sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | snap-aligner 2.0.3+dfsg-2 (s390x) Sun, 17 Nov 2024 20:09:16 +0000 | +==============================================================================+ Package: snap-aligner Version: 2.0.3+dfsg-2 Source Version: 2.0.3+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: s390x Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-5314fee0-1e66-45e8-bdf1-0d6f0f4d7943' with '<>' I: NOTICE: Log filtering will replace 'build/snap-aligner-NrfMxB/resolver-uJzZTU' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [202 kB] Get:2 http://localhost:3142/debian unstable/main Sources [10.9 MB] Get:3 http://localhost:3142/debian unstable/contrib Sources [62.2 kB] Get:4 http://localhost:3142/debian unstable/non-free-firmware Sources [6824 B] Get:5 http://localhost:3142/debian unstable/non-free Sources [83.7 kB] Get:6 http://localhost:3142/debian unstable/main amd64 Packages [10.0 MB] Get:7 http://localhost:3142/debian unstable/main s390x Packages [9615 kB] Fetched 30.9 MB in 3s (11.5 MB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-passwd bash bsdutils coreutils cpp-14 cpp-14-x86-64-linux-gnu debianutils e2fsprogs g++-14 g++-14-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu gpgv libacl1 libapt-pkg6.0t64 libasan8 libatomic1 libaudit-common libaudit1 libblkid1 libcap-ng0 libcap2 libcc1-0 libcom-err2 libdebconfclient0 libext2fs2t64 libgcc-14-dev libgcc-s1 libgmp10 libgnutls30t64 libgomp1 libhogweed6t64 libhwasan0 libidn2-0 libitm1 libjansson4 liblsan0 liblz4-1 liblzma5 libmd0 libmount1 libmpc3 libmpfr6 libnettle8t64 libp11-kit0 libpam-modules libpam-modules-bin libpam0g libpcre2-8-0 libperl5.40 libquadmath0 libseccomp2 libselinux1 libsemanage2 libsmartcols1 libss2 libssl3t64 libstdc++-14-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan2 libubsan1 libudev1 libunistring5 libuuid1 libxxhash0 libzstd1 linux-libc-dev login login.defs logsave mount ncurses-bin openssl-provider-legacy passwd perl perl-base perl-modules-5.40 sysvinit-utils util-linux xz-utils zlib1g 86 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 94.4 MB of archives. After this operation, 337 kB disk space will be freed. Get:1 http://localhost:3142/debian unstable/main amd64 debianutils amd64 5.21 [92.1 kB] Get:2 http://localhost:3142/debian unstable/main amd64 bash amd64 5.2.32-1+b2 [1500 kB] Get:3 http://localhost:3142/debian unstable/main amd64 bsdutils amd64 1:2.40.2-11 [105 kB] Get:4 http://localhost:3142/debian unstable/main amd64 coreutils amd64 9.5-1+b1 [2922 kB] Get:5 http://localhost:3142/debian unstable/main amd64 ncurses-bin amd64 6.5-2+b1 [434 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libperl5.40 amd64 5.40.0-7 [4324 kB] Get:7 http://localhost:3142/debian unstable/main amd64 perl amd64 5.40.0-7 [267 kB] Get:8 http://localhost:3142/debian unstable/main amd64 perl-base amd64 5.40.0-7 [1675 kB] Get:9 http://localhost:3142/debian unstable/main amd64 perl-modules-5.40 all 5.40.0-7 [3017 kB] Get:10 http://localhost:3142/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libuuid1 amd64 2.40.2-11 [35.9 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libblkid1 amd64 2.40.2-11 [168 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libmount1 amd64 2.40.2-11 [199 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libsmartcols1 amd64 2.40.2-11 [139 kB] Get:15 http://localhost:3142/debian unstable/main amd64 util-linux amd64 2.40.2-11 [1213 kB] Get:16 http://localhost:3142/debian unstable/main amd64 mount amd64 2.40.2-11 [155 kB] Get:17 http://localhost:3142/debian unstable/main amd64 libpcre2-8-0 amd64 10.44-4 [275 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libselinux1 amd64 3.7-3+b1 [77.0 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libcc1-0 amd64 14.2.0-8 [42.8 kB] Get:20 http://localhost:3142/debian unstable/main amd64 gcc-14-base amd64 14.2.0-8 [47.2 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libgcc-s1 amd64 14.2.0-8 [72.7 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libgomp1 amd64 14.2.0-8 [137 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libitm1 amd64 14.2.0-8 [25.9 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libatomic1 amd64 14.2.0-8 [9280 B] Get:25 http://localhost:3142/debian unstable/main amd64 libasan8 amd64 14.2.0-8 [2729 kB] Get:26 http://localhost:3142/debian unstable/main amd64 liblsan0 amd64 14.2.0-8 [1205 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libtsan2 amd64 14.2.0-8 [2461 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libubsan1 amd64 14.2.0-8 [1075 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libhwasan0 amd64 14.2.0-8 [1489 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libquadmath0 amd64 14.2.0-8 [145 kB] Get:31 http://localhost:3142/debian unstable/main amd64 gcc-14 amd64 14.2.0-8 [530 kB] Get:32 http://localhost:3142/debian unstable/main amd64 g++-14 amd64 14.2.0-8 [20.2 kB] Get:33 http://localhost:3142/debian unstable/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8 [12.1 MB] Get:34 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev amd64 14.2.0-8 [2369 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev amd64 14.2.0-8 [2674 kB] Get:36 http://localhost:3142/debian unstable/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8 [21.4 MB] Get:37 http://localhost:3142/debian unstable/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8 [11.1 MB] Get:38 http://localhost:3142/debian unstable/main amd64 cpp-14 amd64 14.2.0-8 [1276 B] Get:39 http://localhost:3142/debian unstable/main amd64 libstdc++6 amd64 14.2.0-8 [714 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2+b2 [560 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libzstd1 amd64 1.5.6+dfsg-1+b1 [300 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libxxhash0 amd64 0.8.2-2+b2 [26.6 kB] Get:45 http://localhost:3142/debian unstable/main amd64 liblz4-1 amd64 1.9.4-3+b1 [60.3 kB] Get:46 http://localhost:3142/debian unstable/main amd64 liblzma5 amd64 5.6.3-1+b1 [272 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libcap2 amd64 1:2.66-5+b1 [27.8 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libsystemd0 amd64 257~rc2-3 [447 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libudev1 amd64 257~rc2-3 [147 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libapt-pkg6.0t64 amd64 2.9.11 [1043 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libdebconfclient0 amd64 0.273 [10.1 kB] Get:52 http://localhost:3142/debian unstable/main amd64 base-passwd amd64 3.6.5 [53.1 kB] Get:53 http://localhost:3142/debian unstable/main amd64 gpgv amd64 2.2.45-2 [219 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libnettle8t64 amd64 3.10-1+b1 [305 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libhogweed6t64 amd64 3.10-1+b1 [335 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.2-1+b1 [429 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-2+b1 [429 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libgnutls30t64 amd64 3.8.8-2 [1454 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libseccomp2 amd64 2.5.5-1+b3 [47.4 kB] Get:62 http://localhost:3142/debian unstable/main amd64 apt amd64 2.9.11 [1362 kB] Get:63 http://localhost:3142/debian unstable/main amd64 sysvinit-utils amd64 3.11-1 [33.1 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libaudit-common all 1:4.0.2-2 [12.7 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libcap-ng0 amd64 0.8.5-3+b1 [17.5 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libaudit1 amd64 1:4.0.2-2 [54.9 kB] Get:67 http://localhost:3142/debian unstable/main amd64 libpam0g amd64 1.5.3-7+b1 [68.3 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libpam-modules-bin amd64 1.5.3-7+b1 [54.1 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libpam-modules amd64 1.5.3-7+b1 [267 kB] Get:70 http://localhost:3142/debian unstable/main amd64 logsave amd64 1.47.1-1+b1 [23.0 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libext2fs2t64 amd64 1.47.1-1+b1 [211 kB] Get:72 http://localhost:3142/debian unstable/main amd64 e2fsprogs amd64 1.47.1-1+b1 [585 kB] Get:73 http://localhost:3142/debian unstable/main amd64 login amd64 1:4.16.0-2+really2.40.2-11 [81.5 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Get:76 http://localhost:3142/debian unstable/main amd64 openssl-provider-legacy amd64 3.3.2-2 [298 kB] Get:77 http://localhost:3142/debian unstable/main amd64 libssl3t64 amd64 3.3.2-2 [2271 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libtinfo6 amd64 6.5-2+b1 [344 kB] Get:79 http://localhost:3142/debian unstable/main amd64 login.defs all 1:4.16.0-5 [185 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libsemanage2 amd64 3.7-2+b1 [91.2 kB] Get:81 http://localhost:3142/debian unstable/main amd64 passwd amd64 1:4.16.0-5 [1232 kB] Get:82 http://localhost:3142/debian unstable/main amd64 xz-utils amd64 5.6.3-1+b1 [542 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libss2 amd64 1.47.1-1+b1 [27.9 kB] Get:86 http://localhost:3142/debian unstable/main amd64 linux-libc-dev all 6.11.7-1 [2454 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 94.4 MB in 1s (184 MB/s) (Reading database ... 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Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Setting up libext2fs2t64:amd64 (1.47.1-1+b1) ... (Reading database ... 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Setting up libmpc3:amd64 (1.3.1-1+b3) ... Setting up libatomic1:amd64 (14.2.0-8) ... Setting up libss2:amd64 (1.47.1-1+b1) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-8) ... Setting up logsave (1.47.1-1+b1) ... Setting up cpp-14 (14.2.0-8) ... Setting up libubsan1:amd64 (14.2.0-8) ... Setting up mount (2.40.2-11) ... Setting up perl-modules-5.40 (5.40.0-7) ... Setting up libhwasan0:amd64 (14.2.0-8) ... Setting up libasan8:amd64 (14.2.0-8) ... Setting up libsemanage2:amd64 (3.7-2+b1) ... Setting up libtsan2:amd64 (14.2.0-8) ... Setting up libcc1-0:amd64 (14.2.0-8) ... Setting up liblsan0:amd64 (14.2.0-8) ... Setting up libitm1:amd64 (14.2.0-8) ... Setting up login (1:4.16.0-2+really2.40.2-11) ... Setting up e2fsprogs (1.47.1-1+b1) ... Setting up libperl5.40:amd64 (5.40.0-7) ... Setting up perl (5.40.0-7) ... Setting up passwd (1:4.16.0-5) ... Setting up libgcc-14-dev:amd64 (14.2.0-8) ... Setting up libstdc++-14-dev:amd64 (14.2.0-8) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-8) ... Setting up gcc-14 (14.2.0-8) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-8) ... Setting up g++-14 (14.2.0-8) ... Processing triggers for debianutils (5.21) ... Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'snap-aligner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/snap-aligner.git Please use: git clone https://salsa.debian.org/med-team/snap-aligner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2033 kB of source archives. Get:1 http://localhost:3142/debian unstable/main snap-aligner 2.0.3+dfsg-2 (dsc) [2281 B] Get:2 http://localhost:3142/debian unstable/main snap-aligner 2.0.3+dfsg-2 (tar) [2023 kB] Get:3 http://localhost:3142/debian unstable/main snap-aligner 2.0.3+dfsg-2 (diff) [7788 B] Fetched 2033 kB in 1s (1522 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/snap-aligner-NrfMxB/snap-aligner-2.0.3+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/snap-aligner-NrfMxB' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x Filtered Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-s390x:amd64, libc-dev:s390x, libstdc++-dev:s390x dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [750 B] Get:5 copy:/<>/apt_archive ./ Packages [793 B] Fetched 2152 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc-14-base:s390x gcc-14-cross-base gcc-14-s390x-linux-gnu gcc-14-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:s390x libgcc-14-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libicu72 libitm1:s390x libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1 libsimde-dev libstdc++-14-dev:s390x libstdc++-14-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml2 linux-libc-dev-s390x-cross m4 man-db po-debconf sensible-utils zlib1g:s390x zlib1g-dev:s390x Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-s390x-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:s390x libc-l10n:s390x locales:s390x libnss-nis:s390x libnss-nisplus:s390x manpages-dev:s390x libstdc++-14-doc:s390x libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:s390x libarchive-cpio-perl libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-s390x-linux-gnu bsdextrautils cpp-14-s390x-linux-gnu cpp-s390x-linux-gnu crossbuild-essential-s390x debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-s390x-linux-gnu g++-s390x-linux-gnu gcc-14-base:s390x gcc-14-cross-base gcc-14-s390x-linux-gnu gcc-14-s390x-linux-gnu-base gcc-s390x-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:s390x libasan8-s390x-cross libatomic1:s390x libatomic1-s390x-cross libc6:s390x libc6-dev:s390x libc6-dev-s390x-cross libc6-s390x-cross libcrypt-dev:s390x libcrypt1:s390x libdebhelper-perl libelf1t64 libfakeroot libfile-stripnondeterminism-perl libgcc-14-dev:s390x libgcc-14-dev-s390x-cross libgcc-s1:s390x libgcc-s1-s390x-cross libgomp1:s390x libgomp1-s390x-cross libicu72 libitm1:s390x libitm1-s390x-cross liblocale-gettext-perl libmagic-mgc libmagic1t64 libpipeline1 libsimde-dev libstdc++-14-dev:s390x libstdc++-14-dev-s390x-cross libstdc++6:s390x libstdc++6-s390x-cross libtool libubsan1:s390x libubsan1-s390x-cross libuchardet0 libxml2 linux-libc-dev-s390x-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:s390x sensible-utils zlib1g:s390x zlib1g-dev:s390x 0 upgraded, 73 newly installed, 0 to remove and 0 not upgraded. Need to get 86.6 MB of archives. After this operation, 346 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:2 http://localhost:3142/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:3 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:4 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:6 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:7 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:8 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:9 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:10 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:12 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:13 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:14 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:15 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:16 http://localhost:3142/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:17 http://localhost:3142/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get:18 http://localhost:3142/debian unstable/main amd64 binutils-s390x-linux-gnu amd64 2.43.1-5 [2502 kB] Get:19 http://localhost:3142/debian unstable/main amd64 gcc-14-s390x-linux-gnu-base amd64 14.2.0-6cross1 [46.9 kB] Get:20 http://localhost:3142/debian unstable/main amd64 cpp-14-s390x-linux-gnu amd64 14.2.0-6cross1 [9404 kB] Get:21 http://localhost:3142/debian unstable/main amd64 cpp-s390x-linux-gnu amd64 4:14.2.0-1 [4848 B] Get:22 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-6cross1 [42.2 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libc6-s390x-cross all 2.40-3cross1 [1139 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libgcc-s1-s390x-cross all 14.2.0-6cross1 [31.9 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libgomp1-s390x-cross all 14.2.0-6cross1 [129 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libitm1-s390x-cross all 14.2.0-6cross1 [26.4 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libatomic1-s390x-cross all 14.2.0-6cross1 [8272 B] Get:28 http://localhost:3142/debian unstable/main amd64 libasan8-s390x-cross all 14.2.0-6cross1 [2564 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libstdc++6-s390x-cross all 14.2.0-6cross1 [715 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libubsan1-s390x-cross all 14.2.0-6cross1 [1055 kB] Get:31 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-s390x-cross all 14.2.0-6cross1 [877 kB] Get:32 http://localhost:3142/debian unstable/main amd64 gcc-14-s390x-linux-gnu amd64 14.2.0-6cross1 [17.8 MB] Get:33 http://localhost:3142/debian unstable/main amd64 gcc-s390x-linux-gnu amd64 4:14.2.0-1 [1448 B] Get:34 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-s390x-cross all 6.11.2-1cross1 [2262 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libc6-dev-s390x-cross all 2.40-3cross1 [1521 kB] Get:36 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-s390x-cross all 14.2.0-6cross1 [2377 kB] Get:37 http://localhost:3142/debian unstable/main amd64 g++-14-s390x-linux-gnu amd64 14.2.0-6cross1 [10.4 MB] Get:38 http://localhost:3142/debian unstable/main amd64 g++-s390x-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:39 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-s390x all 12.12 [3548 B] Get:40 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get:42 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:45 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:46 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:47 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:48 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:50 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:51 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:52 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:53 http://localhost:3142/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:55 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:56 http://localhost:3142/debian unstable/main s390x gcc-14-base s390x 14.2.0-8 [47.2 kB] Get:57 http://localhost:3142/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB] Get:58 http://localhost:3142/debian unstable/main s390x libgcc-s1 s390x 14.2.0-8 [31.9 kB] Get:59 http://localhost:3142/debian unstable/main s390x libc6 s390x 2.40-3 [2410 kB] Get:60 http://localhost:3142/debian unstable/main s390x libasan8 s390x 14.2.0-8 [2570 kB] Get:61 http://localhost:3142/debian unstable/main s390x libatomic1 s390x 14.2.0-8 [8608 B] Get:62 http://localhost:3142/debian unstable/main s390x libcrypt1 s390x 1:4.4.36-5 [93.9 kB] Get:63 http://localhost:3142/debian unstable/main s390x libcrypt-dev s390x 1:4.4.36-5 [122 kB] Get:64 http://localhost:3142/debian unstable/main s390x libc6-dev s390x 2.40-3 [1526 kB] Get:65 http://localhost:3142/debian unstable/main s390x libgomp1 s390x 14.2.0-8 [132 kB] Get:66 http://localhost:3142/debian unstable/main s390x libitm1 s390x 14.2.0-8 [26.9 kB] Get:67 http://localhost:3142/debian unstable/main s390x libstdc++6 s390x 14.2.0-8 [763 kB] Get:68 http://localhost:3142/debian unstable/main s390x libubsan1 s390x 14.2.0-8 [1056 kB] Get:69 http://localhost:3142/debian unstable/main s390x libgcc-14-dev s390x 14.2.0-8 [877 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libsimde-dev all 0.8.2-1 [465 kB] Get:71 http://localhost:3142/debian unstable/main s390x libstdc++-14-dev s390x 14.2.0-8 [2399 kB] Get:72 http://localhost:3142/debian unstable/main s390x zlib1g s390x 1:1.3.dfsg+really1.3.1-1+b1 [86.9 kB] Get:73 http://localhost:3142/debian unstable/main s390x zlib1g-dev s390x 1:1.3.dfsg+really1.3.1-1+b1 [918 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 86.6 MB in 0s (196 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 13028 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-7+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... 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Setting up libicu72:amd64 (72.1-5+b1) ... Setting up binutils-s390x-linux-gnu (2.43.1-5) ... Setting up gcc-14-s390x-linux-gnu-base:amd64 (14.2.0-6cross1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up gcc-14-base:s390x (14.2.0-8) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libc6-s390x-cross (2.40-3cross1) ... Setting up libmagic1t64:amd64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up gcc-14-cross-base (14.2.0-6cross1) ... Setting up file (1:5.45-3+b1) ... Setting up libfakeroot:amd64 (1.36-1) ... Setting up libelf1t64:amd64 (0.192-4) ... Setting up fakeroot (1.36-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up autotools-dev (20220109.1) ... Setting up linux-libc-dev-s390x-cross (6.11.2-1cross1) ... Setting up autopoint (0.22.5-2) ... Setting up libgcc-s1-s390x-cross (14.2.0-6cross1) ... Setting up cpp-14-s390x-linux-gnu (14.2.0-6cross1) ... Setting up autoconf (2.72-3) ... Setting up libitm1-s390x-cross (14.2.0-6cross1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libc6-dev-s390x-cross (2.40-3cross1) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up libgomp1-s390x-cross (14.2.0-6cross1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up cpp-s390x-linux-gnu (4:14.2.0-1) ... Setting up libtool (2.4.7-8) ... Setting up libstdc++6-s390x-cross (14.2.0-6cross1) ... Setting up libatomic1-s390x-cross (14.2.0-6cross1) ... Setting up libasan8-s390x-cross (14.2.0-6cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libubsan1-s390x-cross (14.2.0-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libgcc-14-dev-s390x-cross (14.2.0-6cross1) ... Setting up debhelper (13.20) ... Setting up gcc-14-s390x-linux-gnu (14.2.0-6cross1) ... Setting up gcc-s390x-linux-gnu (4:14.2.0-1) ... Setting up libstdc++-14-dev-s390x-cross (14.2.0-6cross1) ... Setting up g++-14-s390x-linux-gnu (14.2.0-6cross1) ... Setting up g++-s390x-linux-gnu (4:14.2.0-1) ... Setting up crossbuild-essential-s390x (12.12) ... Setting up libgcc-s1:s390x (14.2.0-8) ... Setting up libc6:s390x (2.40-3) ... Setting up libasan8:s390x (14.2.0-8) ... Setting up libstdc++6:s390x (14.2.0-8) ... Setting up libitm1:s390x (14.2.0-8) ... Setting up zlib1g:s390x (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:s390x (1:4.4.36-5) ... Setting up libgomp1:s390x (14.2.0-8) ... Setting up libatomic1:s390x (14.2.0-8) ... Setting up libubsan1:s390x (14.2.0-8) ... Setting up libcrypt-dev:s390x (1:4.4.36-5) ... Setting up libc6-dev:s390x (2.40-3) ... Setting up libgcc-14-dev:s390x (14.2.0-8) ... Setting up libstdc++-14-dev:s390x (14.2.0-8) ... Setting up zlib1g-dev:s390x (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up sbuild-build-depends-main-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in amd64 arm64 mips64el ppc64el s390x alpha kfreebsd-amd64 ppc64 riscv64 sparc64 loong64) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) amd64 (x86_64) Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-3 libstdc++-14-dev_14.2.0-8 libstdc++-14-dev-s390x-cross_14.2.0-6cross1 libstdc++6_14.2.0-8 libstdc++6-s390x-cross_14.2.0-6cross1 linux-libc-dev_6.11.7-1 Package versions: apt_2.9.11 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 autotools-dev_20220109.1 base-files_13.5 base-passwd_3.6.5 bash_5.2.32-1+b2 binutils_2.43.1-5 binutils-common_2.43.1-5 binutils-s390x-linux-gnu_2.43.1-5 binutils-x86-64-linux-gnu_2.43.1-5 bsdextrautils_2.40.2-11 bsdutils_1:2.40.2-11 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-8 cpp-14-s390x-linux-gnu_14.2.0-6cross1 cpp-14-x86-64-linux-gnu_14.2.0-8 cpp-s390x-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-s390x_12.12 dash_0.5.12-9 debconf_1.5.87 debhelper_13.20 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dpkg_1.22.11 dpkg-dev_1.22.11 dwz_0.15-1+b1 e2fsprogs_1.47.1-1+b1 fakeroot_1.36-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-8 g++-14-s390x-linux-gnu_14.2.0-6cross1 g++-14-x86-64-linux-gnu_14.2.0-8 g++-s390x-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-8 gcc-14-base_14.2.0-8 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2.0.3+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Pranav Ballaney Homepage: https://snap.cs.berkeley.edu/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/snap-aligner Vcs-Git: https://salsa.debian.org/med-team/snap-aligner.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), help2man, zlib1g-dev, libsimde-dev Package-List: snap-aligner deb science optional arch=amd64,arm64,mips64el,ppc64el,s390x,alpha,kfreebsd-amd64,ppc64,riscv64,sparc64,loong64 Checksums-Sha1: 9e63e397151ab04ea3a2c42f486fb1d25afb2c41 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz 631671bcd8f50d0e5e4447797c341b34a0f228f6 7788 snap-aligner_2.0.3+dfsg-2.debian.tar.xz Checksums-Sha256: f340590a4cff3e1f27bfa081123e4dacf61b1514855ae3dc9393b179756faff0 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz e20be3f8a3bc7204ea5ee293462dc2903eaf649eacb723ec4e27d71d405a266e 7788 snap-aligner_2.0.3+dfsg-2.debian.tar.xz Files: 0f41c32b741a1a0d43dfd09256ca2d12 2023128 snap-aligner_2.0.3+dfsg.orig.tar.xz fde1efc44134a040d2b715f1ef6623f9 7788 snap-aligner_2.0.3+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWgVLgOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtESZw//TeqeTPoJrTCr0gs5Pwej4NR6xZe4KkAQV3YJ aOE62pXAu0LsfRodNsI4edQEy7Hfjwp7IZOxe9FYmUYeE5j48MKpcM/itikisXDX F6i02De5qryMbij96y/xbqXu3YhTApl810+tY91HcIFrcbyxzcoL+7vcT5bbUL5V qEthVLebUkJDDLcMVUEbOTr1sW7R9RxVKqd8916GqpJOSLnfru0potS57QmdinBb cCbHHu/yvytlWCggbWaWzzibiSiW0Z9UmJYm7o9uK6KBq3+GqCL/luXFoOWeizjF j1hLftvyQAZZiZMGOMAPB0n4PYWZoZSdfpRmMVdo1YNqrv8BxTlxAF9rP1ufDfyL cqi4YpPAAF0AVdv4Fuqlrm78g+I/6AOqxC3yS4/6rcErmxY07dwhnEtHXyGxOuhW xC9/BoWC11uxcIuozA0DB7VgMyEGeIEg9EjZfNDIcx3074RCy6lZ6+3X39288Rrm 9I8fxixYusxpFPQTitMY+EarnR3rc4Yhr3NeAlXgNPg+t6jT6Mg4UWcE3VcMXjhB 4tmqkD+xFL2kYKtl7/kmwqVUDyXEyZAi8CL6i4T5wjUGA0s/Y8zHn4r0DOMIaCEN T4lJUjpf2Uhu7TcDCxvlGyA3zYJsYdfrdZM1+8Fzxc8r7jTHPy7O1e6PEnc6w1QP 6hJWAhg= =bnq5 -----END PGP SIGNATURE----- gpgv: Signature made Thu Jan 11 20:51:04 2024 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./snap-aligner_2.0.3+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting snap-aligner in /<> dpkg-source: info: unpacking snap-aligner_2.0.3+dfsg.orig.tar.xz dpkg-source: info: unpacking snap-aligner_2.0.3+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying non-x86-and-kfreebsd dpkg-source: info: applying drop-msse dpkg-source: info: applying simde Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.s390x DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.eVudG7AsDX/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-5314fee0-1e66-45e8-bdf1-0d6f0f4d7943 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -as390x -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package snap-aligner dpkg-buildpackage: info: source version 2.0.3+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type s390x-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' rm -f SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/snap/Main.o apps/snap/stdafx.o tests/AffineGapTest.o tests/AffineGapVectorizedTest.o tests/EventTest.o tests/LandauVishkinTest.o tests/ProbabilityDistanceTest.o tests/TestLib.o tests/main.o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o snap-aligner unit_tests SNAPCommand snap SNAP make[2]: Leaving directory '/<>' rm -f debian/*.1 rm -f */*.d */*/*.d make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=s390x-linux-gnu-pkg-config CXX=s390x-linux-gnu-g\+\+ CC=s390x-linux-gnu-gcc make[2]: Entering directory '/<>' s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AffineGap.o SNAPLib/AffineGap.cpp In file included from SNAPLib/AffineGap.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AffineGapVectorized.o SNAPLib/AffineGapVectorized.cpp In file included from SNAPLib/AffineGapVectorized.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerContext.o SNAPLib/AlignerContext.cpp In file included from SNAPLib/AlignerContext.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerOptions.o SNAPLib/AlignerOptions.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignerOptions.h:29, from SNAPLib/AlignerOptions.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignerStats.o SNAPLib/AlignerStats.cpp In file included from SNAPLib/AlignerStats.h:29, from SNAPLib/AlignerStats.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentAdjuster.cpp In file included from SNAPLib/HashTable.h:23, from SNAPLib/GenomeIndex.h:27, from SNAPLib/AlignmentAdjuster.h:27, from SNAPLib/AlignmentAdjuster.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/AlignmentResult.o SNAPLib/AlignmentResult.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/AlignmentResult.cpp:23: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ApproximateCounter.o SNAPLib/ApproximateCounter.cpp In file included from SNAPLib/ApproximateCounter.h:3, from SNAPLib/ApproximateCounter.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Bam.o SNAPLib/Bam.cpp In file included from SNAPLib/SAM.h:22, from SNAPLib/Bam.cpp:20: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BaseAligner.o SNAPLib/BaseAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/BaseAligner.h:30, from SNAPLib/BaseAligner.cpp:29: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BigAlloc.o SNAPLib/BigAlloc.cpp In file included from SNAPLib/BigAlloc.cpp:24: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/BufferedAsync.o SNAPLib/BufferedAsync.cpp In file included from SNAPLib/BufferedAsync.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ChimericPairedEndAligner.o SNAPLib/ChimericPairedEndAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/PairedEndAligner.h:25, from SNAPLib/ChimericPairedEndAligner.h:27, from SNAPLib/ChimericPairedEndAligner.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/CommandProcessor.o SNAPLib/CommandProcessor.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/FASTA.h:27, from SNAPLib/CommandProcessor.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Compat.o SNAPLib/Compat.cpp In file included from SNAPLib/Compat.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/DataReader.o SNAPLib/DataReader.cpp In file included from SNAPLib/DataReader.cpp:22: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/DataReader.cpp: In static member function ‘static bool DecompressDataReader::decompress(z_stream*, ThreadHeap*, char*, _int64, _int64*, char*, _int64, _int64*, DecompressMode)’: SNAPLib/DataReader.cpp:2052:53: warning: format ‘%llx’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2052 | fprintf(stderr, "\n0x%llx\t", offset); | ~~~^ ~~~~~~ | | | | | _int64 {aka long int} | long long unsigned int | %lx SNAPLib/DataReader.cpp: In member function ‘char* DecompressDataReader::findPointer(void*)’: SNAPLib/DataReader.cpp:2105:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2105 | sprintf(result, "compressed #%d @ %lld", i, (char*)p - e->compressed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp:2109:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2109 | sprintf(result, "decompressed #%d %lld", i, (char*) p - e->decompressed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp:2113:43: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘long int’ [-Wformat=] 2113 | sprintf(result, "extra #%d %lld", i, (char*) p - e->decompressed - extraBytes); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int long int | %ld SNAPLib/DataReader.cpp: In static member function ‘static void DecompressDataReader::decompressThread(void*)’: SNAPLib/DataReader.cpp:2261:174: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2261 | fprintf(stderr, "Bug in DecompressDataReader::decompressThread(); don't have enough decompress buffer when we thought we'd assured it. Existing size %lld, needed (at least) %lld, entry @0x%p\n", entry->decompressedSize, output, entry); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/DataReader.cpp:2261:198: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2261 | fprintf(stderr, "Bug in DecompressDataReader::decompressThread(); don't have enough decompress buffer when we thought we'd assured it. Existing size %lld, needed (at least) %lld, entry @0x%p\n", entry->decompressedSize, output, entry); | ~~~^ ~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/DataReader.cpp:2265:74: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2265 | fprintf(stderr, "error reading BAM file at offset %lld\n", reader->getFileOffset()); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/DataWriter.o SNAPLib/DataWriter.cpp In file included from SNAPLib/DataWriter.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Error.o SNAPLib/Error.cpp In file included from SNAPLib/Error.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/Error.cpp: In function ‘void WriteProgressCounter(const char*, _int64)’: SNAPLib/Error.cpp:96:49: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 4 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 96 | fprintf(stderr,"reporter:counter:SNAP,%s,%lld\n", counterName, increment); | ~~~^ ~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/FASTA.o SNAPLib/FASTA.cpp In file included from SNAPLib/FASTA.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/FASTQ.o SNAPLib/FASTQ.cpp In file included from SNAPLib/FASTQ.h:30, from SNAPLib/FASTQ.cpp:29: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile.o SNAPLib/GenericFile.cpp In file included from SNAPLib/GenericFile.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_Blob.cpp In file included from SNAPLib/GenericFile.h:25, from SNAPLib/GenericFile_Blob.h:26, from SNAPLib/GenericFile_Blob.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_HDFS.cpp s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_map.cpp In file included from SNAPLib/GenericFile.h:25, from SNAPLib/GenericFile_Blob.h:26, from SNAPLib/GenericFile_map.h:26, from SNAPLib/GenericFile_map.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenericFile_stdio.o SNAPLib/GenericFile_stdio.cpp In file included from SNAPLib/GenericFile_stdio.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Genome.o SNAPLib/Genome.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/Genome.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/Genome.cpp: In member function ‘bool Genome::saveToFile(const char*) const’: SNAPLib/Genome.cpp:216:26: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘long int’ [-Wformat=] 216 | fprintf(saveFile,"%lld %d %d\n",nBases, nContigs, GENOME_FLAG_ALT_CONTIGS_MARKED); | ~~~^ ~~~~~~ | | | | | long int | long long int | %ld SNAPLib/Genome.cpp:226:31: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 226 | fprintf(saveFile, "%lld %x %d %lld %x %d %d %s %s\n", GenomeLocationAsInt64(contigs[i].beginningLocation), (contigs[i].isALT ? GENOME_FLAG_CONTIG_IS_ALT : 0), OriginalContigNumToInt(contigs[i].originalContigNumber), GenomeLocationAsInt64(contigs[i].projBeginningLocation), | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/Genome.cpp:226:42: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 226 | fprintf(saveFile, "%lld %x %d %lld %x %d %d %s %s\n", GenomeLocationAsInt64(contigs[i].beginningLocation), (contigs[i].isALT ? GENOME_FLAG_CONTIG_IS_ALT : 0), OriginalContigNumToInt(contigs[i].originalContigNumber), GenomeLocationAsInt64(contigs[i].projBeginningLocation), | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _int64 {aka long int} | %ld SNAPLib/Genome.cpp: In static member function ‘static const Genome* Genome::loadFromFile(const char*, unsigned int, GenomeLocation, GenomeDistance, bool)’: SNAPLib/Genome.cpp:356:47: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 3 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 356 | if (7 != sscanf(contigNameBuffer, "%lld %x %d %lld %x %d %d", &contigStart, &flags, &originalContigNumber, &projContigStart, &altProjRC, &contigNameSize, &cigarLength)) { | ~~~^ ~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/Genome.cpp:356:58: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 6 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 356 | if (7 != sscanf(contigNameBuffer, "%lld %x %d %lld %x %d %d", &contigStart, &flags, &originalContigNumber, &projContigStart, &altProjRC, &contigNameSize, &cigarLength)) { | ~~~^ ~~~~~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/Genome.cpp: In static member function ‘static bool Genome::openFileAndGetSizes(const char*, GenericFile**, GenomeDistance*, unsigned int*, bool)’: SNAPLib/Genome.cpp:497:51: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 3 has type ‘GenomeDistance*’ {aka ‘long int*’} [-Wformat=] 497 | if (NULL == retval || 3 != sscanf(linebuf,"%lld %d %d\n", nBases, nContigs, &flags)) { | ~~~^ ~~~~~~ | | | | | GenomeDistance* {aka long int*} | long long int* | %ld s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GenomeIndex.o SNAPLib/GenomeIndex.cpp In file included from SNAPLib/ApproximateCounter.h:3, from SNAPLib/GenomeIndex.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/GenomeIndex.cpp: In static member function ‘static bool GenomeIndex::BuildIndexToDirectory(const Genome*, int, double, const char*, unsigned int, unsigned int, bool, unsigned int, bool, const char*, unsigned int, bool)’: SNAPLib/GenomeIndex.cpp:952:36: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:952:61: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:952:103: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 952 | fprintf(histogramFile, "%lld larger than %d with %lld total genome locations, largest seed %lld\n", countOfTooBigForHistogram, maxHistogramEntry, sumOfTooBigForHistogram, largestSeed); | ~~~^ ~~~~~~~~~~~ | | | | long long int _uint64 {aka long unsigned int} | %ld SNAPLib/GenomeIndex.cpp:1007:36: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 1007 | fprintf(indexFile,"%d %d %d %lld %d %d %d %lld %d %d", GenomeIndexFormatMajorVersion, GenomeIndexFormatMinorVersion, index->nHashTables, | ~~~^ | | | long long int | %ld 1008 | index->overflowTableSize, seedLen, chromosomePaddingSize, hashTableKeySize, totalBytesWritten, large ? 0 : 1, locationSize); | ~~~~~~~~~~~~~~~~~~~~~~~~ | | | _uint64 {aka long unsigned int} SNAPLib/GenomeIndex.cpp:1007:50: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 10 has type ‘size_t’ {aka ‘long unsigned int’} [-Wformat=] 1007 | fprintf(indexFile,"%d %d %d %lld %d %d %d %lld %d %d", GenomeIndexFormatMajorVersion, GenomeIndexFormatMinorVersion, index->nHashTables, | ~~~^ | | | long long int | %ld 1008 | index->overflowTableSize, seedLen, chromosomePaddingSize, hashTableKeySize, totalBytesWritten, large ? 0 : 1, locationSize); | ~~~~~~~~~~~~~~~~~ | | | size_t {aka long unsigned int} SNAPLib/GenomeIndex.cpp: In static member function ‘static GenomeIndex* GenomeIndex::loadFromDirectory(char*, bool, bool)’: SNAPLib/GenomeIndex.cpp:1879:57: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 6 has type ‘_int64*’ {aka ‘long int*’} [-Wformat=] 1879 | if (10 != (nRead = sscanf(indexFileBuf,"%d %d %d %lld %d %d %d %lld %d %d", &majorVersion, &minorVersion, &nHashTables, &overflowTableSize, &seedLen, &chromosomePadding, | ~~~^ ~~~~~~~~~~~~~~~~~~ | | | | long long int* _int64* {aka long int*} | %ld SNAPLib/GenomeIndex.cpp:1879:71: warning: format ‘%lld’ expects argument of type ‘long long int*’, but argument 10 has type ‘size_t*’ {aka ‘long unsigned int*’} [-Wformat=] 1879 | if (10 != (nRead = sscanf(indexFileBuf,"%d %d %d %lld %d %d %d %lld %d %d", &majorVersion, &minorVersion, &nHashTables, &overflowTableSize, &seedLen, &chromosomePadding, | ~~~^ | | | long long int* | %ld 1880 | &hashTableKeySize, &hashTablesFileSize, &smallHashTable, &locationSize))) { | ~~~~~~~~~~~~~~~~~~~ | | | size_t* {aka long unsigned int*} s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/GzipDataWriter.o SNAPLib/GzipDataWriter.cpp In file included from SNAPLib/GzipDataWriter.h:25, from SNAPLib/GzipDataWriter.cpp:20: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/HashTable.o SNAPLib/HashTable.cpp In file included from SNAPLib/HashTable.h:23, from SNAPLib/HashTable.cpp:20: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Histogram.o SNAPLib/Histogram.cpp In file included from SNAPLib/Histogram.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/HitDepth.o SNAPLib/HitDepth.cpp In file included from SNAPLib/HitDepth.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/IntersectingPairedEndAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/PairedEndAligner.h:25, from SNAPLib/IntersectingPairedEndAligner.h:25, from SNAPLib/IntersectingPairedEndAligner.cpp:24: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/IntersectingPairedEndAligner.h:767:71: warning: non-static data member initializers only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/IntersectingPairedEndAligner.h:767:104: warning: extended initializer lists only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/LandauVishkin.o SNAPLib/LandauVishkin.cpp In file included from SNAPLib/LandauVishkin.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/MultiInputReadSupplier.o SNAPLib/MultiInputReadSupplier.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/MultiInputReadSupplier.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/PairedAligner.o SNAPLib/PairedAligner.cpp In file included from SNAPLib/PairedAligner.cpp:34: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ In file included from SNAPLib/PairedAligner.cpp:47: SNAPLib/IntersectingPairedEndAligner.h:767:71: warning: non-static data member initializers only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/IntersectingPairedEndAligner.h:767:104: warning: extended initializer lists only available with ‘-std=c++11’ or ‘-std=gnu++11’ [-Wc++11-extensions] 767 | Direction setPairDirection[NUM_SET_PAIRS][NUM_READS_PER_PAIR] = { {FORWARD, RC}, {RC, FORWARD} }; | ^ SNAPLib/PairedAligner.cpp: In member function ‘void PairedAlignerContext::runIterationThreadImpl(Read**)’: SNAPLib/PairedAligner.cpp:673:72: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘long unsigned int’ [-Wformat=] 673 | fprintf(stderr, "reporter:counter:SNAP,readsAligned,%llu\n", stats->totalReads - readsWhenLastReported); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long unsigned int | %lu s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/PairedReadMatcher.o SNAPLib/PairedReadMatcher.cpp In file included from SNAPLib/PairedReadMatcher.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ParallelTask.o SNAPLib/ParallelTask.cpp In file included from SNAPLib/ParallelTask.h:25, from SNAPLib/ParallelTask.cpp:18: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ProbabilityDistance.o SNAPLib/ProbabilityDistance.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/ProbabilityDistance.h:3, from SNAPLib/ProbabilityDistance.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/RangeSplitter.o SNAPLib/RangeSplitter.cpp In file included from SNAPLib/RangeSplitter.h:29, from SNAPLib/RangeSplitter.cpp:28: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Read.o SNAPLib/Read.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/Read.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadReader.o SNAPLib/ReadReader.cpp In file included from SNAPLib/ReadReader.cpp:19: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/ReadReader.cpp: In member function ‘virtual bool SimpleReadReader::getNextRead(Read*, AlignmentResult*, unsigned int*, bool*, unsigned int*, unsigned int*, const char**)’: SNAPLib/ReadReader.cpp:44:5: warning: no return statement in function returning non-void [-Wreturn-type] 44 | } | ^ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadSupplierQueue.cpp In file included from SNAPLib/Read.h:28, from SNAPLib/ReadSupplierQueue.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/ReadWriter.o SNAPLib/ReadWriter.cpp In file included from SNAPLib/ReadWriter.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SAM.o SNAPLib/SAM.cpp In file included from SNAPLib/SAM.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeHeader(const ReaderContext&, char*, size_t, size_t*, bool, int, const char**, const char*, const char*, bool) const’: SNAPLib/SAM.cpp:1292:116: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 5 has type ‘long int’ [-Wformat=] 1292 | bytesConsumed += snprintf(header + bytesConsumed, headerBufferSize - bytesConsumed, "@SQ\tSN:%s\tLN:%llu%s\n", contig->name, contig->length - context.genome->getChromosomePadding(), contig->isALT ? "\tAH:*":""); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long int | %lu SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writePairs(const ReaderContext&, LandauVishkinWithCigar*, AffineGapVectorizedWithCigar*, bool, char*, size_t, size_t*, size_t*, Read**, GenomeLocation*, PairedAlignmentResult*, bool, bool, char*, bool, int*, int*, bool*, bool*) const’: SNAPLib/SAM.cpp:1854:77: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 1854 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%d\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 1858 | positionInContig[whichRead], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:1854:95: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 1854 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%d\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 1862 | matePositionInContig[whichRead], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeRead(const ReaderContext&, LandauVishkinWithCigar*, char*, size_t, size_t*, size_t, Read*, AlignmentResult, int, GenomeLocation, Direction, bool, bool, int*, int, bool, char*, bool, _int64, int, int, bool, bool, Read*, AlignmentResult, GenomeLocation, Direction, bool, int, int) const’: SNAPLib/SAM.cpp:2076:73: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2080 | positionInContig, | ~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2076:91: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2084 | matePositionInContig, | ~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2076:97: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 13 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2076 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long int | %ld ...... 2085 | templateLength, | ~~~~~~~~~~~~~~ | | | _int64 {aka long int} SNAPLib/SAM.cpp: In member function ‘virtual bool SAMFormat::writeRead(const ReaderContext&, AffineGapVectorizedWithCigar*, char*, size_t, size_t*, size_t, Read*, AlignmentResult, int, GenomeLocation, Direction, bool, bool, int*, int, int, bool, char*, bool, _int64, int, int, bool, bool, Read*, AlignmentResult, GenomeLocation, Direction, bool, int, int) const’: SNAPLib/SAM.cpp:2312:73: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 8 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2316 | positionInContig, | ~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2312:91: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 12 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long unsigned int | %lu ...... 2320 | matePositionInContig, | ~~~~~~~~~~~~~~~~~~~~ | | | GenomeDistance {aka long int} SNAPLib/SAM.cpp:2312:97: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 13 has type ‘_int64’ {aka ‘long int’} [-Wformat=] 2312 | int charsInString = snprintf(buffer, bufferSpace, "%.*s\t%d\t%s\t%llu\t%d\t%s\t%s\t%llu\t%lld\t%.*s\t%.*s%s%.*s%s%s\tPG:Z:SNAP%s%.*s%s%s%s%.*s\n", | ~~~^ | | | long long int | %ld ...... 2321 | templateLength, | ~~~~~~~~~~~~~~ | | | _int64 {aka long int} SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2650:58: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp:2654:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2745:58: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp:2749:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 4 has type ‘GenomeDistance’ {aka ‘long int’} [-Wformat=] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int GenomeDistance {aka long int} | %lu SNAPLib/SAM.cpp: In static member function ‘static void SAMFormat::printRead(const Genome*, Read*, GenomeLocation)’: SNAPLib/SAM.cpp:2820:40: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘GenomeLocation’ {aka ‘long int’} [-Wformat=] 2820 | printf("Aligned location %s:%llu\n", | ~~~^ | | | long long unsigned int | %lu 2821 | genome->getContigAtLocation(location)->name, 2822 | location - genome->getContigAtLocation(location)->beginningLocation); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | GenomeLocation {aka long int} SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2650:55: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~ SNAPLib/SAM.cpp:2650:54: note: directive argument in the range [1, 9223372036854775807] 2650 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~~~~ In file included from /usr/s390x-linux-gnu/include/stdio.h:970, from /usr/s390x-linux-gnu/include/c++/14/cstdio:42, from /usr/s390x-linux-gnu/include/c++/14/fstream:43, from SNAPLib/stdafx.h:14, from SNAPLib/SAM.cpp:19: In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2650:21: /usr/s390x-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2654:53: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~ SNAPLib/SAM.cpp:2654:52: note: directive argument in the range [1, 9223372036854775807] 2654 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, LandauVishkinWithCigar*, char*, int, char*, int, const char*, GenomeDistance, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2654:21: /usr/s390x-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2745:55: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~ SNAPLib/SAM.cpp:2745:54: note: directive argument in the range [1, 9223372036854775807] 2745 | snprintf(clipBefore, sizeof(clipBefore), "%lluS", basesClippedBefore + extraBasesClippedBefore); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2745:21: /usr/s390x-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ SNAPLib/SAM.cpp: In static member function ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’: SNAPLib/SAM.cpp:2749:53: warning: ‘%llu’ directive output may be truncated writing between 1 and 19 bytes into a region of size 16 [-Wformat-truncation=] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~ SNAPLib/SAM.cpp:2749:52: note: directive argument in the range [1, 9223372036854775807] 2749 | snprintf(clipAfter, sizeof(clipAfter), "%lluS", basesClippedAfter + extraBasesClippedAfter); | ^~~~~~~ In function ‘int snprintf(char*, size_t, const char*, ...)’, inlined from ‘static const char* SAMFormat::computeCigarString(const Genome*, AffineGapVectorizedWithCigar*, char*, int, char*, int, const char*, const char*, GenomeDistance, int, unsigned int, GenomeDistance, unsigned int, unsigned int, unsigned int, GenomeLocation, Direction, bool, int*, int*, int*)’ at SNAPLib/SAM.cpp:2749:21: /usr/s390x-linux-gnu/include/bits/stdio2.h:68:35: note: ‘__builtin___snprintf_chk’ output between 3 and 21 bytes into a destination of size 16 68 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Seed.o SNAPLib/Seed.cpp In file included from SNAPLib/Seed.h:27, from SNAPLib/Seed.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SeedSequencer.o SNAPLib/SeedSequencer.cpp In file included from SNAPLib/Seed.h:27, from SNAPLib/SeedSequencer.h:27, from SNAPLib/SeedSequencer.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SingleAligner.o SNAPLib/SingleAligner.cpp In file included from SNAPLib/Genome.h:26, from SNAPLib/AlignmentResult.h:29, from SNAPLib/BaseAligner.h:30, from SNAPLib/SingleAligner.cpp:27: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/SingleAligner.cpp: In member function ‘virtual void SingleAlignerContext::runIterationThreadImpl(Read*&)’: SNAPLib/SingleAligner.cpp:207:67: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘long unsigned int’ [-Wformat=] 207 | fprintf(stderr,"reporter:counter:SNAP,readsAligned,%llu\n",stats->totalReads - readsWhenLastReported); | ~~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long long unsigned int long unsigned int | %lu s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/SortedDataWriter.o SNAPLib/SortedDataWriter.cpp In file included from SNAPLib/SortedDataWriter.cpp:21: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Tables.o SNAPLib/Tables.cpp s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/Util.o SNAPLib/Util.cpp In file included from SNAPLib/Util.h:5, from SNAPLib/Util.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ SNAPLib/Util.cpp: In function ‘char* FormatUIntWithCommas(_uint64, char*, size_t, size_t)’: SNAPLib/Util.cpp:167:49: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 167 | sprintf(tempBuf, ",%03lld", x % 1000); | ~~~~~^ ~~~~~~~~ | | | | | _uint64 {aka long unsigned int} | long long int | %03ld SNAPLib/Util.cpp:170:46: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 3 has type ‘_uint64’ {aka ‘long unsigned int’} [-Wformat=] 170 | sprintf(tempBuf, "%lld", x); | ~~~^ ~ | | | | | _uint64 {aka long unsigned int} | long long int | %ld s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/exit.o SNAPLib/exit.cpp In file included from SNAPLib/Error.h:25, from SNAPLib/exit.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/mapq.o SNAPLib/mapq.cpp In file included from SNAPLib/mapq.cpp:25: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o SNAPLib/stdafx.o SNAPLib/stdafx.cpp s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/snap/Main.o apps/snap/Main.cpp In file included from SNAPLib/CommandProcessor.h:24, from apps/snap/Main.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/snap/stdafx.o apps/snap/stdafx.cpp s390x-linux-gnu-g++ -o snap-aligner -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Itests -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/snap/Main.o apps/snap/stdafx.o -lrt -lz s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/AffineGapTest.o tests/AffineGapTest.cpp In file included from SNAPLib/AffineGap.h:3, from tests/AffineGapTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/AffineGapVectorizedTest.o tests/AffineGapVectorizedTest.cpp In file included from SNAPLib/AffineGapVectorized.h:7, from tests/AffineGapVectorizedTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/EventTest.o tests/EventTest.cpp In file included from SNAPLib/LandauVishkin.h:2, from tests/EventTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/LandauVishkinTest.o tests/LandauVishkinTest.cpp In file included from SNAPLib/LandauVishkin.h:2, from tests/LandauVishkinTest.cpp:3: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/ProbabilityDistanceTest.o tests/ProbabilityDistanceTest.cpp In file included from tests/ProbabilityDistanceTest.cpp:2: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/TestLib.o tests/TestLib.cpp s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o tests/main.o tests/main.cpp s390x-linux-gnu-g++ -o unit_tests -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Itests -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o tests/AffineGapTest.o tests/AffineGapVectorizedTest.o tests/EventTest.o tests/LandauVishkinTest.o tests/ProbabilityDistanceTest.o tests/TestLib.o tests/main.o -lrt -lz s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/SNAPCommand.cpp In file included from apps/SNAPCommand/SNAPCommand.cpp:26: SNAPLib/Compat.h:87:11: warning: "_MM_HINT_T0" redefined 87 | # define _MM_HINT_T0 1 | ^~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from SNAPLib/Compat.h:81: /usr/include/simde/x86/sse.h:3486:11: note: this is the location of the previous definition 3486 | #define _MM_HINT_T0 SIMDE_MM_HINT_T0 | ^~~~~~~~~~~ SNAPLib/Compat.h:88:11: warning: "_MM_HINT_T1" redefined 88 | # define _MM_HINT_T1 2 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3488:11: note: this is the location of the previous definition 3488 | #define _MM_HINT_T1 SIMDE_MM_HINT_T1 | ^~~~~~~~~~~ SNAPLib/Compat.h:89:11: warning: "_MM_HINT_T2" redefined 89 | # define _MM_HINT_T2 3 | ^~~~~~~~~~~ /usr/include/simde/x86/sse.h:3490:11: note: this is the location of the previous definition 3490 | #define _MM_HINT_T2 SIMDE_MM_HINT_T2 | ^~~~~~~~~~~ s390x-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wdate-time -D_FORTIFY_SOURCE=2 -c -o apps/SNAPCommand/stdafx.o apps/SNAPCommand/stdafx.cpp echo SNAPCOMMAND_OBJ is apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o SNAPCOMMAND_OBJ is apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o echo SNAP_OBJ is apps/snap/Main.o apps/snap/stdafx.o SNAP_OBJ is apps/snap/Main.o apps/snap/stdafx.o s390x-linux-gnu-g++ -o SNAPCommand -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -std=gnu++98 -O3 -fopenmp-simd -DSIMDE_ENABLE_OPENMP -MMD -ISNAPLib -Wl,-z,relro -Wl,-z,now -pthread SNAPLib/AffineGap.o SNAPLib/AffineGapVectorized.o SNAPLib/AlignerContext.o SNAPLib/AlignerOptions.o SNAPLib/AlignerStats.o SNAPLib/AlignmentAdjuster.o SNAPLib/AlignmentResult.o SNAPLib/ApproximateCounter.o SNAPLib/Bam.o SNAPLib/BaseAligner.o SNAPLib/BigAlloc.o SNAPLib/BufferedAsync.o SNAPLib/ChimericPairedEndAligner.o SNAPLib/CommandProcessor.o SNAPLib/Compat.o SNAPLib/DataReader.o SNAPLib/DataWriter.o SNAPLib/Error.o SNAPLib/FASTA.o SNAPLib/FASTQ.o SNAPLib/GenericFile.o SNAPLib/GenericFile_Blob.o SNAPLib/GenericFile_HDFS.o SNAPLib/GenericFile_map.o SNAPLib/GenericFile_stdio.o SNAPLib/Genome.o SNAPLib/GenomeIndex.o SNAPLib/GzipDataWriter.o SNAPLib/HashTable.o SNAPLib/Histogram.o SNAPLib/HitDepth.o SNAPLib/IntersectingPairedEndAligner.o SNAPLib/LandauVishkin.o SNAPLib/MultiInputReadSupplier.o SNAPLib/PairedAligner.o SNAPLib/PairedReadMatcher.o SNAPLib/ParallelTask.o SNAPLib/ProbabilityDistance.o SNAPLib/RangeSplitter.o SNAPLib/Read.o SNAPLib/ReadReader.o SNAPLib/ReadSupplierQueue.o SNAPLib/ReadWriter.o SNAPLib/SAM.o SNAPLib/Seed.o SNAPLib/SeedSequencer.o SNAPLib/SingleAligner.o SNAPLib/SortedDataWriter.o SNAPLib/Tables.o SNAPLib/Util.o SNAPLib/exit.o SNAPLib/mapq.o SNAPLib/stdafx.o apps/SNAPCommand/SNAPCommand.o apps/SNAPCommand/stdafx.o -lrt -lz make[2]: Leaving directory '/<>' help2man --no-discard-stderr --no-info --version-string="2.0.3" \ --name "scalable nucleotide alignment program" \ --help-option=" " ./snap-aligner > debian/snap-aligner.1 for option in index single paired; do help2man \ --no-discard-stderr --no-info --version-string="2.0.3" \ --include=debian/snap-aligner-${option}-man-include \ --help-option=" " "./snap-aligner ${option}" > \ debian/snap-aligner-${option}.1; done help2man --no-discard-stderr --no-info --version-string="2.0.3" \ --name "scalable nucleotide alignment program" \ --help-option=" " ./SNAPCommand > debian/SNAPCommand.1 make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/snap-aligner/ -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'snap-aligner' in '../snap-aligner_2.0.3+dfsg-2_s390x.deb'. dpkg-deb: building package 'snap-aligner-dbgsym' in '../snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb'. dpkg-genbuildinfo --build=any -O../snap-aligner_2.0.3+dfsg-2_s390x.buildinfo dpkg-genchanges --build=any -O../snap-aligner_2.0.3+dfsg-2_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-11-17T20:11:01Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ snap-aligner_2.0.3+dfsg-2_s390x.changes: ---------------------------------------- Format: 1.8 Date: Thu, 11 Jan 2024 21:49:06 +0100 Source: snap-aligner Binary: snap-aligner snap-aligner-dbgsym Built-For-Profiles: cross nocheck Architecture: s390x Version: 2.0.3+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: snap-aligner - Scalable Nucleotide Alignment Program Closes: 1050330 1059989 Changes: snap-aligner (2.0.3+dfsg-2) unstable; urgency=medium . * Team upload. * Add loong64 to list of architectures Closes: #1050330, #1059989 Checksums-Sha1: 5a670519687d320d45d083154d115be93282fe11 2694920 snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb 67ac1dd9b57e1bba5e359700a4beaf2137607b0a 5102 snap-aligner_2.0.3+dfsg-2_s390x.buildinfo 5787828a7c4fc61c2624ec020eba4b2029732406 849296 snap-aligner_2.0.3+dfsg-2_s390x.deb Checksums-Sha256: 55db2c7074717420ca24456a29c09eef3400aef39f7ce5d9e2d8b83a47a5dbe4 2694920 snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb 7e23eab1c348faadd36d8293c528ad4c35094aac85fa335c50ce4311c1baac6f 5102 snap-aligner_2.0.3+dfsg-2_s390x.buildinfo dc40e09d02b7c8658f9ca521378f4d6429a3961861c21bb7904f06c6562b9a06 849296 snap-aligner_2.0.3+dfsg-2_s390x.deb Files: 27be7fadeae2fa525da435525c94baa4 2694920 debug optional snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb 133b1a19946cf41bf07ca125fce3f23c 5102 science optional snap-aligner_2.0.3+dfsg-2_s390x.buildinfo 11967493c9ab5fb3fba6e7ff9f5ecd01 849296 science optional snap-aligner_2.0.3+dfsg-2_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: snap-aligner Binary: snap-aligner snap-aligner-dbgsym Architecture: s390x Version: 2.0.3+dfsg-2 Checksums-Md5: 27be7fadeae2fa525da435525c94baa4 2694920 snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb 11967493c9ab5fb3fba6e7ff9f5ecd01 849296 snap-aligner_2.0.3+dfsg-2_s390x.deb Checksums-Sha1: 5a670519687d320d45d083154d115be93282fe11 2694920 snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb 5787828a7c4fc61c2624ec020eba4b2029732406 849296 snap-aligner_2.0.3+dfsg-2_s390x.deb Checksums-Sha256: 55db2c7074717420ca24456a29c09eef3400aef39f7ce5d9e2d8b83a47a5dbe4 2694920 snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb dc40e09d02b7c8658f9ca521378f4d6429a3961861c21bb7904f06c6562b9a06 849296 snap-aligner_2.0.3+dfsg-2_s390x.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sun, 17 Nov 2024 20:11:00 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.72-3), automake (= 1:1.16.5-1.3), autopoint (= 0.22.5-2), autotools-dev (= 20220109.1), base-files (= 13.5), base-passwd (= 3.6.5), bash (= 5.2.32-1+b2), binutils (= 2.43.1-5), binutils-common (= 2.43.1-5), binutils-x86-64-linux-gnu (= 2.43.1-5), bsdextrautils (= 2.40.2-11), bsdutils (= 1:2.40.2-11), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.5-1+b1), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-8), cpp-14-x86-64-linux-gnu (= 14.2.0-8), cpp-x86-64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-9), debconf (= 1.5.87), debhelper (= 13.20), debianutils (= 5.21), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.11), dpkg-dev (= 1.22.11), dwz (= 0.15-1+b1), file (= 1:5.45-3+b1), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-8), g++-14-x86-64-linux-gnu (= 14.2.0-8), g++-x86-64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-8), gcc-14-base (= 14.2.0-8), gcc-14-x86-64-linux-gnu (= 14.2.0-8), gcc-x86-64-linux-gnu (= 4:14.2.0-1), gettext (= 0.22.5-2), gettext-base (= 0.22.5-2), grep (= 3.11-4), groff-base (= 1.23.0-5), gzip (= 1.12-1.1), help2man (= 1.49.3), hostname (= 3.25), init-system-helpers (= 1.67), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-8), libatomic1 (= 14.2.0-8), libattr1 (= 1:2.5.2-2), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2), libbinutils (= 2.43.1-5), libblkid1 (= 2.40.2-11), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.40-3), libc-dev-bin (= 2.40-3), libc6 (= 2.40-3), libc6-dev (= 2.40-3), libcap-ng0 (= 0.8.5-3+b1), libcap2 (= 1:2.66-5+b1), libcc1-0 (= 14.2.0-8), libcrypt-dev (= 1:4.4.36-5), libcrypt1 (= 1:4.4.36-5), libctf-nobfd0 (= 2.43.1-5), libctf0 (= 2.43.1-5), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.273), libdebhelper-perl (= 13.20), libdpkg-perl (= 1.22.11), libelf1t64 (= 0.192-4), libfile-stripnondeterminism-perl (= 1.14.0-1), libgcc-14-dev (= 14.2.0-8), libgcc-s1 (= 14.2.0-8), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp10 (= 2:6.3.0+dfsg-2+b2), libgomp1 (= 14.2.0-8), libgprofng0 (= 2.43.1-5), libhwasan0 (= 14.2.0-8), libicu72 (= 72.1-5+b1), libisl23 (= 0.27-1), libitm1 (= 14.2.0-8), libjansson4 (= 2.14-2+b3), liblocale-gettext-perl (= 1.07-7+b1), liblsan0 (= 14.2.0-8), liblzma5 (= 5.6.3-1+b1), libmagic-mgc (= 1:5.45-3+b1), libmagic1t64 (= 1:5.45-3+b1), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.40.2-11), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.1-1+b2), libpam-modules (= 1.5.3-7+b1), libpam-modules-bin (= 1.5.3-7+b1), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7+b1), libpcre2-8-0 (= 10.44-4), libperl5.40 (= 5.40.0-7), libpipeline1 (= 1.5.8-1), libquadmath0 (= 14.2.0-8), libseccomp2 (= 2.5.5-1+b3), libselinux1 (= 3.7-3+b1), libsframe1 (= 2.43.1-5), libsimde-dev (= 0.8.2-1), libsmartcols1 (= 2.40.2-11), libssl3t64 (= 3.3.2-2), libstdc++-14-dev (= 14.2.0-8), libstdc++6 (= 14.2.0-8), libsystemd0 (= 257~rc2-3), libtinfo6 (= 6.5-2+b1), libtool (= 2.4.7-8), libtsan2 (= 14.2.0-8), libubsan1 (= 14.2.0-8), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257~rc2-3), libunistring5 (= 1.2-1+b1), libuuid1 (= 2.40.2-11), libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1), libzstd1 (= 1.5.6+dfsg-1+b1), linux-libc-dev (= 6.11.7-1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.13.0-1), mawk (= 1.3.4.20240905-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2+b1), openssl-provider-legacy (= 3.3.2-2), patch (= 2.7.6-7), perl (= 5.40.0-7), perl-base (= 5.40.0-7), perl-modules-5.40 (= 5.40.0-7), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.24), sysvinit-utils (= 3.11-1), tar (= 1.35+dfsg-3), util-linux (= 2.40.2-11), xz-utils (= 5.6.3-1+b1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1705006146" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ snap-aligner-dbgsym_2.0.3+dfsg-2_s390x.deb ------------------------------------------ new Debian package, version 2.0. size 2694920 bytes: control archive=648 bytes. 442 bytes, 12 lines control 300 bytes, 3 lines md5sums Package: snap-aligner-dbgsym Source: snap-aligner Version: 2.0.3+dfsg-2 Auto-Built-Package: debug-symbols Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 2883 Depends: snap-aligner (= 2.0.3+dfsg-2) Section: debug Priority: optional Description: debug symbols for snap-aligner Build-Ids: 520c992918371cddd77cb774b2cc9e6706f3e23f 6a5dd606a26190e7bb9f6cb53892c55261a8d223 drwxr-xr-x root/root 0 2024-01-11 20:49 ./ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.build-id/52/ -rw-r--r-- root/root 1327640 2024-01-11 20:49 ./usr/lib/debug/.build-id/52/0c992918371cddd77cb774b2cc9e6706f3e23f.debug drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.build-id/6a/ -rw-r--r-- root/root 1326136 2024-01-11 20:49 ./usr/lib/debug/.build-id/6a/5dd606a26190e7bb9f6cb53892c55261a8d223.debug drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/lib/debug/.dwz/s390x-linux-gnu/ -rw-r--r-- root/root 282872 2024-01-11 20:49 ./usr/lib/debug/.dwz/s390x-linux-gnu/snap-aligner.debug drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner-dbgsym -> snap-aligner snap-aligner_2.0.3+dfsg-2_s390x.deb ----------------------------------- new Debian package, version 2.0. size 849296 bytes: control archive=1784 bytes. 965 bytes, 18 lines control 2591 bytes, 32 lines md5sums Package: snap-aligner Version: 2.0.3+dfsg-2 Architecture: s390x Maintainer: Debian Med Packaging Team Installed-Size: 2305 Depends: libc6 (>= 2.38), libgcc-s1 (>= 4.0), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.3.4) Section: science Priority: optional Homepage: https://snap.cs.berkeley.edu/ Description: Scalable Nucleotide Alignment Program SNAP is a new sequence aligner that is 3-20x faster and just as accurate as existing tools like BWA-mem, Bowtie2 and Novoalign. It runs on commodity x86 processors, and supports a rich error model that lets it cheaply match reads with more differences from the reference than other tools. This gives SNAP up to 2x lower error rates than existing tools (in some cases) and lets it match larger mutations that they may miss. SNAP also natively reads BAM, FASTQ, or gzipped FASTQ, and natively writes SAM or BAM, with built-in sorting, duplicate marking, and BAM indexing. drwxr-xr-x root/root 0 2024-01-11 20:49 ./ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/bin/ -rwxr-xr-x root/root 911952 2024-01-11 20:49 ./usr/bin/SNAPCommand -rwxr-xr-x root/root 911952 2024-01-11 20:49 ./usr/bin/snap-aligner drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc-base/ -rw-r--r-- root/root 815 2024-01-11 20:49 ./usr/share/doc-base/snap-aligner.snap-aligner-manual -rw-r--r-- root/root 833 2024-01-11 20:49 ./usr/share/doc-base/snap-aligner.snap-aligner-quickstart drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/ -rw-r--r-- root/root 103 2023-03-31 03:07 ./usr/share/doc/snap-aligner/NOTICE.txt -rw-r--r-- root/root 78557 2023-03-31 03:07 ./usr/share/doc/snap-aligner/QuickStart.pdf.gz -rw-r--r-- root/root 670 2024-01-11 20:49 ./usr/share/doc/snap-aligner/README.Debian -rw-r--r-- root/root 1631 2023-03-31 03:07 ./usr/share/doc/snap-aligner/README.md -rw-r--r-- root/root 434 2024-01-11 20:49 ./usr/share/doc/snap-aligner/README.test -rw-r--r-- root/root 396913 2023-03-31 03:07 ./usr/share/doc/snap-aligner/SNAP User Manual.pdf.gz -rw-r--r-- root/root 1121 2024-01-11 20:49 ./usr/share/doc/snap-aligner/changelog.Debian.gz -rw-r--r-- root/root 3972 2024-01-11 20:49 ./usr/share/doc/snap-aligner/copyright drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ -rw-r--r-- root/root 592 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-fq-datatest.sam -rw-r--r-- root/root 611 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-fq-datatest2.sam -rw-r--r-- root/root 717 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-sam-datatest.sam -rw-r--r-- root/root 726 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/correct-sam-datatest2.sam -rw-r--r-- root/root 612 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.bam -rw-r--r-- root/root 210 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.fa -rw-r--r-- root/root 426 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.fq -rw-r--r-- root/root 720 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest.sam -rw-r--r-- root/root 420 2023-03-31 03:07 ./usr/share/doc/snap-aligner/examples/datatest2.fa drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest/ -rw-r--r-- root/root 4235 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest/Genome -rw-r--r-- root/root 30 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest/GenomeIndex drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest2/ -rw-r--r-- root/root 6461 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest2/Genome -rw-r--r-- root/root 30 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/datatest2/GenomeIndex -rw-r--r-- root/root 751 2024-01-11 20:49 ./usr/share/doc/snap-aligner/examples/ref/output.sam -rw-r--r-- root/root 1066 2024-01-11 20:49 ./usr/share/doc/snap-aligner/run-unit-test drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/man/ drwxr-xr-x root/root 0 2024-01-11 20:49 ./usr/share/man/man1/ -rw-r--r-- root/root 305 2024-01-11 20:49 ./usr/share/man/man1/SNAPCommand.1.gz -rw-r--r-- root/root 318 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner-index.1.gz -rw-r--r-- root/root 319 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner-paired.1.gz -rw-r--r-- root/root 320 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner-single.1.gz -rw-r--r-- root/root 305 2024-01-11 20:49 ./usr/share/man/man1/snap-aligner.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1332 B] Get:5 copy:/<>/apt_archive ./ Packages [1411 B] Fetched 3358 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libglib2.0-0t64 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl low-memory-monitor krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libglib2.0-data xdg-user-dirs libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libglib2.0-0t64 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap-2.5-0 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:s390x shared-mime-info t1utils ucf unzip 0 upgraded, 160 newly installed, 0 to remove and 0 not upgraded. Need to get 18.8 MB of archives. After this operation, 75.2 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://localhost:3142/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get:4 http://localhost:3142/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get:5 http://localhost:3142/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get:6 http://localhost:3142/debian unstable/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:7 http://localhost:3142/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1501 kB] Get:8 http://localhost:3142/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get:9 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:11 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:13 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:16 http://localhost:3142/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:17 http://localhost:3142/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libnghttp3-9 amd64 1.4.0-1+b1 [63.6 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get:22 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:23 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.11.0-1 [359 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libstemmer0d amd64 2.2.0-4+b2 [119 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libxmlb2 amd64 0.3.21-1 [63.0 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get:29 http://localhost:3142/debian unstable/main amd64 libappstream5 amd64 1.0.3-1+b1 [224 kB] Get:30 http://localhost:3142/debian unstable/main amd64 appstream amd64 1.0.3-1+b1 [469 kB] Get:31 http://localhost:3142/debian unstable/main amd64 diffstat amd64 1.66-1 [34.0 kB] Get:32 http://localhost:3142/debian unstable/main amd64 libassuan9 amd64 3.0.1-2 [60.6 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:34 http://localhost:3142/debian unstable/main amd64 gpgconf amd64 2.2.45-2 [120 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:36 http://localhost:3142/debian unstable/main amd64 gpg amd64 2.2.45-2 [531 kB] Get:37 http://localhost:3142/debian unstable/main amd64 iso-codes all 4.17.0-1 [3055 kB] Get:38 http://localhost:3142/debian unstable/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40+b6 [67.8 kB] Get:40 http://localhost:3142/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-3+b2 [10.6 kB] Get:41 http://localhost:3142/debian unstable/main amd64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.009-1+b1 [16.2 kB] Get:43 http://localhost:3142/debian unstable/main amd64 libparams-classify-perl amd64 0.015-2+b4 [22.5 kB] Get:44 http://localhost:3142/debian unstable/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:45 http://localhost:3142/debian unstable/main amd64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:46 http://localhost:3142/debian unstable/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:47 http://localhost:3142/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:48 http://localhost:3142/debian unstable/main amd64 libvariable-magic-perl amd64 0.64-1+b1 [44.9 kB] Get:49 http://localhost:3142/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:50 http://localhost:3142/debian unstable/main amd64 libberkeleydb-perl amd64 0.66-1 [121 kB] Get:51 http://localhost:3142/debian unstable/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:53 http://localhost:3142/debian unstable/main amd64 liburi-perl all 5.30-1 [105 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libhtml-parser-perl amd64 3.83-1+b1 [99.7 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libcgi-pm-perl all 4.66-1 [217 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:57 http://localhost:3142/debian unstable/main amd64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b4 [36.1 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libclone-perl amd64 0.47-1+b1 [13.9 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libparams-util-perl amd64 1.102-3+b1 [24.4 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:67 http://localhost:3142/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.38-1+b1 [129 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:69 http://localhost:3142/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:73 http://localhost:3142/debian unstable/main amd64 libdata-messagepack-perl amd64 1.02-1+b4 [32.8 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:76 http://localhost:3142/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:77 http://localhost:3142/debian unstable/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:78 http://localhost:3142/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b4 [98.1 kB] Get:79 http://localhost:3142/debian unstable/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:81 http://localhost:3142/debian unstable/main amd64 libdevel-size-perl amd64 0.84-1+b1 [24.2 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libemail-address-xs-perl amd64 1.05-1+b4 [29.4 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libnumber-compare-perl all 0.03-3 [6332 B] Get:87 http://localhost:3142/debian unstable/main amd64 libtext-glob-perl all 0.11-3 [7676 B] Get:88 http://localhost:3142/debian unstable/main amd64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:90 http://localhost:3142/debian unstable/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:93 http://localhost:3142/debian unstable/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:94 http://localhost:3142/debian unstable/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:95 http://localhost:3142/debian unstable/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:96 http://localhost:3142/debian unstable/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:98 http://localhost:3142/debian unstable/main amd64 libhtml-form-perl all 6.12-1 [32.3 kB] Get:99 http://localhost:3142/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:100 http://localhost:3142/debian unstable/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:101 http://localhost:3142/debian unstable/main amd64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:102 http://localhost:3142/debian unstable/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:103 http://localhost:3142/debian unstable/main amd64 perl-openssl-defaults amd64 7+b2 [6724 B] Get:104 http://localhost:3142/debian unstable/main amd64 libnet-ssleay-perl amd64 1.94-2 [339 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:106 http://localhost:3142/debian unstable/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:107 http://localhost:3142/debian unstable/main amd64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:108 http://localhost:3142/debian unstable/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:109 http://localhost:3142/debian unstable/main amd64 libwww-perl all 6.77-1 [183 kB] Get:110 http://localhost:3142/debian unstable/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:111 http://localhost:3142/debian unstable/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:112 http://localhost:3142/debian unstable/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:113 http://localhost:3142/debian unstable/main amd64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:114 http://localhost:3142/debian unstable/main amd64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:115 http://localhost:3142/debian unstable/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:116 http://localhost:3142/debian unstable/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:117 http://localhost:3142/debian unstable/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:118 http://localhost:3142/debian unstable/main amd64 liblz1 amd64 1.15~pre2-1 [39.2 kB] Get:119 http://localhost:3142/debian unstable/main amd64 liblzo2-2 amd64 2.10-3+b1 [55.1 kB] Get:120 http://localhost:3142/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2.1 [36.0 kB] Get:121 http://localhost:3142/debian unstable/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:122 http://localhost:3142/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:123 http://localhost:3142/debian unstable/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:124 http://localhost:3142/debian unstable/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:125 http://localhost:3142/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:126 http://localhost:3142/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:127 http://localhost:3142/debian unstable/main amd64 libmouse-perl amd64 2.5.11-1+b1 [144 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:129 http://localhost:3142/debian unstable/main amd64 libsub-identify-perl amd64 0.14-3+b3 [11.3 kB] Get:130 http://localhost:3142/debian unstable/main amd64 libsub-name-perl amd64 0.27-1+b3 [12.5 kB] Get:131 http://localhost:3142/debian unstable/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:132 http://localhost:3142/debian unstable/main amd64 libpath-tiny-perl all 0.146-1 [56.2 kB] Get:133 http://localhost:3142/debian unstable/main amd64 libperlio-gzip-perl amd64 0.20-1+b4 [17.5 kB] Get:134 http://localhost:3142/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.010-1+b3 [11.4 kB] Get:135 http://localhost:3142/debian unstable/main amd64 libproc-processtable-perl amd64 0.636-1+b3 [42.3 kB] Get:136 http://localhost:3142/debian unstable/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:137 http://localhost:3142/debian unstable/main amd64 libsereal-decoder-perl amd64 5.004+ds-1+b3 [100 kB] Get:138 http://localhost:3142/debian unstable/main amd64 libsereal-encoder-perl amd64 5.004+ds-1+b3 [104 kB] Get:139 http://localhost:3142/debian unstable/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:140 http://localhost:3142/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.46-1+b1 [64.9 kB] Get:141 http://localhost:3142/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.30-1+b1 [27.4 kB] Get:142 http://localhost:3142/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-2+b4 [24.6 kB] Get:143 http://localhost:3142/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b4 [8720 B] Get:144 http://localhost:3142/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.16-1+b3 [13.0 kB] Get:145 http://localhost:3142/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-2+b1 [174 kB] Get:146 http://localhost:3142/debian unstable/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:147 http://localhost:3142/debian unstable/main amd64 libtime-moment-perl amd64 0.44-2+b4 [73.2 kB] Get:148 http://localhost:3142/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-2+b3 [20.4 kB] Get:149 http://localhost:3142/debian unstable/main amd64 libwww-mechanize-perl all 2.19-1 [114 kB] Get:150 http://localhost:3142/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:151 http://localhost:3142/debian unstable/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:152 http://localhost:3142/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:153 http://localhost:3142/debian unstable/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-5+b1 [314 kB] Get:154 http://localhost:3142/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.902.0+ds-2+b1 [35.5 kB] Get:155 http://localhost:3142/debian unstable/main amd64 plzip amd64 1.11-2 [63.6 kB] Get:156 http://localhost:3142/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:157 http://localhost:3142/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:158 http://localhost:3142/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:159 http://localhost:3142/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] Get:160 http://localhost:3142/debian unstable/main amd64 lintian all 2.120.0 [1058 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 18.8 MB in 0s (69.4 MB/s) Selecting previously unselected package netbase. (Reading database ... 19204 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package ucf. Preparing to unpack .../004-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package libglib2.0-0t64:amd64. Preparing to unpack .../005-libglib2.0-0t64_2.82.2-3_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.82.2-3) ... 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Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../012-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../013-libsasl2-modules-db_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../014-libsasl2-2_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../015-libldap-2.5-0_2.5.18+dfsg-3+b1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../016-libnghttp2-14_1.64.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.64.0-1) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../017-libnghttp3-9_1.4.0-1+b1_amd64.deb ... Unpacking libnghttp3-9:amd64 (1.4.0-1+b1) ... Selecting previously unselected package libngtcp2-16:amd64. Preparing to unpack .../018-libngtcp2-16_1.6.0-1_amd64.deb ... Unpacking libngtcp2-16:amd64 (1.6.0-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:amd64. Preparing to unpack .../019-libngtcp2-crypto-gnutls8_1.6.0-1_amd64.deb ... Unpacking libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../020-libpsl5t64_0.21.2-1.1+b1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1+b1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../021-librtmp1_2.4+20151223.gitfa8646d.1-2+b5_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Selecting previously unselected package libssh2-1t64:amd64. 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Selecting previously unselected package appstream. Preparing to unpack .../028-appstream_1.0.3-1+b1_amd64.deb ... Unpacking appstream (1.0.3-1+b1) ... Selecting previously unselected package diffstat. Preparing to unpack .../029-diffstat_1.66-1_amd64.deb ... Unpacking diffstat (1.66-1) ... Selecting previously unselected package libassuan9:amd64. Preparing to unpack .../030-libassuan9_3.0.1-2_amd64.deb ... Unpacking libassuan9:amd64 (3.0.1-2) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../031-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../032-gpgconf_2.2.45-2_amd64.deb ... Unpacking gpgconf (2.2.45-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../033-libsqlite3-0_3.46.1-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.46.1-1) ... Selecting previously unselected package gpg. 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Selecting previously unselected package libdevel-callchecker-perl:amd64. Preparing to unpack .../040-libdevel-callchecker-perl_0.009-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Selecting previously unselected package libparams-classify-perl:amd64. Preparing to unpack .../041-libparams-classify-perl_0.015-2+b4_amd64.deb ... Unpacking libparams-classify-perl:amd64 (0.015-2+b4) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../042-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../043-libtry-tiny-perl_0.32-1_all.deb ... Unpacking libtry-tiny-perl (0.32-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../044-libmodule-implementation-perl_0.09-2_all.deb ... Unpacking libmodule-implementation-perl (0.09-2) ... 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Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../066-libdevel-stacktrace-perl_2.0500-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0500-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../067-libexception-class-perl_1.45-1_all.deb ... Unpacking libexception-class-perl (1.45-1) ... Selecting previously unselected package libiterator-perl. Preparing to unpack .../068-libiterator-perl_0.03+ds1-2_all.deb ... Unpacking libiterator-perl (0.03+ds1-2) ... Selecting previously unselected package libiterator-util-perl. Preparing to unpack .../069-libiterator-util-perl_0.02+ds1-2_all.deb ... Unpacking libiterator-util-perl (0.02+ds1-2) ... Selecting previously unselected package libdata-dpath-perl. Preparing to unpack .../070-libdata-dpath-perl_0.60-1_all.deb ... Unpacking libdata-dpath-perl (0.60-1) ... Selecting previously unselected package libdata-messagepack-perl. 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Selecting previously unselected package libperlio-utf8-strict-perl. Preparing to unpack .../132-libperlio-utf8-strict-perl_0.010-1+b3_amd64.deb ... Unpacking libperlio-utf8-strict-perl (0.010-1+b3) ... Selecting previously unselected package libproc-processtable-perl:amd64. Preparing to unpack .../133-libproc-processtable-perl_0.636-1+b3_amd64.deb ... Unpacking libproc-processtable-perl:amd64 (0.636-1+b3) ... Selecting previously unselected package libregexp-wildcards-perl. Preparing to unpack .../134-libregexp-wildcards-perl_1.05-3_all.deb ... Unpacking libregexp-wildcards-perl (1.05-3) ... Selecting previously unselected package libsereal-decoder-perl. Preparing to unpack .../135-libsereal-decoder-perl_5.004+ds-1+b3_amd64.deb ... Unpacking libsereal-decoder-perl (5.004+ds-1+b3) ... Selecting previously unselected package libsereal-encoder-perl. Preparing to unpack .../136-libsereal-encoder-perl_5.004+ds-1+b3_amd64.deb ... Unpacking libsereal-encoder-perl (5.004+ds-1+b3) ... Selecting previously unselected package libsort-versions-perl. Preparing to unpack .../137-libsort-versions-perl_1.62-3_all.deb ... Unpacking libsort-versions-perl (1.62-3) ... Selecting previously unselected package libxs-parse-keyword-perl. Preparing to unpack .../138-libxs-parse-keyword-perl_0.46-1+b1_amd64.deb ... Unpacking libxs-parse-keyword-perl (0.46-1+b1) ... Selecting previously unselected package libsyntax-keyword-try-perl. Preparing to unpack .../139-libsyntax-keyword-try-perl_0.30-1+b1_amd64.deb ... Unpacking libsyntax-keyword-try-perl (0.30-1+b1) ... Selecting previously unselected package libterm-readkey-perl. Preparing to unpack .../140-libterm-readkey-perl_2.38-2+b4_amd64.deb ... Unpacking libterm-readkey-perl (2.38-2+b4) ... Selecting previously unselected package libtext-levenshteinxs-perl. Preparing to unpack .../141-libtext-levenshteinxs-perl_0.03-5+b4_amd64.deb ... Unpacking libtext-levenshteinxs-perl (0.03-5+b4) ... 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Selecting previously unselected package sbuild-build-depends-lintian-dummy:s390x. Preparing to unpack .../159-sbuild-build-depends-lintian-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b6) ... Setting up liblz1:amd64 (1.15~pre2-1) ... Setting up libberkeleydb-perl:amd64 (0.66-1) ... Setting up plzip (1.11-2) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libkeyutils1:amd64 (1.6.3-4) ... Setting up libunicode-utf8-perl (0.62-2+b3) ... Setting up libmouse-perl:amd64 (2.5.11-1+b1) ... Setting up libdata-messagepack-perl (1.02-1+b4) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.47-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.5-1+b2) ... Setting up libsub-identify-perl (0.14-3+b3) ... Setting up libcpanel-json-xs-perl:amd64 (4.38-1+b1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdevel-size-perl (0.84-1+b1) ... Setting up unzip (6.0-28) ... Setting up libbrotli1:amd64 (1.1.0-2+b6) ... Setting up libsqlite3-0:amd64 (3.46.1-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.902.0+ds-2+b1) ... Setting up libio-interactive-perl (1.025-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libnghttp2-14:amd64 (1.64.0-1) ... Setting up perl-openssl-defaults:amd64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... 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Setting up openssl (3.3.2-2) ... Setting up libtext-levenshteinxs-perl (0.03-5+b4) ... Setting up libperlio-gzip-perl (0.20-1+b4) ... Setting up readline-common (8.2-5) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b3) ... Setting up libmarkdown2:amd64 (2.2.7-2.1) ... Setting up liburi-perl (5.30-1) ... Setting up iso-codes (4.17.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b4) ... Setting up libnet-ssleay-perl:amd64 (1.94-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libxmlb2:amd64 (0.3.21-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1+b3) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.009-1+b1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.46-1+b1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.30-1+b1) ... Setting up libhtml-parser-perl:amd64 (3.83-1+b1) ... Setting up gpgconf (2.2.45-2) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up gpg (2.2.45-2) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhtml-form-perl (6.12-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b4) ... Setting up libcgi-pm-perl (4.66-1) ... Setting up libcurl3t64-gnutls:amd64 (8.11.0-1) ... Setting up libappstream5:amd64 (1.0.3-1+b1) ... Setting up appstream (1.0.3-1+b1) ... ✔ Metadata cache was updated successfully. Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.19-1) ... Setting up lintian (2.120.0) ... Setting up sbuild-build-depends-lintian-dummy:s390x (0.invalid.0) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 48900 Build-Time: 77 Distribution: unstable Foreign Architectures: s390x Host Architecture: s390x Install-Time: 8 Job: snap-aligner_2.0.3+dfsg-2 Lintian: pass Machine Architecture: amd64 Package: snap-aligner Package-Time: 105 Source-Version: 2.0.3+dfsg-2 Space: 48900 Status: successful Version: 2.0.3+dfsg-2 -------------------------------------------------------------------------------- Finished at 2024-11-17T20:11:01Z Build needed 00:01:45, 48900k disk space