sbuild (Debian sbuild) 0.78.1 (09 February 2019) on mjolnir +==============================================================================+ | spaln 2.4.7+dfsg-1 (i386) Thu, 17 Feb 2022 20:27:40 +0000 | +==============================================================================+ Package: spaln Version: 2.4.7+dfsg-1 Source Version: 2.4.7+dfsg-1 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/crossqa-sid-2502afce-d123-48bb-8062-b3783e517571' with '<>' I: NOTICE: Log filtering will replace 'build/spaln-XPf36B/resolver-KqfPIe' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian sid InRelease [165 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:2 http://mirror.einval.org/debian sid/main Sources.diff/Index [63.6 kB] Ign:2 http://mirror.einval.org/debian sid/main Sources.diff/Index Ign:3 http://mirror.einval.org/debian sid/main arm64 Packages.diff/Index Get:4 http://mirror.einval.org/debian sid/main i386 Packages [8887 kB] Get:5 http://mirror.einval.org/debian sid/main Sources [9562 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 Packages [8835 kB] Fetched 27.4 MB in 7s (3824 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'spaln' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/spaln.git Please use: git clone https://salsa.debian.org/med-team/spaln.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 19.7 MB of source archives. Get:1 http://mirror.einval.org/debian sid/main spaln 2.4.7+dfsg-1 (dsc) [2038 B] Get:2 http://mirror.einval.org/debian sid/main spaln 2.4.7+dfsg-1 (tar) [19.7 MB] Get:3 http://mirror.einval.org/debian sid/main spaln 2.4.7+dfsg-1 (diff) [5492 B] Fetched 19.7 MB in 0s (55.7 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/spaln-XPf36B/spaln-2.4.7+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/spaln-XPf36B' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [411 B] Get:5 copy:/<>/apt_archive ./ Packages [497 B] Fetched 1865 B in 0s (42.6 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-11-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-11-i686-linux-gnu g++-i686-linux-gnu gcc-11-base:i386 gcc-11-cross-base gcc-11-i686-linux-gnu gcc-11-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:i386 libgcc-11-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu67 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:i386 libnsl2:i386 libpipeline1 libquadmath0:i386 libquadmath0-i386-cross libsigsegv2 libssl1.1:i386 libstdc++-11-dev:i386 libstdc++-11-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-11-locales cpp-doc dh-make binutils-multiarch g++-11-multilib-i686-linux-gnu gcc-11-doc gcc-11-multilib-i686-linux-gnu manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:i386 libc-l10n:i386 locales:i386 libnss-nis:i386 libnss-nisplus:i386 manpages-dev:i386 krb5-doc:i386 krb5-user:i386 libstdc++-11-doc:i386 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:i386 libarchive-cpio-perl krb5-locales:i386 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-11-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-11-i686-linux-gnu g++-i686-linux-gnu gcc-11-base:i386 gcc-11-cross-base gcc-11-i686-linux-gnu gcc-11-i686-linux-gnu-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:i386 libasan6-i386-cross libatomic1:i386 libatomic1-i386-cross libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:i386 libgcc-11-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libicu67 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:i386 libnsl2:i386 libpipeline1 libquadmath0:i386 libquadmath0-i386-cross libsigsegv2 libssl1.1:i386 libstdc++-11-dev:i386 libstdc++-11-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtirpc-dev:i386 libtirpc3:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:i386 linux-libc-dev-i386-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:i386 sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 0 upgraded, 100 newly installed, 0 to remove and 0 not upgraded. Need to get 85.2 MB of archives. After this operation, 328 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://mirror.einval.org/debian sid/main arm64 liblocale-gettext-perl arm64 1.07-4+b2 [18.9 kB] Get:3 http://mirror.einval.org/debian sid/main arm64 sensible-utils all 0.0.17 [21.5 kB] Get:4 http://mirror.einval.org/debian sid/main arm64 libmagic-mgc arm64 1:5.41-2 [295 kB] Get:5 http://mirror.einval.org/debian sid/main arm64 libmagic1 arm64 1:5.41-2 [124 kB] Get:6 http://mirror.einval.org/debian sid/main arm64 file arm64 1:5.41-2 [66.8 kB] Get:7 http://mirror.einval.org/debian sid/main arm64 gettext-base arm64 0.21-4 [173 kB] Get:8 http://mirror.einval.org/debian sid/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:9 http://mirror.einval.org/debian sid/main arm64 groff-base arm64 1.22.4-8 [882 kB] Get:10 http://mirror.einval.org/debian sid/main arm64 bsdextrautils arm64 2.37.3-1+b1 [145 kB] Get:11 http://mirror.einval.org/debian sid/main arm64 libpipeline1 arm64 1.5.5-1 [35.8 kB] Get:12 http://mirror.einval.org/debian sid/main arm64 man-db arm64 2.10.1-1 [1387 kB] Get:13 http://mirror.einval.org/debian sid/main arm64 ucf all 3.0043 [74.0 kB] Get:14 http://mirror.einval.org/debian sid/main arm64 libsigsegv2 arm64 2.14-1 [37.0 kB] Get:15 http://mirror.einval.org/debian sid/main arm64 m4 arm64 1.4.18-5 [199 kB] Get:16 http://mirror.einval.org/debian sid/main arm64 autoconf all 2.71-2 [343 kB] Get:17 http://mirror.einval.org/debian sid/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:18 http://mirror.einval.org/debian sid/main arm64 automake all 1:1.16.5-1.1 [823 kB] Get:19 http://mirror.einval.org/debian sid/main arm64 autopoint all 0.21-4 [510 kB] Get:20 http://mirror.einval.org/debian sid/main arm64 gcc-11-i686-linux-gnu-base arm64 11.2.0-16cross1 [207 kB] Get:21 http://mirror.einval.org/debian sid/main arm64 cpp-11-i686-linux-gnu arm64 11.2.0-16cross1 [7860 kB] Get:22 http://mirror.einval.org/debian sid/main arm64 cpp-i686-linux-gnu arm64 4:11.2.0-2 [17.0 kB] Get:23 http://mirror.einval.org/debian sid/main arm64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:24 http://mirror.einval.org/debian sid/main arm64 binutils-i686-linux-gnu arm64 2.38-1 [2324 kB] Get:25 http://mirror.einval.org/debian sid/main arm64 gcc-11-cross-base all 11.2.0-16cross1 [203 kB] Get:26 http://mirror.einval.org/debian sid/main arm64 libc6-i386-cross all 2.33-1cross1 [1526 kB] Get:27 http://mirror.einval.org/debian sid/main arm64 libgcc-s1-i386-cross all 11.2.0-16cross1 [49.9 kB] Get:28 http://mirror.einval.org/debian sid/main arm64 libgomp1-i386-cross all 11.2.0-16cross1 [108 kB] Get:29 http://mirror.einval.org/debian sid/main arm64 libitm1-i386-cross all 11.2.0-16cross1 [27.3 kB] Get:30 http://mirror.einval.org/debian sid/main arm64 libatomic1-i386-cross all 11.2.0-16cross1 [7552 B] Get:31 http://mirror.einval.org/debian sid/main arm64 libasan6-i386-cross all 11.2.0-16cross1 [1926 kB] Get:32 http://mirror.einval.org/debian sid/main arm64 libstdc++6-i386-cross all 11.2.0-16cross1 [575 kB] Get:33 http://mirror.einval.org/debian sid/main arm64 libubsan1-i386-cross all 11.2.0-16cross1 [812 kB] Get:34 http://mirror.einval.org/debian sid/main arm64 libquadmath0-i386-cross all 11.2.0-16cross1 [226 kB] Get:35 http://mirror.einval.org/debian sid/main arm64 libgcc-11-dev-i386-cross all 11.2.0-16cross1 [2331 kB] Get:36 http://mirror.einval.org/debian sid/main arm64 gcc-11-i686-linux-gnu arm64 11.2.0-16cross1 [15.6 MB] Get:37 http://mirror.einval.org/debian sid/main arm64 gcc-i686-linux-gnu arm64 4:11.2.0-2 [1452 B] Get:38 http://mirror.einval.org/debian sid/main arm64 linux-libc-dev-i386-cross all 5.15.5-1cross1 [1576 kB] Get:39 http://mirror.einval.org/debian sid/main arm64 libc6-dev-i386-cross all 2.33-1cross1 [2170 kB] Get:40 http://mirror.einval.org/debian sid/main arm64 libstdc++-11-dev-i386-cross all 11.2.0-16cross1 [2012 kB] Get:41 http://mirror.einval.org/debian sid/main arm64 g++-11-i686-linux-gnu arm64 11.2.0-16cross1 [8676 kB] Get:42 http://mirror.einval.org/debian sid/main arm64 g++-i686-linux-gnu arm64 4:11.2.0-2 [1168 B] Get:43 http://mirror.einval.org/debian sid/main arm64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:44 http://mirror.einval.org/debian sid/main arm64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:45 http://mirror.einval.org/debian sid/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get:46 http://mirror.einval.org/debian sid/main arm64 libxml2 arm64 2.9.12+dfsg-5+b1 [633 kB] Get:47 http://mirror.einval.org/debian sid/main arm64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:48 http://mirror.einval.org/debian sid/main arm64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:49 http://mirror.einval.org/debian sid/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:50 http://mirror.einval.org/debian sid/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1 [326 kB] Get:51 http://mirror.einval.org/debian sid/main arm64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:52 http://mirror.einval.org/debian sid/main arm64 libyaml-perl all 1.30-1 [67.7 kB] Get:53 http://mirror.einval.org/debian sid/main arm64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:54 http://mirror.einval.org/debian sid/main arm64 libfile-which-perl all 1.23-1 [16.6 kB] Get:55 http://mirror.einval.org/debian sid/main arm64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:56 http://mirror.einval.org/debian sid/main arm64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:57 http://mirror.einval.org/debian sid/main arm64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:58 http://mirror.einval.org/debian sid/main arm64 crossbuild-essential-i386 all 12.9 [6704 B] Get:59 http://mirror.einval.org/debian sid/main arm64 libdebhelper-perl all 13.6 [193 kB] Get:60 http://mirror.einval.org/debian sid/main arm64 libtool all 2.4.6-15 [513 kB] Get:61 http://mirror.einval.org/debian sid/main arm64 dh-autoreconf all 20 [17.1 kB] Get:62 http://mirror.einval.org/debian sid/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:63 http://mirror.einval.org/debian sid/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get:64 http://mirror.einval.org/debian sid/main arm64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:65 http://mirror.einval.org/debian sid/main arm64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:66 http://mirror.einval.org/debian sid/main arm64 libelf1 arm64 0.186-1 [177 kB] Get:67 http://mirror.einval.org/debian sid/main arm64 dwz arm64 0.14-1 [90.0 kB] Get:68 http://mirror.einval.org/debian sid/main arm64 gettext arm64 0.21-4 [1261 kB] Get:69 http://mirror.einval.org/debian sid/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:70 http://mirror.einval.org/debian sid/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:71 http://mirror.einval.org/debian sid/main arm64 debhelper all 13.6 [1054 kB] Get:72 http://mirror.einval.org/debian sid/main i386 gcc-11-base i386 11.2.0-16 [207 kB] Get:73 http://mirror.einval.org/debian sid/main i386 libgcc-s1 i386 11.2.0-16 [49.9 kB] Get:74 http://mirror.einval.org/debian sid/main i386 libc6 i386 2.33-6 [2786 kB] Get:75 http://mirror.einval.org/debian sid/main i386 libasan6 i386 11.2.0-16 [1933 kB] Get:76 http://mirror.einval.org/debian sid/main i386 libatomic1 i386 11.2.0-16 [7760 B] Get:77 http://mirror.einval.org/debian sid/main i386 linux-libc-dev i386 5.16.7-2 [1495 kB] Get:78 http://mirror.einval.org/debian sid/main i386 libcrypt1 i386 1:4.4.27-1.1 [99.5 kB] Get:79 http://mirror.einval.org/debian sid/main i386 libcrypt-dev i386 1:4.4.27-1.1 [129 kB] Get:80 http://mirror.einval.org/debian sid/main i386 libcom-err2 i386 1.46.5-2 [76.1 kB] Get:81 http://mirror.einval.org/debian sid/main i386 libkrb5support0 i386 1.18.3-7 [68.6 kB] Get:82 http://mirror.einval.org/debian sid/main i386 libk5crypto3 i386 1.18.3-7 [117 kB] Get:83 http://mirror.einval.org/debian sid/main i386 libkeyutils1 i386 1.6.1-2 [15.9 kB] Get:84 http://mirror.einval.org/debian sid/main i386 libssl1.1 i386 1.1.1m-1 [1550 kB] Get:85 http://mirror.einval.org/debian sid/main i386 libkrb5-3 i386 1.18.3-7 [390 kB] Get:86 http://mirror.einval.org/debian sid/main i386 libgssapi-krb5-2 i386 1.18.3-7 [176 kB] Get:87 http://mirror.einval.org/debian sid/main i386 libtirpc3 i386 1.3.2-2 [91.3 kB] Get:88 http://mirror.einval.org/debian sid/main i386 libnsl2 i386 1.3.0-2 [42.2 kB] Get:89 http://mirror.einval.org/debian sid/main i386 libtirpc-dev i386 1.3.2-2 [201 kB] Get:90 http://mirror.einval.org/debian sid/main i386 libnsl-dev i386 1.3.0-2 [70.6 kB] Get:91 http://mirror.einval.org/debian sid/main i386 libc6-dev i386 2.33-6 [2172 kB] Get:92 http://mirror.einval.org/debian sid/main i386 libgomp1 i386 11.2.0-16 [111 kB] Get:93 http://mirror.einval.org/debian sid/main i386 libitm1 i386 11.2.0-16 [27.8 kB] Get:94 http://mirror.einval.org/debian sid/main i386 libstdc++6 i386 11.2.0-16 [617 kB] Get:95 http://mirror.einval.org/debian sid/main i386 libubsan1 i386 11.2.0-16 [813 kB] Get:96 http://mirror.einval.org/debian sid/main i386 libquadmath0 i386 11.2.0-16 [226 kB] Get:97 http://mirror.einval.org/debian sid/main i386 libgcc-11-dev i386 11.2.0-16 [2334 kB] Get:98 http://mirror.einval.org/debian sid/main i386 libstdc++-11-dev i386 11.2.0-16 [2028 kB] Get:99 http://mirror.einval.org/debian sid/main i386 zlib1g i386 1:1.2.11.dfsg-2 [93.1 kB] Get:100 http://mirror.einval.org/debian sid/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 85.2 MB in 1s (79.6 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 12377 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-4+b2_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.41-2_arm64.deb ... Unpacking libmagic-mgc (1:5.41-2) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../03-libmagic1_1%3a5.41-2_arm64.deb ... Unpacking libmagic1:arm64 (1:5.41-2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.41-2_arm64.deb ... Unpacking file (1:5.41-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... 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Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.41-2) ... Setting up libyaml-perl (1.30-1) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up linux-libc-dev-i386-cross (5.15.5-1cross1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libsigsegv2:arm64 (2.14-1) ... Setting up autopoint (0.21-4) ... Setting up gcc-11-cross-base (11.2.0-16cross1) ... Setting up sensible-utils (0.0.17) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libc6-i386-cross (2.33-1cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up cpp-i686-linux-gnu (4:11.2.0-2) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libquadmath0-i386-cross (11.2.0-16cross1) ... Setting up libelf1:arm64 (0.186-1) ... Setting up libxml2:arm64 (2.9.12+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4+b2) ... Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libatomic1-i386-cross (11.2.0-16cross1) ... Setting up m4 (1.4.18-5) ... Setting up libgomp1-i386-cross (11.2.0-16cross1) ... Setting up libc6-dev-i386-cross (2.33-1cross1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libgcc-s1-i386-cross (11.2.0-16cross1) ... Setting up libasan6-i386-cross (11.2.0-16cross1) ... Setting up libitm1-i386-cross (11.2.0-16cross1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.71-2) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-8) ... Setting up automake (1:1.16.5-1.1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.10.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++6-i386-cross (11.2.0-16cross1) ... Setting up dh-autoreconf (20) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.6) ... Setting up libubsan1-i386-cross (11.2.0-16cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libgcc-11-dev-i386-cross (11.2.0-16cross1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up gcc-11-i686-linux-gnu (11.2.0-16cross1) ... Setting up gcc-i686-linux-gnu (4:11.2.0-2) ... Setting up libstdc++-11-dev-i386-cross (11.2.0-16cross1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up g++-11-i686-linux-gnu (11.2.0-16cross1) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up g++-i686-linux-gnu (4:11.2.0-2) ... Setting up crossbuild-essential-i386 (12.9) ... Setting up libgcc-s1:i386 (11.2.0-16) ... Setting up libc6:i386 (2.33-6) ... Setting up libstdc++6:i386 (11.2.0-16) ... Setting up libitm1:i386 (11.2.0-16) ... Setting up libkeyutils1:i386 (1.6.1-2) ... Setting up libssl1.1:i386 (1.1.1m-1) ... Setting up zlib1g:i386 (1:1.2.11.dfsg-2) ... Setting up libcrypt1:i386 (1:4.4.27-1.1) ... Setting up libcom-err2:i386 (1.46.5-2) ... Setting up libgomp1:i386 (11.2.0-16) ... Setting up libasan6:i386 (11.2.0-16) ... Setting up libkrb5support0:i386 (1.18.3-7) ... Setting up libquadmath0:i386 (11.2.0-16) ... Setting up libatomic1:i386 (11.2.0-16) ... Setting up libk5crypto3:i386 (1.18.3-7) ... Setting up libubsan1:i386 (11.2.0-16) ... Setting up libgcc-11-dev:i386 (11.2.0-16) ... Setting up libcrypt-dev:i386 (1:4.4.27-1.1) ... Setting up libkrb5-3:i386 (1.18.3-7) ... Setting up libgssapi-krb5-2:i386 (1.18.3-7) ... Setting up libtirpc3:i386 (1.3.2-2) ... Setting up libtirpc-dev:i386 (1.3.2-2) ... Setting up libnsl2:i386 (1.3.0-2) ... Setting up libnsl-dev:i386 (1.3.0-2) ... Setting up libc6-dev:i386 (2.33-6) ... Setting up libstdc++-11-dev:i386 (11.2.0-16) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-2) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.33-6) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.9.0-0.bpo.2-arm64 #1 SMP Debian 5.9.6-1~bpo10+1 (2020-11-19) arm64 (aarch64) Toolchain package versions: binutils_2.38-1 dpkg-dev_1.21.1 g++-11_11.2.0-16 gcc-11_11.2.0-16 libc6-dev_2.33-6 libstdc++-11-dev_11.2.0-16 libstdc++-11-dev-i386-cross_11.2.0-16cross1 libstdc++6_11.2.0-16 libstdc++6-i386-cross_11.2.0-16cross1 linux-libc-dev_5.16.7-2 Package versions: adduser_3.118 apt_2.3.15 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4 autotools-dev_20220109.1 base-files_12.2 base-passwd_3.5.52 bash_5.1-6 binutils_2.38-1 binutils-aarch64-linux-gnu_2.38-1 binutils-common_2.38-1 binutils-i686-linux-gnu_2.38-1 bsdextrautils_2.37.3-1+b1 bsdutils_1:2.37.3-1+b1 build-essential_12.9 bzip2_1.0.8-5 coreutils_8.32-4.1 cpp_4:11.2.0-2 cpp-11_11.2.0-16 cpp-11-i686-linux-gnu_11.2.0-16cross1 cpp-i686-linux-gnu_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-i386_12.9 dash_0.5.11+git20210903+057cd650a4ed-3 debconf_1.5.79 debhelper_13.6 debian-archive-keyring_2021.1.1 debianutils_5.7-0.1 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.7-5 dpkg_1.21.1 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.1 dwz_0.14-1 fakeroot_1.27-1 file_1:5.41-2 findutils_4.8.0-1 g++_4:11.2.0-2 g++-11_11.2.0-16 g++-11-i686-linux-gnu_11.2.0-16cross1 g++-i686-linux-gnu_4:11.2.0-2 gcc_4:11.2.0-2 gcc-10-base_10.3.0-14 gcc-11_11.2.0-16 gcc-11-base_11.2.0-16 gcc-11-cross-base_11.2.0-16cross1 gcc-11-i686-linux-gnu_11.2.0-16cross1 gcc-11-i686-linux-gnu-base_11.2.0-16cross1 gcc-i686-linux-gnu_4:11.2.0-2 gettext_0.21-4 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libpam-runtime_1.4.0-11 libpam0g_1.4.0-11 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.34_5.34.0-3 libpipeline1_1.5.5-1 libquadmath0_11.2.0-16 libquadmath0-i386-cross_11.2.0-16cross1 libseccomp2_2.5.3-2 libselinux1_3.3-1+b1 libsemanage-common_3.3-1 libsemanage2_3.3-1+b1 libsepol2_3.3-1 libsigsegv2_2.14-1 libsmartcols1_2.37.3-1+b1 libssl1.1_1.1.1m-1 libstdc++-11-dev_11.2.0-16 libstdc++-11-dev-i386-cross_11.2.0-16cross1 libstdc++6_11.2.0-16 libstdc++6-i386-cross_11.2.0-16cross1 libsub-override-perl_0.09-2 libsystemd0_250.3-2 libtasn1-6_4.18.0-4 libtinfo6_6.3-2 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libtsan0_11.2.0-16 libubsan1_11.2.0-16 libubsan1-i386-cross_11.2.0-16cross1 libuchardet0_0.0.7-1 libudev1_250.3-2 libunistring2_1.0-1 libuuid1_2.37.3-1+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.12+dfsg-5+b1 libxxhash0_0.8.1-1 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.16.7-2 linux-libc-dev-i386-cross_5.15.5-1cross1 login_1:4.11.1+dfsg1-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.10.1-1 mawk_1.3.4.20200120-3 mount_2.37.3-1+b1 ncurses-base_6.3-2 ncurses-bin_6.3-2 passwd_1:4.11.1+dfsg1-1 patch_2.7.6-7 perl_5.34.0-3 perl-base_5.34.0-3 perl-modules-5.34_5.34.0-3 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.01-1 tar_1.34+dfsg-1 tzdata_2021e-1 ucf_3.0043 util-linux_2.37.3-1+b1 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: spaln Binary: spaln, spaln-data Architecture: any all Version: 2.4.7+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/ogotoh/spaln Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/spaln Vcs-Git: https://salsa.debian.org/med-team/spaln.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: spaln deb science optional arch=any spaln-data deb science optional arch=all Checksums-Sha1: bab54ee04e92765263e741fadc2937a5121bdf96 19675852 spaln_2.4.7+dfsg.orig.tar.xz 638c1aa81d35909272533b3c999f331a1c6447ff 5492 spaln_2.4.7+dfsg-1.debian.tar.xz Checksums-Sha256: 6bd7b64aa7838ff0e32a5d4b0bb204cfb2a594ad9bd151ca921f287e24bec4fe 19675852 spaln_2.4.7+dfsg.orig.tar.xz 34abcdf4dfceec4534b05e07e2507ffe3a223b07ada34d40046dcce0eed80b8e 5492 spaln_2.4.7+dfsg-1.debian.tar.xz Files: 1f09a42362af2be3d8ed5355f9113546 19675852 spaln_2.4.7+dfsg.orig.tar.xz 89a9e006a0a9b9dd319618ce42ef5e49 5492 spaln_2.4.7+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- 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13:25:24 2022 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify signature ./spaln_2.4.7+dfsg-1.dsc dpkg-source: info: extracting spaln in /<> dpkg-source: info: unpacking spaln_2.4.7+dfsg.orig.tar.xz dpkg-source: info: unpacking spaln_2.4.7+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying portability.patch dpkg-source: info: applying add_path_to_testscript.patch Check disk space ---------------- Sufficient free space for build +------------------------------------------------------------------------------+ | Starting Timed Build Commands | +------------------------------------------------------------------------------+ ulimit -c --------- 0 I: Finished running 'ulimit -c'. Finished processing commands. -------------------------------------------------------------------------------- User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmutg PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=crossqa-sid SCHROOT_CHROOT_NAME=crossqa-sid SCHROOT_COMMAND=env SCHROOT_GID=1002 SCHROOT_GROUP=helmutg SCHROOT_SESSION_ID=crossqa-sid-2502afce-d123-48bb-8062-b3783e517571 SCHROOT_UID=1002 SCHROOT_USER=helmutg SHELL=/bin/sh USER=helmutg dpkg-buildpackage ----------------- Command: dpkg-buildpackage -ai386 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package spaln dpkg-buildpackage: info: source version 2.4.7+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --sourcedirectory=src debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean || true install -d /<>/spaln-2.4.7\+dfsg/debian/.debhelper/generated/_source/home rm -f src/dbs.h src/iolib.h src/*.o src/*.a src/Makefile make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/spaln.substvars debian/spaln-data.substvars debian/files rm -fr -- debian/spaln/ debian/tmp/ debian/spaln-data/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --sourcedirectory=src dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' # the configure script is not originated from autoconf and needs to be manually called cd src && AR="i686-linux-gnu-ar rc" ./configure --exec_prefix=/usr/bin OK, CXX=i686-linux-gnu-g++ CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto binaries install to /usr/bin tables install to /usr/share/spaln/table alndbs install to /usr/share/spaln/seqdb wrote Makefile wrote files OK. try make and make install. good luck! make[1]: Leaving directory '/<>' debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- table_dir=/usr/share/spaln/table alndbs_dir=/usr/share/spaln/seqdb exec_prefix=/usr/bin install -d /<>/spaln-2.4.7\+dfsg/debian/.debhelper/generated/_source/home cd src && make -j1 table_dir=/usr/share/spaln/table alndbs_dir=/usr/share/spaln/seqdb exec_prefix=/usr/bin make[2]: Entering directory '/<>/src' i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c spaln.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c blksrc.cc blksrc.cc: In function ‘void idx2SeqLenStat(const char*, SeqLenStat&)’: blksrc.cc:1002:26: warning: comparison of integer expressions of different signedness: ‘INT’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare] 1002 | if (sls.maxv < widx->seqlen) sls.maxv = widx->seqlen; | ~~~~~~~~~^~~~~~~~~~~~~~ blksrc.cc: In member function ‘int SrchBlk::FindHsp(BPAIR*)’: blksrc.cc:2445:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘INT’ {aka ‘unsigned int’} [-Wsign-compare] 2445 | if (curgr - gener >= OutPrm.MaxOut - 1) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ blksrc.cc: In member function ‘int SrchBlk::TestOutput(int)’: blksrc.cc:2651:20: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 11 has type ‘int’ [-Wformat=] 2651 | printf(ofmt, query->sqname(), dir[d / 2], query->left, query->right, cid, p, q, | ^~~~ ...... 2654 | bh4->as[d][bh4->maxs[d]] - query->at(0), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | int blksrc.cc:2651:20: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 12 has type ‘int’ [-Wformat=] 2651 | printf(ofmt, query->sqname(), dir[d / 2], query->left, query->right, cid, p, q, | ^~~~ ...... 2655 | bh4->as[e][bh4->maxs[e]] - query->at(0), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | int i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c aln2.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c dbs.cc dbs.cc: In member function ‘Seq* Seq::getdbseq(DbsDt*, const char*, int, bool)’: dbs.cc:821:23: warning: comparison of integer expressions of different signedness: ‘INT’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare] 821 | if (n > record->seqlen) n = record->seqlen; | ~~^~~~~~~~~~~~~~~~ dbs.cc:826:23: warning: comparison of integer expressions of different signedness: ‘INT’ {aka ‘unsigned int’} and ‘long int’ [-Wsign-compare] 826 | if (n == record->seqlen) break; | ~~^~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c gaps.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c codepot.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c divseq.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c gsinfo.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2b1.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2d1.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2h1.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c fwd2s1.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c bitpat.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c seq.cc seq.cc: In member function ‘Seq* Seq::aliaseq(Seq*, const bool&)’: seq.cc:411:15: warning: ‘void* memcpy(void*, const void*, size_t)’ writing to an object of type ‘class Seq’ with no trivial copy-assignment; use copy-assignment or copy-initialization instead [-Wclass-memaccess] 411 | memcpy(dest, this, sizeof(Seq)); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from seq.cc:23: seq.h:256:7: note: ‘class Seq’ declared here 256 | class Seq { | ^~~ seq.cc: In function ‘void reportseq(Seq**, int)’: seq.cc:482:50: warning: format ‘%p’ expects argument of type ‘void*’, but argument 9 has type ‘int*’ [-Wformat=] 482 | printf("%d\t%d\t%d\t%d\t%d\t%d\t%p\t%p\n", i + 1, | ~^ | | | void* | %n 483 | sd->sid, sd->vrtl, sd->len, sd->area_, sd->did, sd->seq_, sd->lens); | ~~~~~~~~ | | | int* seq.cc: In member function ‘void Seq::seqalloc(const int&, const int&, const bool&)’: seq.cc:516:33: warning: catching polymorphic type ‘class std::bad_alloc’ by value [-Wcatch-value=] 516 | } catch (std::bad_alloc ba) { | ^~ seq.cc: In member function ‘CHAR* Seq::seq_realloc()’: seq.cc:538:33: warning: catching polymorphic type ‘class std::bad_alloc’ by value [-Wcatch-value=] 538 | } catch (std::bad_alloc ba) { | ^~ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c simmtx.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c sqpr.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c utilseq.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c vmf.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c wln.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c boyer_moore.cc i686-linux-gnu-ar rc sblib.a aln2.o dbs.o gaps.o codepot.o divseq.o gsinfo.o \ fwd2b1.o fwd2d1.o fwd2h1.o fwd2s1.o bitpat.o \ seq.o simmtx.o sqpr.o utilseq.o vmf.o wln.o boyer_moore.o i686-linux-gnu-ranlib sblib.a i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c clib.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c iolib.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c mfile.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c sets.cc i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -c supprime.cc i686-linux-gnu-ar rc clib.a clib.o iolib.o mfile.o sets.o supprime.o i686-linux-gnu-ranlib clib.a i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o spaln spaln.o blksrc.o sblib.a clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -flto i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o sortgrcd sortgrcd.cc sblib.a clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -flto sortgrcd.cc: In function ‘int count_record(const char*, const char*, size_t)’: sortgrcd.cc:995:25: warning: ISO C++ forbids variable length array ‘buf’ [-Wvla] 995 | char buf[rcdsize]; | ^~~ i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o makmdm makmdm.cc clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -flto makmdm.cc: In function ‘void exp_qdt(double (*)[20], double*, double, int)’: makmdm.cc:395:15: warning: unused variable ‘q’ [-Wunused-variable] 395 | static double q[2][20][20] = { | ^ makmdm.cc: At global scope: makmdm.cc:395:15: warning: ‘q’ defined but not used [-Wunused-variable] i686-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -flto -O3 -Wall -DM_THREAD=1 -DUSE_ZLIB=1 -o makdbs makdbs.cc sblib.a clib.a -lpthread -lm -lz -Wl,-z,relro -Wl,-z,now -flto make[2]: Leaving directory '/<>/src' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a -O--sourcedirectory=src" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src rm -f -- debian/spaln.substvars rm -fr -- debian/.debhelper/generated/spaln/ debian/spaln/ debian/tmp/ rm -f debian/spaln.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install -- table_dir=/<>/debian/spaln-data//usr/share/spaln/table alndbs_dir=/<>/debian/spaln-data//usr/share/spaln/seqdb exec_prefix=/<>/debian/spaln//usr/bin install -d /<>/spaln-2.4.7\+dfsg/debian/tmp cd src && make -j1 install DESTDIR=/<>/spaln-2.4.7\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no table_dir=/<>/spaln-2.4.7\+dfsg/debian/spaln-data//usr/share/spaln/table alndbs_dir=/<>/spaln-2.4.7\+dfsg/debian/spaln-data//usr/share/spaln/seqdb exec_prefix=/<>/spaln-2.4.7\+dfsg/debian/spaln//usr/bin make[2]: Entering directory '/<>/src' test -d /<>/debian/spaln//usr/bin || mkdir -p /<>/debian/spaln//usr/bin cp spaln sortgrcd makmdm makdbs /<>/debian/spaln//usr/bin test -d /<>/debian/spaln-data//usr/share/spaln/table || mkdir -p /<>/debian/spaln-data//usr/share/spaln/table ./makmdm /<>/debian/spaln-data//usr/share/spaln/table ./makmdm: 1: Syntax error: "(" unexpected make[2]: *** [Makefile:60: install] Error 2 make[2]: Leaving directory '/<>/src' dh_auto_install: error: cd src && make -j1 install DESTDIR=/<>/spaln-2.4.7\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no table_dir=/<>/spaln-2.4.7\+dfsg/debian/spaln-data//usr/share/spaln/table alndbs_dir=/<>/spaln-2.4.7\+dfsg/debian/spaln-data//usr/share/spaln/seqdb exec_prefix=/<>/spaln-2.4.7\+dfsg/debian/spaln//usr/bin returned exit code 2 make[1]: *** [debian/rules:30: override_dh_auto_install] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:20: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2022-02-17T20:32:00Z Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 112456 Build-Time: 193 Distribution: unstable Fail-Stage: build Foreign Architectures: i386 Host Architecture: i386 Install-Time: 34 Job: spaln_2.4.7+dfsg-1 Machine Architecture: arm64 Package: spaln Package-Time: 260 Source-Version: 2.4.7+dfsg-1 Space: 112456 Status: attempted Version: 2.4.7+dfsg-1 -------------------------------------------------------------------------------- Finished at 2022-02-17T20:32:00Z Build needed 00:04:20, 112456k disk space