sbuild (Debian sbuild) 0.78.1 (09 February 2019) on mjolnir +==============================================================================+ | spaln 2.4.1+dfsg-3 (i386) Tue, 15 Jun 2021 00:33:21 +0000 | +==============================================================================+ Package: spaln Version: 2.4.1+dfsg-3 Source Version: 2.4.1+dfsg-3 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/crossqa-sid-8a938aaf-9d2a-4515-be05-50d4815fbab4' with '<>' I: NOTICE: Log filtering will replace 'build/spaln-16h0lq/resolver-i0Ws6p' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian sid InRelease [161 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:2 http://mirror.einval.org/debian sid/main Sources.diff/Index [63.6 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:4 http://mirror.einval.org/debian sid/main i386 Packages [8566 kB] Get:5 http://mirror.einval.org/debian sid/main Sources [9173 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 Packages [8512 kB] Fetched 26.4 MB in 7s (3825 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'spaln' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/spaln.git Please use: git clone https://salsa.debian.org/med-team/spaln.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 19.7 MB of source archives. Get:1 http://mirror.einval.org/debian sid/main spaln 2.4.1+dfsg-3 (dsc) [2037 B] Get:2 http://mirror.einval.org/debian sid/main spaln 2.4.1+dfsg-3 (tar) [19.7 MB] Get:3 http://mirror.einval.org/debian sid/main spaln 2.4.1+dfsg-3 (diff) [4112 B] Fetched 19.7 MB in 0s (55.4 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/spaln-16h0lq/spaln-2.4.1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/spaln-16h0lq' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [411 B] Get:5 copy:/<>/apt_archive ./ Packages [500 B] Fetched 1868 B in 0s (46.0 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-10-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-10-i686-linux-gnu g++-i686-linux-gnu gcc-10-base:i386 gcc-10-cross-base gcc-10-i686-linux-gnu gcc-10-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:i386 libgcc-10-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu67 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:i386 libnsl2:i386 libpipeline1 libquadmath0:i386 libquadmath0-i386-cross libsigsegv2 libssl1.1:i386 libstdc++-10-dev:i386 libstdc++-10-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-10-locales cpp-doc dh-make binutils-multiarch g++-10-multilib-i686-linux-gnu gcc-10-doc gcc-10-multilib-i686-linux-gnu manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:i386 libc-l10n:i386 locales:i386 manpages-dev:i386 krb5-doc:i386 krb5-user:i386 libstdc++-10-doc:i386 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:i386 libnss-nis:i386 libnss-nisplus:i386 libarchive-cpio-perl krb5-locales:i386 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-10-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-10-i686-linux-gnu g++-i686-linux-gnu gcc-10-base:i386 gcc-10-cross-base gcc-10-i686-linux-gnu gcc-10-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-10-dev:i386 libgcc-10-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu67 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:i386 libnsl2:i386 libpipeline1 libquadmath0:i386 libquadmath0-i386-cross libsigsegv2 libssl1.1:i386 libstdc++-10-dev:i386 libstdc++-10-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:i386 sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 0 upgraded, 100 newly installed, 0 to remove and 0 not upgraded. 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Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://mirror.einval.org/debian sid/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get:3 http://mirror.einval.org/debian sid/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:4 http://mirror.einval.org/debian sid/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get:5 http://mirror.einval.org/debian sid/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get:7 http://mirror.einval.org/debian sid/main arm64 liblocale-gettext-perl arm64 1.07-4+b1 [18.9 kB] Get:8 http://mirror.einval.org/debian sid/main i386 gcc-10-base i386 10.2.1-6 [201 kB] Get:9 http://mirror.einval.org/debian sid/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get:10 http://mirror.einval.org/debian sid/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get:11 http://mirror.einval.org/debian sid/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get:12 http://mirror.einval.org/debian sid/main arm64 file arm64 1:5.39-3 [69.1 kB] Get:13 http://mirror.einval.org/debian sid/main arm64 gettext-base arm64 0.21-4 [173 kB] Get:14 http://mirror.einval.org/debian sid/main arm64 ucf all 3.0043 [74.0 kB] Get:15 http://mirror.einval.org/debian sid/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get:16 http://mirror.einval.org/debian sid/main arm64 m4 arm64 1.4.18-5 [199 kB] Get:17 http://mirror.einval.org/debian sid/main arm64 autoconf all 2.69-14 [313 kB] Get:18 http://mirror.einval.org/debian sid/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:19 http://mirror.einval.org/debian sid/main arm64 automake all 1:1.16.3-2 [814 kB] Get:20 http://mirror.einval.org/debian sid/main arm64 autopoint all 0.21-4 [510 kB] Get:21 http://mirror.einval.org/debian sid/main arm64 gcc-10-i686-linux-gnu-base arm64 10.2.1-6cross1 [202 kB] Get:22 http://mirror.einval.org/debian sid/main arm64 cpp-10-i686-linux-gnu arm64 10.2.1-6cross1 [46.1 MB] Get:23 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sid/main arm64 g++-10-i686-linux-gnu arm64 10.2.1-6cross1 [49.2 MB] Get:43 http://mirror.einval.org/debian sid/main arm64 g++-i686-linux-gnu arm64 4:10.2.1-1 [1176 B] Get:44 http://mirror.einval.org/debian sid/main arm64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:45 http://mirror.einval.org/debian sid/main arm64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:46 http://mirror.einval.org/debian sid/main arm64 libicu67 arm64 67.1-6 [8468 kB] Get:47 http://mirror.einval.org/debian sid/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get:48 http://mirror.einval.org/debian sid/main arm64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:49 http://mirror.einval.org/debian sid/main arm64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:50 http://mirror.einval.org/debian sid/main arm64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:51 http://mirror.einval.org/debian sid/main arm64 libxml-libxml-perl arm64 2.0134+dfsg-2+b1 [326 kB] Get:52 http://mirror.einval.org/debian sid/main arm64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:53 http://mirror.einval.org/debian sid/main arm64 libyaml-perl all 1.30-1 [67.7 kB] Get:54 http://mirror.einval.org/debian sid/main arm64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:55 http://mirror.einval.org/debian sid/main arm64 libfile-which-perl all 1.23-1 [16.6 kB] Get:56 http://mirror.einval.org/debian sid/main arm64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:57 http://mirror.einval.org/debian sid/main arm64 libdebian-dpkgcross-perl all 2.6.18+nmu1 [30.5 kB] Get:58 http://mirror.einval.org/debian sid/main arm64 dpkg-cross all 2.6.18+nmu1 [41.6 kB] Get:59 http://mirror.einval.org/debian sid/main arm64 crossbuild-essential-i386 all 12.9 [6704 B] Get:60 http://mirror.einval.org/debian sid/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get:61 http://mirror.einval.org/debian sid/main arm64 libtool all 2.4.6-15 [513 kB] Get:62 http://mirror.einval.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB] Get:63 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[49.6 kB] Get:74 http://mirror.einval.org/debian sid/main i386 libcrypt1 i386 1:4.4.18-4 [97.2 kB] Get:75 http://mirror.einval.org/debian sid/main i386 libc6 i386 2.31-12 [2756 kB] Get:76 http://mirror.einval.org/debian sid/main i386 libasan6 i386 10.2.1-6 [1930 kB] Get:77 http://mirror.einval.org/debian sid/main i386 libatomic1 i386 10.2.1-6 [9508 B] Get:78 http://mirror.einval.org/debian sid/main i386 linux-libc-dev i386 5.10.40-1 [1348 kB] Get:79 http://mirror.einval.org/debian sid/main i386 libcrypt-dev i386 1:4.4.18-4 [116 kB] Get:80 http://mirror.einval.org/debian sid/main i386 libcom-err2 i386 1.46.2-2 [74.6 kB] Get:81 http://mirror.einval.org/debian sid/main i386 libkrb5support0 i386 1.18.3-5 [68.4 kB] Get:82 http://mirror.einval.org/debian sid/main i386 libk5crypto3 i386 1.18.3-5 [117 kB] Get:83 http://mirror.einval.org/debian sid/main i386 libkeyutils1 i386 1.6.1-2 [15.9 kB] Get:84 http://mirror.einval.org/debian sid/main i386 libssl1.1 i386 1.1.1k-1 [1550 kB] Get:85 http://mirror.einval.org/debian sid/main i386 libkrb5-3 i386 1.18.3-5 [390 kB] Get:86 http://mirror.einval.org/debian sid/main i386 libgssapi-krb5-2 i386 1.18.3-5 [176 kB] Get:87 http://mirror.einval.org/debian sid/main i386 libtirpc3 i386 1.3.1-1 [90.8 kB] Get:88 http://mirror.einval.org/debian sid/main i386 libnsl2 i386 1.3.0-2 [42.2 kB] Get:89 http://mirror.einval.org/debian sid/main i386 libtirpc-dev i386 1.3.1-1 [201 kB] Get:90 http://mirror.einval.org/debian sid/main i386 libnsl-dev i386 1.3.0-2 [70.6 kB] Get:91 http://mirror.einval.org/debian sid/main i386 libc6-dev i386 2.31-12 [3776 kB] Get:92 http://mirror.einval.org/debian sid/main i386 libgomp1 i386 10.2.1-6 [106 kB] Get:93 http://mirror.einval.org/debian sid/main i386 libitm1 i386 10.2.1-6 [28.6 kB] Get:94 http://mirror.einval.org/debian sid/main i386 libstdc++6 i386 10.2.1-6 [527 kB] Get:95 http://mirror.einval.org/debian sid/main i386 libubsan1 i386 10.2.1-6 [752 kB] Get:96 http://mirror.einval.org/debian sid/main i386 libquadmath0 i386 10.2.1-6 [228 kB] Get:97 http://mirror.einval.org/debian sid/main i386 libgcc-10-dev i386 10.2.1-6 [2324 kB] Get:98 http://mirror.einval.org/debian sid/main i386 libstdc++-10-dev i386 10.2.1-6 [1786 kB] Get:99 http://mirror.einval.org/debian sid/main i386 zlib1g i386 1:1.2.11.dfsg-2 [93.1 kB] Get:100 http://mirror.einval.org/debian sid/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 201 MB in 2s (86.8 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 12271 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_arm64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../01-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../03-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../05-liblocale-gettext-perl_1.07-4+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... 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Selecting previously unselected package sbuild-build-depends-main-dummy:i386. Preparing to unpack .../99-sbuild-build-depends-main-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:arm64 (1.5.3-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:arm64 (67.1-6) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up binutils-i686-linux-gnu (2.35.2-2) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up linux-libc-dev:i386 (5.10.40-1) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libyaml-perl (1.30-1) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up gcc-10-base:i386 (10.2.1-6) ... Setting up linux-libc-dev-i386-cross (5.10.13-1cross4) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu1) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up gcc-10-cross-base (10.2.1-6cross1) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libc6-i386-cross (2.31-9cross4) ... Setting up libsub-override-perl (0.09-2) ... Setting up gcc-10-i686-linux-gnu-base:arm64 (10.2.1-6cross1) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libquadmath0-i386-cross (10.2.1-6cross1) ... Setting up libelf1:arm64 (0.183-3) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libatomic1-i386-cross (10.2.1-6cross1) ... Setting up m4 (1.4.18-5) ... Setting up libgomp1-i386-cross (10.2.1-6cross1) ... Setting up libc6-dev-i386-cross (2.31-9cross4) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libgcc-s1-i386-cross (10.2.1-6cross1) ... Setting up libasan6-i386-cross (10.2.1-6cross1) ... Setting up cpp-10-i686-linux-gnu (10.2.1-6cross1) ... Setting up libitm1-i386-cross (10.2.1-6cross1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-6) ... Setting up cpp-i686-linux-gnu (4:10.2.1-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++6-i386-cross (10.2.1-6cross1) ... Setting up dh-autoreconf (20) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.3.4) ... Setting up libubsan1-i386-cross (10.2.1-6cross1) ... Setting up libgcc-10-dev-i386-cross (10.2.1-6cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libstdc++-10-dev-i386-cross (10.2.1-6cross1) ... Setting up gcc-10-i686-linux-gnu (10.2.1-6cross1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up gcc-i686-linux-gnu (4:10.2.1-1) ... Setting up g++-10-i686-linux-gnu (10.2.1-6cross1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu1) ... Setting up g++-i686-linux-gnu (4:10.2.1-1) ... Setting up dpkg-cross (2.6.18+nmu1) ... Setting up crossbuild-essential-i386 (12.9) ... Setting up libgcc-s1:i386 (10.2.1-6) ... Setting up libcrypt1:i386 (1:4.4.18-4) ... Setting up libc6:i386 (2.31-12) ... Setting up libcrypt-dev:i386 (1:4.4.18-4) ... Setting up libstdc++6:i386 (10.2.1-6) ... Setting up libitm1:i386 (10.2.1-6) ... Setting up libkeyutils1:i386 (1.6.1-2) ... Setting up libssl1.1:i386 (1.1.1k-1) ... Setting up zlib1g:i386 (1:1.2.11.dfsg-2) ... Setting up libcom-err2:i386 (1.46.2-2) ... Setting up libgomp1:i386 (10.2.1-6) ... Setting up libasan6:i386 (10.2.1-6) ... Setting up libkrb5support0:i386 (1.18.3-5) ... Setting up libquadmath0:i386 (10.2.1-6) ... Setting up libatomic1:i386 (10.2.1-6) ... Setting up libk5crypto3:i386 (1.18.3-5) ... Setting up libubsan1:i386 (10.2.1-6) ... Setting up libkrb5-3:i386 (1.18.3-5) ... Setting up libgcc-10-dev:i386 (10.2.1-6) ... Setting up libgssapi-krb5-2:i386 (1.18.3-5) ... Setting up libtirpc3:i386 (1.3.1-1) ... Setting up libtirpc-dev:i386 (1.3.1-1) ... Setting up libnsl2:i386 (1.3.0-2) ... Setting up libnsl-dev:i386 (1.3.0-2) ... Setting up libc6-dev:i386 (2.31-12) ... Setting up libstdc++-10-dev:i386 (10.2.1-6) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-2) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.31-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.9.0-0.bpo.2-arm64 #1 SMP Debian 5.9.6-1~bpo10+1 (2020-11-19) arm64 (aarch64) Toolchain package versions: binutils_2.35.2-2 dpkg-dev_1.20.9 g++-10_10.2.1-6 gcc-10_10.2.1-6 libc6-dev_2.31-12 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-i386-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-i386-cross_10.2.1-6cross1 linux-libc-dev_5.10.40-1 Package versions: adduser_3.118 apt_2.2.4 autoconf_2.69-14 automake_1:1.16.3-2 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_11.1 base-passwd_3.5.50 bash_5.1-3 binutils_2.35.2-2 binutils-aarch64-linux-gnu_2.35.2-2 binutils-common_2.35.2-2 binutils-i686-linux-gnu_2.35.2-2 bsdextrautils_2.36.1-7 bsdutils_1:2.36.1-7 build-essential_12.9 bzip2_1.0.8-4 coreutils_8.32-4 cpp_4:10.2.1-1 cpp-10_10.2.1-6 cpp-10-i686-linux-gnu_10.2.1-6cross1 cpp-i686-linux-gnu_4:10.2.1-1 cross-config_2.6.18+nmu1 crossbuild-essential-i386_12.9 dash_0.5.11+git20210120+802ebd4-1 debconf_1.5.77 debhelper_13.3.4 debian-archive-keyring_2021.1.1 debianutils_4.11.2 dh-autoreconf_20 dh-strip-nondeterminism_1.12.0-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu1 dpkg-dev_1.20.9 dwz_0.14-1 fakeroot_1.25.3-1.1 file_1:5.39-3 findutils_4.8.0-1 g++_4:10.2.1-1 g++-10_10.2.1-6 g++-10-i686-linux-gnu_10.2.1-6cross1 g++-i686-linux-gnu_4:10.2.1-1 gcc_4:10.2.1-1 gcc-10_10.2.1-6 gcc-10-base_10.2.1-6 gcc-10-cross-base_10.2.1-6cross1 gcc-10-i686-linux-gnu_10.2.1-6cross1 gcc-10-i686-linux-gnu-base_10.2.1-6cross1 gcc-i686-linux-gnu_4:10.2.1-1 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 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libpcre3_2:8.39-13 libperl5.32_5.32.1-4 libpipeline1_1.5.3-1 libquadmath0_10.2.1-6 libquadmath0-i386-cross_10.2.1-6cross1 libseccomp2_2.5.1-1 libselinux1_3.1-3 libsemanage-common_3.1-1 libsemanage1_3.1-1+b2 libsepol1_3.1-1 libsigsegv2_2.13-1 libsmartcols1_2.36.1-7 libssl1.1_1.1.1k-1 libstdc++-10-dev_10.2.1-6 libstdc++-10-dev-i386-cross_10.2.1-6cross1 libstdc++6_10.2.1-6 libstdc++6-i386-cross_10.2.1-6cross1 libsub-override-perl_0.09-2 libsystemd0_247.3-5 libtasn1-6_4.16.0-2 libtinfo6_6.2+20201114-2 libtirpc-common_1.3.1-1 libtirpc-dev_1.3.1-1 libtirpc3_1.3.1-1 libtool_2.4.6-15 libtsan0_10.2.1-6 libubsan1_10.2.1-6 libubsan1-i386-cross_10.2.1-6cross1 libuchardet0_0.0.7-1 libudev1_247.3-5 libunistring2_0.9.10-4 libuuid1_2.36.1-7 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-6.7 libxxhash0_0.8.0-2 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-2.1 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http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/spaln Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/spaln Vcs-Git: https://salsa.debian.org/med-team/spaln.git Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: spaln deb science optional arch=any spaln-data deb science optional arch=all Checksums-Sha1: f58464a240ccd32adbc63aea9f87423fa4f42f74 19684856 spaln_2.4.1+dfsg.orig.tar.xz 93a46eb1d3ce903c78696e0e7b9ebc92d325595d 4112 spaln_2.4.1+dfsg-3.debian.tar.xz Checksums-Sha256: 06623ccee3583a4b91cba3cb814cbeba67dad962efe1e420fd4e1f3860bd89ff 19684856 spaln_2.4.1+dfsg.orig.tar.xz 49537833db0600a8a9f1c5ce6dfaad84cd562b6d29f33f0ad59ca2b5edf20565 4112 spaln_2.4.1+dfsg-3.debian.tar.xz Files: b7c79a3f758b08c91a2ed45115a823fc 19684856 spaln_2.4.1+dfsg.orig.tar.xz 9f2151f0800dc4403b4a699be70c52c8 4112 spaln_2.4.1+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/0mHoRHHRpbGxlQGRl 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F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./spaln_2.4.1+dfsg-3.dsc dpkg-source: info: extracting spaln in /<> dpkg-source: info: unpacking spaln_2.4.1+dfsg.orig.tar.xz dpkg-source: info: unpacking spaln_2.4.1+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying portability.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ ulimit -c --------- 0 I: Finished running 'ulimit -c'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmutg PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=crossqa-sid SCHROOT_CHROOT_NAME=crossqa-sid SCHROOT_COMMAND=env SCHROOT_GID=1002 SCHROOT_GROUP=helmutg SCHROOT_SESSION_ID=crossqa-sid-8a938aaf-9d2a-4515-be05-50d4815fbab4 SCHROOT_UID=1002 SCHROOT_USER=helmutg SHELL=/bin/sh USER=helmutg dpkg-buildpackage ----------------- Command: dpkg-buildpackage -ai386 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package spaln dpkg-buildpackage: info: source version 2.4.1+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Helmut Grohne dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' [ -r src/Makefile ] && make -C src clean || true rm -f src/dbs.h src/iolib.h src/*.o src/*.a src/Makefile make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/spaln.substvars debian/spaln-data.substvars debian/files rm -fr -- debian/spaln/ debian/tmp/ debian/spaln-data/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' cd src && AR="i686-linux-gnu-ar rc" ./configure --exec_prefix=/usr/bin OK, CXX=i686-linux-gnu-g++ CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto 1 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto binaries install to /usr/bin tables install to /usr/share/spaln/table alndbs install to /usr/share/spaln/seqdb wrote Makefile wrote files OK. try make and make install. good luck! make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' /usr/bin/make table_dir=/usr/share/spaln/table alndbs_dir=/usr/share/spaln/seqdb exec_prefix=/usr/bin -C src make[2]: Entering directory '/<>/src' i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c spaln.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from spaln.cc:25: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from spaln.cc:25: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c blksrc.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from blksrc.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from blksrc.cc:22: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ blksrc.cc: In function ‘void idx2SeqLenStat(const char*, SeqLenStat&)’: blksrc.cc:1003:19: warning: comparison of integer expressions of different signedness: ‘INT’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare] 1003 | if (sls.maxv < widx->seqlen) sls.maxv = widx->seqlen; | ~~~~~~~~~^~~~~~~~~~~~~~ blksrc.cc: In member function ‘int SrchBlk::FindHsp(BPAIR*)’: blksrc.cc:2528:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘INT’ {aka ‘unsigned int’} [-Wsign-compare] 2528 | if (curgr - gener >= OutPrm.MaxOut - 1) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ blksrc.cc: In member function ‘int SrchBlk::TestOutput(int)’: blksrc.cc:2733:13: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 11 has type ‘int’ [-Wformat=] 2733 | printf(ofmt, query->sqname(), dir[d / 2], query->left, query->right, cid, p, q, | ^~~~ ...... 2736 | bh4->as[d][bh4->maxs[d]] - query->at(0), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | int blksrc.cc:2733:13: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 12 has type ‘int’ [-Wformat=] i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c aln2.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from aln2.cc:23: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from aln2.cc:23: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c dbs.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from dbs.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from dbs.cc:22: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ dbs.cc: In member function ‘Seq* Seq::getdbseq(DbsDt*, const char*, int, bool)’: dbs.cc:821:9: warning: comparison of integer expressions of different signedness: ‘INT’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare] 821 | if (n > record->seqlen) n = record->seqlen; | ~~^~~~~~~~~~~~~~~~ dbs.cc:826:9: warning: comparison of integer expressions of different signedness: ‘INT’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare] 826 | if (n == record->seqlen) break; | ~~^~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c gaps.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from gaps.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from gaps.cc:22: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c codepot.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from codepot.cc:26: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from codepot.cc:26: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c divseq.cc In file included from stdtype.h:34, from cmn.h:25, from divseq.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from divseq.h:26, from divseq.cc:23: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c gsinfo.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from gsinfo.cc:23: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from gsinfo.cc:23: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2b1.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from fwd2b1.cc:28: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from fwd2b1.cc:28: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2d1.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from fwd2d1.cc:29: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from fwd2d1.cc:29: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2h1.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from fwd2h1.cc:29: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from fwd2h1.cc:29: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2s1.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from fwd2s1.cc:26: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from fwd2s1.cc:26: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c bitpat.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from bitpat.cc:23: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from bitpat.cc:23: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c seq.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from seq.cc:23: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from seq.cc:23: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ seq.cc: In member function ‘Seq* Seq::aliaseq(Seq*, bool)’: seq.cc:408:32: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘class Seq’ with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess] 408 | memcpy(dest, this, sizeof(Seq)); | ^ In file included from seq.cc:23: seq.h:252:7: note: ‘class Seq’ declared here 252 | class Seq { | ^~~ seq.cc: In member function ‘void Seq::seqalloc(int, int, bool)’: seq.cc:477:26: warning: catching polymorphic type ‘class std::bad_alloc’ by value [-Wcatch-value=] 477 | } catch (std::bad_alloc ba) { | ^~ seq.cc: In member function ‘CHAR* Seq::seq_realloc()’: seq.cc:499:26: warning: catching polymorphic type ‘class std::bad_alloc’ by value [-Wcatch-value=] 499 | } catch (std::bad_alloc ba) { | ^~ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c simmtx.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from simmtx.cc:25: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from simmtx.cc:25: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c sqpr.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from divseq.h:26, from sqpr.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from divseq.h:26, from sqpr.cc:22: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c utilseq.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from utilseq.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from utilseq.cc:22: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c vmf.cc In file included from stdtype.h:34, from cmn.h:25, from vmf.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c wln.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from wln.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from wln.cc:22: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c boyer_moore.cc In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from boyer_moore.h:4, from boyer_moore.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from boyer_moore.h:4, from boyer_moore.cc:22: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ i686-linux-gnu-ar rc sblib.a aln2.o dbs.o gaps.o codepot.o divseq.o gsinfo.o \ fwd2b1.o fwd2d1.o fwd2h1.o fwd2s1.o bitpat.o \ seq.o simmtx.o sqpr.o utilseq.o vmf.o wln.o boyer_moore.o i686-linux-gnu-ranlib sblib.a i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c clib.cc In file included from clib.cc:34: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c iolib.cc In file included from iolib.cc:33: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c mfile.cc In file included from stdtype.h:34, from mfile.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c sets.cc In file included from stdtype.h:34, from sets.cc:22: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c supprime.cc In file included from stdtype.h:34, from supprime.cc:13: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ i686-linux-gnu-ar rc clib.a clib.o iolib.o mfile.o sets.o supprime.o i686-linux-gnu-ranlib clib.a i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o spaln spaln.o blksrc.o sblib.a clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o sortgrcd sortgrcd.cc sblib.a clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from aln.h:26, from sortgrcd.h:26, from sortgrcd.cc:26: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from aln.h:26, from sortgrcd.h:26, from sortgrcd.cc:26: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ sortgrcd.cc: In function ‘int count_record(const char*, const char*, size_t)’: sortgrcd.cc:994:11: warning: ISO C++ forbids variable length array ‘buf’ [-Wvla] 994 | char buf[rcdsize]; | ^~~ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o makmdm makmdm.cc clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from makmdm.cc:28: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from makmdm.cc:28: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ makmdm.cc: In function ‘void exp_qdt(double (*)[20], double*, double, int)’: makmdm.cc:396:15: warning: unused variable ‘q’ [-Wunused-variable] 396 | static double q[2][20][20] = { | ^ makmdm.cc: At global scope: makmdm.cc:396:15: warning: ‘q’ defined but not used [-Wunused-variable] i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o makdbs makdbs.cc sblib.a clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -Wl,--as-needed -flto In file included from stdtype.h:34, from cmn.h:25, from seq.h:25, from makdbs.h:25, from makdbs.cc:24: clib.h:1076:51: warning: extra ‘;’ [-Wpedantic] 1076 | inline double inverse(double x) {return (1. / x);}; | ^ In file included from seq.h:62, from makdbs.h:25, from makdbs.cc:24: codepot.h:171:2: warning: extra ‘;’ [-Wpedantic] 171 | }; | ^ make[2]: Leaving directory '/<>/src' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/spaln.substvars rm -fr -- debian/.debhelper/generated/spaln/ debian/spaln/ debian/tmp/ debian/rules override_dh_auto_install make[1]: Entering directory '/<>' /usr/bin/make table_dir=/<>/debian/spaln-data//usr/share/spaln/table alndbs_dir=/<>/debian/spaln-data//usr/share/spaln/seqdb exec_prefix=/<>/debian/spaln//usr/bin -C src install make[2]: Entering directory '/<>/src' test -d /<>/debian/spaln//usr/bin || mkdir -p /<>/debian/spaln//usr/bin cp spaln sortgrcd makmdm makdbs /<>/debian/spaln//usr/bin test -d /<>/debian/spaln-data//usr/share/spaln/table || mkdir -p /<>/debian/spaln-data//usr/share/spaln/table ./makmdm /<>/debian/spaln-data//usr/share/spaln/table ./makmdm: 1: Syntax error: "(" unexpected make[2]: *** [Makefile:60: install] Error 2 make[2]: Leaving directory '/<>/src' make[1]: *** [debian/rules:29: override_dh_auto_install] Error 2 make[1]: Leaving directory '/<>' make: *** [debian/rules:20: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2021-06-15T00:37:28Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 113064 Build-Time: 157 Distribution: unstable Fail-Stage: build Foreign Architectures: i386 Host Architecture: i386 Install-Time: 58 Job: spaln_2.4.1+dfsg-3 Machine Architecture: arm64 Package: spaln Package-Time: 247 Source-Version: 2.4.1+dfsg-3 Space: 113064 Status: attempted Version: 2.4.1+dfsg-3 -------------------------------------------------------------------------------- Finished at 2021-06-15T00:37:28Z Build needed 00:04:07, 113064k disk space