sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | soapdenovo2 242+dfsg-3 (amd64) Wed, 27 Sep 2023 00:23:18 +0000 | +==============================================================================+ Package: soapdenovo2 Version: 242+dfsg-3 Source Version: 242+dfsg-3 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.7rjzZBkKBH... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/soapdenovo2-0SynbF/resolver-XDS24G' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [195 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.2 MB] Get:3 http://mirror.einval.org/debian unstable/main amd64 Packages [9504 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 Packages [9380 kB] Fetched 29.3 MB in 7s (3926 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'soapdenovo2' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/soapdenovo2.git Please use: git clone https://salsa.debian.org/med-team/soapdenovo2.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 741 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main soapdenovo2 242+dfsg-3 (dsc) [2159 B] Get:2 http://mirror.einval.org/debian unstable/main soapdenovo2 242+dfsg-3 (tar) [251 kB] Get:3 http://mirror.einval.org/debian unstable/main soapdenovo2 242+dfsg-3 (diff) [488 kB] Fetched 741 kB in 0s (2864 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/soapdenovo2-0SynbF/soapdenovo2-242+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/soapdenovo2-0SynbF' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libaio-dev, rename, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libaio-dev, rename, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [758 B] Get:5 copy:/<>/apt_archive ./ Packages [801 B] Fetched 2168 B in 0s (125 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-13-base:amd64 gcc-13-cross-base gcc-13-x86-64-linux-gnu gcc-13-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libaio-dev:amd64 libaio1:amd64 libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbam-dev:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcom-err2:amd64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:amd64 libgcc-13-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libgssapi-krb5-2:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libio-string-perl libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkeyutils1:amd64 libkrb5-3:amd64 libkrb5support0:amd64 liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1 libnsl-dev:amd64 libnsl2:amd64 libpipeline1 libquadmath0:amd64 libquadmath0-amd64-cross libssl3:amd64 libstdc++-13-dev:amd64 libstdc++-13-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsub-override-perl libtirpc-dev:amd64 libtirpc3:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:amd64 linux-libc-dev-amd64-cross m4 man-db po-debconf rename sensible-utils ucf zlib1g:amd64 zlib1g-dev:amd64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch g++-13-multilib-x86-64-linux-gnu gcc-13-doc gcc-13-multilib-x86-64-linux-gnu manpages-dev flex bison gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 libnss-nisplus:amd64 manpages-dev:amd64 krb5-doc:amd64 krb5-user:amd64 libstdc++-13-doc:amd64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:amd64 libarchive-cpio-perl krb5-locales:amd64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-13-base:amd64 gcc-13-cross-base gcc-13-x86-64-linux-gnu gcc-13-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libaio-dev:amd64 libaio1:amd64 libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbam-dev:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcom-err2:amd64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:amd64 libgcc-13-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libgssapi-krb5-2:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libio-string-perl libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkeyutils1:amd64 libkrb5-3:amd64 libkrb5support0:amd64 liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1 libnsl-dev:amd64 libnsl2:amd64 libpipeline1 libquadmath0:amd64 libquadmath0-amd64-cross libssl3:amd64 libstdc++-13-dev:amd64 libstdc++-13-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsub-override-perl libtirpc-dev:amd64 libtirpc3:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:amd64 linux-libc-dev-amd64-cross m4 man-db po-debconf rename sbuild-build-depends-main-dummy:amd64 sensible-utils ucf zlib1g:amd64 zlib1g-dev:amd64 0 upgraded, 111 newly installed, 0 to remove and 0 not upgraded. Need to get 104 MB of archives. After this operation, 424 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [932 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-6 [15.0 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.20 [19.3 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-2 [314 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libmagic1 arm64 1:5.45-2 [99.9 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.45-2 [42.8 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.21-13+b1 [159 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-2 [1122 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.39.2-1 [89.1 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.12.0-1 [1385 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.21-13 [496 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 gcc-13-x86-64-linux-gnu-base arm64 13.2.0-2cross1 [39.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 cpp-13-x86-64-linux-gnu arm64 13.2.0-2cross1 [9274 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 cpp-x86-64-linux-gnu arm64 4:13.2.0-1 [4116 B] Get:22 http://mirror.einval.org/debian unstable/main arm64 cross-config all 2.6.20 [16.3 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 binutils-x86-64-linux-gnu arm64 2.41-5 [2386 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-13-cross-base all 13.2.0-2cross1 [35.2 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-amd64-cross all 13.2.0-2cross1 [57.7 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libgomp1-amd64-cross all 13.2.0-2cross1 [128 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libitm1-amd64-cross all 13.2.0-2cross1 [25.5 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libatomic1-amd64-cross all 13.2.0-2cross1 [8988 B] Get:29 http://mirror.einval.org/debian unstable/main arm64 libasan8-amd64-cross all 13.2.0-2cross1 [2552 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 liblsan0-amd64-cross all 13.2.0-2cross1 [1101 kB] Get:31 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arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1+b1 [309 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libyaml-perl all 1.30-2 [63.4 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 dpkg-cross all 2.6.20 [25.8 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-amd64 all 12.10 [3488 B] Get:61 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.11.6 [81.9 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get:66 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:68 http://mirror.einval.org/debian unstable/main arm64 libelf1 arm64 0.189-4 [173 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1 [101 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.21-13+b1 [1249 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.11.6 [952 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.32.1-1 [27.9 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.32.1-1 [66.3 kB] Get:76 http://mirror.einval.org/debian unstable/main amd64 gcc-13-base amd64 13.2.0-4 [39.8 kB] Get:77 http://mirror.einval.org/debian unstable/main amd64 libgcc-s1 amd64 13.2.0-4 [57.7 kB] Get:78 http://mirror.einval.org/debian unstable/main amd64 libc6 amd64 2.37-10 [2755 kB] Get:79 http://mirror.einval.org/debian unstable/main amd64 libaio1 amd64 0.3.113-5 [13.4 kB] Get:80 http://mirror.einval.org/debian unstable/main amd64 libaio-dev amd64 0.3.113-5 [29.6 kB] Get:81 http://mirror.einval.org/debian unstable/main amd64 libasan8 amd64 13.2.0-4 [2558 kB] Get:82 http://mirror.einval.org/debian unstable/main amd64 libatomic1 amd64 13.2.0-4 [9272 B] Get:83 http://mirror.einval.org/debian unstable/main amd64 zlib1g amd64 1:1.2.13.dfsg-3 [87.0 kB] Get:84 http://mirror.einval.org/debian unstable/main amd64 linux-libc-dev amd64 6.5.3-1 [1985 kB] Get:85 http://mirror.einval.org/debian unstable/main amd64 libcrypt1 amd64 1:4.4.36-2 [89.7 kB] Get:86 http://mirror.einval.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.36-2 [118 kB] Get:87 http://mirror.einval.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-4 [32.8 kB] Get:88 http://mirror.einval.org/debian unstable/main amd64 libcom-err2 amd64 1.47.0-2+b1 [20.1 kB] Get:89 http://mirror.einval.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-4 [79.4 kB] Get:90 http://mirror.einval.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:91 http://mirror.einval.org/debian unstable/main amd64 libssl3 amd64 3.0.11-1 [2016 kB] Get:92 http://mirror.einval.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-4 [332 kB] Get:93 http://mirror.einval.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-4 [134 kB] Get:94 http://mirror.einval.org/debian unstable/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:95 http://mirror.einval.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:96 http://mirror.einval.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.3+ds-1 [191 kB] Get:97 http://mirror.einval.org/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:98 http://mirror.einval.org/debian unstable/main amd64 libc6-dev amd64 2.37-10 [1902 kB] Get:99 http://mirror.einval.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-3 [917 kB] Get:100 http://mirror.einval.org/debian unstable/main amd64 libbam-dev amd64 0.1.19+dfsg-6 [118 kB] Get:101 http://mirror.einval.org/debian unstable/main amd64 libgomp1 amd64 13.2.0-4 [131 kB] Get:102 http://mirror.einval.org/debian unstable/main amd64 libitm1 amd64 13.2.0-4 [26.1 kB] Get:103 http://mirror.einval.org/debian unstable/main amd64 liblsan0 amd64 13.2.0-4 [1102 kB] Get:104 http://mirror.einval.org/debian unstable/main amd64 libtsan2 amd64 13.2.0-4 [2334 kB] Get:105 http://mirror.einval.org/debian unstable/main amd64 libstdc++6 amd64 13.2.0-4 [694 kB] Get:106 http://mirror.einval.org/debian unstable/main amd64 libubsan1 amd64 13.2.0-4 [1010 kB] Get:107 http://mirror.einval.org/debian unstable/main amd64 libhwasan0 amd64 13.2.0-4 [1154 kB] Get:108 http://mirror.einval.org/debian unstable/main amd64 libquadmath0 amd64 13.2.0-4 [145 kB] Get:109 http://mirror.einval.org/debian unstable/main amd64 libgcc-13-dev amd64 13.2.0-4 [2543 kB] Get:110 http://mirror.einval.org/debian unstable/main amd64 libstdc++-13-dev amd64 13.2.0-4 [2222 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 rename all 2.01-2 [21.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 104 MB in 1s (86.4 MB/s) Selecting previously unselected package liblocale-gettext-perl. 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Setting up m4 (1.4.19-4) ... Setting up rename (2.01-2) ... update-alternatives: using /usr/bin/file-rename to provide /usr/bin/rename (rename) in auto mode Setting up file (1:5.45-2) ... Setting up libyaml-perl (1.30-2) ... Setting up libfakeroot:arm64 (1.32.1-1) ... Setting up fakeroot (1.32.1-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up gcc-13-base:amd64 (13.2.0-4) ... Setting up gcc-13-cross-base (13.2.0-2cross1) ... Setting up libquadmath0-amd64-cross (13.2.0-2cross1) ... Setting up autopoint (0.21-13) ... Setting up libc6-amd64-cross (2.37-3cross1) ... Setting up autoconf (2.71-3) ... Setting up gcc-13-x86-64-linux-gnu-base:arm64 (13.2.0-2cross1) ... Setting up sensible-utils (0.0.20) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libgcc-s1-amd64-cross (13.2.0-2cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libelf1:arm64 (0.189-4) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3) ... Setting up liblocale-gettext-perl (1.07-6) ... Setting up binutils-x86-64-linux-gnu (2.41-5) ... Setting up libstdc++6-amd64-cross (13.2.0-2cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-13+b1) ... Setting up libtool (2.4.7-7) ... Setting up cpp-13-x86-64-linux-gnu (13.2.0-2cross1) ... Setting up libasan8-amd64-cross (13.2.0-2cross1) ... Setting up liblsan0-amd64-cross (13.2.0-2cross1) ... Setting up libc6-dev-amd64-cross (2.37-3cross1) ... Setting up libtsan2-amd64-cross (13.2.0-2cross1) ... Setting up libgomp1-amd64-cross (13.2.0-2cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libitm1-amd64-cross (13.2.0-2cross1) ... Setting up libatomic1-amd64-cross (13.2.0-2cross1) ... Setting up libhwasan0-amd64-cross (13.2.0-2cross1) ... Setting up libubsan1-amd64-cross (13.2.0-2cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-2) ... Setting up cpp-x86-64-linux-gnu (4:13.2.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-amd64-cross (13.2.0-2cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-13-dev-amd64-cross (13.2.0-2cross1) ... Setting up gcc-13-x86-64-linux-gnu (13.2.0-2cross1) ... Setting up debhelper (13.11.6) ... Setting up libxml-simple-perl (2.25-2) ... Setting up g++-13-x86-64-linux-gnu (13.2.0-2cross1) ... Setting up gcc-x86-64-linux-gnu (4:13.2.0-1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-x86-64-linux-gnu (4:13.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-amd64 (12.10) ... Setting up libgcc-s1:amd64 (13.2.0-4) ... Setting up libc6:amd64 (2.37-10) ... Setting up libhwasan0:amd64 (13.2.0-4) ... Setting up libasan8:amd64 (13.2.0-4) ... Setting up libtsan2:amd64 (13.2.0-4) ... Setting up libaio1:amd64 (0.3.113-5) ... Setting up libstdc++6:amd64 (13.2.0-4) ... Setting up liblsan0:amd64 (13.2.0-4) ... Setting up libitm1:amd64 (13.2.0-4) ... Setting up libkeyutils1:amd64 (1.6.3-2) ... Setting up libssl3:amd64 (3.0.11-1) ... Setting up zlib1g:amd64 (1:1.2.13.dfsg-3) ... Setting up libcrypt1:amd64 (1:4.4.36-2) ... Setting up libcom-err2:amd64 (1.47.0-2+b1) ... Setting up libgomp1:amd64 (13.2.0-4) ... Setting up libaio-dev:amd64 (0.3.113-5) ... Setting up libkrb5support0:amd64 (1.20.1-4) ... Setting up libquadmath0:amd64 (13.2.0-4) ... Setting up libatomic1:amd64 (13.2.0-4) ... Setting up libk5crypto3:amd64 (1.20.1-4) ... Setting up libubsan1:amd64 (13.2.0-4) ... Setting up libgcc-13-dev:amd64 (13.2.0-4) ... Setting up libcrypt-dev:amd64 (1:4.4.36-2) ... Setting up libkrb5-3:amd64 (1.20.1-4) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-4) ... Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libtirpc-dev:amd64 (1.3.3+ds-1) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.37-10) ... Setting up libstdc++-13-dev:amd64 (13.2.0-4) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-3) ... Setting up libbam-dev:amd64 (0.1.19+dfsg-6) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any-amd64 any-ppc64 any-ia64) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-7-arm64 #1 SMP Debian 6.1.20-1 (2023-03-19) arm64 (aarch64) Toolchain package versions: binutils_2.41-5 dpkg-dev_1.22.0 g++-13_13.2.0-4 gcc-13_13.2.0-4 libc6-dev_2.37-10 libstdc++-13-dev_13.2.0-4 libstdc++-13-dev-amd64-cross_13.2.0-2cross1 libstdc++6_13.2.0-4 libstdc++6-amd64-cross_13.2.0-2cross1 linux-libc-dev_6.5.3-1 Package versions: apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.1 bash_5.2.15-2+b5 binutils_2.41-5 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Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: soapdenovo2 Binary: soapdenovo2 Architecture: any-amd64 any-ppc64 any-ia64 Version: 242+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Olivier Sallou , Andreas Tille Homepage: http://soap.genomics.org.cn/soapdenovo.html Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/soapdenovo2 Vcs-Git: https://salsa.debian.org/med-team/soapdenovo2.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libaio-dev, rename Package-List: soapdenovo2 deb science optional arch=any-amd64,any-ppc64,any-ia64 Checksums-Sha1: c817de22b6e7cea70a4be17c869ab04973963eab 251060 soapdenovo2_242+dfsg.orig.tar.xz be102dfb7719db0bd64ab4a31ded26e024cd0a86 487800 soapdenovo2_242+dfsg-3.debian.tar.xz Checksums-Sha256: ff787d4227c9862347663f7426c71b026559720c501033c96190f8aad26549a1 251060 soapdenovo2_242+dfsg.orig.tar.xz cc23a02d18e0762cd6dcb24082df6ae1deb4a31b0a63f0f7dbe987ec13edacb9 487800 soapdenovo2_242+dfsg-3.debian.tar.xz Files: d09be53b4104c67050aa3757c49b19d1 251060 soapdenovo2_242+dfsg.orig.tar.xz d8569d96fa9f54d0b97ce21cc31884a3 487800 soapdenovo2_242+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmOOVHQRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHjiA//bFAVY/ga9ckdP3d9oMacvAE3igdvAg0h cvboksVx1UPmUtR4oQRd1cDXo5chTpAStpmPaTUCKBVIksnVviDvgGLKLplwpxGE iXFoboNUJTOkp8Rv7fR6bQhlmH2NzxRgWc0uiyBLnG44W7V6u2l9lYT/VLzgIzm/ dTVf5Ps1Uie8v5ixJlQIcxgFYyMU/il0aqHA8hz3QmVQpSjb/oRT1W9D9lgT89o4 91Q1VSEI2Np1WnVZ4LqlwskBtBvTiv8GHGGGPKrJKiZFoP9xWzOMX3bDrrcfg6Re S39FfT+UFZvEjg2sgFHF9oVhQyS8V4b9vjLOl2JFgtjYkMqm0HWgSD9aEUaFzeMc pw1dWulJ5qJGpFFY9WYqoTm9lMXTsDYS21U3zd1F2qMkuNXKenx1K06rtelX0Y7r EtxsNA0K6wTvvqZN2fCPT6zcUCkuOLUTe9/n0p66dd4d95OcyOaOVlMT/ve4sR8R GkFiIPZlqODOEnDGznfIhIYZvkvGg5cjcLktWMcWsN9JmjsXm/2GWrc41mS/ahLf Yi1cIZa6lTzzSZO5WwBJAGRX8mQYpYjD/Nqj1YSwxy/qGrBfnCGkrlQD7T+g3EiG OpxGq8A5MhAkHXE3iEJylj2uqEfDkTTfyGWb7MWIHQSv3ZQNL8FC/+IV5zCSGt7m 2B0vuXo8qFA= =vlKs -----END PGP SIGNATURE----- gpgv: Signature made Mon Dec 5 20:28:36 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./soapdenovo2_242+dfsg-3.dsc: no acceptable signature found dpkg-source: info: extracting soapdenovo2 in /<> dpkg-source: info: unpacking soapdenovo2_242+dfsg.orig.tar.xz dpkg-source: info: unpacking soapdenovo2_242+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_libsam dpkg-source: info: applying fix_compilation dpkg-source: info: applying fix_usage_name dpkg-source: info: applying add_hardening dpkg-source: info: applying use_debian_zlib dpkg-source: info: applying reproducible dpkg-source: info: applying gcc-10.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aamd64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package soapdenovo2 dpkg-buildpackage: info: source version 242+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --no-parallel dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' pregraph_sparse_63mer.v1.0.3 cleaning done. SOAPdenovo-63mer cleaning done. SOAPdenovo-fusion cleaning done. make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' cd standardPregraph && make 63mer=1 clean && make 127mer=1 clean make[2]: Entering directory '/<>/standardPregraph' SOAPdenovo-63mer cleaning done. make[2]: Leaving directory '/<>/standardPregraph' make[2]: Entering directory '/<>/standardPregraph' SOAPdenovo-127mer cleaning done. make[2]: Leaving directory '/<>/standardPregraph' cd sparsePregraph && make clean make[2]: Entering directory '/<>/sparsePregraph' pregraph_sparse_63mer.v1.0.3 cleaning done. make[2]: Leaving directory '/<>/sparsePregraph' dh_clean make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch --no-parallel dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a dh_auto_build -a make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc make[1]: Entering directory '/<>' pregraph_sparse_63mer.v1.0.3 cleaning done. Compiling build_graph.cpp... Compiling build_edge.cpp... Compiling multi_threads.cpp... Compiling build_preArc.cpp... Compiling pregraph_sparse.cpp... Compiling io_func.cpp... Compiling global.cpp... Compiling convert_soapdenovo.cpp... pregraph_sparse_63mer.v1.0.3 objects generated. SOAPdenovo-63mer cleaning done. Compiling arc.c... Compiling attachPEinfo.c... Compiling bubble.c... Compiling check.c... Compiling compactEdge.c... Compiling concatenateEdge.c... Compiling connect.c... Compiling contig.c... Compiling cutTipPreGraph.c... Compiling cutTip_graph.c... Compiling darray.c... Compiling dfib.c... Compiling dfibHeap.c... Compiling fib.c... Compiling fibHeap.c... Compiling hashFunction.c... Compiling kmer.c... Compiling lib.c... Compiling loadGraph.c... Compiling loadPath.c... Compiling loadPreGraph.c... Compiling localAsm.c... Compiling main.c... Compiling map.c... Compiling mem_manager.c... Compiling newhash.c... Compiling node2edge.c... Compiling orderContig.c... Compiling output_contig.c... Compiling output_pregraph.c... Compiling output_scaffold.c... Compiling pregraph.c... Compiling prlHashCtg.c... Compiling prlHashReads.c... Compiling prlRead2Ctg.c... Compiling prlRead2path.c... Compiling prlReadFillGap.c... Compiling read2scaf.c... Compiling readInterval.c... Compiling stack.c... Compiling readseq1by1.c... Compiling scaffold.c... Compiling searchPath.c... Compiling seq.c... Compiling splitReps.c... Compiling cutTip_graph2.c... Compiling linearEdge.c... Compiling kmerhash.c... Compiling read2edge.c... Compiling iterate.c... SOAPdenovo-63mer objects generated. /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: warning: relocation against `_ZTTSt14basic_ofstreamIcSt11char_traitsIcEE' in read-only section `.text.unlikely' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::_Rb_tree_iterator >::operator--()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:302:(.text+0xf6): undefined reference to `std::_Rb_tree_decrement(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:302:(.text+0x14b): undefined reference to `std::_Rb_tree_decrement(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::_Rb_tree_iterator >::operator++()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:287:(.text+0x184): undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `void std::__cxx11::basic_string, std::allocator >::_M_construct(char*, char*, std::forward_iterator_tag)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.tcc:225:(.text+0x276): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator > >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x399): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::_M_insert_node(std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node >*)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:2385:(.text+0x3d8): undefined reference to `std::_Rb_tree_insert_and_rebalance(bool, std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator > >::deallocate(std::_Rb_tree_node >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x404): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator > >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x459): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::_Rb_tree, std::_Select1st >, std::less, std::allocator > >::_M_insert_node(std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node >*)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:2385:(.text+0x498): undefined reference to `std::_Rb_tree_insert_and_rebalance(bool, std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator > >::deallocate(std::_Rb_tree_node >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x4c4): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x5a3): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x5be): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x5d9): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x5fe): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o:/usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168: more undefined references to `operator delete(void*, unsigned long)' follow /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::basic_string, std::allocator >::append(char const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x923): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x9f4): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check_length(unsigned long, unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0xb8c): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0xde7): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x14fb): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `void std::__cxx11::list >::_M_insert(std::_List_iterator, stacked_node2* const&)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_list.h:2006:(.text+0x150a): undefined reference to `std::__detail::_List_node_base::_M_hook(std::__detail::_List_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x1578): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `void std::__cxx11::list >::_M_insert(std::_List_iterator, stacked_node2* const&)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_list.h:2006:(.text+0x1587): undefined reference to `std::__detail::_List_node_base::_M_hook(std::__detail::_List_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x1f75): undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x1f7c): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x1f9b): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x1fbb): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x1fd2): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::basic_ofstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:799:(.text+0x1fd9): undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:799:(.text+0x1ffb): undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:801:(.text+0x2006): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::open(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:930:(.text+0x201a): undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:935:(.text+0x2036): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x204a): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ostream::operator<<(unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/ostream:173:(.text+0x2055): undefined reference to `std::ostream& std::ostream::_M_insert(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x2086): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x208e): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x20a2): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ostream::operator<<(unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/ostream:173:(.text+0x20ad): undefined reference to `std::ostream& std::ostream::_M_insert(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x20de): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x20e6): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x20fa): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ostream::operator<<(double)': /usr/x86_64-linux-gnu/include/c++/13/ostream:223:(.text+0x212a): undefined reference to `std::ostream& std::ostream::_M_insert(double)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x215b): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x2163): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x2177): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x21a7): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x21af): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x21da): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x21e2): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::_Rb_tree_iterator >::operator++()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:287:(.text+0x21ea): undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `stat_edge_num(hashtable2*)': ././build_edge.cpp:809:(.text+0x2201): undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x2214): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ostream::operator<<(unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/ostream:173:(.text+0x2220): undefined reference to `std::ostream& std::ostream::_M_insert(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x224b): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::close()': /usr/x86_64-linux-gnu/include/c++/13/fstream:1002:(.text+0x22d6): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:1002:(.text+0x22e5): undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::~basic_ofstream()': /usr/x86_64-linux-gnu/include/c++/13/fstream:870:(.text+0x230d): undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:256:(.text+0x231f): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x232c): undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2333): undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2345): undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::~basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text+0x234c): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text+0x2358): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x236d): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x237a): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator > >::deallocate(std::_Rb_tree_node >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x239e): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x23d4): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x2405): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x2436): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x2467): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::setstate(std::_Ios_Iostate)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x24db): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x24f7): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x251c): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2534): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x254c): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2564): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2581): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x28ac): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x28b5): undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x28bc): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x28d3): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x290e): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::basic_ofstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:799:(.text+0x2915): undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:799:(.text+0x2941): undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:801:(.text+0x294e): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::open(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:930:(.text+0x2962): undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:935:(.text+0x2982): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x29a4): undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x29bb): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:432:(.text+0x29f6): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::basic_ofstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:799:(.text+0x29fd): undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:799:(.text+0x2a29): undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:801:(.text+0x2a36): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::open(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:930:(.text+0x2a4a): undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:935:(.text+0x2a6b): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x2a8b): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x2a93): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::_Rb_tree_iterator >::operator++()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:287:(.text+0x2a9b): undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `stat_edge_cvg_len(hashtable2*)': ././build_edge.cpp:860:(.text+0x2ab5): undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x2acc): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ostream::operator<<(unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/ostream:173:(.text+0x2ad9): undefined reference to `std::ostream& std::ostream::_M_insert(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x2b0c): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x2b5a): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x2b62): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::_Rb_tree_iterator >::operator++()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:287:(.text+0x2b6a): undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `stat_edge_cvg_len(hashtable2*)': ././build_edge.cpp:865:(.text+0x2b83): undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x2b9a): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ostream::operator<<(unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/ostream:173:(.text+0x2ba6): undefined reference to `std::ostream& std::ostream::_M_insert(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x2bd1): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::close()': /usr/x86_64-linux-gnu/include/c++/13/fstream:1002:(.text+0x2c05): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:1002:(.text+0x2c18): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:1002:(.text+0x2c27): undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::~basic_ofstream()': /usr/x86_64-linux-gnu/include/c++/13/fstream:870:(.text+0x2c50): undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:256:(.text+0x2c65): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2c74): undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x2c79): undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2c8e): undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::~basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text+0x2c99): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x2cbb): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::~basic_ofstream()': /usr/x86_64-linux-gnu/include/c++/13/fstream:870:(.text+0x2ccd): undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:256:(.text+0x2ce2): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x2cef): undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2d04): undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::~basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text+0x2d1c): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x2d31): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::setstate(std::_Ios_Iostate)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x2d78): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x2d88): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x2da8): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x2dc9): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2deb): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2e03): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3507): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `process_1stack(hashtable2*, int, std::__cxx11::list >&, _IO_FILE*, std::vector >&) [clone .isra.0]': ././build_edge.cpp:1320:(.text+0x358c): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x3885): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `void std::__cxx11::list >::_M_insert(std::_List_iterator, stacked_node2* const&)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_list.h:2006:(.text+0x3899): undefined reference to `std::__detail::_List_node_base::_M_hook(std::__detail::_List_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::list >::_M_erase(std::_List_iterator)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_list.h:2016:(.text+0x3924): undefined reference to `std::__detail::_List_node_base::_M_unhook()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator >::deallocate(std::_List_node*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3931): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x39ac): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x3a2e): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `void std::__cxx11::list >::_M_insert(std::_List_iterator, stacked_node2* const&)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_list.h:2006:(.text+0x3a42): undefined reference to `std::__detail::_List_node_base::_M_hook(std::__detail::_List_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::list >::_M_erase(std::_List_iterator)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_list.h:2016:(.text+0x3ac8): undefined reference to `std::__detail::_List_node_base::_M_unhook()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator >::deallocate(std::_List_node*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3ad5): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3b4d): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3da5): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3f17): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3f3e): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o:././build_edge.cpp:1116: more undefined references to `operator delete(void*, unsigned long)' follow /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::basic_string, std::allocator >::push_back(char)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1553:(.text+0x4131): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1553:(.text+0x4161): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1553:(.text+0x4191): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1553:(.text+0x41c1): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_mutate(unsigned long, unsigned long, char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x4): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x29): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x2e): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::basic_ofstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:803:(.text.unlikely+0x3c): undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::~basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text.unlikely+0x43): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text.unlikely+0x4a): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x64): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x71): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `stat_edge_num(hashtable2*)': ././build_edge.cpp:813:(.text.unlikely+0x9e): undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::basic_ofstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:803:(.text.unlikely+0xaf): undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::~basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text.unlikely+0xc5): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0xe2): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x119): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x11e): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x128): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x12d): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ofstream >::basic_ofstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:803:(.text.unlikely+0x13c): undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ostream >::~basic_ostream()': /usr/x86_64-linux-gnu/include/c++/13/ostream:95:(.text.unlikely+0x14f): undefined reference to `VTT for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x16c): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `stat_edge_cvg_len(hashtable2*)': ././build_edge.cpp:870:(.text.unlikely+0x175): undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././build_edge.cpp:870:(.text.unlikely+0x184): undefined reference to `std::basic_ofstream >::~basic_ofstream()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `process_1stack(hashtable2*, int, std::__cxx11::list >&, _IO_FILE*, std::vector >&) [clone .isra.0]': ././build_edge.cpp:1320:(.text.unlikely+0x198): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x1a0): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x1c6): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x1d3): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x1dd): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator::deallocate(preedge2*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text.unlikely+0x1fa): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator >::deallocate(std::_List_node*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text.unlikely+0x219): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x226): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text._ZNSt6vectorI8preedge2SaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_[_ZNSt6vectorI8preedge2SaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_]+0xda): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::__new_allocator::deallocate(preedge2*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text._ZNSt6vectorI8preedge2SaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_[_ZNSt6vectorI8preedge2SaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_]+0x116): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o: in function `std::vector >::_M_check_len(unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_vector.h:1896:(.text._ZNSt6vectorI8preedge2SaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_[_ZNSt6vectorI8preedge2SaIS0_EE17_M_realloc_insertIJRKS0_EEEvN9__gnu_cxx17__normal_iteratorIPS0_S2_EEDpOT_]+0x180): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o:(.data.rel.ro+0x0): undefined reference to `vtable for std::basic_ofstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_edge.o:(.data.rel.local.DW.ref.__gxx_personality_v0[DW.ref.__gxx_personality_v0]+0x0): undefined reference to `__gxx_personality_v0' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::append(char const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x1988): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x19cb): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x1a0d): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x1a46): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x1a84): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o:/usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462: more undefined references to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' follow /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x1b7d): undefined reference to `std::cerr' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x1bda): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x1c09): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x1c11): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1d4e): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1d6e): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1d8b): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x1dc4): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x1e1e): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text+0x1e45): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text+0x1e4f): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text+0x1e59): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check_length(unsigned long, unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1e81): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1eb1): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1ee1): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1f1b): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1f51): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o:/usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390: more undefined references to `std::__throw_length_error(char const*)' follow /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::append(char const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x2051): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x208a): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x20c8): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x20f4): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ios >::basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x211b): undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x2122): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >::basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:697:(.text+0x2137): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:697:(.text+0x2146): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:698:(.text+0x217f): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:698:(.text+0x219a): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::basic_ifstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:537:(.text+0x21a1): undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:537:(.text+0x21cd): undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:539:(.text+0x21d8): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::open(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:667:(.text+0x21e8): undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:672:(.text+0x2207): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ios >::basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x222c): undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x2233): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >::basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:697:(.text+0x224a): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:697:(.text+0x2259): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:698:(.text+0x2290): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:698:(.text+0x22a8): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::basic_ifstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:537:(.text+0x22af): undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:537:(.text+0x22db): undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:539:(.text+0x22e8): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::open(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:667:(.text+0x22f8): undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:672:(.text+0x2317): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >& std::getline, std::allocator >(std::basic_istream >&, std::__cxx11::basic_string, std::allocator >&)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:4062:(.text+0x2385): undefined reference to `std::basic_istream >& std::getline, std::allocator >(std::basic_istream >&, std::__cxx11::basic_string, std::allocator >&, char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:4062:(.text+0x23bf): undefined reference to `std::basic_istream >& std::getline, std::allocator >(std::basic_istream >&, std::__cxx11::basic_string, std::allocator >&, char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x23d5): undefined reference to `std::cerr' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >& std::getline, std::allocator >(std::basic_istream >&, std::__cxx11::basic_string, std::allocator >&)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:4062:(.text+0x2446): undefined reference to `std::basic_istream >& std::getline, std::allocator >(std::basic_istream >&, std::__cxx11::basic_string, std::allocator >&, char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text+0x24c0): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text+0x24ee): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text+0x24f6): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `LoadingSparseKmerGraph2(hashtable2*, char*)': ././build_graph.cpp:760:(.text+0x2521): undefined reference to `std::istream::read(char*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././build_graph.cpp:769:(.text+0x2579): undefined reference to `std::istream::read(char*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././build_graph.cpp:778:(.text+0x25b9): undefined reference to `std::istream::read(char*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x2613): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::~basic_ifstream()': /usr/x86_64-linux-gnu/include/c++/13/fstream:607:(.text+0x261a): undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x2626): undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:256:(.text+0x2647): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2656): undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x265b): undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2670): undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >::~basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text+0x2677): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text+0x2683): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x269e): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x26b7): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::~basic_ifstream()': /usr/x86_64-linux-gnu/include/c++/13/fstream:607:(.text+0x26be): undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:256:(.text+0x26e4): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x26f1): undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x2706): undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >::~basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text+0x270d): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text+0x2719): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x2734): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x274d): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x2770): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x2790): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x27c4): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x27fc): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::resize(unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1102:(.text+0x2838): undefined reference to `std::__cxx11::basic_string, std::allocator >::resize(unsigned long, char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x285a): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x289d): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ios >::setstate(std::_Ios_Iostate)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x28d6): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x28e6): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2907): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check_length(unsigned long, unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x2937): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2953): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check_length(unsigned long, unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x2976): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x29a2): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x29ce): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x29f3): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2a10): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x363): undefined reference to `std::cout' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x37a): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `get_sub_arr(unsigned long*, int, int, int, unsigned long*)': ././inc/seq_util.h:177:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x385): undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::operator<< >(std::basic_ostream >&, char const*)': /usr/x86_64-linux-gnu/include/c++/13/ostream:667:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x39c): undefined reference to `std::basic_ostream >& std::__ostream_insert >(std::basic_ostream >&, char const*, long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `get_sub_arr(unsigned long*, int, int, int, unsigned long*)': ././inc/seq_util.h:177:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x3a7): undefined reference to `std::ostream::operator<<(int)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::endl >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:736:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x3d0): undefined reference to `std::ostream::put(char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x404): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x444): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ostream >& std::flush >(std::basic_ostream >&)': /usr/x86_64-linux-gnu/include/c++/13/ostream:758:(.text._Z11get_sub_arrPmiiiS_[_Z11get_sub_arrPmiiiS_]+0x3fc): undefined reference to `std::ostream::flush()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x6): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x10): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x1a): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::basic_ifstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/bits/allocator.h:184:(.text.unlikely+0x44): undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >::~basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text.unlikely+0x4b): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text.unlikely+0x52): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x7c): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x89): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `LoadingSparseKmerGraph2(hashtable2*, char*)': ././build_graph.cpp:790:(.text.unlikely+0x93): undefined reference to `std::basic_ifstream >::~basic_ifstream()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x9d): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0xa7): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0xd1): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `LoadingSparseKmerGraph2(hashtable2*, char*)': ././build_graph.cpp:790:(.text.unlikely+0xd9): undefined reference to `std::basic_ifstream >::~basic_ifstream()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0xe0): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0xe5): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ifstream >::basic_ifstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:541:(.text.unlikely+0xf4): undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_istream >::~basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text.unlikely+0xfb): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text.unlikely+0x102): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x12c): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x139): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_graph.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x143): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x148): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::__new_allocator > >::deallocate(std::_Rb_tree_node >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xa3): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xbe): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xd9): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xfe): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x11c): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o:/usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168: more undefined references to `operator delete(void*, unsigned long)' follow /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::__new_allocator > >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x349): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::_Rb_tree, std::_Select1st >, classcomp, std::allocator > >::_M_insert_node(std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node >*)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:2385:(.text+0x389): undefined reference to `std::_Rb_tree_insert_and_rebalance(bool, std::_Rb_tree_node_base*, std::_Rb_tree_node_base*, std::_Rb_tree_node_base&)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::__new_allocator > >::deallocate(std::_Rb_tree_node >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x3b4): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::_Rb_tree_iterator >::operator++()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:287:(.text+0xab4): undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::__new_allocator > >::deallocate(std::_Rb_tree_node >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xbe7): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::_Rb_tree_iterator >::operator--()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:302:(.text._ZNSt8_Rb_treeI7kmer_t2St4pairIKS0_iESt10_Select1stIS3_E9classcompSaIS3_EE24_M_get_insert_unique_posERS2_[_ZNSt8_Rb_treeI7kmer_t2St4pairIKS0_iESt10_Select1stIS3_E9classcompSaIS3_EE24_M_get_insert_unique_posERS2_]+0xb0): undefined reference to `std::_Rb_tree_decrement(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::_Rb_tree_iterator >::operator++()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:287:(.text._ZNSt8_Rb_treeI7kmer_t2St4pairIKS0_iESt10_Select1stIS3_E9classcompSaIS3_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS3_ERS2_[_ZNSt8_Rb_treeI7kmer_t2St4pairIKS0_iESt10_Select1stIS3_E9classcompSaIS3_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS3_ERS2_]+0x43): undefined reference to `std::_Rb_tree_increment(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/convert_soapdenovo.o: in function `std::_Rb_tree_iterator >::operator--()': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_tree.h:302:(.text._ZNSt8_Rb_treeI7kmer_t2St4pairIKS0_iESt10_Select1stIS3_E9classcompSaIS3_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS3_ERS2_[_ZNSt8_Rb_treeI7kmer_t2St4pairIKS0_iESt10_Select1stIS3_E9classcompSaIS3_EE29_M_get_insert_hint_unique_posESt23_Rb_tree_const_iteratorIS3_ERS2_]+0xb8): undefined reference to `std::_Rb_tree_decrement(std::_Rb_tree_node_base*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `void std::__cxx11::basic_string, std::allocator >::_M_construct(char*, char*, std::forward_iterator_tag)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.tcc:225:(.text+0x76): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `void std::__cxx11::basic_string, std::allocator >::_M_construct(char const*, char const*, std::forward_iterator_tag)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.tcc:225:(.text+0x126): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_create(unsigned long&, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x2e2): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::resize(unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1102:(.text+0x32e): undefined reference to `std::__cxx11::basic_string, std::allocator >::resize(unsigned long, char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check(unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:379:(.text+0x490): undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator, std::allocator > >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text+0x9f9): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::find_last_of(char const*, unsigned long) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2944:(.text+0xa8f): undefined reference to `std::__cxx11::basic_string, std::allocator >::find_last_of(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xb66): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xc66): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::find_last_of(char const*, unsigned long) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2944:(.text+0xe00): undefined reference to `std::__cxx11::basic_string, std::allocator >::find_last_of(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xed5): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xf8d): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::find_last_of(char const*, unsigned long) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2944:(.text+0x1108): undefined reference to `std::__cxx11::basic_string, std::allocator >::find_last_of(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x11dc): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1299): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x13bd): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x13d5): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::append(char const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x1581): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x15e9): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x16ef): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:1462:(.text+0x174f): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_append(char const*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator, std::allocator > >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:135:(.text+0x1bdf): undefined reference to `std::__throw_bad_array_new_length()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check(unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:379:(.text+0x1c3c): undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check_length(unsigned long, unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1cd6): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1cf5): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1d14): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:390:(.text+0x1d33): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check(unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:379:(.text+0x1d62): undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:379:(.text+0x1da9): undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ios >::basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x1e46): undefined reference to `std::ios_base::ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_istream >::basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:697:(.text+0x1e4d): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ios >::basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:462:(.text+0x1e58): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_istream >::basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:697:(.text+0x1e6b): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/istream:698:(.text+0x1eb2): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ifstream >::basic_ifstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:537:(.text+0x1eb9): undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:537:(.text+0x1edf): undefined reference to `std::basic_filebuf >::basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:539:(.text+0x1eea): undefined reference to `std::basic_ios >::init(std::basic_streambuf >*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ifstream >::open(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:667:(.text+0x1efa): undefined reference to `std::basic_filebuf >::open(char const*, std::_Ios_Openmode)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:672:(.text+0x1f16): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_istream >& std::getline, std::allocator >(std::basic_istream >&, std::__cxx11::basic_string, std::allocator >&)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:4062:(.text+0x1f6b): undefined reference to `std::basic_istream >& std::getline, std::allocator >(std::basic_istream >&, std::__cxx11::basic_string, std::allocator >&, char)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::ctype::widen(char) const': /usr/x86_64-linux-gnu/include/c++/13/bits/locale_facets.h:884:(.text+0x1fb7): undefined reference to `std::ctype::_M_widen_init() const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2686:(.text+0x1ff4): undefined reference to `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2686:(.text+0x201a): undefined reference to `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2686:(.text+0x203a): undefined reference to `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x20ed): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::find_first_of(char const*, unsigned long) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2855:(.text+0x213a): undefined reference to `std::__cxx11::basic_string, std::allocator >::find_first_of(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2686:(.text+0x2159): undefined reference to `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x221a): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:2686:(.text+0x226a): undefined reference to `std::__cxx11::basic_string, std::allocator >::find(char const*, unsigned long, unsigned long) const' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x22a0): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ifstream >::~basic_ifstream()': /usr/x86_64-linux-gnu/include/c++/13/fstream:607:(.text+0x22a7): undefined reference to `vtable for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x22c4): undefined reference to `vtable for std::basic_filebuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:256:(.text+0x22ce): undefined reference to `std::basic_filebuf >::close()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:259:(.text+0x22db): undefined reference to `std::__basic_file::~__basic_file()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_streambuf >::~basic_streambuf()': /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x22e2): undefined reference to `vtable for std::basic_streambuf >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/streambuf:205:(.text+0x22f4): undefined reference to `std::locale::~locale()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_istream >::~basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text+0x2309): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x2315): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text+0x232b): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ios >::setstate(std::_Ios_Iostate)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:158:(.text+0x2387): undefined reference to `std::basic_ios >::clear(std::_Ios_Iostate)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::ctype const& std::__check_facet >(std::ctype const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:50:(.text+0x2479): undefined reference to `std::__throw_bad_cast()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::_M_check(unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:379:(.text+0x24ce): undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:379:(.text+0x24f9): undefined reference to `std::__throw_out_of_range_fmt(char const*, ...)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x6): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text.unlikely+0x2f): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x42): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >* std::__do_uninit_copy<__gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >*>(__gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, __gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >*)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_uninitialized.h:123:(.text.unlikely+0x49): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x64): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text.unlikely+0x89): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >* std::__do_uninit_copy<__gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >*>(__gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, __gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >*)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_uninitialized.h:126:(.text.unlikely+0xbc): undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0xce): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >* std::__do_uninit_copy<__gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >*>(__gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, __gnu_cxx::__normal_iterator, std::allocator > const*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator >*)': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_uninitialized.h:123:(.text.unlikely+0xdf): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ifstream >::basic_ifstream(char const*, std::_Ios_Openmode)': /usr/x86_64-linux-gnu/include/c++/13/fstream:541:(.text.unlikely+0xf3): undefined reference to `std::basic_filebuf >::~basic_filebuf()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_istream >::~basic_istream()': /usr/x86_64-linux-gnu/include/c++/13/istream:106:(.text.unlikely+0xfe): undefined reference to `VTT for std::basic_ifstream >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_ios >::~basic_ios()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x11b): undefined reference to `vtable for std::basic_ios >' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/bits/basic_ios.h:282:(.text.unlikely+0x128): undefined reference to `std::ios_base::~ios_base()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::basic_filebuf >::~basic_filebuf()': /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x148): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: /usr/x86_64-linux-gnu/include/c++/13/fstream:257:(.text.unlikely+0x14d): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text.unlikely+0x15a): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `read_lib(std::vector, std::allocator >, std::allocator, std::allocator > > >&, char*)': ././io_func.cpp:232:(.text.unlikely+0x162): undefined reference to `std::basic_ifstream >::~basic_ifstream()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator, std::allocator > >::allocate(unsigned long, void const*)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:147:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x124): undefined reference to `operator new(unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x1df): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_check_len(unsigned long, char const*) const': /usr/x86_64-linux-gnu/include/c++/13/bits/stl_vector.h:1896:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x357): undefined reference to `std::__throw_length_error(char const*)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/x86_64-linux-gnu/include/c++/13/bits/vector.tcc:504:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x363): undefined reference to `__cxa_begin_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__cxx11::basic_string, std::allocator >::~basic_string()': /usr/x86_64-linux-gnu/include/c++/13/bits/basic_string.h:792:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x370): undefined reference to `std::__cxx11::basic_string, std::allocator >::_M_dispose()' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/x86_64-linux-gnu/include/c++/13/bits/vector.tcc:512:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x375): undefined reference to `__cxa_rethrow' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x385): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/io_func.o: in function `void std::vector, std::allocator >, std::allocator, std::allocator > > >::_M_realloc_insert, std::allocator > const&>(__gnu_cxx::__normal_iterator, std::allocator >*, std::vector, std::allocator >, std::allocator, std::allocator > > > >, std::__cxx11::basic_string, std::allocator > const&)': /usr/x86_64-linux-gnu/include/c++/13/bits/vector.tcc:504:(.text._ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_[_ZNSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS5_EE17_M_realloc_insertIJRKS5_EEEvN9__gnu_cxx17__normal_iteratorIPS5_S7_EEDpOT_]+0x393): undefined reference to `__cxa_end_catch' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xd08): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0xd2f): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `call_pregraph_sparse': ././pregraph_sparse.cpp:118:(.text+0xe8e): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././pregraph_sparse.cpp:119:(.text+0xeb2): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././pregraph_sparse.cpp:232:(.text+0x136b): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././pregraph_sparse.cpp:233:(.text+0x13b9): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././pregraph_sparse.cpp:118:(.text+0x19bf): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o:././pregraph_sparse.cpp:232: more undefined references to `operator new[](unsigned long)' follow /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1ab9): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `call_pregraph_sparse': ././pregraph_sparse.cpp:216:(.text+0x1ad8): undefined reference to `operator delete[](void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1b0e): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `call_pregraph_sparse': ././pregraph_sparse.cpp:217:(.text+0x1b2d): undefined reference to `operator delete[](void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1b6e): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `call_pregraph_sparse': ././pregraph_sparse.cpp:320:(.text+0x1b8c): undefined reference to `operator delete[](void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1bc1): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `call_pregraph_sparse': ././pregraph_sparse.cpp:321:(.text+0x1bdf): undefined reference to `operator delete[](void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././pregraph_sparse.cpp:119:(.text+0x1cc5): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text.unlikely+0x32): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/pregraph_sparse.o: in function `std::__new_allocator, std::allocator > >::deallocate(std::__cxx11::basic_string, std::allocator >*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text.unlikely+0x58): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_preArc.o: in function `build_preArc_threaded(preArc_array*, vertex_hash2*, int, int, std::vector, std::allocator >, std::allocator, std::allocator > > >*, int)': ././build_preArc.cpp:1047:(.text+0x15b9): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././build_preArc.cpp:1048:(.text+0x15d3): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_preArc.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x18af): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_preArc.o: in function `build_preArc_threaded(preArc_array*, vertex_hash2*, int, int, std::vector, std::allocator >, std::allocator, std::allocator > > >*, int)': ././build_preArc.cpp:1120:(.text+0x18ce): undefined reference to `operator delete[](void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_preArc.o: in function `std::__new_allocator::deallocate(char*, unsigned long)': /usr/x86_64-linux-gnu/include/c++/13/bits/new_allocator.h:168:(.text+0x1917): undefined reference to `operator delete(void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: sparsePregraph/build_preArc.o: in function `build_preArc_threaded(preArc_array*, vertex_hash2*, int, int, std::vector, std::allocator >, std::allocator, std::allocator > > >*, int)': ././build_preArc.cpp:1121:(.text+0x1936): undefined reference to `operator delete[](void*, unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././build_preArc.cpp:1047:(.text+0x1983): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././build_preArc.cpp:1048:(.text+0x19d5): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: ././build_preArc.cpp:1048:(.text+0x1a44): undefined reference to `operator new[](unsigned long)' /usr/lib/gcc-cross/x86_64-linux-gnu/13/../../../../x86_64-linux-gnu/bin/ld: warning: creating DT_TEXTREL in a PIE collect2: error: ld returned 1 exit status make[1]: *** [Makefile:62: SOAPdenovo-63mer] Error 1 make[1]: Leaving directory '/<>' dh_auto_build: error: make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc returned exit code 2 make: *** [debian/rules:14: binary-arch] Error 25 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2023-09-27T00:26:41Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 8964 Build-Time: 117 Distribution: unstable Fail-Stage: build Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 50 Job: soapdenovo2_242+dfsg-3 Machine Architecture: arm64 Package: soapdenovo2 Package-Time: 203 Source-Version: 242+dfsg-3 Space: 8964 Status: attempted Version: 242+dfsg-3 -------------------------------------------------------------------------------- Finished at 2023-09-27T00:26:41Z Build needed 00:03:23, 8964k disk space