscv64-cross all 6.12.17-1cross2 [2339 kB] Get:37 http://localhost:3142/debian unstable/main amd64 libc6-dev-riscv64-cross all 2.41-6cross2 [3123 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-riscv64-cross all 14.2.0-19cross1 [4940 kB] Get:39 http://localhost:3142/debian unstable/main amd64 g++-14-riscv64-linux-gnu amd64 14.2.0-19cross1 [14.3 MB] Get:40 http://localhost:3142/debian unstable/main amd64 g++-riscv64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:41 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-riscv64 all 12.12 [3544 B] Get:42 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.24.2 [90.9 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libtool all 2.5.4-4 [539 kB] Get:44 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:47 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:48 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:49 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.3-2 [477 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.4 [698 kB] Get:52 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.23.1-1 [1680 kB] Get:53 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:54 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:55 http://localhost:3142/debian unstable/main amd64 debhelper all 13.24.2 [919 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.37.1.1-1 [29.6 kB] Get:57 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.37.1.1-1 [76.0 kB] Get:58 http://localhost:3142/debian unstable/main riscv64 gcc-14-base riscv64 14.2.0-19 [49.4 kB] Get:59 http://localhost:3142/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB] Get:60 http://localhost:3142/debian unstable/main riscv64 libgcc-s1 riscv64 14.2.0-19 [56.8 kB] Get:61 http://localhost:3142/debian unstable/main riscv64 libc6 riscv64 2.41-7 [2466 kB] Get:62 http://localhost:3142/debian unstable/main riscv64 libasan8 riscv64 14.2.0-19 [2365 kB] Get:63 http://localhost:3142/debian unstable/main riscv64 libatomic1 riscv64 14.2.0-19 [8672 B] Get:64 http://localhost:3142/debian unstable/main riscv64 libcrypt1 riscv64 1:4.4.38-1 [106 kB] Get:65 http://localhost:3142/debian unstable/main riscv64 libcrypt-dev riscv64 1:4.4.38-1 [221 kB] Get:66 http://localhost:3142/debian unstable/main riscv64 libc6-dev riscv64 2.41-7 [3125 kB] Get:67 http://localhost:3142/debian unstable/main riscv64 libgomp1 riscv64 14.2.0-19 [130 kB] Get:68 http://localhost:3142/debian unstable/main riscv64 libitm1 riscv64 14.2.0-19 [25.8 kB] Get:69 http://localhost:3142/debian unstable/main riscv64 liblsan0 riscv64 14.2.0-19 [1078 kB] Get:70 http://localhost:3142/debian unstable/main riscv64 libtsan2 riscv64 14.2.0-19 [2241 kB] Get:71 http://localhost:3142/debian unstable/main riscv64 libstdc++6 riscv64 14.2.0-19 [707 kB] Get:72 http://localhost:3142/debian unstable/main riscv64 libubsan1 riscv64 14.2.0-19 [979 kB] Get:73 http://localhost:3142/debian unstable/main riscv64 libgcc-14-dev riscv64 14.2.0-19 [5190 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libsimde-dev all 0.8.2-3 [467 kB] Get:75 http://localhost:3142/debian unstable/main riscv64 libstdc++-14-dev riscv64 14.2.0-19 [5276 kB] Get:76 http://localhost:3142/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB] Get:77 http://localhost:3142/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-1+b1 [978 kB] Preconfiguring packages ... Fetched 116 MB in 1s (203 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12885 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.25_all.deb ... Unpacking sensible-utils (0.0.25) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.46-5_amd64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../03-libmagic1t64_1%3a5.46-5_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.46-5_amd64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. 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Unpacking gcc-14-riscv64-linux-gnu-base:amd64 (14.2.0-19cross1) ... Selecting previously unselected package cpp-14-riscv64-linux-gnu. Preparing to unpack .../18-cpp-14-riscv64-linux-gnu_14.2.0-19cross1_amd64.deb ... Unpacking cpp-14-riscv64-linux-gnu (14.2.0-19cross1) ... Selecting previously unselected package cpp-riscv64-linux-gnu. Preparing to unpack .../19-cpp-riscv64-linux-gnu_4%3a14.2.0-1_amd64.deb ... Unpacking cpp-riscv64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package gcc-14-cross-base. Preparing to unpack .../20-gcc-14-cross-base_14.2.0-19cross1_all.deb ... Unpacking gcc-14-cross-base (14.2.0-19cross1) ... Selecting previously unselected package libc6-riscv64-cross. Preparing to unpack .../21-libc6-riscv64-cross_2.41-6cross2_all.deb ... Unpacking libc6-riscv64-cross (2.41-6cross2) ... Selecting previously unselected package libgcc-s1-riscv64-cross. Preparing to unpack .../22-libgcc-s1-riscv64-cross_14.2.0-19cross1_all.deb ... 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Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libsimde-dev (0.8.2-3) ... Setting up bsdextrautils (2.41-4) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up gcc-14-base:riscv64 (14.2.0-19) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.2) ... Setting up libmagic1t64:amd64 (1:5.46-5) ... Setting up gettext-base (0.23.1-1) ... Setting up binutils-riscv64-linux-gnu (2.44-3) ... Setting up m4 (1.4.19-8) ... Setting up gcc-14-cross-base (14.2.0-19cross1) ... Setting up file (1:5.46-5) ... Setting up libfakeroot:amd64 (1.37.1.1-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up fakeroot (1.37.1.1-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20240727.1) ... Setting up gcc-14-riscv64-linux-gnu-base:amd64 (14.2.0-19cross1) ... Setting up libunistring5:amd64 (1.3-2) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.25) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up linux-libc-dev-riscv64-cross (6.12.17-1cross2) ... Setting up libc6-riscv64-cross (2.41-6cross2) ... Setting up libgomp1-riscv64-cross (14.2.0-19cross1) ... Setting up libatomic1-riscv64-cross (14.2.0-19cross1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.4) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-4) ... Setting up libitm1-riscv64-cross (14.2.0-19cross1) ... Setting up cpp-14-riscv64-linux-gnu (14.2.0-19cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libgcc-s1-riscv64-cross (14.2.0-19cross1) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up groff-base (1.23.0-7) ... Setting up libc6-dev-riscv64-cross (2.41-6cross2) ... Setting up libasan8-riscv64-cross (14.2.0-19cross1) ... Setting up cpp-riscv64-linux-gnu (4:14.2.0-1) ... Setting up libstdc++6-riscv64-cross (14.2.0-19cross1) ... Setting up libubsan1-riscv64-cross (14.2.0-19cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up liblsan0-riscv64-cross (14.2.0-19cross1) ... Setting up libtsan2-riscv64-cross (14.2.0-19cross1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-riscv64-cross (14.2.0-19cross1) ... Setting up libstdc++-14-dev-riscv64-cross (14.2.0-19cross1) ... Setting up debhelper (13.24.2) ... Setting up gcc-14-riscv64-linux-gnu (14.2.0-19cross1) ... Setting up g++-14-riscv64-linux-gnu (14.2.0-19cross1) ... Setting up gcc-riscv64-linux-gnu (4:14.2.0-1) ... Setting up g++-riscv64-linux-gnu (4:14.2.0-1) ... Setting up crossbuild-essential-riscv64 (12.12) ... Setting up libgcc-s1:riscv64 (14.2.0-19) ... Setting up libc6:riscv64 (2.41-7) ... Setting up libasan8:riscv64 (14.2.0-19) ... Setting up libtsan2:riscv64 (14.2.0-19) ... Setting up libstdc++6:riscv64 (14.2.0-19) ... Setting up liblsan0:riscv64 (14.2.0-19) ... Setting up libitm1:riscv64 (14.2.0-19) ... Setting up zlib1g:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:riscv64 (1:4.4.38-1) ... Setting up libgomp1:riscv64 (14.2.0-19) ... Setting up libatomic1:riscv64 (14.2.0-19) ... Setting up libubsan1:riscv64 (14.2.0-19) ... Setting up libcrypt-dev:riscv64 (1:4.4.38-1) ... Setting up libc6-dev:riscv64 (2.41-7) ... Setting up libgcc-14-dev:riscv64 (14.2.0-19) ... Setting up libstdc++-14-dev:riscv64 (14.2.0-19) ... Setting up zlib1g-dev:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up sbuild-build-depends-main-dummy:riscv64 (0.invalid.0) ... Processing triggers for libc-bin (2.41-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in amd64 arm64 mips64el ppc64el s390x alpha kfreebsd-amd64 ppc64 riscv64 sparc64 loong64) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) amd64 (x86_64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-7 libstdc++-14-dev_14.2.0-19 libstdc++-14-dev-riscv64-cross_14.2.0-19cross1 libstdc++6_14.2.0-19 libstdc++6-riscv64-cross_14.2.0-19cross1 linux-libc-dev_6.12.22-1 Package versions: apt_3.0.0 apt-utils_3.0.0 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-1 autotools-dev_20240727.1 base-files_13.7 base-passwd_3.6.7 bash_5.2.37-2 binutils_2.44-3 binutils-common_2.44-3 binutils-riscv64-linux-gnu_2.44-3 binutils-x86-64-linux-gnu_2.44-3 bsdextrautils_2.41-4 bsdutils_1:2.41-4 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-2 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-riscv64-linux-gnu_14.2.0-19cross1 cpp-14-x86-64-linux-gnu_14.2.0-19 cpp-riscv64-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-riscv64_12.12 dash_0.5.12-12 debconf_1.5.91 debhelper_13.24.2 debian-archive-keyring_2025.1 debianutils_5.22 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.18 dpkg-dev_1.22.18 dwz_0.15-1+b1 fakeroot_1.37.1.1-1 file_1:5.46-5 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-riscv64-linux-gnu_14.2.0-19cross1 g++-14-x86-64-linux-gnu_14.2.0-19 g++-riscv64-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-base_14.2.0-19 gcc-14-cross-base_14.2.0-19cross1 gcc-14-riscv64-linux-gnu_14.2.0-19cross1 gcc-14-riscv64-linux-gnu-base_14.2.0-19cross1 gcc-14-x86-64-linux-gnu_14.2.0-19 gcc-riscv64-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-1 gettext-base_0.23.1-1 grep_3.11-4 groff-base_1.23.0-7 gzip_1.13-1 help2man_1.49.3 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libapt-pkg7.0_3.0.0 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasan8-riscv64-cross_14.2.0-19cross1 libatomic1_14.2.0-19 libatomic1-riscv64-cross_14.2.0-19cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b2 libbinutils_2.44-3 libblkid1_2.41-4 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libc-bin_2.41-7 libc-dev-bin_2.41-7 libc6_2.41-7 libc6-dev_2.41-7 libc6-dev-riscv64-cross_2.41-6cross2 libc6-riscv64-cross_2.41-6cross2 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-6 libcc1-0_14.2.0-19 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.278 libdebhelper-perl_13.24.2 libdpkg-perl_1.22.18 libelf1t64_0.192-4 libfakeroot_1.37.1.1-1 libfile-stripnondeterminism-perl_1.14.1-2 libgcc-14-dev_14.2.0-19 libgcc-14-dev-riscv64-cross_14.2.0-19cross1 libgcc-s1_14.2.0-19 libgcc-s1-riscv64-cross_14.2.0-19cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp10_2:6.3.0+dfsg-3 libgomp1_14.2.0-19 libgomp1-riscv64-cross_14.2.0-19cross1 libgprofng0_2.44-3 libhogweed6t64_3.10.1-1 libhwasan0_14.2.0-19 libisl23_0.27-1 libitm1_14.2.0-19 libitm1-riscv64-cross_14.2.0-19cross1 libjansson4_2.14-2+b3 liblastlog2-2_2.41-4 liblocale-gettext-perl_1.07-7+b1 liblsan0_14.2.0-19 liblsan0-riscv64-cross_14.2.0-19cross1 liblz4-1_1.10.0-4 liblzma5_5.8.1-1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41-4 libmpc3_1.3.1-1+b3 libmpfr6_4.2.2-1 libnettle8t64_3.10.1-1 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam0g_1.7.0-3 libpcre2-8-0_10.45-1 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Crusoe , Pranav Ballaney Homepage: https://snap.cs.berkeley.edu/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/snap-aligner Vcs-Git: https://salsa.debian.org/med-team/snap-aligner.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev Package-List: snap-aligner deb science optional arch=amd64,arm64,mips64el,ppc64el,s390x,alpha,kfreebsd-amd64,ppc64,riscv64,sparc64,loong64 Checksums-Sha1: 9e63e397151ab04ea3a2c42f486fb1d25afb2c41 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz 631671bcd8f50d0e5e4447797c341b34a0f228f6 7788 snap-aligner_2.0.3+dfsg-2.debian.tar.xz Checksums-Sha256: f340590a4cff3e1f27bfa081123e4dacf61b1514855ae3dc9393b179756faff0 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz e20be3f8a3bc7204ea5ee293462dc2903eaf649eacb723ec4e27d71d405a266e 7788 snap-aligner_2.0.3+dfsg-2.debian.tar.xz Files: 0f41c32b741a1a0d43dfd09256ca2d12 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz fde1efc44134a040d2b715f1ef6623f9 7788 snap-aligner_2.0.3+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWgVLgOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtESZw//TeqeTPoJrTCr0gs5Pwej4NR6xZe4KkAQV3YJ aOE62pXAu0LsfRodNsI4edQEy7Hfjwp7IZOxe9FYmUYeE5j48MKpcM/itikisXDX F6i02De5qryMbij96y/xbqXu3YhTApl810+tY91HcIFrcbyxzcoL+7vcT5bbUL5V qEthVLebUkJDDLcMVUEbOTr1sW7R9RxVKqd8916GqpJOSLnfru0potS57QmdinBb cCbHHu/yvytlWCggbWaWzzibiSiW0Z9UmJYm7o9uK6KBq3+GqCL/luXFoOWeizjF j1hLftvyQAZZiZMGOMAPB0n4PYWZoZSdfpRmMVdo1YNqrv8BxTlxAF9rP1ufDfyL cqi4YpPAAF0AVdv4Fuqlrm78g+I/6AOqxC3yS4/6rcErmxY07dwhnEtHXyGxOuhW xC9/BoWC11uxcIuozA0DB7VgMyEGeIEg9EjZfNDIcx3074RCy6lZ6+3X39288Rrm 9I8fxixYusxpFPQTitMY+EarnR3rc4Yhr3NeAlXgNPg+t6jT6Mg4UWcE3VcMXjhB 4tmqkD+xFL2kYKtl7/kmwqVUDyXEyZAi8CL6i4T5wjUGA0s/Y8zHn4r0DOMIaCEN T4lJUjpf2Uhu7TcDCxvlGyA3zYJsYdfrdZM1+8Fzxc8r7jTHPy7O1e6PEnc6w1QP 6hJWAhg= =bnq5 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./snap-aligner_2.0.3+dfsg-2.dsc: unsupported subcommand dpkg-source: info: extracting snap-aligner in /<> dpkg-source: info: unpacking snap-aligner_2.0.3+dfsg.orig.tar.xz dpkg-source: info: unpacking snap-aligner_2.0.3+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying non-x86-and-kfreebsd dpkg-source: info: applying drop-msse dpkg-source: info: applying simde Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.riscv64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.JWKU20R560/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-20fbeb32-a6cd-4c98-b355-d19d19eda1c1 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ariscv64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package snap-aligner dpkg-buildpackage: info: source version 2.0.3+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type riscv64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' rm -f SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/snap/Main.o apps/snap/stdafx.o tests/AffineGapTest.o tests/AffineGapVectorizedTest.o tests/EventTest.o tests/LandauVishkinTest.o tests/ProbabilityDistanceTest.o tests/TestLib.o tests/main.o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o snap-aligner unit_tests SNAPCommand snap SNAP make[2]: Leaving directory '/<>' rm -f debian/*.1 rm -f */*.d */*/*.d make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=riscv64-linux-gnu-pkg-config CXX=riscv64-linux-gnu-g\+\+ CC=riscv64-linux-gnu-gcc make[2]: Entering directory '/<>' riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AffineGap.o SNAPLib/AffineGap.cpp In file included from SNAPLib/AffineGap.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AffineGapVectorized.o SNAPLib/AffineGapVectorized.cpp In file included from SNAPLib/AffineGapVectorized.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerContext.o SNAPLib/AlignerContext.cpp In file included from SNAPLib/AlignerContext.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerOptions.o SNAPLib/AlignerOptions.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignerOptions.h:29, from SNAPLib/AlignerOptions.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerStats.o SNAPLib/AlignerStats.cpp In file included from SNAPLib/AlignerStats.h:29, from SNAPLib/AlignerStats.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentAdjuster.cpp In file included from SNAPLib/HashTable.h:23, from SNAPLib/GenomeIndex.h:27, from SNAPLib/AlignmentAdjuster.h:27, from SNAPLib/AlignmentAdjuster.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignmentResult.o SNAPLib/AlignmentResult.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/AlignmentResult.cpp:23: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ApproximateCounter.o SNAPLib/ApproximateCounter.cpp In file included from SNAPLib/ApproximateCounter.h:3, from SNAPLib/ApproximateCounter.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Bam.o SNAPLib/Bam.cpp In file included from SNAPLib/SAM.h:22, from SNAPLib/Bam.cpp:20: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BaseAligner.o SNAPLib/BaseAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/BaseAligner.h:30, from SNAPLib/BaseAligner.cpp:29: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BigAlloc.o SNAPLib/BigAlloc.cpp In file included from SNAPLib/BigAlloc.cpp:24: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BufferedAsync.o SNAPLib/BufferedAsync.cpp In file included from SNAPLib/BufferedAsync.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ChimericPairedEndAligner.o SNAPLib/ChimericPairedEndAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/PairedEndAligner.h:25, from SNAPLib/ChimericPairedEndAligner.h:27, from SNAPLib/ChimericPairedEndAligner.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/CommandProcessor.o SNAPLib/CommandProcessor.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/FASTA.h:27, from SNAPLib/CommandProcessor.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Compat.o SNAPLib/Compat.cpp In file included from SNAPLib/Compat.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/DataReader.o SNAPLib/DataReader.cpp In file included from SNAPLib/DataReader.cpp:22: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/DataReader.cpp: In static member function ‘static bool DecompressDataReader::decompress(z_stream*, ThreadHeap*, char*, _int64, _int64*, char*, _int64, _int64*, DecompressMode)’: SNAPLib/DataReader.cpp:2052:53: warning: format ‘%llx’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2052 | fprintf(stderr, "\n0x%llx\t", offset); | ~~~^ ~~~~~~ | | | | | _int64 {aka long int} | long long unsigned int | %lx SNAPLib/DataReader.cpp: In member function ‘char* DecompressDataReader::findPointer(void*)’: SNAPLib/DataReader.cpp:2105:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2105 | sprintf(result, "compressed #%d @ %lld", i, (char*)p - e->compressed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp:2109:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2109 | sprintf(result, "decompressed #%d %lld", i, (char*) p - e->decompressed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp:2113:43: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2113 | sprintf(result, "extra #%d %lld", i, (char*) p - e->decompressed - extraBytes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp: In static member function ‘static void DecompressDataReader::decompressThread(void*)’: SNAPLib/DataReader.cpp:2261:174: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2261 | fprintf(stderr, "Bug in DecompressDataReader::decompressThread(); don't have enough decompress buffer when we thought we'd assured it. Existing size %lld, needed (at least) %lld, entry @0x%p\n", entry->decompressedSize, output, entry); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/DataReader.cpp:2261:198: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2261 | fprintf(stderr, "Bug in DecompressDataReader::decompressThread(); don't have enough decompress buffer when we thought we'd assured it. Existing size %lld, needed (at least) %lld, entry @0x%p\n", entry->decompressedSize, output, entry); | ~~~^ ~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/DataReader.cpp:2265:74: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2265 | fprintf(stderr, "error reading BAM file at offset %lld\n", reader->getFileOffset()); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/DataWriter.o SNAPLib/DataWriter.cpp In file included from SNAPLib/DataWriter.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Error.o SNAPLib/Error.cpp In file included from SNAPLib/Error.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/Error.cpp: In function ‘void WriteProgressCounter(const char*, _int64)’: SNAPLib/Error.cpp:96:49: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 96 | fprintf(stderr,"reporter:counter:SNAP,%s,%lld\n", counterName, increment); | ~~~^ ~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/FASTA.o SNAPLib/FASTA.cpp In file included from SNAPLib/FASTA.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/FASTQ.o SNAPLib/FASTQ.cpp In file included from SNAPLib/FASTQ.h:30, from SNAPLib/FASTQ.cpp:29: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile.o SNAPLib/GenericFile.cpp In file included from SNAPLib/GenericFile.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_Blob.cpp In file included from SNAPLib/GenericFile.h:25, from SNAPLib/GenericFile_Blob.h:26, from SNAPLib/GenericFile_Blob.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_HDFS.cpp riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_map.cpp In file included from SNAPLib/GenericFile.h:25, from SNAPLib/GenericFile_Blob.h:26, from SNAPLib/GenericFile_map.h:26, from SNAPLib/GenericFile_map.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_stdio.o SNAPLib/GenericFile_stdio.cpp In file included from SNAPLib/GenericFile_stdio.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Genome.o SNAPLib/Genome.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/Genome.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/Genome.cpp: In member function ‘bool Genome::saveToFile(const char*) const’: SNAPLib/Genome.cpp:216:26: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘long int’ [-Wformat=] 216 | fprintf(saveFile,"%lld %d %d\n",nBases, nContigs, GENOME_FLAG_ALT_CONTIGS_MARKED); | ~~~^ ~~~~~~ | | | | | long int | long long int | %ld SNAPLib/Genome.cpp:226:31: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 226 | fprintf(saveFile, "%lld %x %d %lld %x %d %d %s %s\n", GenomeLocationAsInt64(contigs[i].beginningLocation), (contigs[i].isALT ? GENOME_FLAG_CONTIG_IS_ALT : 0), OriginalContigNumToInt(contigs[i].originalContigNumber), GenomeLocationAsInt64(contigs[i].projBeginningLocation), | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/Genome.cpp:226:42: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 226 | fprintf(saveFile, "%lld %x %d %lld %x %d %d %s %s\n", GenomeLocationAsInt64(contigs[i].beginningLocation), (contigs[i].isALT ? GENOME_FLAG_CONTIG_IS_ALT : 0), OriginalContigNumToInt(contigs[i].originalContigNumber), GenomeLocationAsInt64(contigs[i].projBeginningLocation), | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/Genome.cpp: In static member function ‘static const Genome* Genome::loadFromFile(const char*, unsigned int, GenomeLocation, GenomeDistance, bool)’: SNAPLib/Genome.cpp:356:47: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 3 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 356 | if (7 != sscanf(contigNameBuffer, "%lld %x %d %lld %x %d %d", &contigStart, &flags, &originalContigNumber, &projContigStart, &altProjRC, &contigNameSize, &cigarLength)) { | ~~~^ ~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/Genome.cpp:356:58: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 6 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 356 | if (7 != sscanf(contigNameBuffer, "%lld %x %d %lld %x %d %d", &contigStart, &flags, &originalContigNumber, &projContigStart, &altProjRC, &contigNameSize, &cigarLength)) { | ~~~^ ~~~~~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/Genome.cpp: In static member function ‘static bool Genome::openFileAndGetSizes(const char*, GenericFile**, GenomeDistance*, unsigned int*, bool)’: SNAPLib/Genome.cpp:497:51: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 3 has type ‘GenomeDistance*’ {aka ‘long int*’} [-Wformat=] 497 | if (NULL == retval || 3 != sscanf(linebuf,"%lld %d %d\n", nBases, nContigs, &flags)) { | ~~~^ ~~~~~~ | | | | | GenomeDistance* {aka long int*} | long long int* | %ld riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenomeIndex.o SNAPLib/GenomeIndex.cpp In file included from SNAPLib/ApproximateCounter.h:3, from SNAPLib/GenomeIndex.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/GenomeIndex.cpp: In static member function ‘static bool GenomeIndex::BuildIndexToDirectory(const Genome*, int, double, const char*, unsigned int, unsigned int, bool, unsigned int, bool, const char*, unsigned int, bool)’: SNAPLib/GenomeIndex.cpp:952:36: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:952:61: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:952:103: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:1007:36: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 1007 | fprintf(indexFile,"%d %d %d %lld %d %d %d %lld %d %d", GenomeIndexFormatMajorVersion, GenomeIndexFormatMinorVersion, index->nHashTables, | ~~~^ | | | long long int | %ld 1008 | index->overflowTableSize, seedLen, chromosomePaddingSize, hashTableKeySize, totalBytesWritten, large ? 0 : 1, locationSize); | ~~~~~~~~~~~~~~~~~~~~~~~~ | | | _uint64 {aka long unsigned int} SNAPLib/GenomeIndex.cpp:1007:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 10 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1007 | fprintf(indexFile,"%d %d %d %lld %d %d %d %lld %d %d", GenomeIndexFormatMajorVersion, GenomeIndexFormatMinorVersion, index->nHashTables, | ~~~^ | | | long long int | %ld 1008 | index->overflowTableSize, seedLen, chromosomePaddingSize, hashTableKeySize, totalBytesWritten, large ? 0 : 1, locationSize); | ~~~~~~~~~~~~~~~~~ | | | size_t {aka long unsigned int} SNAPLib/GenomeIndex.cpp: In static member function ‘static GenomeIndex* GenomeIndex::loadFromDirectory(char*, bool, bool)’: SNAPLib/GenomeIndex.cpp:1879:57: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 6 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 1879 | if (10 != (nRead = sscanf(indexFileBuf,"%d %d %d %lld %d %d %d %lld %d %d", &majorVersion, &minorVersion, &nHashTables, &overflowTableSize, &seedLen, &chromosomePadding, | ~~~^ ~~~~~~~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/GenomeIndex.cpp:1879:71: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 10 has type ‘size_t*’ {aka ‘long unsigned int*’} [-Wformat=] 1879 | if (10 != (nRead = sscanf(indexFileBuf,"%d %d %d %lld %d %d %d %lld %d %d", &majorVersion, &minorVersion, &nHashTables, &overflowTableSize, &seedLen, &chromosomePadding, | ~~~^ | | | long long int* | %ld 1880 | &hashTableKeySize, &hashTablesFileSize, &smallHashTable, &locationSize))) { | ~~~~~~~~~~~~~~~~~~~ | | | size_t* {aka long unsigned int*} riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GzipDataWriter.o SNAPLib/GzipDataWriter.cpp In file included from SNAPLib/GzipDataWriter.h:25, from SNAPLib/GzipDataWriter.cpp:20: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/HashTable.o SNAPLib/HashTable.cpp In file included from SNAPLib/HashTable.h:23, from SNAPLib/HashTable.cpp:20: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Histogram.o SNAPLib/Histogram.cpp In file included from SNAPLib/Histogram.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/HitDepth.o SNAPLib/HitDepth.cpp In file included from SNAPLib/HitDepth.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/IntersectingPairedEndAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/PairedEndAligner.h:25, from SNAPLib/IntersectingPairedEndAligner.h:25, from SNAPLib/IntersectingPairedEndAligner.cpp:24: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/IntersectingPairedEndAligner.h:767:71: warning: non-static data member initializers only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/IntersectingPairedEndAligner.h:767:104: warning: extended initializer lists only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/LandauVishkin.o SNAPLib/LandauVishkin.cpp In file included from SNAPLib/LandauVishkin.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/MultiInputReadSupplier.o SNAPLib/MultiInputReadSupplier.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/MultiInputReadSupplier.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/PairedAligner.o SNAPLib/PairedAligner.cpp In file included from SNAPLib/PairedAligner.cpp:34: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ In file included from SNAPLib/PairedAligner.cpp:47: SNAPLib/IntersectingPairedEndAligner.h:767:71: warning: non-static data member initializers only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/IntersectingPairedEndAligner.h:767:104: warning: extended initializer lists only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/PairedAligner.cpp: In member function ‘void PairedAlignerContext::runIterationThreadImpl(Read**)’: SNAPLib/PairedAligner.cpp:673:72: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘long unsigned int’ [-Wformat=] 673 | fprintf(stderr, "reporter:counter:SNAP,readsAligned,%llu\n", stats->totalReads - readsWhenLastReported); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long unsigned int | %lu riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/PairedReadMatcher.o SNAPLib/PairedReadMatcher.cpp In file included from SNAPLib/PairedReadMatcher.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ParallelTask.o SNAPLib/ParallelTask.cpp In file included from SNAPLib/ParallelTask.h:25, from SNAPLib/ParallelTask.cpp:18: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ProbabilityDistance.o SNAPLib/ProbabilityDistance.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/ProbabilityDistance.h:3, from SNAPLib/ProbabilityDistance.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/RangeSplitter.o SNAPLib/RangeSplitter.cpp In file included from SNAPLib/RangeSplitter.h:29, from SNAPLib/RangeSplitter.cpp:28: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Read.o SNAPLib/Read.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/Read.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadReader.o SNAPLib/ReadReader.cpp In file included from SNAPLib/ReadReader.cpp:19: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/ReadReader.cpp: In member function ‘virtual bool SimpleReadReader::getNextRead(Read*, AlignmentResult*, unsigned int*, bool*, unsigned int*, unsigned int*, const char**)’: SNAPLib/ReadReader.cpp:44:5: warning: no return statement in function returning non-void [-Wreturn-type] 44 | } | ^ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadSupplierQueue.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/ReadSupplierQueue.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadWriter.o SNAPLib/ReadWriter.cpp In file included from SNAPLib/ReadWriter.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SAM.o SNAPLib/SAM.cpp In file included from SNAPLib/SAM.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeHeader(const ReaderContext&, char*, size_t, size_t*, bool, int, const char**, const char*, const char*, bool) const’: SNAPLib/SAM.cpp:1292:116: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 5 has type ‘long int’ [-Wformat=] 1292 | bytesConsumed += snprintf(header + bytesConsumed, headerBufferSize - bytesConsumed, "@SQ\tSN:%s\tLN:%llu%s\n", contig->name, contig->length - context.genome->getChromosomePadding(), contig->isALT ? "\tAH:*":""); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long int | %lu SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writePairs(const ReaderContext&, LandauVishkinWithCigar*, AffineGapVectorizedWithCigar*, bool, char*, size_t, size_t*, size_t*, Read**, GenomeLocation*, PairedAlignmentResult*, bool, bool, char*, bool, int*, int*, bool*, bool*) const’: SNAPLib/SAM.cpp:1854:77: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 1854 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%d\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 1858 | positionInContig[whichRead], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:1854:95: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 1854 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%d\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 1862 | matePositionInContig[whichRead], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeRead(const ReaderContext&, LandauVishkinWithCigar*, char*, size_t, size_t*, size_t, Read*, AlignmentResult, int, GenomeLocation, Direction, bool, bool, int*, int, bool, char*, bool, _int64, int, int, bool, bool, Read*, AlignmentResult, GenomeLocation, Direction, bool, int, int) const’: SNAPLib/SAM.cpp:2076:73: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2080 | positionInContig, | ~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2076:91: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2084 | matePositionInContig, | ~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2076:97: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 13 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long int | %ld ...... 2085 | templateLength, | ~~~~~~~~~~~~~~ | | | _int64 {aka long int} SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeRead(const ReaderContext&, AffineGapVectorizedWithCigar*, char*, size_t, size_t*, size_t, Read*, AlignmentResult, int, GenomeLocation, Direction, bool, bool, int*, int, int, bool, char*, bool, _int64, int, int, bool, bool, Read*, AlignmentResult, GenomeLocation, Direction, bool, int, int) const’: SNAPLib/SAM.cpp:2312:73: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2316 | positionInContig, | ~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2312:91: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2320 | matePositionInContig, | ~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2312:97: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 13 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long int | %ld ...... 2321 | templateLength, | ~~~~~~~~~~~~~~ | | | _int64 {aka long int} SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2650:58: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp:2654:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2745:58: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp:2749:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp: In static member function ‘static void SAMFormat::printRead(const Genome*, Read*, GenomeLocation)’: SNAPLib/SAM.cpp:2820:40: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘GenomeLocation’ {aka ‘long int’} [-Wformat=] 2820 | printf("Aligned location %s:%llu\n", | ~~~^ | | | long long unsigned int | %lu 2821 | genome->getContigAtLocation(location)->name, 2822 | location - genome->getContigAtLocation(location)->beginningLocation); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeLocation {aka long int} SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2650:55: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~ SNAPLib/SAM.cpp:2650:54: note: directive argument in the range [1, 9223372036854775807] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~~~~ In file included from /usr/riscv64-linux-gnu/include/stdio.h:970, from /usr/riscv64-linux-gnu/include/c++/14/cstdio:42, from /usr/riscv64-linux-gnu/include/c++/14/fstream:43, from SNAPLib/stdafx.h:14, from SNAPLib/SAM.cpp:19: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2650:21: /usr/riscv64-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2654:53: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~ SNAPLib/SAM.cpp:2654:52: note: directive argument in the range [1, 9223372036854775807] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2654:21: /usr/riscv64-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2745:55: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~ SNAPLib/SAM.cpp:2745:54: note: directive argument in the range [1, 9223372036854775807] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2745:21: /usr/riscv64-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2749:53: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~ SNAPLib/SAM.cpp:2749:52: note: directive argument in the range [1, 9223372036854775807] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2749:21: /usr/riscv64-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Seed.o SNAPLib/Seed.cpp In file included from SNAPLib/Seed.h:27, from SNAPLib/Seed.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SeedSequencer.o SNAPLib/SeedSequencer.cpp In file included from SNAPLib/Seed.h:27, from SNAPLib/SeedSequencer.h:27, from SNAPLib/SeedSequencer.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SingleAligner.o SNAPLib/SingleAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/BaseAligner.h:30, from SNAPLib/SingleAligner.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/SingleAligner.cpp: In member function ‘virtual void SingleAlignerContext::runIterationThreadImpl(Read*&)’: SNAPLib/SingleAligner.cpp:207:67: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘long unsigned int’ [-Wformat=] 207 | fprintf(stderr,"reporter:counter:SNAP,readsAligned,%llu\n",stats->totalReads - readsWhenLastReported); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long unsigned int | %lu riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SortedDataWriter.o SNAPLib/SortedDataWriter.cpp In file included from SNAPLib/SortedDataWriter.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Tables.o SNAPLib/Tables.cpp riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Util.o SNAPLib/Util.cpp In file included from SNAPLib/Util.h:5, from SNAPLib/Util.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/Util.cpp: In function ‘char* FormatUIntWithCommas(_uint64, char*, size_t, size_t)’: SNAPLib/Util.cpp:167:49: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 167 | sprintf(tempBuf, ",%03lld", x % 1000); | ~~~~~^ ~~~~~~~~ | | | | | _uint64 {aka long unsigned int} | long long int | %03ld SNAPLib/Util.cpp:170:46: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 170 | sprintf(tempBuf, "%lld", x); | ~~~^ ~ | | | | | _uint64 {aka long unsigned int} | long long int | %ld riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/exit.o SNAPLib/exit.cpp In file included from SNAPLib/Error.h:25, from SNAPLib/exit.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/mapq.o SNAPLib/mapq.cpp In file included from SNAPLib/mapq.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/stdafx.o SNAPLib/stdafx.cpp riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/snap/Main.o apps/snap/Main.cpp In file included from SNAPLib/CommandProcessor.h:24, from apps/snap/Main.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/snap/stdafx.o apps/snap/stdafx.cpp riscv64-linux-gnu-g++ -o snap-aligner -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Itests -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/snap/Main.o apps/snap/stdafx.o -lrt -lz riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/AffineGapTest.o tests/AffineGapTest.cpp In file included from SNAPLib/AffineGap.h:3, from tests/AffineGapTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/AffineGapVectorizedTest.o tests/AffineGapVectorizedTest.cpp In file included from SNAPLib/AffineGapVectorized.h:7, from tests/AffineGapVectorizedTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/EventTest.o tests/EventTest.cpp In file included from SNAPLib/LandauVishkin.h:2, from tests/EventTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/LandauVishkinTest.o tests/LandauVishkinTest.cpp In file included from SNAPLib/LandauVishkin.h:2, from tests/LandauVishkinTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/ProbabilityDistanceTest.o tests/ProbabilityDistanceTest.cpp In file included from tests/ProbabilityDistanceTest.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/TestLib.o tests/TestLib.cpp riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/main.o tests/main.cpp riscv64-linux-gnu-g++ -o unit_tests -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Itests -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o tests/AffineGapTest.o tests/AffineGapVectorizedTest.o tests/EventTest.o tests/LandauVishkinTest.o tests/ProbabilityDistanceTest.o tests/TestLib.o tests/main.o -lrt -lz riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/SNAPCommand.cpp In file included from apps/SNAPCommand/SNAPCommand.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ riscv64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/SNAPCommand/stdafx.o apps/SNAPCommand/stdafx.cpp echo SNAPCOMMAND_OBJ is apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o SNAPCOMMAND_OBJ is apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o echo SNAP_OBJ is apps/snap/Main.o apps/snap/stdafx.o SNAP_OBJ is apps/snap/Main.o apps/snap/stdafx.o riscv64-linux-gnu-g++ -o SNAPCommand -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o -lrt -lz make[2]: Leaving directory '/<>' help2man --no-discard-stderr --no-info --version-string="2.0.3" \ --name "scalable nucleotide alignment program" \ --help-option=" " ./snap-aligner > debian/snap-aligner.1 for option in index single paired; do help2man \ --no-discard-stderr --no-info --version-string="2.0.3" \ --include=debian/snap-aligner-${option}-man-include \ --help-option=" " "./snap-aligner ${option}" > \ debian/snap-aligner-${option}.1; done help2man --no-discard-stderr --no-info --version-string="2.0.3" \ --name "scalable nucleotide alignment program" \ --help-option=" " ./SNAPCommand > debian/SNAPCommand.1 make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/snap-aligner/ -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-riscv64-lp64d.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-riscv64-lp64d.so.1.usr-is-merged dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'snap-aligner' in '../snap-aligner_2.0.3+dfsg-2_riscv64.deb'. dpkg-deb: building package 'snap-aligner-dbgsym' in '../snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb'. dpkg-genbuildinfo --build=any -O../snap-aligner_2.0.3+dfsg-2_riscv64.buildinfo dpkg-genchanges --build=any -O../snap-aligner_2.0.3+dfsg-2_riscv64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-04-23T16:32:35Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ ---------------------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ snap-aligner_2.0.3+dfsg-2_riscv64.changes: ------------------------------------------ Format: 1.8 Date: Thu, 11 Jan 2024 21:49:06 +0100 Source: snap-aligner Binary: snap-aligner snap-aligner-dbgsym Built-For-Profiles: cross nocheck Architecture: riscv64 Version: 2.0.3+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: snap-aligner - Scalable Nucleotide Alignment Program Closes: 1050330 1059989 Changes: snap-aligner (2.0.3+dfsg-2) unstable; urgency=medium . * Team upload. * Add loong64 to list of architectures Closes: #1050330, #1059989 Checksums-Sha1: 6ace3342b1284244703d33a2f61fc19f1f6a53e9 2639144 snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb e2c79cd460e9f17fbb3c93d0680d6481c495bffe 5053 snap-aligner_2.0.3+dfsg-2_riscv64.buildinfo 171a2c9fd188ec1dea95593db3d9870b4e813e92 836576 snap-aligner_2.0.3+dfsg-2_riscv64.deb Checksums-Sha256: 2b320eed44a517f925aad407eb384daee75f094910749dac2453bdcc75a9d188 2639144 snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb 04ce6bd3dce3f37c9e53b9fd513324cd9b86331b197796575256909d8258b8d9 5053 snap-aligner_2.0.3+dfsg-2_riscv64.buildinfo b5b34d29fc613a5c14ad454c1be69e7ea81eb6854d2acd82b429547e8fd5b03f 836576 snap-aligner_2.0.3+dfsg-2_riscv64.deb Files: d395acc015b0633599c1f1416fe8a2f0 2639144 debug optional snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb 94e872215f30b7b40c7bba36c0aabe4e 5053 science optional snap-aligner_2.0.3+dfsg-2_riscv64.buildinfo d24891d58211efb8741b8f5ce369d758 836576 science optional snap-aligner_2.0.3+dfsg-2_riscv64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: snap-aligner Binary: snap-aligner snap-aligner-dbgsym Architecture: riscv64 Version: 2.0.3+dfsg-2 Checksums-Md5: d395acc015b0633599c1f1416fe8a2f0 2639144 snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb d24891d58211efb8741b8f5ce369d758 836576 snap-aligner_2.0.3+dfsg-2_riscv64.deb Checksums-Sha1: 6ace3342b1284244703d33a2f61fc19f1f6a53e9 2639144 snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb 171a2c9fd188ec1dea95593db3d9870b4e813e92 836576 snap-aligner_2.0.3+dfsg-2_riscv64.deb Checksums-Sha256: 2b320eed44a517f925aad407eb384daee75f094910749dac2453bdcc75a9d188 2639144 snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb b5b34d29fc613a5c14ad454c1be69e7ea81eb6854d2acd82b429547e8fd5b03f 836576 snap-aligner_2.0.3+dfsg-2_riscv64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 23 Apr 2025 16:32:34 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-1), autotools-dev (= 20240727.1), base-files (= 13.7), base-passwd (= 3.6.7), bash (= 5.2.37-2), binutils (= 2.44-3), binutils-common (= 2.44-3), binutils-x86-64-linux-gnu (= 2.44-3), bsdextrautils (= 2.41-4), bsdutils (= 1:2.41-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.7-2), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-19), cpp-14-x86-64-linux-gnu (= 14.2.0-19), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.24.2), debianutils (= 5.22), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.18), dpkg-dev (= 1.22.18), dwz (= 0.15-1+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-19), g++-14-x86-64-linux-gnu (= 14.2.0-19), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-19), gcc-14-base (= 14.2.0-19), gcc-14-x86-64-linux-gnu (= 14.2.0-19), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-1), gettext-base (= 0.23.1-1), grep (= 3.11-4), groff-base (= 1.23.0-7), gzip (= 1.13-1), help2man (= 1.49.3), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-19), libatomic1 (= 14.2.0-19), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b2), libbinutils (= 2.44-3), libblkid1 (= 2.41-4), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-7), libc-dev-bin (= 2.41-7), libc6 (= 2.41-7), libc6-dev (= 2.41-7), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-6), libcc1-0 (= 14.2.0-19), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-3), libctf0 (= 2.44-3), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.278), libdebhelper-perl (= 13.24.2), libdpkg-perl (= 1.22.18), libelf1t64 (= 0.192-4), libfile-stripnondeterminism-perl (= 1.14.1-2), libgcc-14-dev (= 14.2.0-19), libgcc-s1 (= 14.2.0-19), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp10 (= 2:6.3.0+dfsg-3), libgomp1 (= 14.2.0-19), libgprofng0 (= 2.44-3), libhwasan0 (= 14.2.0-19), libisl23 (= 0.27-1), libitm1 (= 14.2.0-19), libjansson4 (= 2.14-2+b3), liblastlog2-2 (= 2.41-4), liblocale-gettext-perl (= 1.07-7+b1), liblsan0 (= 14.2.0-19), liblzma5 (= 5.8.1-1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41-4), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.2-1), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam0g (= 1.7.0-3), libpcre2-8-0 (= 10.45-1), libperl5.40 (= 5.40.1-3), libpipeline1 (= 1.5.8-1), libquadmath0 (= 14.2.0-19), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libsframe1 (= 2.44-3), libsimde-dev (= 0.8.2-3), libsmartcols1 (= 2.41-4), libsqlite3-0 (= 3.46.1-3), libssl3t64 (= 3.5.0-1), libstdc++-14-dev (= 14.2.0-19), libstdc++6 (= 14.2.0-19), libsystemd0 (= 257.5-2), libtinfo6 (= 6.5+20250216-2), libtool (= 2.5.4-4), libtsan2 (= 14.2.0-19), libubsan1 (= 14.2.0-19), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.5-2), libunistring5 (= 1.3-2), libuuid1 (= 2.41-4), libxml2 (= 2.12.7+dfsg+really2.9.14-0.4), libzstd1 (= 1.5.7+dfsg-1), linux-libc-dev (= 6.12.22-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.0-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), openssl-provider-legacy (= 3.5.0-1), patch (= 2.8-1), perl (= 5.40.1-3), perl-base (= 5.40.1-3), perl-modules-5.40 (= 5.40.1-3), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.25), sysvinit-utils (= 3.14-4), tar (= 1.35+dfsg-3.1), util-linux (= 2.41-4), xz-utils (= 5.8.1-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1705006146" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ snap-aligner-dbgsym_2.0.3+dfsg-2_riscv64.deb -------------------------------------------- new Debian package, version 2.0. size 2639144 bytes: control archive=648 bytes. 444 bytes, 12 lines control 302 bytes, 3 lines md5sums Package: snap-aligner-dbgsym Source: snap-aligner Version: 2.0.3+dfsg-2 Auto-Built-Package: debug-symbols Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 4054 Depends: snap-aligner (= 2.0.3+dfsg-2) Section: debug Priority: optional Description: debug symbols for snap-aligner Build-Ids: f3b8764605daa2f6c082bd40f3c6ecf21b5a6425 fe2f55c5d5522adbec0cdb1bd0b434e7a113c5c3 drwxr-xr-x root/root 0 2024-01-11 20:49 ./ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.build-id/f3/ -rw-r--r-- root/root 1928216 2024-01-11 20:49 ./usr/lib/debug/.build-id/f3/b8764605daa2f6c082bd40f3c6ecf21b5a6425.debug drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.build-id/fe/ -rw-r--r-- root/root 1925600 2024-01-11 20:49 ./usr/lib/debug/.build-id/fe/2f55c5d5522adbec0cdb1bd0b434e7a113c5c3.debug drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.dwz/riscv64-linux-gnu/ -rw-r--r-- root/root 281664 2024-01-11 20:49 ./usr/lib/debug/.dwz/riscv64-linux-gnu/snap-aligner.debug drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner-dbgsym -> snap-aligner snap-aligner_2.0.3+dfsg-2_riscv64.deb ------------------------------------- new Debian package, version 2.0. size 836576 bytes: control archive=1788 bytes. 967 bytes, 18 lines control 2591 bytes, 32 lines md5sums Package: snap-aligner Version: 2.0.3+dfsg-2 Architecture: riscv64 Maintainer: Debian Med Packaging Team Installed-Size: 1765 Depends: libc6 (>= 2.38), libgcc-s1 (>= 4.3), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.3.4) Section: science Priority: optional Homepage: https://snap.cs.berkeley.edu/ Description: Scalable Nucleotide Alignment Program SNAP is a new sequence aligner that is 3-20x faster and just as accurate as existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86 processors, and supports a rich error model that lets it cheaply match reads with more differences from the reference than other tools. This gives SNAP up to 2x lower error rates than existing tools (in some cases) and lets it match larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting, duplicate marking, and BAM indexing. drwxr-xr-x root/root 0 2024-01-11 20:49 ./ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/bin/ -rwxr-xr-x root/root 637544 2024-01-11 20:49 ./usr/bin/SNAPCommand -rwxr-xr-x root/root 633448 2024-01-11 20:49 ./usr/bin/snap-aligner drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc-base/ -rw-r--r-- root/root 815 2024-01-11 20:49 ./usr/share/doc-base/snap-aligner.snap-aligner-manual -rw-r--r-- root/root 833 2024-01-11 20:49 ./usr/share/doc-base/snap-aligner.snap-aligner-quickstart drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/ -rw-r--r-- root/root 103 2023-03-31 03:07 ./usr/share/doc/snap-aligner/NOTICE.txt -rw-r--r-- root/root 78557 2023-03-31 03:07 ./usr/share/doc/snap-aligner/QuickStart.pdf.gz -rw-r--r-- root/root 670 2024-01-11 20:49 ./usr/share/doc/snap-aligner/README.Debian -rw-r--r-- root/root 1631 2023-03-31 03:07 ./usr/share/doc/snap-aligner/README.md -rw-r--r-- root/root 434 2024-01-11 20:49 ./usr/share/doc/snap-aligner/README.test -rw-r--r-- root/root 396913 2023-03-31 03:07 ./usr/share/doc/snap-aligner/SNAP User Manual.pdf.gz -rw-r--r-- root/root 1121 2024-01-11 20:49 ./usr/share/doc/snap-aligner/changelog.Debian.gz -rw-r--r-- root/root 3972 2024-01-11 20:49 ./usr/share/doc/snap-aligner/copyright drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ -rw-r--r-- root/root 592 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-fq-datatest.sam -rw-r--r-- root/root 611 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-fq-datatest2.sam -rw-r--r-- root/root 717 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-sam-datatest.sam -rw-r--r-- root/root 726 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-sam-datatest2.sam -rw-r--r-- root/root 612 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.bam -rw-r--r-- root/root 210 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.fa -rw-r--r-- root/root 426 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.fq -rw-r--r-- root/root 720 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.sam -rw-r--r-- root/root 420 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest2.fa drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest/ -rw-r--r-- root/root 4235 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest/Genome -rw-r--r-- root/root 30 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest/GenomeIndex drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest2/ -rw-r--r-- root/root 6461 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest2/Genome -rw-r--r-- root/root 30 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest2/GenomeIndex -rw-r--r-- root/root 751 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/output.sam -rw-r--r-- root/root 1066 2024-01-11 20:49 ./usr/share/doc/snap-aligner/run-unit-test drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/man/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/man/man1/ -rw-r--r-- root/root 226 2024-01-11 20:49 ./usr/share/man/man1/SNAPCommand.1.gz -rw-r--r-- root/root 246 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner-index.1.gz -rw-r--r-- root/root 247 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner-paired.1.gz -rw-r--r-- root/root 246 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner-single.1.gz -rw-r--r-- root/root 232 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-lintian-dummy has unusual owner or group 1000:119 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1338 B] Get:5 copy:/<>/apt_archive ./ Packages [1421 B] Fetched 3374 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl rng-tools low-memory-monitor gnutls-bin krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libglib2.0-data xdg-user-dirs libgpg-error-l10n libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common liblist-someutils-xs-perl libfreezethaw-perl libgpm2 libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common sbuild-build-depends-lintian-dummy:riscv64 shared-mime-info t1utils ucf unzip 0 upgraded, 174 newly installed, 0 to remove and 0 not upgraded. Need to get 22.6 MB of archives. After this operation, 88.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://localhost:3142/debian unstable/main amd64 netbase all 6.5 [12.4 kB] Get:3 http://localhost:3142/debian unstable/main amd64 libncursesw6 amd64 6.5+20250216-2 [135 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-8 [65.4 kB] Get:5 http://localhost:3142/debian unstable/main amd64 procps amd64 2:4.0.4-8 [881 kB] Get:6 http://localhost:3142/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get:7 http://localhost:3142/debian unstable/main amd64 openssl amd64 3.5.0-1 [1491 kB] Get:8 http://localhost:3142/debian unstable/main amd64 ca-certificates all 20250419 [162 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libtext-charwidth-perl amd64 0.04-11+b4 [9476 B] Get:10 http://localhost:3142/debian unstable/main amd64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:11 http://localhost:3142/debian unstable/main amd64 ucf all 3.0051 [42.8 kB] 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unstable/main amd64 libgpg-error0 amd64 1.51-4 [82.1 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libassuan9 amd64 3.0.2-2 [61.5 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libgcrypt20 amd64 1.11.0-7 [843 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get:47 http://localhost:3142/debian unstable/main amd64 gpgconf amd64 2.4.7-15 [128 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libksba8 amd64 1.6.7-2+b1 [136 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libnpth0t64 amd64 1.8-3 [23.2 kB] Get:50 http://localhost:3142/debian unstable/main amd64 gpg amd64 2.4.7-15 [633 kB] Get:51 http://localhost:3142/debian unstable/main amd64 iso-codes all 4.18.0-1 [3125 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.42 [68.3 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-2 [15.6 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libmodule-runtime-perl all 0.017-1 [17.9 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:62 http://localhost:3142/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libberkeleydb-perl amd64 0.66-1 [121 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:67 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b2 [99.7 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libcgi-pm-perl all 4.68-1 [217 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:71 http://localhost:3142/debian unstable/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:73 http://localhost:3142/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b5 [36.1 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:76 http://localhost:3142/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] Get:77 http://localhost:3142/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:81 http://localhost:3142/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.39-1 [130 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:87 http://localhost:3142/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-2 [32.6 kB] Get:88 http://localhost:3142/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:90 http://localhost:3142/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b5 [98.1 kB] Get:93 http://localhost:3142/debian unstable/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:94 http://localhost:3142/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:95 http://localhost:3142/debian unstable/main amd64 libdevel-size-perl amd64 0.84-1+b1 [24.2 kB] Get:96 http://localhost:3142/debian unstable/main amd64 libemail-address-xs-perl amd64 1.05-1+b4 [29.4 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:98 http://localhost:3142/debian unstable/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:99 http://localhost:3142/debian unstable/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:100 http://localhost:3142/debian unstable/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:101 http://localhost:3142/debian unstable/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:102 http://localhost:3142/debian unstable/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:103 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:104 http://localhost:3142/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:107 http://localhost:3142/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:110 http://localhost:3142/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:111 http://localhost:3142/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:112 http://localhost:3142/debian unstable/main amd64 libhtml-form-perl all 6.12-1 [32.3 kB] Get:113 http://localhost:3142/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:114 http://localhost:3142/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:115 http://localhost:3142/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:116 http://localhost:3142/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:117 http://localhost:3142/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:118 http://localhost:3142/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-3 [339 kB] Get:119 http://localhost:3142/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:120 http://localhost:3142/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:121 http://localhost:3142/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:122 http://localhost:3142/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:123 http://localhost:3142/debian unstable/main amd64 libwww-perl all 6.78-1 [183 kB] Get:124 http://localhost:3142/debian unstable/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:125 http://localhost:3142/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:126 http://localhost:3142/debian unstable/main amd64 libio-interactive-perl all 1.027-1 [11.8 kB] Get:127 http://localhost:3142/debian unstable/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:129 http://localhost:3142/debian unstable/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:130 http://localhost:3142/debian unstable/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:131 http://localhost:3142/debian unstable/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:132 http://localhost:3142/debian unstable/main amd64 liblz1 amd64 1.15-3 [39.0 kB] Get:133 http://localhost:3142/debian unstable/main amd64 liblzo2-2 amd64 2.10-3+b1 [55.1 kB] Get:134 http://localhost:3142/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2.1 [36.0 kB] Get:135 http://localhost:3142/debian unstable/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:136 http://localhost:3142/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:137 http://localhost:3142/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:138 http://localhost:3142/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:139 http://localhost:3142/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:140 http://localhost:3142/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:141 http://localhost:3142/debian unstable/main amd64 libmouse-perl amd64 2.5.11-1+b1 [144 kB] Get:142 http://localhost:3142/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:143 http://localhost:3142/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] Get:144 http://localhost:3142/debian unstable/main amd64 libsub-name-perl amd64 0.28-1 [12.2 kB] Get:145 http://localhost:3142/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:146 http://localhost:3142/debian unstable/main amd64 libpath-tiny-perl all 0.148-1 [56.7 kB] Get:147 http://localhost:3142/debian unstable/main amd64 libperlio-gzip-perl amd64 0.20-1+b4 [17.5 kB] Get:148 http://localhost:3142/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b3 [11.4 kB] Get:149 http://localhost:3142/debian unstable/main amd64 libproc-processtable-perl amd64 0.636-1+b3 [42.3 kB] Get:150 http://localhost:3142/debian unstable/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:151 http://localhost:3142/debian unstable/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b3 [100 kB] Get:152 http://localhost:3142/debian unstable/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b3 [104 kB] Get:153 http://localhost:3142/debian unstable/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:154 http://localhost:3142/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.48-2 [65.7 kB] Get:155 http://localhost:3142/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.30-1+b1 [27.4 kB] Get:156 http://localhost:3142/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB] Get:157 http://localhost:3142/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b4 [8720 B] Get:158 http://localhost:3142/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.18-1 [13.1 kB] Get:159 http://localhost:3142/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-2+b1 [174 kB] Get:160 http://localhost:3142/debian unstable/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:161 http://localhost:3142/debian unstable/main amd64 libtime-moment-perl amd64 0.44-2+b4 [73.2 kB] Get:162 http://localhost:3142/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-3 [20.1 kB] Get:163 http://localhost:3142/debian unstable/main amd64 libwww-mechanize-perl all 2.19-1 [114 kB] Get:164 http://localhost:3142/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:165 http://localhost:3142/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:166 http://localhost:3142/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get:167 http://localhost:3142/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b2 [314 kB] Get:168 http://localhost:3142/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.903.0+ds-1 [35.4 kB] Get:169 http://localhost:3142/debian unstable/main amd64 plzip amd64 1.12-3 [65.0 kB] Get:170 http://localhost:3142/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:171 http://localhost:3142/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:172 http://localhost:3142/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:173 http://localhost:3142/debian unstable/main amd64 unzip amd64 6.0-29 [173 kB] Get:174 http://localhost:3142/debian unstable/main amd64 lintian all 2.122.0 [1063 kB] Preconfiguring packages ... Fetched 22.6 MB in 0s (106 MB/s) Selecting previously unselected package netbase. (Reading database ... 19336 files and directories currently installed.) Preparing to unpack .../000-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package libncursesw6:amd64. Preparing to unpack .../001-libncursesw6_6.5+20250216-2_amd64.deb ... Unpacking libncursesw6:amd64 (6.5+20250216-2) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-8_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-8) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-8_amd64.deb ... Unpacking procps (2:4.0.4-8) ... Selecting previously unselected package readline-common. Preparing to unpack .../004-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.5.0-1_amd64.deb ... Unpacking openssl (3.5.0-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../006-ca-certificates_20250419_all.deb ... Unpacking ca-certificates (20250419) ... Selecting previously unselected package libtext-charwidth-perl:amd64. Preparing to unpack .../007-libtext-charwidth-perl_0.04-11+b4_amd64.deb ... Unpacking libtext-charwidth-perl:amd64 (0.04-11+b4) ... Selecting previously unselected package libtext-wrapi18n-perl. Preparing to unpack .../008-libtext-wrapi18n-perl_0.06-10_all.deb ... Unpacking libtext-wrapi18n-perl (0.06-10) ... Selecting previously unselected package ucf. Preparing to unpack .../009-ucf_3.0051_all.deb ... Moving old data out of the way Unpacking ucf (3.0051) ... Selecting previously unselected package libffi8:amd64. Preparing to unpack .../010-libffi8_3.4.8-1_amd64.deb ... Unpacking libffi8:amd64 (3.4.8-1) ... Selecting previously unselected package libglib2.0-0t64:amd64. 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Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../023-libgssapi-krb5-2_1.21.3-5_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-5) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../024-libsasl2-modules-db_2.1.28+dfsg1-9_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../025-libsasl2-2_2.1.28+dfsg1-9_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libldap2:amd64. Preparing to unpack .../026-libldap2_2.6.9+dfsg-2_amd64.deb ... Unpacking libldap2:amd64 (2.6.9+dfsg-2) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../027-libnghttp2-14_1.64.0-1.1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.64.0-1.1) ... Selecting previously unselected package libnghttp3-9:amd64. 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Unpacking libssh2-1t64:amd64 (1.11.1-1) ... Selecting previously unselected package libcurl3t64-gnutls:amd64. Preparing to unpack .../034-libcurl3t64-gnutls_8.13.0-3_amd64.deb ... Unpacking libcurl3t64-gnutls:amd64 (8.13.0-3) ... Selecting previously unselected package libstemmer0d:amd64. Preparing to unpack .../035-libstemmer0d_2.2.0-4+b2_amd64.deb ... Unpacking libstemmer0d:amd64 (2.2.0-4+b2) ... Selecting previously unselected package libxmlb2:amd64. Preparing to unpack .../036-libxmlb2_0.3.22-1_amd64.deb ... Unpacking libxmlb2:amd64 (0.3.22-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../037-libyaml-0-2_0.2.5-2_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.5-2) ... Selecting previously unselected package libappstream5:amd64. Preparing to unpack .../038-libappstream5_1.0.4-1_amd64.deb ... Unpacking libappstream5:amd64 (1.0.4-1) ... Selecting previously unselected package appstream. 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package gpgconf. Preparing to unpack .../045-gpgconf_2.4.7-15_amd64.deb ... Unpacking gpgconf (2.4.7-15) ... Selecting previously unselected package libksba8:amd64. Preparing to unpack .../046-libksba8_1.6.7-2+b1_amd64.deb ... Unpacking libksba8:amd64 (1.6.7-2+b1) ... Selecting previously unselected package libnpth0t64:amd64. 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Preparing to unpack .../172-lintian_2.122.0_all.deb ... Unpacking lintian (2.122.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:riscv64. Preparing to unpack .../173-sbuild-build-depends-lintian-dummy_0.invalid.0_riscv64.deb ... Unpacking sbuild-build-depends-lintian-dummy:riscv64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.42) ... Setting up liblz1:amd64 (1.15-3) ... Setting up libberkeleydb-perl:amd64 (0.66-1) ... Setting up plzip (1.12-3) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libtext-charwidth-perl:amd64 (0.04-11+b4) ... Setting up libnpth0t64:amd64 (1.8-3) ... Setting up libkeyutils1:amd64 (1.6.3-6) ... Setting up libunicode-utf8-perl (0.62-3) ... Setting up libmouse-perl:amd64 (2.5.11-1+b1) ... Setting up libgpg-error0:amd64 (1.51-4) ... Setting up libdata-messagepack-perl (1.02-2) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-2) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.5-2) ... Setting up libsub-identify-perl (0.14-3+b3) ... Setting up libcpanel-json-xs-perl:amd64 (4.39-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdevel-size-perl (0.84-1+b1) ... Setting up unzip (6.0-29) ... Setting up libbrotli1:amd64 (1.1.0-2+b7) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.903.0+ds-1) ... Setting up libio-interactive-perl (1.027-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libnghttp2-14:amd64 (1.64.0-1.1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libgcrypt20:amd64 (1.11.0-7) ... Setting up liblzo2-2:amd64 (2.10-3+b1) ... Setting up libtime-moment-perl (0.44-2+b4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libidn2-0:amd64 (2.3.8-2) ... Setting up libcom-err2:amd64 (1.47.2-1+b1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1+b3) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up libkrb5support0:amd64 (1.21.3-5) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-9) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004008-1) ... 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Setting up libksba8:amd64 (1.6.7-2+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.18-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-2) ... Setting up ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 150 added, 0 removed; done. Setting up libglib2.0-0t64:amd64 (2.84.1-1) ... No schema files found: doing nothing. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.48-2) ... Setting up shared-mime-info (2.4-5+b2) ... Setting up libp11-kit0:amd64 (0.25.5-3) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-5) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0051) ... Setting up libreadline8t64:amd64 (8.2-6) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.30-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b2) ... Setting up gpgconf (2.4.7-15) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up gpg (2.4.7-15) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhtml-form-perl (6.12-1) ... Setting up libgnutls30t64:amd64 (3.8.9-2) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libxmlb2:amd64 (0.3.22-1) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libcgi-pm-perl (4.68-1) ... Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libmodule-runtime-perl (0.017-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.11.0-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up libcurl3t64-gnutls:amd64 (8.13.0-3) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libappstream5:amd64 (1.0.4-1) ... Setting up appstream (1.0.4-1) ... ✔ Metadata cache was updated successfully. Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.78-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.19-1) ... Setting up lintian (2.122.0) ... Setting up sbuild-build-depends-lintian-dummy:riscv64 (0.invalid.0) ... Processing triggers for libc-bin (2.41-7) ... Processing triggers for man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20250419) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 76 Distribution: unstable Foreign Architectures: riscv64 Host Architecture: riscv64 Install-Time: 10 Job: snap-aligner_2.0.3+dfsg-2 Lintian: pass Machine Architecture: amd64 Package: snap-aligner Package-Time: 98 Source-Version: 2.0.3+dfsg-2 Space: n/a Status: successful Version: 2.0.3+dfsg-2 -------------------------------------------------------------------------------- Finished at 2025-04-23T16:32:35Z Build needed 00:01:38, no disk space