sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | stacks 2.41+dfsg-1 (ppc64el) Fri, 28 Feb 2020 20:39:33 +0000 | +==============================================================================+ Package: stacks Version: 2.41+dfsg-1 Source Version: 2.41+dfsg-1 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-d03f8796-1625-43f9-b52e-9f5d6b73059d' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-fRZcM1/resolver-xG4TLb' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [142 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-02-28-0815.28.pdiff [5869 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-02-28-1417.46.pdiff [15.0 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-02-28-1417.46.pdiff [15.0 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-02-28-0815.28.pdiff [3773 B] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-02-28-1417.46.pdiff [12.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-02-28-1417.46.pdiff [12.9 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main ppc64el Packages [8061 kB] Fetched 8297 kB in 2s (4888 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'stacks' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/stacks.git Please use: git clone https://salsa.debian.org/med-team/stacks.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 393 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main stacks 2.41+dfsg-1 (dsc) [2034 B] Get:2 http://debian.oregonstate.edu/debian unstable/main stacks 2.41+dfsg-1 (tar) [384 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main stacks 2.41+dfsg-1 (diff) [7116 B] Fetched 393 kB in 0s (4634 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/stacks-fRZcM1/stacks-2.41+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-fRZcM1' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 12~), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper (>= 12~), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [431 B] Get:5 copy:/<>/apt_archive ./ Packages [524 B] Fetched 1912 B in 0s (99.5 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdmainutils build-essential cpp-9-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-10-base:ppc64el gcc-10-cross-base gcc-9-base:ppc64el gcc-9-cross-base gcc-9-powerpc64le-linux-gnu gcc-9-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:ppc64el libasan5-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbam-dev:ppc64el libbrotli1:ppc64el libbsd0 libbz2-1.0:ppc64el libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:ppc64el libelf1 libffi7:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:ppc64el libgcc-9-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgcrypt20:ppc64el libglib2.0-0 libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgpg-error0:ppc64el libgssapi-krb5-2:ppc64el libhogweed5:ppc64el libhts-dev:ppc64el libhts3:ppc64el libicu63 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.4-2:ppc64el libldap-common liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses6:ppc64el libnettle7:ppc64el libnghttp2-14:ppc64el libp11-kit0:ppc64el libpipeline1 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libsigsegv2 libsparsehash-dev libssh2-1:ppc64el libssl1.1:ppc64el libstdc++-9-dev libstdc++-9-dev:ppc64el libstdc++-9-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtasn1-6:ppc64el libtinfo6:ppc64el libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf samtools:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc wamerican | wordlist whois vacation gcc-9-locales cpp-doc dh-make binutils-multiarch g++-multilib g++-9-multilib gcc-9-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el glibc-doc manpages-dev:ppc64el rng-tools:ppc64el gnutls-bin:ppc64el krb5-doc:ppc64el krb5-user:ppc64el liblzma-doc:ppc64el libstdc++-9-doc libstdc++-9-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx ca-certificates:ppc64el libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:ppc64el krb5-locales:ppc64el libgpm2:ppc64el publicsuffix:ppc64el libsasl2-modules:ppc64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl python3:ppc64el cwltool:ppc64el The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdmainutils build-essential cpp-9-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++ g++-9 g++-9-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-10-base:ppc64el gcc-10-cross-base gcc-9-base:ppc64el gcc-9-cross-base gcc-9-powerpc64le-linux-gnu gcc-9-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:ppc64el libasan5-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbam-dev:ppc64el libbrotli1:ppc64el libbsd0 libbz2-1.0:ppc64el libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate0:ppc64el libelf1 libffi7:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:ppc64el libgcc-9-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgcrypt20:ppc64el libglib2.0-0 libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgpg-error0:ppc64el libgssapi-krb5-2:ppc64el libhogweed5:ppc64el libhts-dev:ppc64el libhts3:ppc64el libicu63 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.4-2:ppc64el libldap-common liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses6:ppc64el libnettle7:ppc64el libnghttp2-14:ppc64el libp11-kit0:ppc64el libpipeline1 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libsigsegv2 libsparsehash-dev libssh2-1:ppc64el libssl1.1:ppc64el libstdc++-9-dev libstdc++-9-dev:ppc64el libstdc++-9-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtasn1-6:ppc64el libtinfo6:ppc64el libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf samtools:ppc64el sbuild-build-depends-main-dummy:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 144 newly installed, 0 to remove and 0 not upgraded. Need to get 96.8 MB of archives. After this operation, 400 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [944 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.10.0-1 [107 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-4 [919 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.1-1 [1308 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main ppc64el gcc-10-base ppc64el 10-20200222-1 [195 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main ppc64el gcc-9-base ppc64el 9.2.1-30 [196 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-4 [262 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-4 [120 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-4 [67.9 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-powerpc64le-linux-gnu amd64 2.34-3 [2253 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.10-10 [104 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.29-10 [2638 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.2.1-30 [1697 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.2.1-30 [10.7 MB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-powerpc64le-linux-gnu-base amd64 9.2.1-28cross1 [196 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-powerpc64le-linux-gnu amd64 9.2.1-28cross1 [6744 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-powerpc64le-linux-gnu amd64 4:9.2.1-3.1 [16.7 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base all 9.2.1-28cross1 [191 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base all 10-20200211-1cross1 [191 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-ppc64el-cross all 2.29-9cross1 [1527 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-ppc64el-cross all 10-20200211-1cross1 [30.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-ppc64el-cross all 10-20200211-1cross1 [105 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-ppc64el-cross all 10-20200211-1cross1 [28.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-ppc64el-cross all 10-20200211-1cross1 [9608 B] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-ppc64el-cross all 9.2.1-28cross1 [401 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-ppc64el-cross all 10-20200211-1cross1 [155 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-ppc64el-cross all 10-20200211-1cross1 [318 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-ppc64el-cross all 10-20200211-1cross1 [505 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-ppc64el-cross all 10-20200211-1cross1 [147 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0-ppc64el-cross all 10-20200211-1cross1 [152 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-ppc64el-cross all 9.2.1-28cross1 [1261 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-powerpc64le-linux-gnu amd64 9.2.1-28cross1 [7120 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-powerpc64le-linux-gnu amd64 4:9.2.1-3.1 [1480 B] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-ppc64el-cross all 5.4.8-1cross1 [1139 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-ppc64el-cross all 2.29-9cross1 [2657 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-ppc64el-cross all 9.2.1-28cross1 [1727 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-powerpc64le-linux-gnu amd64 9.2.1-28cross1 [7329 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 g++-powerpc64le-linux-gnu amd64 4:9.2.1-3.1 [1188 B] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000002-1 [52.0 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.2-2 [8301 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-4 [709 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1+b1 [344 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-ppc64el all 12.8 [6652 B] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-13 [513 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 12.9 [183 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.67-2 [104 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [23.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.6.3-2 [14.7 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.62.5-1 [1320 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.9 [994 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-s1 ppc64el 10-20200222-1 [30.6 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt1 ppc64el 1:4.4.10-10 [96.9 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6 ppc64el 2.29-10 [2806 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main ppc64el libasan5 ppc64el 9.2.1-30 [408 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main ppc64el libatomic1 ppc64el 10-20200222-1 [9808 B] Get:91 http://debian.oregonstate.edu/debian unstable/main ppc64el libbam-dev ppc64el 0.1.19-4 [141 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main ppc64el libbrotli1 ppc64el 1.0.7-6 [278 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main ppc64el libbz2-1.0 ppc64el 1.0.8-2 [50.8 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main ppc64el linux-libc-dev ppc64el 5.4.19-1 [1069 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt-dev ppc64el 1:4.4.10-10 [121 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6-dev ppc64el 2.29-10 [2665 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main ppc64el libcom-err2 ppc64el 1.45.5-2 [72.0 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main ppc64el libgmp10 ppc64el 2:6.2.0+dfsg-4 [253 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main ppc64el libnettle7 ppc64el 3.5.1+really3.5.1-2 [246 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main ppc64el libhogweed5 ppc64el 3.5.1+really3.5.1-2 [141 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main ppc64el libunistring2 ppc64el 0.9.10-2 [381 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main ppc64el libidn2-0 ppc64el 2.2.0-2 [84.8 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main ppc64el libffi7 ppc64el 3.3-3 [23.7 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main ppc64el libp11-kit0 ppc64el 0.23.20-1 [325 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main ppc64el libtasn1-6 ppc64el 4.16.0-2 [59.5 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main ppc64el libgnutls30 ppc64el 3.6.12-2 [1197 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main ppc64el libkeyutils1 ppc64el 1.6.1-2 [16.7 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main ppc64el libkrb5support0 ppc64el 1.17-6 [68.2 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main ppc64el libk5crypto3 ppc64el 1.17-6 [127 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main ppc64el libssl1.1 ppc64el 1.1.1d-2 [1523 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main ppc64el libkrb5-3 ppc64el 1.17-6 [399 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main ppc64el libgssapi-krb5-2 ppc64el 1.17-6 [170 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg1-0.6 [718 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main ppc64el libsasl2-modules-db ppc64el 2.1.27+dfsg-2 [71.0 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main ppc64el libsasl2-2 ppc64el 2.1.27+dfsg-2 [115 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.49+dfsg-1 [91.9 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main ppc64el libldap-2.4-2 ppc64el 2.4.49+dfsg-1 [243 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main ppc64el libnghttp2-14 ppc64el 1.40.0-1 [90.6 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main ppc64el libpsl5 ppc64el 0.20.2-2 [55.6 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-2 [94.7 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2+b1 [65.9 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main ppc64el libgpg-error0 ppc64el 1.37-1 [78.1 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcrypt20 ppc64el 1.8.5-5 [530 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main ppc64el libssh2-1 ppc64el 1.8.0-2.1 [147 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main ppc64el libcurl3-gnutls ppc64el 7.68.0-1 [333 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main ppc64el libdeflate0 ppc64el 1.5-3 [64.8 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main ppc64el libgomp1 ppc64el 10-20200222-1 [107 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main ppc64el libitm1 ppc64el 10-20200222-1 [28.8 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main ppc64el liblsan0 ppc64el 10-20200222-1 [156 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main ppc64el libtsan0 ppc64el 10-20200222-1 [325 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++6 ppc64el 10-20200222-1 [546 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main ppc64el libubsan1 ppc64el 10-20200222-1 [148 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main ppc64el libquadmath0 ppc64el 10-20200222-1 [152 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-9-dev ppc64el 9.2.1-30 [1260 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main ppc64el liblzma5 ppc64el 5.2.4-1+b1 [162 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main ppc64el libhts3 ppc64el 1.10.2-3 [406 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main ppc64el liblzma-dev ppc64el 5.2.4-1+b1 [221 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2 [195 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main ppc64el libhts-dev ppc64el 1.10.2-3 [4851 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main ppc64el libtinfo6 ppc64el 6.1+20191019-1 [340 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main ppc64el libncurses6 ppc64el 6.1+20191019-1 [114 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main amd64 libsparsehash-dev all 2.0.3-1 [76.9 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++-9-dev ppc64el 9.2.1-30 [1747 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main ppc64el samtools ppc64el 1.10-3 [544 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 96.8 MB in 1s (77.6 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 12785 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-4_amd64.deb ... Unpacking groff-base (1.22.4-4) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.9.1-1_amd64.deb ... Unpacking man-db (2.9.1-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../006-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:ppc64el. Preparing to unpack .../007-gcc-10-base_10-20200222-1_ppc64el.deb ... Unpacking gcc-10-base:ppc64el (10-20200222-1) ... Selecting previously unselected package gcc-9-base:ppc64el. Preparing to unpack .../008-gcc-9-base_9.2.1-30_ppc64el.deb ... Unpacking gcc-9-base:ppc64el (9.2.1-30) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../009-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../010-libmagic-mgc_1%3a5.38-4_amd64.deb ... Unpacking libmagic-mgc (1:5.38-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../011-libmagic1_1%3a5.38-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-4) ... Selecting previously unselected package file. Preparing to unpack .../012-file_1%3a5.38-4_amd64.deb ... Unpacking file (1:5.38-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../013-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../015-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../016-m4_1.4.18-4_amd64.deb ... Unpacking m4 (1.4.18-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../017-autoconf_2.69-11.1_all.deb ... Unpacking autoconf (2.69-11.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../018-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../019-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../020-autopoint_0.19.8.1-10_all.deb ... Unpacking autopoint (0.19.8.1-10) ... Selecting previously unselected package binutils-powerpc64le-linux-gnu. Preparing to unpack .../021-binutils-powerpc64le-linux-gnu_2.34-3_amd64.deb ... Unpacking binutils-powerpc64le-linux-gnu (2.34-3) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../022-libcrypt-dev_1%3a4.4.10-10_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.10-10) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../023-libc6-dev_2.29-10_amd64.deb ... Unpacking libc6-dev:amd64 (2.29-10) ... Selecting previously unselected package libstdc++-9-dev:amd64. Preparing to unpack .../024-libstdc++-9-dev_9.2.1-30_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.2.1-30) ... Selecting previously unselected package g++-9. Preparing to unpack .../025-g++-9_9.2.1-30_amd64.deb ... Unpacking g++-9 (9.2.1-30) ... Selecting previously unselected package g++. Preparing to unpack .../026-g++_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++ (4:9.2.1-3.1) ... Selecting previously unselected package build-essential. Preparing to unpack .../027-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-9-powerpc64le-linux-gnu-base:amd64. Preparing to unpack .../028-gcc-9-powerpc64le-linux-gnu-base_9.2.1-28cross1_amd64.deb ... Unpacking gcc-9-powerpc64le-linux-gnu-base:amd64 (9.2.1-28cross1) ... Selecting previously unselected package cpp-9-powerpc64le-linux-gnu. Preparing to unpack .../029-cpp-9-powerpc64le-linux-gnu_9.2.1-28cross1_amd64.deb ... Unpacking cpp-9-powerpc64le-linux-gnu (9.2.1-28cross1) ... Selecting previously unselected package cpp-powerpc64le-linux-gnu. Preparing to unpack .../030-cpp-powerpc64le-linux-gnu_4%3a9.2.1-3.1_amd64.deb ... Unpacking cpp-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Selecting previously unselected package cross-config. Preparing to unpack .../031-cross-config_2.6.15-3_all.deb ... Unpacking cross-config (2.6.15-3) ... Selecting previously unselected package gcc-9-cross-base. Preparing to unpack .../032-gcc-9-cross-base_9.2.1-28cross1_all.deb ... Unpacking gcc-9-cross-base (9.2.1-28cross1) ... Selecting previously unselected package gcc-10-cross-base. Preparing to unpack .../033-gcc-10-cross-base_10-20200211-1cross1_all.deb ... Unpacking gcc-10-cross-base (10-20200211-1cross1) ... Selecting previously unselected package libc6-ppc64el-cross. Preparing to unpack .../034-libc6-ppc64el-cross_2.29-9cross1_all.deb ... Unpacking libc6-ppc64el-cross (2.29-9cross1) ... Selecting previously unselected package libgcc-s1-ppc64el-cross. Preparing to unpack .../035-libgcc-s1-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libgcc-s1-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libgomp1-ppc64el-cross. Preparing to unpack .../036-libgomp1-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libgomp1-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libitm1-ppc64el-cross. Preparing to unpack .../037-libitm1-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libitm1-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libatomic1-ppc64el-cross. Preparing to unpack .../038-libatomic1-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libatomic1-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libasan5-ppc64el-cross. Preparing to unpack .../039-libasan5-ppc64el-cross_9.2.1-28cross1_all.deb ... Unpacking libasan5-ppc64el-cross (9.2.1-28cross1) ... Selecting previously unselected package liblsan0-ppc64el-cross. Preparing to unpack .../040-liblsan0-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking liblsan0-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libtsan0-ppc64el-cross. Preparing to unpack .../041-libtsan0-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libtsan0-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libstdc++6-ppc64el-cross. Preparing to unpack .../042-libstdc++6-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libstdc++6-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libubsan1-ppc64el-cross. Preparing to unpack .../043-libubsan1-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libubsan1-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libquadmath0-ppc64el-cross. Preparing to unpack .../044-libquadmath0-ppc64el-cross_10-20200211-1cross1_all.deb ... Unpacking libquadmath0-ppc64el-cross (10-20200211-1cross1) ... Selecting previously unselected package libgcc-9-dev-ppc64el-cross. Preparing to unpack .../045-libgcc-9-dev-ppc64el-cross_9.2.1-28cross1_all.deb ... Unpacking libgcc-9-dev-ppc64el-cross (9.2.1-28cross1) ... Selecting previously unselected package gcc-9-powerpc64le-linux-gnu. Preparing to unpack .../046-gcc-9-powerpc64le-linux-gnu_9.2.1-28cross1_amd64.deb ... Unpacking gcc-9-powerpc64le-linux-gnu (9.2.1-28cross1) ... Selecting previously unselected package gcc-powerpc64le-linux-gnu. Preparing to unpack .../047-gcc-powerpc64le-linux-gnu_4%3a9.2.1-3.1_amd64.deb ... Unpacking gcc-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Selecting previously unselected package linux-libc-dev-ppc64el-cross. Preparing to unpack .../048-linux-libc-dev-ppc64el-cross_5.4.8-1cross1_all.deb ... Unpacking linux-libc-dev-ppc64el-cross (5.4.8-1cross1) ... Selecting previously unselected package libc6-dev-ppc64el-cross. Preparing to unpack .../049-libc6-dev-ppc64el-cross_2.29-9cross1_all.deb ... Unpacking libc6-dev-ppc64el-cross (2.29-9cross1) ... Selecting previously unselected package libstdc++-9-dev-ppc64el-cross. Preparing to unpack .../050-libstdc++-9-dev-ppc64el-cross_9.2.1-28cross1_all.deb ... Unpacking libstdc++-9-dev-ppc64el-cross (9.2.1-28cross1) ... Selecting previously unselected package g++-9-powerpc64le-linux-gnu. Preparing to unpack .../051-g++-9-powerpc64le-linux-gnu_9.2.1-28cross1_amd64.deb ... Unpacking g++-9-powerpc64le-linux-gnu (9.2.1-28cross1) ... Selecting previously unselected package g++-powerpc64le-linux-gnu. Preparing to unpack .../052-g++-powerpc64le-linux-gnu_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../053-libconfig-inifiles-perl_3.000002-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000002-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../054-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../055-libicu63_63.2-2_amd64.deb ... Unpacking libicu63:amd64 (63.2-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../056-libxml2_2.9.10+dfsg-4_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-4) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../057-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../058-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../059-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../060-libxml-libxml-perl_2.0134+dfsg-1+b1_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-1+b1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../061-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../062-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../063-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../064-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../065-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../066-libdebian-dpkgcross-perl_2.6.15-3_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../067-dpkg-cross_2.6.15-3_all.deb ... Unpacking dpkg-cross (2.6.15-3) ... Selecting previously unselected package crossbuild-essential-ppc64el. Preparing to unpack .../068-crossbuild-essential-ppc64el_12.8_all.deb ... Unpacking crossbuild-essential-ppc64el (12.8) ... Selecting previously unselected package libtool. Preparing to unpack .../069-libtool_2.4.6-13_all.deb ... Unpacking libtool (2.4.6-13) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../070-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../071-libdebhelper-perl_12.9_all.deb ... Unpacking libdebhelper-perl (12.9) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../072-libarchive-zip-perl_1.67-2_all.deb ... Unpacking libarchive-zip-perl (1.67-2) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../073-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../074-libfile-stripnondeterminism-perl_1.6.3-2_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.6.3-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../075-dh-strip-nondeterminism_1.6.3-2_all.deb ... Unpacking dh-strip-nondeterminism (1.6.3-2) ... Selecting previously unselected package libelf1:amd64. 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Setting up libpipeline1:amd64 (1.5.2-2) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.38-4) ... Setting up libarchive-zip-perl (1.67-2) ... Setting up libglib2.0-0:amd64 (2.62.5-1) ... No schema files found: doing nothing. Setting up libc6-ppc64el-cross (2.29-9cross1) ... Setting up libdebhelper-perl (12.9) ... Setting up libmagic1:amd64 (1:5.38-4) ... Setting up linux-libc-dev:ppc64el (5.4.19-1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up gettext-base (0.19.8.1-10) ... Setting up file (1:5.38-4) ... Setting up libldap-common (2.4.49+dfsg-1) ... Setting up gcc-9-powerpc64le-linux-gnu-base:amd64 (9.2.1-28cross1) ... Setting up libyaml-perl (1.30-1) ... Setting up libsparsehash-dev (2.0.3-1) ... Setting up libicu63:amd64 (63.2-2) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cpp-9-powerpc64le-linux-gnu (9.2.1-28cross1) ... Setting up gcc-10-base:ppc64el (10-20200222-1) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up libbam-dev:ppc64el (0.1.19-4) ... Setting up gcc-9-cross-base (9.2.1-28cross1) ... Setting up gcc-10-cross-base (10-20200211-1cross1) ... Setting up libitm1-ppc64el-cross (10-20200211-1cross1) ... Setting up libatomic1-ppc64el-cross (10-20200211-1cross1) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.10-10) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up linux-libc-dev-ppc64el-cross (5.4.8-1cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libc6-dev:amd64 (2.29-10) ... Setting up libgcc-s1-ppc64el-cross (10-20200211-1cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.34-3) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-4) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up cpp-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Setting up gcc-9-base:ppc64el (9.2.1-30) ... Setting up libfile-stripnondeterminism-perl (1.6.3-2) ... Setting up libstdc++-9-dev:amd64 (9.2.1-30) ... Setting up libc6-dev-ppc64el-cross (2.29-9cross1) ... Setting up libtool (2.4.6-13) ... Setting up libquadmath0-ppc64el-cross (10-20200211-1cross1) ... Setting up libasan5-ppc64el-cross (9.2.1-28cross1) ... Setting up m4 (1.4.18-4) ... Setting up libgomp1-ppc64el-cross (10-20200211-1cross1) ... Setting up liblsan0-ppc64el-cross (10-20200211-1cross1) ... Setting up libtsan0-ppc64el-cross (10-20200211-1cross1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0038+nmu1) ... Setting up g++-9 (9.2.1-30) ... Setting up libstdc++6-ppc64el-cross (10-20200211-1cross1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4) ... Setting up build-essential (12.8) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10) ... Setting up libubsan1-ppc64el-cross (10-20200211-1cross1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-libxml-perl (2.0134+dfsg-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-9-dev-ppc64el-cross (9.2.1-28cross1) ... Setting up gcc-9-powerpc64le-linux-gnu (9.2.1-28cross1) ... Setting up po-debconf (1.0.21) ... Setting up libstdc++-9-dev-ppc64el-cross (9.2.1-28cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-9-powerpc64le-linux-gnu (9.2.1-28cross1) ... Setting up g++-powerpc64le-linux-gnu (4:9.2.1-3.1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-ppc64el (12.8) ... Setting up libcrypt1:ppc64el (1:4.4.10-10) ... Setting up libgcc-s1:ppc64el (10-20200222-1) ... Setting up dh-autoreconf (19) ... Setting up libc6:ppc64el (2.29-10) ... Setting up libnettle7:ppc64el (3.5.1+really3.5.1-2) ... Setting up libcrypt-dev:ppc64el (1:4.4.10-10) ... Setting up libtasn1-6:ppc64el (4.16.0-2) ... Setting up libc6-dev:ppc64el (2.29-10) ... Setting up libbz2-1.0:ppc64el (1.0.8-2) ... Setting up libdb5.3:ppc64el (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:ppc64el (10-20200222-1) ... Setting up liblsan0:ppc64el (10-20200222-1) ... Setting up libitm1:ppc64el (10-20200222-1) ... Setting up libtinfo6:ppc64el (6.1+20191019-1) ... Setting up libtsan0:ppc64el (10-20200222-1) ... Setting up libkeyutils1:ppc64el (1.6.1-2) ... Setting up liblzma5:ppc64el (5.2.4-1+b1) ... Setting up libgpg-error0:ppc64el (1.37-1) ... Setting up libssl1.1:ppc64el (1.1.1d-2) ... Setting up libbrotli1:ppc64el (1.0.7-6) ... Setting up libffi7:ppc64el (3.3-3) ... Setting up libnghttp2-14:ppc64el (1.40.0-1) ... Setting up libunistring2:ppc64el (0.9.10-2) ... Setting up libdeflate0:ppc64el (1.5-3) ... Setting up libgcrypt20:ppc64el (1.8.5-5) ... Setting up debhelper (12.9) ... Setting up zlib1g:ppc64el (1:1.2.11.dfsg-2) ... Setting up libidn2-0:ppc64el (2.2.0-2) ... Setting up libcom-err2:ppc64el (1.45.5-2) ... Setting up libgomp1:ppc64el (10-20200222-1) ... Setting up libkrb5support0:ppc64el (1.17-6) ... Setting up libsasl2-modules-db:ppc64el (2.1.27+dfsg-2) ... Setting up libasan5:ppc64el (9.2.1-30) ... Setting up libgmp10:ppc64el (2:6.2.0+dfsg-4) ... Setting up libncurses6:ppc64el (6.1+20191019-1) ... Setting up libquadmath0:ppc64el (10-20200222-1) ... Setting up libp11-kit0:ppc64el (0.23.20-1) ... Setting up libatomic1:ppc64el (10-20200222-1) ... Setting up libk5crypto3:ppc64el (1.17-6) ... Setting up libsasl2-2:ppc64el (2.1.27+dfsg-2) ... Setting up liblzma-dev:ppc64el (5.2.4-1+b1) ... Setting up libubsan1:ppc64el (10-20200222-1) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2) ... Setting up libssh2-1:ppc64el (1.8.0-2.1) ... Setting up libkrb5-3:ppc64el (1.17-6) ... Setting up libpsl5:ppc64el (0.20.2-2) ... Setting up libhogweed5:ppc64el (3.5.1+really3.5.1-2) ... Setting up libgcc-9-dev:ppc64el (9.2.1-30) ... Setting up libgnutls30:ppc64el (3.6.12-2) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libgssapi-krb5-2:ppc64el (1.17-6) ... Setting up libstdc++-9-dev:ppc64el (9.2.1-30) ... Setting up libldap-2.4-2:ppc64el (2.4.49+dfsg-1) ... Setting up libcurl3-gnutls:ppc64el (7.68.0-1) ... Setting up libhts3:ppc64el (1.10.2-3) ... Setting up libhts-dev:ppc64el (1.10.2-3) ... Setting up samtools:ppc64el (1.10-3) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.29-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-6-amd64 #1 SMP Debian 4.19.67-2+deb10u2 (2019-11-11) amd64 (x86_64) Toolchain package versions: binutils_2.34-3 dpkg-dev_1.19.7 g++-9_9.2.1-30 gcc-8_8.3.0-29 gcc-9_9.2.1-30 libc6-dev_2.29-10 libstdc++-9-dev_9.2.1-30 libstdc++-9-dev-ppc64el-cross_9.2.1-28cross1 libstdc++6_10-20200222-1 libstdc++6-ppc64el-cross_10-20200211-1cross1 linux-libc-dev_5.4.19-1 Package versions: adduser_3.118 apt_1.8.4 autoconf_2.69-11.1 automake_1:1.16.1-4 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-3 binutils-common_2.34-3 binutils-powerpc64le-linux-gnu_2.34-3 binutils-x86-64-linux-gnu_2.34-3 bsdmainutils_11.1.2+b1 bsdutils_1:2.34-0.1 build-essential_12.8 bzip2_1.0.8-2 coreutils_8.30-3+b1 cpp_4:9.2.1-3.1 cpp-8_8.3.0-29 cpp-9_9.2.1-30 cpp-9-powerpc64le-linux-gnu_9.2.1-28cross1 cpp-powerpc64le-linux-gnu_4:9.2.1-3.1 cross-config_2.6.15-3 crossbuild-essential-ppc64el_12.8 dash_0.5.10.2-6 debconf_1.5.73 debhelper_12.9 debian-archive-keyring_2019.1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7 dpkg-cross_2.6.15-3 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.5-2 fakeroot_1.24-1 fdisk_2.34-0.1 file_1:5.38-4 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.2.1-30 g++-9-powerpc64le-linux-gnu_9.2.1-28cross1 g++-powerpc64le-linux-gnu_4:9.2.1-3.1 gcc_4:9.2.1-3.1 gcc-10-base_10-20200222-1 gcc-10-cross-base_10-20200211-1cross1 gcc-8_8.3.0-29 gcc-8-base_8.3.0-29 gcc-9_9.2.1-30 gcc-9-base_9.2.1-30 gcc-9-cross-base_9.2.1-28cross1 gcc-9-powerpc64le-linux-gnu_9.2.1-28cross1 gcc-9-powerpc64le-linux-gnu-base_9.2.1-28cross1 gcc-powerpc64le-linux-gnu_4:9.2.1-3.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.19-2 grep_3.4-1 groff-base_1.22.4-4 gzip_1.10-1 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-5 libapt-pkg5.0_1.8.4 libarchive-zip-perl_1.67-2 libasan5_9.2.1-30 libasan5-ppc64el-cross_9.2.1-28cross1 libatomic1_10-20200222-1 libatomic1-ppc64el-cross_10-20200211-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2 libaudit1_1:2.8.5-2+b1 libbam-dev_0.1.19-4 libbinutils_2.34-3 libblkid1_2.34-0.1 libbrotli1_1.0.7-6 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.29-10 libc-dev-bin_2.29-10 libc6_2.29-10 libc6-dev_2.29-10 libc6-dev-ppc64el-cross_2.29-9cross1 libc6-ppc64el-cross_2.29-9cross1 libcap-ng0_0.7.9-2.1+b1 libcc1-0_10-20200222-1 libcom-err2_1.45.5-2 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000002-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10 libcrypt1_1:4.4.10-10 libctf-nobfd0_2.34-3 libctf0_2.34-3 libcurl3-gnutls_7.68.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.251 libdebhelper-perl_12.9 libdebian-dpkgcross-perl_2.6.15-3 libdeflate0_1.5-3 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libext2fs2_1.45.5-2 libfakeroot_1.24-1 libfdisk1_2.34-0.1 libffi6_3.2.1-9 libffi7_3.3-3 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.6.3-2 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-29 libgcc-9-dev_9.2.1-30 libgcc-9-dev-ppc64el-cross_9.2.1-28cross1 libgcc-s1_10-20200222-1 libgcc-s1-ppc64el-cross_10-20200211-1cross1 libgcc1_1:10-20200222-1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.62.5-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.12-2 libgomp1_10-20200222-1 libgomp1-ppc64el-cross_10-20200211-1cross1 libgpg-error0_1.37-1 libgssapi-krb5-2_1.17-6 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhts-dev_1.10.2-3 libhts3_1.10.2-3 libicu63_63.2-2 libidn2-0_2.2.0-2 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10-20200222-1 libitm1-ppc64el-cross_10-20200211-1cross1 libk5crypto3_1.17-6 libkeyutils1_1.6.1-2 libkrb5-3_1.17-6 libkrb5support0_1.17-6 libldap-2.4-2_2.4.49+dfsg-1 libldap-common_2.4.49+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_10-20200222-1 liblsan0-ppc64el-cross_10-20200211-1cross1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1+b1 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-29 libncurses6_6.1+20191019-1 libncursesw6_6.1+20191019-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12+b1 libperl5.28_5.28.1-6 libperl5.30_5.30.0-9 libpipeline1_1.5.2-2 libpsl5_0.20.2-2 libquadmath0_10-20200222-1 libquadmath0-ppc64el-cross_10-20200211-1cross1 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.2-2 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.34-0.1 libsparsehash-dev_2.0.3-1 libss2_1.45.5-2 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1d-2 libstdc++-9-dev_9.2.1-30 libstdc++-9-dev-ppc64el-cross_9.2.1-28cross1 libstdc++6_10-20200222-1 libstdc++6-ppc64el-cross_10-20200211-1cross1 libsub-override-perl_0.09-2 libsystemd0_244.3-1 libtasn1-6_4.16.0-2 libtinfo6_6.1+20191019-1 libtool_2.4.6-13 libtsan0_10-20200222-1 libtsan0-ppc64el-cross_10-20200211-1cross1 libubsan1_10-20200222-1 libubsan1-ppc64el-cross_10-20200211-1cross1 libuchardet0_0.0.6-3 libudev1_244.3-1 libunistring2_0.9.10-2 libuuid1_2.34-0.1 libxml-libxml-perl_2.0134+dfsg-1+b1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-4 libyaml-perl_1.30-1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.4.19-1 linux-libc-dev-ppc64el-cross_5.4.8-1cross1 login_1:4.8.1-1 logsave_1.45.5-2 lsb-base_11.1.0 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1 ncurses-base_6.1+20191019-1 ncurses-bin_6.1+20191019-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-9 perl-base_5.30.0-9 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.0-9 po-debconf_1.0.21 samtools_1.10-3 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-2.1 tar_1.30+dfsg-6+b1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: stacks Binary: stacks Architecture: any Version: 2.41+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Tim Booth , Andreas Tille Homepage: http://creskolab.uoregon.edu/stacks/ Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/med-team/stacks Vcs-Git: https://salsa.debian.org/med-team/stacks.git Build-Depends: debhelper (>= 12~), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev Package-List: stacks deb science optional arch=any Checksums-Sha1: 07442661b512afcf39c0cbe393a6985e2915b33f 383748 stacks_2.41+dfsg.orig.tar.xz 00c9262209979874aad1f6c8a129c73e0b9b1945 7116 stacks_2.41+dfsg-1.debian.tar.xz Checksums-Sha256: 9086750a80a391e2c453b4f87a0815dc904b6748b9b40561efee002f84a9bcf7 383748 stacks_2.41+dfsg.orig.tar.xz c972fb69aeb3721191bf556898a39cf5d0fcd47c1a231cebcf73026ecbb4241c 7116 stacks_2.41+dfsg-1.debian.tar.xz Files: 3d9872dc53baeaf672e2002e646b021b 383748 stacks_2.41+dfsg.orig.tar.xz 706aea8fb48c25fb282e1c12b6bfbf42 7116 stacks_2.41+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl0o1fgRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtErXg/+NMD7ZZIZUUfHTWJSGtmYjZsge2zN2Wiz p/KtLT5fZWElBjCcTAjrKYyXiOWc8YF9+b4bsGait/QPfK2KD02sHwhXgk6nf1o0 7ZT260tdWfgB83nkrPXuBDdZwOb0y/k9lpq5YGTGvntMBgDWCZDtxJjaKftUKbhj K80pytnqjjmjl1XRRu+CPfrty7QO63TJjj7iGoFw4aA1Vbokc6SHbecKX0KGHlyl 0qzS1TIdDW4kdZlu3xVqzpZeTxf6vPOY1pf4u0V9GhfF6lRyE+WAjBaw1uq7n3gr cmjSOiBwYjx5+SXq25mBsy6oXb3s/JX1Tm5ImS2gJl2jVPqQpWNyVQ8BQ0gDWHqA uEDeFnS7HnMWueUEjMMNbZQDge5rPz44AuauWiybTIUkiZxM3m7MIy0Lc2oBN+SK vtR0VOPurmR1fno55t5yCVc14QgiphBE6c+MuF6pwz8sPGEfIr8H7QHA7ap+J3vA i/hYEqbh6ixhBNn44MJIcPScya+scMgRJfmmWRUY9fRi3r4iX1tE8kk3pVl4rsKg 0ntMZlsuWgG+JOhTBY5QkMQjvfsx7MT7S0PoXHYqS4X00dPN7W5jfWdmOHUt1lx1 0u5kfOW19/6CSoA9jCDzkSDa/Zl3HD+ZozPc0ZHESDd+YV+q3r286VfRrSAftPOd Vct3C87YemE= =o9f6 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Jul 12 18:48:24 2019 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./stacks_2.41+dfsg-1.dsc dpkg-source: info: extracting stacks in /<> dpkg-source: info: unpacking stacks_2.41+dfsg.orig.tar.xz dpkg-source: info: unpacking stacks_2.41+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying script-exe-paths dpkg-source: info: applying use_debian_packaged_htslib.patch dpkg-source: info: applying 2to3.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-d03f8796-1625-43f9-b52e-9f5d6b73059d SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package stacks dpkg-buildpackage: info: source version 2.41+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el fakeroot debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f ./constants.php make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-sparsehash --enable-bam \ --with-bam-include-path=/usr/include/samtools \ --with-bam-lib-path=/usr/lib ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=powerpc64le-linux-gnu --enable-sparsehash --enable-bam --with-bam-include-path=/usr/include/samtools --with-bam-lib-path=/usr/lib configure: WARNING: unrecognized options: --disable-maintainer-mode, --enable-sparsehash, --enable-bam, --with-bam-include-path, --with-bam-lib-path configure: loading site script /etc/dpkg-cross/cross-config.ppc64el checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for powerpc64le-linux-gnu-strip... powerpc64le-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for powerpc64le-linux-gnu-g++... powerpc64le-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether powerpc64le-linux-gnu-g++ accepts -g... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of powerpc64le-linux-gnu-g++... none checking for powerpc64le-linux-gnu-gcc... powerpc64le-linux-gnu-gcc checking whether we are using the GNU C compiler... yes checking whether powerpc64le-linux-gnu-gcc accepts -g... yes checking for powerpc64le-linux-gnu-gcc option to accept ISO C89... none needed checking whether powerpc64le-linux-gnu-gcc understands -c and -o together... yes checking dependency style of powerpc64le-linux-gnu-gcc... none checking whether powerpc64le-linux-gnu-g++ supports C++11 features by default... yes checking for powerpc64le-linux-gnu-ranlib... powerpc64le-linux-gnu-ranlib checking for powerpc64le-linux-gnu-ar... powerpc64le-linux-gnu-ar checking the archiver (powerpc64le-linux-gnu-ar) interface... ar checking for omp_set_num_threads in -lgomp... yes checking for gzread in -lz... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking how to run the C preprocessor... powerpc64le-linux-gnu-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for powerpc64le-linux-gnu-gcc option to support OpenMP... -fopenmp checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether closedir returns void... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... (cached) yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... (cached) yes checking for floor... no checking for memset... yes checking for pow... no checking for sqrt... no checking for clock_gettime... yes checking for functional regular expressions... configure: WARNING: Requires g++ 4.9.0 or greater. no checking for gawk... (cached) mawk checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode, --enable-sparsehash, --enable-bam, --with-bam-include-path, --with-bam-lib-path make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ustacks.o src/ustacks.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/aln_utils.o src/aln_utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/BamI.o src/BamI.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/catalog_utils.o src/catalog_utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/cmb.o src/cmb.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/constants.o src/constants.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/DNANSeq.o src/DNANSeq.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/DNASeq4.o src/DNASeq4.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/DNASeq.o src/DNASeq.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gzFasta.o src/gzFasta.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/input.o src/input.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/kmers.o src/kmers.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/locus.o src/locus.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/log_utils.o src/log_utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/MetaPopInfo.o src/MetaPopInfo.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/models.o src/models.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mstack.o src/mstack.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mst.o src/mst.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/nucleotides.o src/nucleotides.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/renz.o src/renz.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Seq.o src/Seq.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/sql_utilities.o src/sql_utilities.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/stacks.o src/stacks.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/utils.o src/utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Vcf.o src/Vcf.cc rm -f libcore.a powerpc64le-linux-gnu-ar cru libcore.a src/aln_utils.o src/BamI.o src/catalog_utils.o src/cmb.o src/constants.o src/DNANSeq.o src/DNASeq4.o src/DNASeq.o src/gzFasta.o src/input.o src/kmers.o src/locus.o src/log_utils.o src/MetaPopInfo.o src/models.o src/mstack.o src/mst.o src/nucleotides.o src/renz.o src/Seq.o src/sql_utilities.o src/stacks.o src/utils.o src/Vcf.o powerpc64le-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-ranlib libcore.a powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o ustacks src/ustacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/cstacks.o src/cstacks.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o cstacks src/cstacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/sstacks.o src/sstacks.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o sstacks src/sstacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/process_radtags.o src/process_radtags.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/clean.o src/clean.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/file_io.o src/file_io.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/write.o src/write.cc rm -f libclean.a powerpc64le-linux-gnu-ar cru libclean.a src/clean.o src/file_io.o src/write.o powerpc64le-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-ranlib libclean.a powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o process_radtags src/process_radtags.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/process_shortreads.o src/process_shortreads.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o process_shortreads src/process_shortreads.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/kmer_filter.o src/kmer_filter.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o kmer_filter src/kmer_filter.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/clone_filter.o src/clone_filter.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o clone_filter src/clone_filter.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/populations.o src/populations.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/export_formats.o src/export_formats.cc src/export_formats.cc: In member function ‘virtual int PhylipVarAllExport::post_processing()’: src/export_formats.cc:2360:22: warning: ' ' flag used with ‘%u’ gnu_printf format [-Wformat=] 2360 | sprintf(s, "% 11lu", this->_seq_len); | ^ powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/genotype_dictionaries.o src/genotype_dictionaries.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/PopSum.o src/PopSum.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Hwp.o src/Hwp.cc rm -f libpop.a powerpc64le-linux-gnu-ar cru libpop.a src/export_formats.o src/genotype_dictionaries.o src/PopSum.o src/Hwp.o powerpc64le-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-ranlib libpop.a powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o populations src/populations.o -lhts libcore.a libpop.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/phasedstacks.o src/phasedstacks.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o phasedstacks src/phasedstacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/tsv2bam.o src/tsv2bam.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o tsv2bam src/tsv2bam.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gstacks.o src/gstacks.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/debruijn.o src/debruijn.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/SuffixTree.o src/SuffixTree.cc powerpc64le-linux-gnu-g++ -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o gstacks src/gstacks.o src/debruijn.o src/SuffixTree.o -lhts libcore.a -lz -lgomp make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install --no-parallel make -j1 install DESTDIR=/<>/stacks-2.41\+dfsg/debian/stacks AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' /bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c ustacks cstacks sstacks process_radtags process_shortreads kmer_filter clone_filter populations phasedstacks tsv2bam gstacks '/<>/debian/stacks/usr/bin' /bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c scripts/denovo_map.pl scripts/ref_map.pl scripts/integrate_alignments.py scripts/count_fixed_catalog_snps.py scripts/stacks-integrate-alignments scripts/stacks-dist-extract scripts/stacks-gdb '/<>/debian/stacks/usr/bin' make install-data-hook make[5]: Entering directory '/<>' sed -e 's,_VERSION_,2.41,' -e 's,_BINDIR_,/usr/lib/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/denovo_map.pl > /<>/debian/stacks/usr/bin/denovo_map.pl.subst mv /<>/debian/stacks/usr/bin/denovo_map.pl.subst /<>/debian/stacks/usr/bin/denovo_map.pl chmod +x /<>/debian/stacks/usr/bin/denovo_map.pl sed -e 's,_VERSION_,2.41,' -e 's,_BINDIR_,/usr/lib/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/ref_map.pl > /<>/debian/stacks/usr/bin/ref_map.pl.subst mv /<>/debian/stacks/usr/bin/ref_map.pl.subst /<>/debian/stacks/usr/bin/ref_map.pl chmod +x /<>/debian/stacks/usr/bin/ref_map.pl sed -i.bkp -e 's,_VERSION_,2.41,' /<>/debian/stacks/usr/bin/stacks-integrate-alignments rm -f /<>/debian/stacks/usr/bin/stacks-integrate-alignments.bkp chmod +x /<>/debian/stacks/usr/bin/stacks-integrate-alignments chmod +x /<>/debian/stacks/usr/bin/stacks-dist-extract chmod +x /<>/debian/stacks/usr/bin/stacks-gdb make[5]: Leaving directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' mkdir -p debian/stacks/usr/lib/stacks mv debian/stacks/usr/bin debian/stacks/usr/lib/stacks cd debian/stacks/usr/lib/stacks/bin && \ for f in *.pl ; do \ ln -s "$f" "`basename $f .pl`" ; \ sed -i '1s?^#!/usr/bin/env.*perl?#!/usr/bin/perl?' $f ; \ done dh_install make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a debian/rules override_dh_link make[1]: Entering directory '/<>' dh_link mkdir -p debian/stacks/usr/lib/debian-med/bin cd debian/stacks/usr/lib/debian-med/bin && \ for f in `ls /<>/debian/stacks/usr/lib/stacks/bin` ; do \ ln -s ../../stacks/bin/$f ; \ done make[1]: Leaving directory '/<>' dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'stacks' in '../stacks_2.41+dfsg-1_ppc64el.deb'. dpkg-deb: building package 'stacks-dbgsym' in '../stacks-dbgsym_2.41+dfsg-1_ppc64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../stacks_2.41+dfsg-1_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-02-28T20:45:31Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ stacks_2.41+dfsg-1_ppc64el.changes: ----------------------------------- Format: 1.8 Date: Fri, 12 Jul 2019 20:40:33 +0200 Source: stacks Binary: stacks stacks-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 2.41+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: stacks - pipeline for building loci from short-read DNA sequences Changes: stacks (2.41+dfsg-1) unstable; urgency=medium . * New upstream version * debhelper 12 * Standards-Version: 4.4.0 * Secure URI in copyright format * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target * dh_auto_install --no-parallel * Removed stacks-web package since the code for the web service was removed from upstream source and the package has no active users according to popcon anyway * Python3 port of two simple scripts using 2to3 Checksums-Sha1: c5921c123e073dfe8a05ac384c0a36744b5ab4f8 27682928 stacks-dbgsym_2.41+dfsg-1_ppc64el.deb 1e70bc0b5a062b89d535795bc24ea7fcab9e5b75 5806 stacks_2.41+dfsg-1_ppc64el.buildinfo 6ddbd2429a34740024c4aeb99d4ce6f76558e6ec 1010200 stacks_2.41+dfsg-1_ppc64el.deb Checksums-Sha256: a29bf2c4395d1055d8e3297d01b4eeebc7a7591cb2fe268b5da114c4c8e5282e 27682928 stacks-dbgsym_2.41+dfsg-1_ppc64el.deb 96d860bf1a7b9c05a16b1912efb4ea26ffd324bcc57c8cd491931357fb5c6219 5806 stacks_2.41+dfsg-1_ppc64el.buildinfo 778897770fb53d13035bcd140139b91acbcdac69b6069c0f967cb67ffd0dbffc 1010200 stacks_2.41+dfsg-1_ppc64el.deb Files: 61073305c96f57ed3540a578633533b3 27682928 debug optional stacks-dbgsym_2.41+dfsg-1_ppc64el.deb 80c681dea9e277b9471bada2dc5813cf 5806 science optional stacks_2.41+dfsg-1_ppc64el.buildinfo 081235c0e28615b8029c392374b4b9a6 1010200 science optional stacks_2.41+dfsg-1_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: stacks Binary: stacks Architecture: ppc64el Version: 2.41+dfsg-1 Checksums-Md5: 61073305c96f57ed3540a578633533b3 27682928 stacks-dbgsym_2.41+dfsg-1_ppc64el.deb 081235c0e28615b8029c392374b4b9a6 1010200 stacks_2.41+dfsg-1_ppc64el.deb Checksums-Sha1: c5921c123e073dfe8a05ac384c0a36744b5ab4f8 27682928 stacks-dbgsym_2.41+dfsg-1_ppc64el.deb 6ddbd2429a34740024c4aeb99d4ce6f76558e6ec 1010200 stacks_2.41+dfsg-1_ppc64el.deb Checksums-Sha256: a29bf2c4395d1055d8e3297d01b4eeebc7a7591cb2fe268b5da114c4c8e5282e 27682928 stacks-dbgsym_2.41+dfsg-1_ppc64el.deb 778897770fb53d13035bcd140139b91acbcdac69b6069c0f967cb67ffd0dbffc 1010200 stacks_2.41+dfsg-1_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 28 Feb 2020 20:45:30 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-3), binutils-common (= 2.34-3), binutils-x86-64-linux-gnu (= 2.34-3), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.34-0.1), build-essential (= 12.8), bzip2 (= 1.0.8-2), coreutils (= 8.30-3+b1), cpp (= 4:9.2.1-3.1), cpp-8 (= 8.3.0-29), cpp-9 (= 9.2.1-30), dash (= 0.5.10.2-6), debconf (= 1.5.73), debhelper (= 12.9), debianutils (= 4.9.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.6.3-2), diffutils (= 1:3.7-3), dpkg (= 1.19.7), dpkg-dev (= 1.19.7), dwz (= 0.13-5), fdisk (= 2.34-0.1), file (= 1:5.38-4), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.2.1-30), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10-20200222-1), gcc-8 (= 8.3.0-29), gcc-8-base (= 8.3.0-29), gcc-9 (= 9.2.1-30), gcc-9-base (= 9.2.1-30), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), grep (= 3.4-1), groff-base (= 1.22.4-4), gzip (= 1.10-1), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-5), libarchive-zip-perl (= 1.67-2), libasan5 (= 9.2.1-30), libatomic1 (= 10-20200222-1), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-2), libaudit1 (= 1:2.8.5-2+b1), libbam-dev (= 0.1.19-4), libbinutils (= 2.34-3), libblkid1 (= 2.34-0.1), libbrotli1 (= 1.0.7-6), libbsd0 (= 0.10.0-1), libbz2-1.0 (= 1.0.8-2), libc-bin (= 2.29-10), libc-dev-bin (= 2.29-10), libc6 (= 2.29-10), libc6-dev (= 2.29-10), libcap-ng0 (= 0.7.9-2.1+b1), libcc1-0 (= 10-20200222-1), libcom-err2 (= 1.45.5-2), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.10-10), libcrypt1 (= 1:4.4.10-10), libctf-nobfd0 (= 2.34-3), libctf0 (= 2.34-3), libcurl3-gnutls (= 7.68.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.251), libdebhelper-perl (= 12.9), libdeflate0 (= 1.5-3), libdpkg-perl (= 1.19.7), libelf1 (= 0.176-1.1), libfdisk1 (= 2.34-0.1), libffi7 (= 3.3-3), libfile-stripnondeterminism-perl (= 1.6.3-2), libgcc-8-dev (= 8.3.0-29), libgcc-9-dev (= 9.2.1-30), libgcc-s1 (= 10-20200222-1), libgcc1 (= 1:10-20200222-1), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.62.5-1), libgmp10 (= 2:6.2.0+dfsg-4), libgnutls30 (= 3.6.12-2), libgomp1 (= 10-20200222-1), libgpg-error0 (= 1.37-1), libgssapi-krb5-2 (= 1.17-6), libhogweed5 (= 3.5.1+really3.5.1-2), libhts-dev (= 1.10.2-3), libhts3 (= 1.10.2-3), libicu63 (= 63.2-2), libidn2-0 (= 2.2.0-2), libisl22 (= 0.22.1-1), libitm1 (= 10-20200222-1), libk5crypto3 (= 1.17-6), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-6), libkrb5support0 (= 1.17-6), libldap-2.4-2 (= 2.4.49+dfsg-1), libldap-common (= 2.4.49+dfsg-1), liblsan0 (= 10-20200222-1), liblz4-1 (= 1.9.2-2), liblzma-dev (= 5.2.4-1+b1), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-4), libmagic1 (= 1:5.38-4), libmount1 (= 2.34-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-29), libncurses6 (= 6.1+20191019-1), libncursesw6 (= 6.1+20191019-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.40.0-1), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-12+b1), libperl5.30 (= 5.30.0-9), libpipeline1 (= 1.5.2-2), libpsl5 (= 0.20.2-2), libquadmath0 (= 10-20200222-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.2-2), libselinux1 (= 3.0-1+b1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.34-0.1), libsparsehash-dev (= 2.0.3-1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1d-2), libstdc++-9-dev (= 9.2.1-30), libstdc++6 (= 10-20200222-1), libsub-override-perl (= 0.09-2), libsystemd0 (= 244.3-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.1+20191019-1), libtool (= 2.4.6-13), libtsan0 (= 10-20200222-1), libubsan1 (= 10-20200222-1), libuchardet0 (= 0.0.6-3), libudev1 (= 244.3-1), libunistring2 (= 0.9.10-2), libuuid1 (= 2.34-0.1), libxml2 (= 2.9.10+dfsg-4), linux-libc-dev (= 5.4.19-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.2.1-1.2), man-db (= 2.9.1-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.1+20191019-1), ncurses-bin (= 6.1+20191019-1), patch (= 2.7.6-6), perl (= 5.30.0-9), perl-base (= 5.30.0-9), perl-modules-5.30 (= 5.30.0-9), po-debconf (= 1.0.21), samtools (= 1.10-3), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-2.1), tar (= 1.30+dfsg-6+b1), util-linux (= 2.34-0.1), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1562956833" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ stacks-dbgsym_2.41+dfsg-1_ppc64el.deb ------------------------------------- new Debian package, version 2.0. size 27682928 bytes: control archive=1100 bytes. 788 bytes, 12 lines control 1254 bytes, 12 lines md5sums Package: stacks-dbgsym Source: stacks Version: 2.41+dfsg-1 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 28485 Depends: stacks (= 2.41+dfsg-1) Section: debug Priority: optional Description: debug symbols for stacks Build-Ids: 0d1ed5c2a561dd07ced20033014ca6db0ffe5731 1dd97eaecd4c7b6e84672f8b07295c8bca6e78a7 3f6ce56497f5209ede29f4e7266d9f54b6f7a227 54527d344928ae6544a0085f17d7ac59c908ad40 68247656bae3047bb9e4cb69e6c172c703d00cff 7aa32b0053deb815e03c8ad1fa418c5ef85a6f6d 8828e5dca5093d14811a6df105627b9461256d30 89b7e4b929dd7896414ad6c0b4c62a234ebbbccf c59d5400f8bda0ce297b8e87c6ebcdf399544da0 e78cb77fc31e58ea1cb358e058851ea673babe9b fd2f259e7e543828a248f79b24d6040eaaf38616 drwxr-xr-x root/root 0 2019-07-12 18:40 ./ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/0d/ -rw-r--r-- root/root 2403112 2019-07-12 18:40 ./usr/lib/debug/.build-id/0d/1ed5c2a561dd07ced20033014ca6db0ffe5731.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/1d/ -rw-r--r-- root/root 2122592 2019-07-12 18:40 ./usr/lib/debug/.build-id/1d/d97eaecd4c7b6e84672f8b07295c8bca6e78a7.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/3f/ -rw-r--r-- root/root 1162968 2019-07-12 18:40 ./usr/lib/debug/.build-id/3f/6ce56497f5209ede29f4e7266d9f54b6f7a227.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/54/ -rw-r--r-- root/root 2990736 2019-07-12 18:40 ./usr/lib/debug/.build-id/54/527d344928ae6544a0085f17d7ac59c908ad40.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/68/ -rw-r--r-- root/root 2154896 2019-07-12 18:40 ./usr/lib/debug/.build-id/68/247656bae3047bb9e4cb69e6c172c703d00cff.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/7a/ -rw-r--r-- root/root 4509288 2019-07-12 18:40 ./usr/lib/debug/.build-id/7a/a32b0053deb815e03c8ad1fa418c5ef85a6f6d.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/88/ -rw-r--r-- root/root 2159848 2019-07-12 18:40 ./usr/lib/debug/.build-id/88/28e5dca5093d14811a6df105627b9461256d30.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/89/ -rw-r--r-- root/root 1862432 2019-07-12 18:40 ./usr/lib/debug/.build-id/89/b7e4b929dd7896414ad6c0b4c62a234ebbbccf.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/c5/ -rw-r--r-- root/root 2297336 2019-07-12 18:40 ./usr/lib/debug/.build-id/c5/9d5400f8bda0ce297b8e87c6ebcdf399544da0.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/e7/ -rw-r--r-- root/root 1564256 2019-07-12 18:40 ./usr/lib/debug/.build-id/e7/8cb77fc31e58ea1cb358e058851ea673babe9b.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.build-id/fd/ -rw-r--r-- root/root 4693456 2019-07-12 18:40 ./usr/lib/debug/.build-id/fd/2f259e7e543828a248f79b24d6040eaaf38616.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 1219600 2019-07-12 18:40 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/stacks.debug drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/share/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/share/doc/stacks-dbgsym -> stacks stacks_2.41+dfsg-1_ppc64el.deb ------------------------------ new Debian package, version 2.0. size 1010200 bytes: control archive=1520 bytes. 996 bytes, 21 lines control 1541 bytes, 23 lines md5sums Package: stacks Version: 2.41+dfsg-1 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 6533 Depends: libc6 (>= 2.29), libgcc-s1 (>= 3.4.4), libgomp1 (>= 6), libhts3 (>= 1.10), libstdc++6 (>= 9), zlib1g (>= 1:1.2.6), samtools, libdbi-perl Recommends: libspreadsheet-writeexcel-perl, python3 Conflicts: stacks-web Replaces: stacks-web Provides: stacks-web Section: science Priority: optional Homepage: http://creskolab.uoregon.edu/stacks/ Description: pipeline for building loci from short-read DNA sequences Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. . Note that this package installs Stacks such that all commands must be run as: $ stacks drwxr-xr-x root/root 0 2019-07-12 18:40 ./ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/bin/ -rwxr-xr-x root/root 771 2019-07-12 18:40 ./usr/bin/stacks drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/ lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/clone_filter -> ../../stacks/bin/clone_filter lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/count_fixed_catalog_snps.py -> ../../stacks/bin/count_fixed_catalog_snps.py lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/cstacks -> ../../stacks/bin/cstacks lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/denovo_map -> ../../stacks/bin/denovo_map lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/denovo_map.pl -> ../../stacks/bin/denovo_map.pl lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/gstacks -> ../../stacks/bin/gstacks lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/integrate_alignments.py -> ../../stacks/bin/integrate_alignments.py lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/kmer_filter -> ../../stacks/bin/kmer_filter lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/phasedstacks -> ../../stacks/bin/phasedstacks lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/populations -> ../../stacks/bin/populations lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/process_radtags -> ../../stacks/bin/process_radtags lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/process_shortreads -> ../../stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/ref_map -> ../../stacks/bin/ref_map lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/ref_map.pl -> ../../stacks/bin/ref_map.pl lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/sstacks -> ../../stacks/bin/sstacks lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/stacks-dist-extract -> ../../stacks/bin/stacks-dist-extract lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/stacks-gdb -> ../../stacks/bin/stacks-gdb lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/stacks-integrate-alignments -> ../../stacks/bin/stacks-integrate-alignments lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/tsv2bam -> ../../stacks/bin/tsv2bam lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/debian-med/bin/ustacks -> ../../stacks/bin/ustacks drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/stacks/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/lib/stacks/bin/ -rwxr-xr-x root/root 463464 2019-07-12 18:40 ./usr/lib/stacks/bin/clone_filter -rwxr-xr-x root/root 8652 2019-07-12 18:40 ./usr/lib/stacks/bin/count_fixed_catalog_snps.py -rwxr-xr-x root/root 594160 2019-07-12 18:40 ./usr/lib/stacks/bin/cstacks lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/stacks/bin/denovo_map -> denovo_map.pl -rwxr-xr-x root/root 22296 2019-07-12 18:40 ./usr/lib/stacks/bin/denovo_map.pl -rwxr-xr-x root/root 921184 2019-07-12 18:40 ./usr/lib/stacks/bin/gstacks -rwxr-xr-x root/root 10879 2019-07-12 18:40 ./usr/lib/stacks/bin/integrate_alignments.py -rwxr-xr-x root/root 397840 2019-07-12 18:40 ./usr/lib/stacks/bin/kmer_filter -rwxr-xr-x root/root 463128 2019-07-12 18:40 ./usr/lib/stacks/bin/phasedstacks -rwxr-xr-x root/root 1057136 2019-07-12 18:40 ./usr/lib/stacks/bin/populations -rwxr-xr-x root/root 531488 2019-07-12 18:40 ./usr/lib/stacks/bin/process_radtags -rwxr-xr-x root/root 464312 2019-07-12 18:40 ./usr/lib/stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2019-07-12 18:40 ./usr/lib/stacks/bin/ref_map -> ref_map.pl -rwxr-xr-x root/root 14547 2019-07-12 18:40 ./usr/lib/stacks/bin/ref_map.pl -rwxr-xr-x root/root 528424 2019-07-12 18:40 ./usr/lib/stacks/bin/sstacks -rwxr-xr-x root/root 773 2019-07-12 18:40 ./usr/lib/stacks/bin/stacks-dist-extract -rwxr-xr-x root/root 1207 2019-07-12 18:40 ./usr/lib/stacks/bin/stacks-gdb -rwxr-xr-x root/root 5752 2019-07-12 18:40 ./usr/lib/stacks/bin/stacks-integrate-alignments -rwxr-xr-x root/root 527792 2019-07-12 18:40 ./usr/lib/stacks/bin/tsv2bam -rwxr-xr-x root/root 594968 2019-07-12 18:40 ./usr/lib/stacks/bin/ustacks drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/share/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-07-12 18:40 ./usr/share/doc/stacks/ -rw-r--r-- root/root 1451 2019-07-12 18:40 ./usr/share/doc/stacks/README.Debian -rw-r--r-- root/root 1523 2019-07-12 18:40 ./usr/share/doc/stacks/changelog.Debian.gz -rw-r--r-- root/root 27833 2019-07-08 18:29 ./usr/share/doc/stacks/changelog.gz -rw-r--r-- root/root 1383 2019-07-12 18:40 ./usr/share/doc/stacks/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [562 B] Get:5 copy:/<>/apt_archive ./ Packages [650 B] Fetched 2175 B in 0s (116 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl ca-certificates libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libjson-xs-perl libfreezethaw-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libperl4-corelibs-perl libauthen-sasl-perl libpackage-stash-xs-perl libunicode-utf8-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libdevel-callchecker-perl libdevel-size-perl libdigest-hmac-perl libdynaloader-functions-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl libjson-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl libmailtools-perl libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsqlite3-0 libssl1.1 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl liburi-perl libvariable-magic-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:ppc64el t1utils 0 upgraded, 79 newly installed, 0 to remove and 0 not upgraded. Need to get 9436 kB of archives. After this operation, 27.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 8.0-4 [72.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline8 amd64 8.0-4 [160 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 6.1 [19.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.63-1 [35.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.3-7 [50.4 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.19-2 [529 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.31.1-3 [661 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.19-2 [889 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.36+b2 [71.3 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b2 [11.3 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1 [12.6 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b1 [15.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b2 [25.6 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1 [12.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b2 [46.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.24-1 [18.6 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libberkeleydb-perl amd64 0.62-1+b1 [124 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-2 [90.2 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-5 [105 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.46-1 [223 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1 [13.5 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b3 [38.4 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.43-2 [15.0 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b1 [26.0 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1d-2 [1540 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 4 [7148 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.88-2 [321 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.067-1 [212 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3100-1 [39.0 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.21-1 [95.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.22-1 [369 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.26-1 [27.1 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-1 [7642 B] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.10-1 [8362 B] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1 [317 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.43-1 [83.2 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.75-1 [269 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 liblinux-epoll-perl amd64 0.017-1 [16.8 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-loop-epoll-perl all 0.20-1 [11.9 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.12-1 [36.3 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-2 [101 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-perl all 4.02000-2 [88.8 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.53-1 [68.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b5 [63.6 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libmldbm-perl all 2.05-2 [18.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.001004-1 [20.8 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.003006-1 [58.7 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1 [10.2 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.38-1 [21.7 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b2 [12.0 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.008001-2 [331 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.81+repack-1 [35.4 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2+b1 [91.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.55.0 [1312 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 9436 kB in 0s (38.2 MB/s) Selecting previously unselected package readline-common. (Reading database ... 20803 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.1_all.deb ... Unpacking netbase (6.1) ... Selecting previously unselected package diffstat. Preparing to unpack .../03-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../04-libassuan0_2.5.3-7_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.19-2_amd64.deb ... Unpacking gpgconf (2.2.19-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.31.1-3_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.31.1-3) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.19-2_amd64.deb ... Unpacking gpg (2.2.19-2) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.36+b2_amd64.deb ... Unpacking libapt-pkg-perl (0.1.36+b2) ... Selecting previously unselected package libb-hooks-op-check-perl. Preparing to unpack .../09-libb-hooks-op-check-perl_0.22-1+b2_amd64.deb ... Unpacking libb-hooks-op-check-perl (0.22-1+b2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../10-libdynaloader-functions-perl_0.003-1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../11-libdevel-callchecker-perl_0.008-1+b1_amd64.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b1) ... Selecting previously unselected package libparams-classify-perl. Preparing to unpack .../12-libparams-classify-perl_0.015-1+b2_amd64.deb ... Unpacking libparams-classify-perl (0.015-1+b2) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../13-libmodule-runtime-perl_0.016-1_all.deb ... Unpacking libmodule-runtime-perl (0.016-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../14-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../15-libmodule-implementation-perl_0.09-1_all.deb ... Unpacking libmodule-implementation-perl (0.09-1) ... Selecting previously unselected package libsub-exporter-progressive-perl. Preparing to unpack .../16-libsub-exporter-progressive-perl_0.001013-1_all.deb ... Unpacking libsub-exporter-progressive-perl (0.001013-1) ... 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Setting up libapt-pkg-perl (0.1.36+b2) ... Setting up libberkeleydb-perl:amd64 (0.62-1+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libdynaloader-functions-perl (0.003-1) ... Setting up libtext-glob-perl (0.10-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up liblist-compare-perl (0.53-1) ... Setting up libio-pty-perl (1:1.12-1) ... Setting up libclone-perl (0.43-2) ... Setting up libyaml-0-2:amd64 (0.2.2-1) ... Setting up libsub-identify-perl (0.14-1+b2) ... Setting up libssl1.1:amd64 (1.1.1d-2) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdevel-size-perl (0.83-1+b1) ... Setting up libsqlite3-0:amd64 (3.31.1-3) ... Setting up libfuture-perl (0.43-1) ... Setting up libyaml-libyaml-perl (0.81+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (4) ... Setting up libmldbm-perl (2.05-2) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.3-7) ... 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Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b3) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (8.0-4) ... Setting up liburi-perl (1.76-2) ... Setting up libnet-ssleay-perl (1.88-2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.008001-2) ... Setting up libnet-dns-perl (1.22-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libio-async-loop-epoll-perl (0.20-1) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.19-2) ... Setting up libio-socket-ssl-perl (2.067-1) ... Setting up gpg (2.2.19-2) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libcgi-pm-perl (4.46-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmailtools-perl (2.21-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libemail-valid-perl (1.202-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.003006-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.55.0) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.29-10) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 508788 Build-Time: 327 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 21 Job: stacks_2.41+dfsg-1 Lintian: pass Machine Architecture: amd64 Package: stacks Package-Time: 358 Source-Version: 2.41+dfsg-1 Space: 508788 Status: successful Version: 2.41+dfsg-1 -------------------------------------------------------------------------------- Finished at 2020-02-28T20:45:31Z Build needed 00:05:58, 508788k disk space