sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | stacks 2.65+dfsg-1 (amd64) Sun, 17 Sep 2023 02:25:54 +0000 | +==============================================================================+ Package: stacks Version: 2.65+dfsg-1 Source Version: 2.65+dfsg-1 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.HYzWglk0B2... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-7gIjTl/resolver-DNgZdt' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [195 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.3 MB] Get:3 http://mirror.einval.org/debian unstable/main amd64 Packages [9603 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 Packages [9472 kB] Fetched 29.6 MB in 7s (3970 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'stacks' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/stacks.git Please use: git clone https://salsa.debian.org/med-team/stacks.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 347 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main stacks 2.65+dfsg-1 (dsc) [2040 B] Get:2 http://mirror.einval.org/debian unstable/main stacks 2.65+dfsg-1 (tar) [335 kB] Get:3 http://mirror.einval.org/debian unstable/main stacks 2.65+dfsg-1 (diff) [9460 B] Fetched 347 kB in 0s (1345 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/stacks-7gIjTl/stacks-2.65+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-7gIjTl' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [779 B] Get:5 copy:/<>/apt_archive ./ Packages [822 B] Fetched 2210 B in 0s (126 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-13-base:amd64 gcc-13-cross-base gcc-13-x86-64-linux-gnu gcc-13-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbam-dev:amd64 libbrotli1:amd64 libbz2-1.0:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcom-err2:amd64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libcurl3-gnutls:amd64 libcurl4-gnutls-dev:amd64 libdb5.3:amd64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:amd64 libdeflate0:amd64 libelf1 libfakeroot libffi8:amd64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:amd64 libgcc-13-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgmp10:amd64 libgnutls30:amd64 libgomp1:amd64 libgomp1-amd64-cross libgssapi-krb5-2:amd64 libhogweed6:amd64 libhts-dev:amd64 libhts3:amd64 libhtscodecs2:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libidn2-0:amd64 libio-string-perl libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkeyutils1:amd64 libkrb5-3:amd64 libkrb5support0:amd64 libldap-2.5-0:amd64 liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross liblzma-dev:amd64 liblzma5:amd64 libmagic-mgc libmagic1 libncurses6:amd64 libnettle8:amd64 libnghttp2-14:amd64 libnsl-dev:amd64 libnsl2:amd64 libp11-kit0:amd64 libpipeline1 libpsl5:amd64 libquadmath0:amd64 libquadmath0-amd64-cross librtmp1:amd64 libsasl2-2:amd64 libsasl2-modules-db:amd64 libsparsehash-dev libssh2-1:amd64 libssl3:amd64 libstdc++-13-dev:amd64 libstdc++-13-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsub-override-perl libtasn1-6:amd64 libtinfo6:amd64 libtirpc-dev:amd64 libtirpc3:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunistring5:amd64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:amd64 linux-libc-dev:amd64 linux-libc-dev-amd64-cross m4 man-db po-debconf samtools:amd64 sensible-utils ucf zlib1g:amd64 zlib1g-dev:amd64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch g++-13-multilib-x86-64-linux-gnu gcc-13-doc gcc-13-multilib-x86-64-linux-gnu manpages-dev flex bison gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 libnss-nisplus:amd64 manpages-dev:amd64 libcurl4-doc:amd64 libgnutls28-dev:amd64 libidn-dev:amd64 libkrb5-dev:amd64 libldap2-dev:amd64 librtmp-dev:amd64 libssh2-1-dev:amd64 pkg-config:amd64 gnutls-bin:amd64 krb5-doc:amd64 krb5-user:amd64 liblzma-doc:amd64 libstdc++-13-doc:amd64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl cwltool:amd64 Recommended packages: curl | wget | lynx ca-certificates:amd64 libarchive-cpio-perl krb5-locales:amd64 libldap-common:amd64 libgpm2:amd64 publicsuffix:amd64 libsasl2-modules:amd64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-13-base:amd64 gcc-13-cross-base gcc-13-x86-64-linux-gnu gcc-13-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbam-dev:amd64 libbrotli1:amd64 libbz2-1.0:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcom-err2:amd64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libcurl3-gnutls:amd64 libcurl4-gnutls-dev:amd64 libdb5.3:amd64 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:amd64 libdeflate0:amd64 libelf1 libfakeroot libffi8:amd64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:amd64 libgcc-13-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgmp10:amd64 libgnutls30:amd64 libgomp1:amd64 libgomp1-amd64-cross libgssapi-krb5-2:amd64 libhogweed6:amd64 libhts-dev:amd64 libhts3:amd64 libhtscodecs2:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libidn2-0:amd64 libio-string-perl libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkeyutils1:amd64 libkrb5-3:amd64 libkrb5support0:amd64 libldap-2.5-0:amd64 liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross liblzma-dev:amd64 liblzma5:amd64 libmagic-mgc libmagic1 libncurses6:amd64 libnettle8:amd64 libnghttp2-14:amd64 libnsl-dev:amd64 libnsl2:amd64 libp11-kit0:amd64 libpipeline1 libpsl5:amd64 libquadmath0:amd64 libquadmath0-amd64-cross librtmp1:amd64 libsasl2-2:amd64 libsasl2-modules-db:amd64 libsparsehash-dev libssh2-1:amd64 libssl3:amd64 libstdc++-13-dev:amd64 libstdc++-13-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libsub-override-perl libtasn1-6:amd64 libtinfo6:amd64 libtirpc-dev:amd64 libtirpc3:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunistring5:amd64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:amd64 linux-libc-dev:amd64 linux-libc-dev-amd64-cross m4 man-db po-debconf samtools:amd64 sbuild-build-depends-main-dummy:amd64 sensible-utils ucf zlib1g:amd64 zlib1g-dev:amd64 0 upgraded, 141 newly installed, 0 to remove and 0 not upgraded. Need to get 114 MB of archives. After this operation, 454 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [940 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-6 [15.0 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.20 [19.3 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-2 [314 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libmagic1 arm64 1:5.45-2 [99.9 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.45-2 [42.8 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.21-13+b1 [159 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-2 [1122 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.39.2-1 [89.1 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.11.2-3 [1368 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.21-13 [496 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 gcc-13-x86-64-linux-gnu-base arm64 13.2.0-2cross1 [39.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 cpp-13-x86-64-linux-gnu arm64 13.2.0-2cross1 [9274 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 cpp-x86-64-linux-gnu arm64 4:13.2.0-1 [4116 B] Get:22 http://mirror.einval.org/debian unstable/main arm64 cross-config all 2.6.20 [16.3 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 binutils-x86-64-linux-gnu arm64 2.41-5 [2386 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-13-cross-base all 13.2.0-2cross1 [35.2 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-amd64-cross all 13.2.0-2cross1 [57.7 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libgomp1-amd64-cross all 13.2.0-2cross1 [128 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libitm1-amd64-cross all 13.2.0-2cross1 [25.5 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libatomic1-amd64-cross all 13.2.0-2cross1 [8988 B] Get:29 http://mirror.einval.org/debian unstable/main arm64 libasan8-amd64-cross all 13.2.0-2cross1 [2552 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 liblsan0-amd64-cross all 13.2.0-2cross1 [1101 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libtsan2-amd64-cross all 13.2.0-2cross1 [2326 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libc6-amd64-cross all 2.37-3cross1 [1477 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-amd64-cross all 13.2.0-2cross1 [648 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libubsan1-amd64-cross all 13.2.0-2cross1 [1009 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libhwasan0-amd64-cross all 13.2.0-2cross1 [1153 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-amd64-cross all 13.2.0-2cross1 [145 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libgcc-13-dev-amd64-cross all 13.2.0-2cross1 [2542 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 gcc-13-x86-64-linux-gnu arm64 13.2.0-2cross1 [18.3 MB] Get:39 http://mirror.einval.org/debian unstable/main arm64 gcc-x86-64-linux-gnu arm64 4:13.2.0-1 [1472 B] Get:40 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-amd64-cross all 6.3.7-1cross1 [1917 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-amd64-cross all 2.37-3cross1 [1897 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libstdc++-13-dev-amd64-cross all 13.2.0-2cross1 [2201 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 g++-13-x86-64-linux-gnu arm64 13.2.0-2cross1 [10.1 MB] Get:44 http://mirror.einval.org/debian unstable/main arm64 g++-x86-64-linux-gnu arm64 4:13.2.0-1 [1176 B] Get:45 http://mirror.einval.org/debian unstable/main arm64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libxml2 arm64 2.9.14+dfsg-1.3 [618 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1+b1 [309 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libyaml-perl all 1.30-2 [63.4 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 dpkg-cross all 2.6.20 [25.8 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-amd64 all 12.10 [3488 B] Get:61 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.11.6 [81.9 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get:66 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:68 http://mirror.einval.org/debian unstable/main arm64 libelf1 arm64 0.189-4 [173 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1 [101 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.21-13+b1 [1249 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.11.6 [952 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.32.1-1 [27.9 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.32.1-1 [66.3 kB] Get:76 http://mirror.einval.org/debian unstable/main amd64 gcc-13-base amd64 13.2.0-4 [39.8 kB] Get:77 http://mirror.einval.org/debian unstable/main amd64 libgcc-s1 amd64 13.2.0-4 [57.7 kB] Get:78 http://mirror.einval.org/debian unstable/main amd64 libc6 amd64 2.37-10 [2755 kB] Get:79 http://mirror.einval.org/debian unstable/main amd64 libasan8 amd64 13.2.0-4 [2558 kB] Get:80 http://mirror.einval.org/debian unstable/main amd64 libatomic1 amd64 13.2.0-4 [9272 B] Get:81 http://mirror.einval.org/debian unstable/main amd64 zlib1g amd64 1:1.2.13.dfsg-3 [87.0 kB] Get:82 http://mirror.einval.org/debian unstable/main amd64 linux-libc-dev amd64 6.5.3-1 [1985 kB] Get:83 http://mirror.einval.org/debian unstable/main amd64 libcrypt1 amd64 1:4.4.36-2 [89.7 kB] Get:84 http://mirror.einval.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.36-2 [118 kB] Get:85 http://mirror.einval.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-4 [32.8 kB] Get:86 http://mirror.einval.org/debian unstable/main amd64 libcom-err2 amd64 1.47.0-2+b1 [20.1 kB] Get:87 http://mirror.einval.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-4 [79.4 kB] Get:88 http://mirror.einval.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-2 [8808 B] Get:89 http://mirror.einval.org/debian unstable/main amd64 libssl3 amd64 3.0.10-1 [2014 kB] Get:90 http://mirror.einval.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-4 [332 kB] Get:91 http://mirror.einval.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-4 [134 kB] Get:92 http://mirror.einval.org/debian unstable/main amd64 libtirpc3 amd64 1.3.3+ds-1 [85.2 kB] Get:93 http://mirror.einval.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-2 [39.5 kB] Get:94 http://mirror.einval.org/debian unstable/main amd64 libtirpc-dev amd64 1.3.3+ds-1 [191 kB] Get:95 http://mirror.einval.org/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:96 http://mirror.einval.org/debian unstable/main amd64 libc6-dev amd64 2.37-10 [1902 kB] Get:97 http://mirror.einval.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-3 [917 kB] Get:98 http://mirror.einval.org/debian unstable/main amd64 libbam-dev amd64 0.1.19+dfsg-6 [118 kB] Get:99 http://mirror.einval.org/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB] Get:100 http://mirror.einval.org/debian unstable/main amd64 libbz2-1.0 amd64 1.0.8-5+b1 [47.3 kB] Get:101 http://mirror.einval.org/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2 [557 kB] Get:102 http://mirror.einval.org/debian unstable/main amd64 libnettle8 amd64 3.9.1-2 [295 kB] Get:103 http://mirror.einval.org/debian unstable/main amd64 libhogweed6 amd64 3.9.1-2 [327 kB] Get:104 http://mirror.einval.org/debian unstable/main amd64 libunistring5 amd64 1.1-2 [421 kB] Get:105 http://mirror.einval.org/debian unstable/main amd64 libidn2-0 amd64 2.3.4-1+b1 [125 kB] Get:106 http://mirror.einval.org/debian unstable/main amd64 libffi8 amd64 3.4.4-1 [22.9 kB] Get:107 http://mirror.einval.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.0-4 [413 kB] Get:108 http://mirror.einval.org/debian unstable/main amd64 libtasn1-6 amd64 4.19.0-3 [48.3 kB] Get:109 http://mirror.einval.org/debian unstable/main amd64 libgnutls30 amd64 3.8.1-4+b1 [1418 kB] Get:110 http://mirror.einval.org/debian unstable/main amd64 libdb5.3 amd64 5.3.28+dfsg2-2 [696 kB] Get:111 http://mirror.einval.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-3 [19.3 kB] Get:112 http://mirror.einval.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-3 [56.6 kB] Get:113 http://mirror.einval.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB] Get:114 http://mirror.einval.org/debian unstable/main amd64 libnghttp2-14 amd64 1.56.0-1 [73.1 kB] Get:115 http://mirror.einval.org/debian unstable/main amd64 libpsl5 amd64 0.21.2-1+b1 [59.1 kB] Get:116 http://mirror.einval.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:117 http://mirror.einval.org/debian unstable/main amd64 libssh2-1 amd64 1.11.0-2 [214 kB] Get:118 http://mirror.einval.org/debian unstable/main amd64 libzstd1 amd64 1.5.5+dfsg2-1 [293 kB] Get:119 http://mirror.einval.org/debian unstable/main amd64 libcurl3-gnutls amd64 8.3.0-1 [399 kB] Get:120 http://mirror.einval.org/debian unstable/main amd64 libcurl4-gnutls-dev amd64 8.3.0-1 [503 kB] Get:121 http://mirror.einval.org/debian unstable/main amd64 libdeflate0 amd64 1.18-1 [40.9 kB] Get:122 http://mirror.einval.org/debian unstable/main amd64 libdeflate-dev amd64 1.18-1 [48.7 kB] Get:123 http://mirror.einval.org/debian unstable/main amd64 libgomp1 amd64 13.2.0-4 [131 kB] Get:124 http://mirror.einval.org/debian unstable/main amd64 libitm1 amd64 13.2.0-4 [26.1 kB] Get:125 http://mirror.einval.org/debian unstable/main amd64 liblsan0 amd64 13.2.0-4 [1102 kB] Get:126 http://mirror.einval.org/debian unstable/main amd64 libtsan2 amd64 13.2.0-4 [2334 kB] Get:127 http://mirror.einval.org/debian unstable/main amd64 libstdc++6 amd64 13.2.0-4 [694 kB] Get:128 http://mirror.einval.org/debian unstable/main amd64 libubsan1 amd64 13.2.0-4 [1010 kB] Get:129 http://mirror.einval.org/debian unstable/main amd64 libhwasan0 amd64 13.2.0-4 [1154 kB] Get:130 http://mirror.einval.org/debian unstable/main amd64 libquadmath0 amd64 13.2.0-4 [145 kB] Get:131 http://mirror.einval.org/debian unstable/main amd64 libgcc-13-dev amd64 13.2.0-4 [2543 kB] Get:132 http://mirror.einval.org/debian unstable/main amd64 libhtscodecs2 amd64 1.5.1-1 [91.5 kB] Get:133 http://mirror.einval.org/debian unstable/main amd64 liblzma5 amd64 5.4.4-0.1 [229 kB] Get:134 http://mirror.einval.org/debian unstable/main amd64 libhts3 amd64 1.17+ds-1 [439 kB] Get:135 http://mirror.einval.org/debian unstable/main amd64 liblzma-dev amd64 5.4.4-0.1 [282 kB] Get:136 http://mirror.einval.org/debian unstable/main amd64 libhts-dev amd64 1.17+ds-1 [1628 kB] Get:137 http://mirror.einval.org/debian unstable/main amd64 libtinfo6 amd64 6.4+20230625-2 [339 kB] Get:138 http://mirror.einval.org/debian unstable/main amd64 libncurses6 amd64 6.4+20230625-2 [103 kB] Get:139 http://mirror.einval.org/debian unstable/main arm64 libsparsehash-dev all 2.0.3-2 [76.8 kB] Get:140 http://mirror.einval.org/debian unstable/main amd64 libstdc++-13-dev amd64 13.2.0-4 [2222 kB] Get:141 http://mirror.einval.org/debian unstable/main amd64 samtools amd64 1.17-1 [628 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 114 MB in 1s (83.8 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 10424 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-6_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-2_arm64.deb ... Unpacking libmagic-mgc (1:5.45-2) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../003-libmagic1_1%3a5.45-2_arm64.deb ... Unpacking libmagic1:arm64 (1:5.45-2) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-2_arm64.deb ... Unpacking file (1:5.45-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-13+b1_arm64.deb ... Unpacking gettext-base (0.21-13+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../006-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.23.0-2_arm64.deb ... Unpacking groff-base (1.23.0-2) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.39.2-1_arm64.deb ... Unpacking bsdextrautils (2.39.2-1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../009-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.11.2-3_arm64.deb ... Unpacking man-db (2.11.2-3) ... Selecting previously unselected package ucf. Preparing to unpack .../011-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. 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Preparing to unpack .../018-cpp-13-x86-64-linux-gnu_13.2.0-2cross1_arm64.deb ... Unpacking cpp-13-x86-64-linux-gnu (13.2.0-2cross1) ... Selecting previously unselected package cpp-x86-64-linux-gnu. Preparing to unpack .../019-cpp-x86-64-linux-gnu_4%3a13.2.0-1_arm64.deb ... Unpacking cpp-x86-64-linux-gnu (4:13.2.0-1) ... Selecting previously unselected package cross-config. Preparing to unpack .../020-cross-config_2.6.20_all.deb ... Unpacking cross-config (2.6.20) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../021-binutils-x86-64-linux-gnu_2.41-5_arm64.deb ... Unpacking binutils-x86-64-linux-gnu (2.41-5) ... Selecting previously unselected package gcc-13-cross-base. Preparing to unpack .../022-gcc-13-cross-base_13.2.0-2cross1_all.deb ... Unpacking gcc-13-cross-base (13.2.0-2cross1) ... Selecting previously unselected package libgcc-s1-amd64-cross. Preparing to unpack .../023-libgcc-s1-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libgcc-s1-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libgomp1-amd64-cross. Preparing to unpack .../024-libgomp1-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libgomp1-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libitm1-amd64-cross. Preparing to unpack .../025-libitm1-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libitm1-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libatomic1-amd64-cross. Preparing to unpack .../026-libatomic1-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libatomic1-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libasan8-amd64-cross. Preparing to unpack .../027-libasan8-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libasan8-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package liblsan0-amd64-cross. Preparing to unpack .../028-liblsan0-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking liblsan0-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libtsan2-amd64-cross. Preparing to unpack .../029-libtsan2-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libtsan2-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libc6-amd64-cross. Preparing to unpack .../030-libc6-amd64-cross_2.37-3cross1_all.deb ... Unpacking libc6-amd64-cross (2.37-3cross1) ... Selecting previously unselected package libstdc++6-amd64-cross. Preparing to unpack .../031-libstdc++6-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libstdc++6-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libubsan1-amd64-cross. Preparing to unpack .../032-libubsan1-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libubsan1-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libhwasan0-amd64-cross. Preparing to unpack .../033-libhwasan0-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libhwasan0-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libquadmath0-amd64-cross. Preparing to unpack .../034-libquadmath0-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libquadmath0-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package libgcc-13-dev-amd64-cross. Preparing to unpack .../035-libgcc-13-dev-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libgcc-13-dev-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package gcc-13-x86-64-linux-gnu. Preparing to unpack .../036-gcc-13-x86-64-linux-gnu_13.2.0-2cross1_arm64.deb ... Unpacking gcc-13-x86-64-linux-gnu (13.2.0-2cross1) ... Selecting previously unselected package gcc-x86-64-linux-gnu. Preparing to unpack .../037-gcc-x86-64-linux-gnu_4%3a13.2.0-1_arm64.deb ... Unpacking gcc-x86-64-linux-gnu (4:13.2.0-1) ... Selecting previously unselected package linux-libc-dev-amd64-cross. Preparing to unpack .../038-linux-libc-dev-amd64-cross_6.3.7-1cross1_all.deb ... Unpacking linux-libc-dev-amd64-cross (6.3.7-1cross1) ... Selecting previously unselected package libc6-dev-amd64-cross. Preparing to unpack .../039-libc6-dev-amd64-cross_2.37-3cross1_all.deb ... Unpacking libc6-dev-amd64-cross (2.37-3cross1) ... Selecting previously unselected package libstdc++-13-dev-amd64-cross. Preparing to unpack .../040-libstdc++-13-dev-amd64-cross_13.2.0-2cross1_all.deb ... Unpacking libstdc++-13-dev-amd64-cross (13.2.0-2cross1) ... Selecting previously unselected package g++-13-x86-64-linux-gnu. Preparing to unpack .../041-g++-13-x86-64-linux-gnu_13.2.0-2cross1_arm64.deb ... Unpacking g++-13-x86-64-linux-gnu (13.2.0-2cross1) ... Selecting previously unselected package g++-x86-64-linux-gnu. Preparing to unpack .../042-g++-x86-64-linux-gnu_4%3a13.2.0-1_arm64.deb ... Unpacking g++-x86-64-linux-gnu (4:13.2.0-1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../043-libconfig-inifiles-perl_3.000003-2_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-2) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../044-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../045-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../046-libxml2_2.9.14+dfsg-1.3_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../047-libxml-namespacesupport-perl_1.12-2_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-2) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../048-libxml-sax-base-perl_1.09-3_all.deb ... Unpacking libxml-sax-base-perl (1.09-3) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../049-libxml-sax-perl_1.02+dfsg-3_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-3) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../050-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1_arm64.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../051-libxml-simple-perl_2.25-2_all.deb ... Unpacking libxml-simple-perl (2.25-2) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../052-libyaml-perl_1.30-2_all.deb ... Unpacking libyaml-perl (1.30-2) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../053-libconfig-auto-perl_0.44-2_all.deb ... Unpacking libconfig-auto-perl (0.44-2) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../054-libfile-which-perl_1.27-2_all.deb ... Unpacking libfile-which-perl (1.27-2) ... 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Unpacking libfakeroot:arm64 (1.32.1-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../073-fakeroot_1.32.1-1_arm64.deb ... Unpacking fakeroot (1.32.1-1) ... Selecting previously unselected package gcc-13-base:amd64. Preparing to unpack .../074-gcc-13-base_13.2.0-4_amd64.deb ... Unpacking gcc-13-base:amd64 (13.2.0-4) ... Selecting previously unselected package libgcc-s1:amd64. Preparing to unpack .../075-libgcc-s1_13.2.0-4_amd64.deb ... Unpacking libgcc-s1:amd64 (13.2.0-4) ... Selecting previously unselected package libc6:amd64. Preparing to unpack .../076-libc6_2.37-10_amd64.deb ... Unpacking libc6:amd64 (2.37-10) ... Selecting previously unselected package libasan8:amd64. Preparing to unpack .../077-libasan8_13.2.0-4_amd64.deb ... Unpacking libasan8:amd64 (13.2.0-4) ... Selecting previously unselected package libatomic1:amd64. Preparing to unpack .../078-libatomic1_13.2.0-4_amd64.deb ... Unpacking libatomic1:amd64 (13.2.0-4) ... 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Setting up gcc-13-x86-64-linux-gnu-base:arm64 (13.2.0-2cross1) ... Setting up sensible-utils (0.0.20) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libgcc-s1-amd64-cross (13.2.0-2cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libelf1:arm64 (0.189-4) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3) ... Setting up liblocale-gettext-perl (1.07-6) ... Setting up binutils-x86-64-linux-gnu (2.41-5) ... Setting up libstdc++6-amd64-cross (13.2.0-2cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-13+b1) ... Setting up libtool (2.4.7-7) ... Setting up cpp-13-x86-64-linux-gnu (13.2.0-2cross1) ... Setting up libasan8-amd64-cross (13.2.0-2cross1) ... Setting up liblsan0-amd64-cross (13.2.0-2cross1) ... Setting up libc6-dev-amd64-cross (2.37-3cross1) ... Setting up libtsan2-amd64-cross (13.2.0-2cross1) ... Setting up libgomp1-amd64-cross (13.2.0-2cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libitm1-amd64-cross (13.2.0-2cross1) ... Setting up libatomic1-amd64-cross (13.2.0-2cross1) ... Setting up libhwasan0-amd64-cross (13.2.0-2cross1) ... Setting up libubsan1-amd64-cross (13.2.0-2cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-2) ... Setting up cpp-x86-64-linux-gnu (4:13.2.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-amd64-cross (13.2.0-2cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-13-dev-amd64-cross (13.2.0-2cross1) ... Setting up gcc-13-x86-64-linux-gnu (13.2.0-2cross1) ... Setting up debhelper (13.11.6) ... Setting up libxml-simple-perl (2.25-2) ... 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Setting up libkeyutils1:amd64 (1.6.3-2) ... Setting up liblzma5:amd64 (5.4.4-0.1) ... Setting up libbrotli1:amd64 (1.0.9-2+b6) ... Setting up libssl3:amd64 (3.0.10-1) ... Setting up libnghttp2-14:amd64 (1.56.0-1) ... Setting up libdeflate0:amd64 (1.18-1) ... Setting up zlib1g:amd64 (1:1.2.13.dfsg-3) ... Setting up libcrypt1:amd64 (1:4.4.36-2) ... Setting up libcom-err2:amd64 (1.47.0-2+b1) ... Setting up libgomp1:amd64 (13.2.0-4) ... Setting up libkrb5support0:amd64 (1.20.1-4) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-3) ... Setting up libnettle8:amd64 (3.9.1-2) ... Setting up libgmp10:amd64 (2:6.3.0+dfsg-2) ... Setting up libncurses6:amd64 (6.4+20230625-2) ... Setting up libquadmath0:amd64 (13.2.0-4) ... Setting up libp11-kit0:amd64 (0.25.0-4) ... Setting up libunistring5:amd64 (1.1-2) ... Setting up libatomic1:amd64 (13.2.0-4) ... Setting up libk5crypto3:amd64 (1.20.1-4) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-3) ... Setting up liblzma-dev:amd64 (5.4.4-0.1) ... Setting up libubsan1:amd64 (13.2.0-4) ... Setting up libgcc-13-dev:amd64 (13.2.0-4) ... Setting up libcrypt-dev:amd64 (1:4.4.36-2) ... Setting up libssh2-1:amd64 (1.11.0-2) ... Setting up libkrb5-3:amd64 (1.20.1-4) ... Setting up libdeflate-dev:amd64 (1.18-1) ... Setting up libhogweed6:amd64 (3.9.1-2) ... Setting up libidn2-0:amd64 (2.3.4-1+b1) ... Setting up libgnutls30:amd64 (3.8.1-4+b1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-4) ... Setting up libtirpc3:amd64 (1.3.3+ds-1) ... Setting up libpsl5:amd64 (0.21.2-1+b1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5) ... Setting up libtirpc-dev:amd64 (1.3.3+ds-1) ... Setting up libnsl2:amd64 (1.3.0-2) ... Setting up libcurl3-gnutls:amd64 (8.3.0-1) ... Setting up libcurl4-gnutls-dev:amd64 (8.3.0-1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up libc6-dev:amd64 (2.37-10) ... Setting up libstdc++-13-dev:amd64 (13.2.0-4) ... Setting up libhts3:amd64 (1.17+ds-1) ... Setting up samtools:amd64 (1.17-1) ... Setting up zlib1g-dev:amd64 (1:1.2.13.dfsg-3) ... Setting up libhts-dev:amd64 (1.17+ds-1) ... Setting up libbam-dev:amd64 (0.1.19+dfsg-6) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-7-arm64 #1 SMP Debian 6.1.20-1 (2023-03-19) arm64 (aarch64) Toolchain package versions: binutils_2.41-5 dpkg-dev_1.22.0 g++-13_13.2.0-4 gcc-13_13.2.0-4 libc6-dev_2.37-10 libstdc++-13-dev_13.2.0-4 libstdc++-13-dev-amd64-cross_13.2.0-2cross1 libstdc++6_13.2.0-4 libstdc++6-amd64-cross_13.2.0-2cross1 linux-libc-dev_6.5.3-1 Package versions: apt_2.7.5 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.1 bash_5.2.15-2+b5 binutils_2.41-5 binutils-aarch64-linux-gnu_2.41-5 binutils-common_2.41-5 binutils-x86-64-linux-gnu_2.41-5 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.10 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:13.2.0-1 cpp-13_13.2.0-4 cpp-13-x86-64-linux-gnu_13.2.0-2cross1 cpp-x86-64-linux-gnu_4:13.2.0-1 cross-config_2.6.20 crossbuild-essential-amd64_12.10 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.6 debian-archive-keyring_2023.4 debianutils_5.12 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.22.0 dpkg-cross_2.6.20 dpkg-dev_1.22.0 dwz_0.15-1 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-1 g++-13_13.2.0-4 g++-13-x86-64-linux-gnu_13.2.0-2cross1 g++-x86-64-linux-gnu_4:13.2.0-1 gcc_4:13.2.0-1 gcc-13_13.2.0-4 gcc-13-base_13.2.0-4 gcc-13-cross-base_13.2.0-2cross1 gcc-13-x86-64-linux-gnu_13.2.0-2cross1 gcc-13-x86-64-linux-gnu-base_13.2.0-2cross1 gcc-x86-64-linux-gnu_4:13.2.0-1 gettext_0.21-13+b1 gettext-base_0.21-13+b1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-2 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.5 libarchive-zip-perl_1.68-1 libasan8_13.2.0-4 libasan8-amd64-cross_13.2.0-2cross1 libatomic1_13.2.0-4 libatomic1-amd64-cross_13.2.0-2cross1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbam-dev_0.1.19+dfsg-6 libbinutils_2.41-5 libblkid1_2.39.2-1 libbrotli1_1.0.9-2+b6 libbz2-1.0_1.0.8-5+b1 libc-bin_2.37-10 libc-dev-bin_2.37-10 libc6_2.37-10 libc6-amd64-cross_2.37-3cross1 libc6-dev_2.37-10 libc6-dev-amd64-cross_2.37-3cross1 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-4 libcc1-0_13.2.0-4 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.41-5 libctf0_2.41-5 libcurl3-gnutls_8.3.0-1 libcurl4-gnutls-dev_8.3.0-1 libdb5.3_5.3.28+dfsg2-2 libdebconfclient0_0.270 libdebhelper-perl_13.11.6 libdebian-dpkgcross-perl_2.6.20 libdeflate-dev_1.18-1 libdeflate0_1.18-1 libdpkg-perl_1.22.0 libelf1_0.189-4 libfakeroot_1.32.1-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-13-dev_13.2.0-4 libgcc-13-dev-amd64-cross_13.2.0-2cross1 libgcc-s1_13.2.0-4 libgcc-s1-amd64-cross_13.2.0-2cross1 libgcrypt20_1.10.2-2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.1-4+b1 libgomp1_13.2.0-4 libgomp1-amd64-cross_13.2.0-2cross1 libgpg-error0_1.47-2 libgprofng0_2.41-5 libgssapi-krb5-2_1.20.1-4 libhogweed6_3.9.1-2 libhts-dev_1.17+ds-1 libhts3_1.17+ds-1 libhtscodecs2_1.5.1-1 libhwasan0_13.2.0-4 libhwasan0-amd64-cross_13.2.0-2cross1 libicu72_72.1-3 libidn2-0_2.3.4-1+b1 libio-string-perl_1.08-4 libisl23_0.26-3 libitm1_13.2.0-4 libitm1-amd64-cross_13.2.0-2cross1 libjansson4_2.14-2 libk5crypto3_1.20.1-4 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-4 libkrb5support0_1.20.1-4 libldap-2.5-0_2.5.13+dfsg-5 liblocale-gettext-perl_1.07-6 liblsan0_13.2.0-4 liblsan0-amd64-cross_13.2.0-2cross1 liblz4-1_1.9.4-1 liblzma-dev_5.4.4-0.1 liblzma5_5.4.4-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.2-1 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libncurses6_6.4+20230625-2 libnettle8_3.9.1-2 libnghttp2-14_1.56.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.0-4 libpam-modules_1.5.2-7 libpam-modules-bin_1.5.2-7 libpam-runtime_1.5.2-7 libpam0g_1.5.2-7 libpcre2-8-0_10.42-4 libperl5.36_5.36.0-9 libpipeline1_1.5.7-1 libpsl5_0.21.2-1+b1 libquadmath0_13.2.0-4 libquadmath0-amd64-cross_13.2.0-2cross1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg1-3 libsasl2-modules-db_2.1.28+dfsg1-3 libseccomp2_2.5.4-1+b3 libselinux1_3.5-1 libsframe1_2.41-5 libsmartcols1_2.39.2-1 libsparsehash-dev_2.0.3-2 libssh2-1_1.11.0-2 libssl3_3.0.10-1 libstdc++-13-dev_13.2.0-4 libstdc++-13-dev-amd64-cross_13.2.0-2cross1 libstdc++6_13.2.0-4 libstdc++6-amd64-cross_13.2.0-2cross1 libsub-override-perl_0.09-4 libsystemd0_254.3-1 libtasn1-6_4.19.0-3 libtext-glob-perl_0.11-3 libtinfo6_6.4+20230625-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libtsan2_13.2.0-4 libtsan2-amd64-cross_13.2.0-2cross1 libubsan1_13.2.0-4 libubsan1-amd64-cross_13.2.0-2cross1 libuchardet0_0.0.7-1 libudev1_254.3-1 libunistring5_1.1-2 libuuid1_2.39.2-1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3 libxxhash0_0.8.2-2 libyaml-perl_1.30-2 libzstd1_1.5.5+dfsg2-1 linux-libc-dev_6.5.3-1 linux-libc-dev-amd64-cross_6.3.7-1cross1 login_1:4.13+dfsg1-1+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.11.2-3 mawk_1.3.4.20230808-1 ncurses-base_6.4+20230625-2 ncurses-bin_6.4+20230625-2 patch_2.7.6-7 perl_5.36.0-9 perl-base_5.36.0-9 perl-modules-5.36_5.36.0-9 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 samtools_1.17-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sysvinit-utils_3.07-1 tar_1.34+dfsg-1.2 ucf_3.0043+nmu1 usrmerge_37 util-linux_2.39.2-1 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: stacks Binary: stacks Architecture: any Version: 2.65+dfsg-1 Maintainer: Debian Med Packaging Team Uploaders: Tim Booth , Andreas Tille Homepage: https://creskolab.uoregon.edu/stacks/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/stacks Vcs-Git: https://salsa.debian.org/med-team/stacks.git Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev Package-List: stacks deb science optional arch=any Checksums-Sha1: feb0f3a49eb44099c31643ab6f1a4bfc53e3f36f 335124 stacks_2.65+dfsg.orig.tar.xz e5f0dc9b7b39e2701b6a6f007543d778ae10a226 9460 stacks_2.65+dfsg-1.debian.tar.xz Checksums-Sha256: 7b3feb2901a64c8681f66f3c9404192d2004981e2e6458fa4f61bc18f904aeea 335124 stacks_2.65+dfsg.orig.tar.xz dcce22e2806ad8501162368280982b169bb0340708696ad9bcd6238d6cfe504f 9460 stacks_2.65+dfsg-1.debian.tar.xz Files: 75107a175f153c12a5c358a37ad53839 335124 stacks_2.65+dfsg.orig.tar.xz 3907c0e84ecd123dc0db2feb06aa51bb 9460 stacks_2.65+dfsg-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmTvUaARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGdKA/8CX0bRh2wlE3/pNU4gV0UupKZautVhDDx gXWYtL2bu/11le90xrM7DMXZdcD/62/gXku1vtP+e7NtOAJeWSz5/hnneb9nQgyJ T40n8izFMPwIlCLNs6WhgEbvEDpds6L7Jr+udyGooskvJ03O53uBrthJfLBb5xY0 fk2MQ9gHZmNeNaubN4V9ppdnuqlpm3CKNU25RvgCIUxzEP5kzDCGUD8WUJp8lGnX QggF9/MURaiPNLcH39RBFHUrdh2KnJ8gmQLSGkJTuiIh/gwed4SHUx6gfc0AV8sb xWgpAGCn4e64mIcaPsmyzCbKyaphNHjGicXEE7eggxVvuRqwDSUyj3np9KuYuy1j h1D3Xe8Uzw8FFI3AYoUb9wNgQiGT0iJFvJ2SCUPewoRnq1gzuleCnniHrrTAPlP8 HC0zTirQfLyvxd1/ZpMC6VdhBndTY0W+0n7nwHzy4cLQtmCQuy8zFG7c9QJTJ4ZX 4y0rNOkRJAMli73bsS9gGI+rpvwBQ4J+SVhZYvqWObpsgXGl+SGhsZYKA+VUK4Ly mqtbHygSJCK8ZKP+0i9SS43abtFV8AMFBhX/2RIC3f3rL/0kkKeC8bkzZAOf3x0N x+PHwmBBnmC6dTIImpIHJk8CG2GCyktGPAauZkR8b9k/AkExxzqOrzlxEYEsTmbi WNQaOmR8SkQ= =11jp -----END PGP SIGNATURE----- gpgv: Signature made Wed Aug 30 14:26:40 2023 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./stacks_2.65+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting stacks in /<> dpkg-source: info: unpacking stacks_2.65+dfsg.orig.tar.xz dpkg-source: info: unpacking stacks_2.65+dfsg-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying RisR.patch dpkg-source: info: applying script-exe-paths dpkg-source: info: applying use_debian_packaged_htslib.patch dpkg-source: info: applying fix_spelling_errors.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aamd64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package stacks dpkg-buildpackage: info: source version 2.65+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Lance Lin dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f ./constants.php make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:28: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:28: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:28: the top level configure.ac:20: installing 'config/ar-lib' configure.ac:15: installing 'config/compile' configure.ac:42: installing 'config/config.guess' configure.ac:42: installing 'config/config.sub' configure.ac:7: installing 'config/install-sh' configure.ac:7: installing 'config/missing' Makefile.am: installing 'config/depcomp' parallel-tests: installing 'config/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-sparsehash --enable-bam \ --with-bam-include-path=/usr/include/samtools \ --with-bam-lib-path=/usr/lib ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --enable-sparsehash --enable-bam --with-bam-include-path=/usr/include/samtools --with-bam-lib-path=/usr/lib configure: loading site script /etc/dpkg-cross/cross-config.amd64 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-g++... none checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of x86_64-linux-gnu-gcc... none checking whether x86_64-linux-gnu-g++ supports C++11 features by default... yes checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking the archiver (x86_64-linux-gnu-ar) interface... ar checking for omp_set_num_threads in -lgomp... yes checking for gzread in -lz... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for float.h... yes checking for limits.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for x86_64-linux-gnu-gcc option to support OpenMP... -fopenmp checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether closedir returns void... no checking build system type... aarch64-unknown-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for GNU libc compatible malloc... (cached) yes checking for GNU libc compatible realloc... (cached) yes checking for floor... no checking for memset... yes checking for pow... no checking for sqrt... no checking for clock_gettime... yes checking for functional regular expressions... configure: WARNING: Requires g++ 4.9.0 or greater. no checking for gawk... (cached) mawk checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/ustacks.o src/ustacks.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/aln_utils.o src/aln_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/BamI.o src/BamI.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/catalog_utils.o src/catalog_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/cmb.o src/cmb.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/constants.o src/constants.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/DNANSeq.o src/DNANSeq.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/DNASeq4.o src/DNASeq4.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/DNASeq.o src/DNASeq.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/gzFasta.o src/gzFasta.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/input.o src/input.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/kmers.o src/kmers.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/locus.o src/locus.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/log_utils.o src/log_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/MetaPopInfo.o src/MetaPopInfo.cc src/MetaPopInfo.cc: In member function ‘void MetaPopInfo::fill_pop_indexes(std::map >&) const’: src/MetaPopInfo.cc:427:30: warning: narrowing conversion of ‘i’ from ‘std::size_t’ {aka ‘long unsigned int’} to ‘int’ [-Wnarrowing] 427 | pop_indexes.insert( {i, {pops_[i].first_sample, pops_[i].last_sample}} ); | ^ x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/models.o src/models.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/mstack.o src/mstack.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/mst.o src/mst.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/nucleotides.o src/nucleotides.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/renz.o src/renz.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/Seq.o src/Seq.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/sql_utilities.o src/sql_utilities.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/stacks.o src/stacks.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/utils.o src/utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/Vcf.o src/Vcf.cc rm -f libcore.a x86_64-linux-gnu-ar cru libcore.a src/aln_utils.o src/BamI.o src/catalog_utils.o src/cmb.o src/constants.o src/DNANSeq.o src/DNASeq4.o src/DNASeq.o src/gzFasta.o src/input.o src/kmers.o src/locus.o src/log_utils.o src/MetaPopInfo.o src/models.o src/mstack.o src/mst.o src/nucleotides.o src/renz.o src/Seq.o src/sql_utilities.o src/stacks.o src/utils.o src/Vcf.o x86_64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') x86_64-linux-gnu-ranlib libcore.a x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o ustacks src/ustacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/cstacks.o src/cstacks.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o cstacks src/cstacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/sstacks.o src/sstacks.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o sstacks src/sstacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/process_radtags.o src/process_radtags.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/clean.o src/clean.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/file_io.o src/file_io.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/write.o src/write.cc rm -f libclean.a x86_64-linux-gnu-ar cru libclean.a src/clean.o src/file_io.o src/write.o x86_64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') x86_64-linux-gnu-ranlib libclean.a x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o process_radtags src/process_radtags.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/process_shortreads.o src/process_shortreads.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o process_shortreads src/process_shortreads.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/kmer_filter.o src/kmer_filter.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o kmer_filter src/kmer_filter.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/clone_filter.o src/clone_filter.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o clone_filter src/clone_filter.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/populations.o src/populations.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/bootstrap.o src/bootstrap.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/export_formats.o src/export_formats.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/mapping_utils.o src/mapping_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/genotype_dictionaries.o src/genotype_dictionaries.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/PopSum.o src/PopSum.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/Hwp.o src/Hwp.cc rm -f libpop.a x86_64-linux-gnu-ar cru libpop.a src/bootstrap.o src/export_formats.o src/mapping_utils.o src/genotype_dictionaries.o src/PopSum.o src/Hwp.o x86_64-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') x86_64-linux-gnu-ranlib libpop.a x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o populations src/populations.o -lhts libcore.a libpop.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/phasedstacks.o src/phasedstacks.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o phasedstacks src/phasedstacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/tsv2bam.o src/tsv2bam.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o tsv2bam src/tsv2bam.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/gstacks.o src/gstacks.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/debruijn.o src/debruijn.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/SuffixTree.o src/SuffixTree.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o gstacks src/gstacks.o src/debruijn.o src/SuffixTree.o -lhts libcore.a -lz -lgomp make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install --no-parallel make -j1 install DESTDIR=/<>/stacks-2.65\+dfsg/debian/stacks AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' /usr/bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c ustacks cstacks sstacks process_radtags process_shortreads kmer_filter clone_filter populations phasedstacks tsv2bam gstacks '/<>/debian/stacks/usr/bin' /usr/bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c scripts/denovo_map.pl scripts/ref_map.pl scripts/stacks-integrate-alignments scripts/stacks-dist-extract scripts/stacks-gdb scripts/stacks-samtools-tview scripts/stacks-count-reads-per-sample-per-locus scripts/stacks-hist2d-loci-samples-coverage '/<>/debian/stacks/usr/bin' make install-data-hook make[5]: Entering directory '/<>' sed -e 's,_VERSION_,2.65,' -e 's,_BINDIR_,/usr/libexec/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/denovo_map.pl > /<>/debian/stacks/usr/bin/denovo_map.pl.subst mv /<>/debian/stacks/usr/bin/denovo_map.pl.subst /<>/debian/stacks/usr/bin/denovo_map.pl chmod +x /<>/debian/stacks/usr/bin/denovo_map.pl sed -e 's,_VERSION_,2.65,' -e 's,_BINDIR_,/usr/libexec/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/ref_map.pl > /<>/debian/stacks/usr/bin/ref_map.pl.subst mv /<>/debian/stacks/usr/bin/ref_map.pl.subst /<>/debian/stacks/usr/bin/ref_map.pl chmod +x /<>/debian/stacks/usr/bin/ref_map.pl sed -i.bkp -e 's,_VERSION_,2.65,' /<>/debian/stacks/usr/bin/stacks-integrate-alignments sed -i.bkp -e 's,_VERSION_,2.65,' /<>/debian/stacks/usr/bin/stacks-samtools-tview rm -f /<>/debian/stacks/usr/bin/stacks-integrate-alignments.bkp rm -f /<>/debian/stacks/usr/bin/stacks-samtools-tview.bkp chmod +x /<>/debian/stacks/usr/bin/stacks-integrate-alignments chmod +x /<>/debian/stacks/usr/bin/stacks-dist-extract chmod +x /<>/debian/stacks/usr/bin/stacks-gdb make[5]: Leaving directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' mkdir -p debian/stacks/usr/libexec/stacks mv debian/stacks/usr/bin debian/stacks/usr/libexec/stacks cd debian/stacks/usr/libexec/stacks/bin && \ for f in *.pl ; do \ ln -s "$f" "`basename $f .pl`" ; \ sed -i '1s?^#!/usr/bin/env.*perl?#!/usr/bin/perl?' $f ; \ done dh_install make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a debian/rules override_dh_link make[1]: Entering directory '/<>' dh_link mkdir -p debian/stacks/usr/libexec/debian-med/bin cd debian/stacks/usr/libexec/debian-med/bin && \ for f in `ls /<>/debian/stacks/usr/libexec/stacks/bin` ; do \ ln -s ../../stacks/bin/$f ; \ done make[1]: Leaving directory '/<>' dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'stacks' in '../stacks_2.65+dfsg-1_amd64.deb'. dpkg-deb: building package 'stacks-dbgsym' in '../stacks-dbgsym_2.65+dfsg-1_amd64.deb'. dpkg-genbuildinfo --build=any -O../stacks_2.65+dfsg-1_amd64.buildinfo dpkg-genchanges --build=any -O../stacks_2.65+dfsg-1_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-09-17T02:45:24Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ stacks_2.65+dfsg-1_amd64.changes: --------------------------------- Format: 1.8 Date: Tue, 29 Aug 2023 20:53:01 +0700 Source: stacks Binary: stacks stacks-dbgsym Built-For-Profiles: cross nocheck Architecture: amd64 Version: 2.65+dfsg-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Lance Lin Description: stacks - pipeline for building loci from short-read DNA sequences Changes: stacks (2.65+dfsg-1) unstable; urgency=medium . * Team upload. * New upstream version 2.65+dfsg * Standards-Version: 4.6.2 (routine-update) * d/copyright: Update year to 2023 for debian/* * d/patches/RisR.patch: Add patch description * d/patches/script-exe-paths: Update path to be libexec, not lib * d/rules: Update install and links paths for libexec * d/patches/fix_spelling_errors.patch: Fix spelling errors in generated binaries Checksums-Sha1: a8ff3178ebf3d94335d259837671ddd631da8469 28950928 stacks-dbgsym_2.65+dfsg-1_amd64.deb 6932f1a7c8564dd1322e4f8e2674f6a154a1ddca 5929 stacks_2.65+dfsg-1_amd64.buildinfo 138fcee7430a0177deea90ba5f49a2748453663d 1169464 stacks_2.65+dfsg-1_amd64.deb Checksums-Sha256: df4428770fedd1c56c92d5e99f5b53836f7683fd3b8916d257f3795fbe6fa957 28950928 stacks-dbgsym_2.65+dfsg-1_amd64.deb f7564af76c214bb64679c0cf8f12a908a746b33934d8c2a718ff8f6e35b80ee8 5929 stacks_2.65+dfsg-1_amd64.buildinfo 07fe350c09df78dea4237511600ab86c5affd8c25cf26324f6491df1eebf4a73 1169464 stacks_2.65+dfsg-1_amd64.deb Files: a3438c6d4e7a7d780b56aff3b5ff463b 28950928 debug optional stacks-dbgsym_2.65+dfsg-1_amd64.deb 8a32b5c54cb4607c77c22f0ccfee5e49 5929 science optional stacks_2.65+dfsg-1_amd64.buildinfo ce6a3893ea444448989d4373e56137ac 1169464 science optional stacks_2.65+dfsg-1_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: stacks Binary: stacks stacks-dbgsym Architecture: amd64 Version: 2.65+dfsg-1 Checksums-Md5: a3438c6d4e7a7d780b56aff3b5ff463b 28950928 stacks-dbgsym_2.65+dfsg-1_amd64.deb ce6a3893ea444448989d4373e56137ac 1169464 stacks_2.65+dfsg-1_amd64.deb Checksums-Sha1: a8ff3178ebf3d94335d259837671ddd631da8469 28950928 stacks-dbgsym_2.65+dfsg-1_amd64.deb 138fcee7430a0177deea90ba5f49a2748453663d 1169464 stacks_2.65+dfsg-1_amd64.deb Checksums-Sha256: df4428770fedd1c56c92d5e99f5b53836f7683fd3b8916d257f3795fbe6fa957 28950928 stacks-dbgsym_2.65+dfsg-1_amd64.deb 07fe350c09df78dea4237511600ab86c5affd8c25cf26324f6491df1eebf4a73 1169464 stacks_2.65+dfsg-1_amd64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sun, 17 Sep 2023 02:45:22 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.1), bash (= 5.2.15-2+b5), binutils (= 2.41-5), binutils-aarch64-linux-gnu (= 2.41-5), binutils-common (= 2.41-5), bsdextrautils (= 2.39.2-1), bsdutils (= 1:2.39.2-1), build-essential (= 12.10), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:13.2.0-1), cpp-13 (= 13.2.0-4), dash (= 0.5.12-6), debconf (= 1.5.82), debhelper (= 13.11.6), debianutils (= 5.12), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.22.0), dpkg-dev (= 1.22.0), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), g++ (= 4:13.2.0-1), g++-13 (= 13.2.0-4), gcc (= 4:13.2.0-1), gcc-13 (= 13.2.0-4), gcc-13-base (= 13.2.0-4), gettext (= 0.21-13+b1), gettext-base (= 0.21-13+b1), grep (= 3.11-3), groff-base (= 1.23.0-2), gzip (= 1.12-1), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 13.2.0-4), libatomic1 (= 13.2.0-4), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.1-1), libaudit1 (= 1:3.1.1-1), libbam-dev (= 0.1.19+dfsg-6), libbinutils (= 2.41-5), libblkid1 (= 2.39.2-1), libbrotli1 (= 1.0.9-2+b6), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.37-10), libc-dev-bin (= 2.37-10), libc6 (= 2.37-10), libc6-dev (= 2.37-10), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-4), libcc1-0 (= 13.2.0-4), libcom-err2 (= 1.47.0-2+b1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41-5), libctf0 (= 2.41-5), libcurl3-gnutls (= 8.3.0-1), libcurl4-gnutls-dev (= 8.3.0-1), libdb5.3 (= 5.3.28+dfsg2-2), libdebconfclient0 (= 0.270), libdebhelper-perl (= 13.11.6), libdeflate-dev (= 1.18-1), libdeflate0 (= 1.18-1), libdpkg-perl (= 1.22.0), libelf1 (= 0.189-4), libffi8 (= 3.4.4-1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-13-dev (= 13.2.0-4), libgcc-s1 (= 13.2.0-4), libgcrypt20 (= 1.10.2-2), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.3.0+dfsg-2), libgnutls30 (= 3.8.1-4+b1), libgomp1 (= 13.2.0-4), libgpg-error0 (= 1.47-2), libgprofng0 (= 2.41-5), libgssapi-krb5-2 (= 1.20.1-4), libhogweed6 (= 3.9.1-2), libhts-dev (= 1.17+ds-1), libhts3 (= 1.17+ds-1), libhtscodecs2 (= 1.5.1-1), libhwasan0 (= 13.2.0-4), libicu72 (= 72.1-3), libidn2-0 (= 2.3.4-1+b1), libisl23 (= 0.26-3), libitm1 (= 13.2.0-4), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-4), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-4), libkrb5support0 (= 1.20.1-4), libldap-2.5-0 (= 2.5.13+dfsg-5), liblsan0 (= 13.2.0-4), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.4.4-0.1), liblzma5 (= 5.4.4-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmount1 (= 2.39.2-1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libncurses6 (= 6.4+20230625-2), libnettle8 (= 3.9.1-2), libnghttp2-14 (= 1.56.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libp11-kit0 (= 0.25.0-4), libpam-modules (= 1.5.2-7), libpam-modules-bin (= 1.5.2-7), libpam-runtime (= 1.5.2-7), libpam0g (= 1.5.2-7), libpcre2-8-0 (= 10.42-4), libperl5.36 (= 5.36.0-9), libpipeline1 (= 1.5.7-1), libpsl5 (= 0.21.2-1+b1), libquadmath0 (= 13.2.0-4), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.28+dfsg1-3), libsasl2-modules-db (= 2.1.28+dfsg1-3), libseccomp2 (= 2.5.4-1+b3), libselinux1 (= 3.5-1), libsframe1 (= 2.41-5), libsmartcols1 (= 2.39.2-1), libsparsehash-dev (= 2.0.3-2), libssh2-1 (= 1.11.0-2), libssl3 (= 3.0.10-1), libstdc++-13-dev (= 13.2.0-4), libstdc++6 (= 13.2.0-4), libsub-override-perl (= 0.09-4), libsystemd0 (= 254.3-1), libtasn1-6 (= 4.19.0-3), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20230625-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-7), libtsan2 (= 13.2.0-4), libubsan1 (= 13.2.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 254.3-1), libunistring5 (= 1.1-2), libuuid1 (= 2.39.2-1), libxml2 (= 2.9.14+dfsg-1.3), libzstd1 (= 1.5.5+dfsg2-1), linux-libc-dev (= 6.5.3-1), login (= 1:4.13+dfsg1-1+b1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.11.2-3), mawk (= 1.3.4.20230808-1), ncurses-base (= 6.4+20230625-2), ncurses-bin (= 6.4+20230625-2), patch (= 2.7.6-7), perl (= 5.36.0-9), perl-base (= 5.36.0-9), perl-modules-5.36 (= 5.36.0-9), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), samtools (= 1.17-1), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.07-1), tar (= 1.34+dfsg-1.2), usrmerge (= 37), util-linux (= 2.39.2-1), xz-utils (= 5.4.4-0.1), zlib1g (= 1:1.2.13.dfsg-3), zlib1g-dev (= 1:1.2.13.dfsg-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1693317181" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ stacks-dbgsym_2.65+dfsg-1_amd64.deb ----------------------------------- new Debian package, version 2.0. size 28950928 bytes: control archive=1100 bytes. 786 bytes, 12 lines control 1249 bytes, 12 lines md5sums Package: stacks-dbgsym Source: stacks Version: 2.65+dfsg-1 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 29497 Depends: stacks (= 2.65+dfsg-1) Section: debug Priority: optional Description: debug symbols for stacks Build-Ids: 1196fad53f99dc671d7cc602e353c01ae0cf98ab 235599f3ecd5d241a252c6ee5ba93c41a01a7dda 36ce4d7ad3ffa149ff11c83b475659de1ff0d613 48f3e21b2a4a4cf38fb189f3db7234fff974fff6 7c0cfe25a045de83c10b2bd8f91b1bf16532b6ff 80ef64e0c9c5e41fd711a6afaea21036d0482dd9 84ba880b0ef613dfec380686445f8bd8124c0de3 a519ed4090b32a776b6daec950095660bfd59812 c4ea803d8e56c856a4267bdb6ae306271c079c4d de7a28455375ef81fe9c7fa7d5d4616729d43448 e33065de9679aaa37fd12ad45463f17b60ba33f1 drwxr-xr-x root/root 0 2023-08-29 13:53 ./ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/11/ -rw-r--r-- root/root 2955224 2023-08-29 13:53 ./usr/lib/debug/.build-id/11/96fad53f99dc671d7cc602e353c01ae0cf98ab.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/23/ -rw-r--r-- root/root 952344 2023-08-29 13:53 ./usr/lib/debug/.build-id/23/5599f3ecd5d241a252c6ee5ba93c41a01a7dda.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/36/ -rw-r--r-- root/root 2576568 2023-08-29 13:53 ./usr/lib/debug/.build-id/36/ce4d7ad3ffa149ff11c83b475659de1ff0d613.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/48/ -rw-r--r-- root/root 4708728 2023-08-29 13:53 ./usr/lib/debug/.build-id/48/f3e21b2a4a4cf38fb189f3db7234fff974fff6.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/7c/ -rw-r--r-- root/root 5593176 2023-08-29 13:53 ./usr/lib/debug/.build-id/7c/0cfe25a045de83c10b2bd8f91b1bf16532b6ff.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/80/ -rw-r--r-- root/root 1807152 2023-08-29 13:53 ./usr/lib/debug/.build-id/80/ef64e0c9c5e41fd711a6afaea21036d0482dd9.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/84/ -rw-r--r-- root/root 2004200 2023-08-29 13:53 ./usr/lib/debug/.build-id/84/ba880b0ef613dfec380686445f8bd8124c0de3.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/a5/ -rw-r--r-- root/root 2342880 2023-08-29 13:53 ./usr/lib/debug/.build-id/a5/19ed4090b32a776b6daec950095660bfd59812.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/c4/ -rw-r--r-- root/root 2111232 2023-08-29 13:53 ./usr/lib/debug/.build-id/c4/ea803d8e56c856a4267bdb6ae306271c079c4d.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/de/ -rw-r--r-- root/root 1378128 2023-08-29 13:53 ./usr/lib/debug/.build-id/de/7a28455375ef81fe9c7fa7d5d4616729d43448.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.build-id/e3/ -rw-r--r-- root/root 2303784 2023-08-29 13:53 ./usr/lib/debug/.build-id/e3/3065de9679aaa37fd12ad45463f17b60ba33f1.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 1443664 2023-08-29 13:53 ./usr/lib/debug/.dwz/x86_64-linux-gnu/stacks.debug drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/share/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/share/doc/ lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/share/doc/stacks-dbgsym -> stacks stacks_2.65+dfsg-1_amd64.deb ---------------------------- new Debian package, version 2.0. size 1169464 bytes: control archive=1588 bytes. 962 bytes, 19 lines control 1786 bytes, 25 lines md5sums Package: stacks Version: 2.65+dfsg-1 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 5761 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libhts3 (>= 1.17), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.6), samtools, libdbi-perl Recommends: libspreadsheet-writeexcel-perl, python3, littler Provides: stacks-web Section: science Priority: optional Homepage: https://creskolab.uoregon.edu/stacks/ Description: pipeline for building loci from short-read DNA sequences Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. . Note that this package installs Stacks such that all commands must be run as: $ stacks drwxr-xr-x root/root 0 2023-08-29 13:53 ./ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/bin/ -rwxr-xr-x root/root 771 2023-08-29 13:53 ./usr/bin/stacks drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/libexec/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/ lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/clone_filter -> ../../stacks/bin/clone_filter lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/cstacks -> ../../stacks/bin/cstacks lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/denovo_map -> ../../stacks/bin/denovo_map lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/denovo_map.pl -> ../../stacks/bin/denovo_map.pl lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/gstacks -> ../../stacks/bin/gstacks lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/kmer_filter -> ../../stacks/bin/kmer_filter lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/phasedstacks -> ../../stacks/bin/phasedstacks lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/populations -> ../../stacks/bin/populations lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/process_radtags -> ../../stacks/bin/process_radtags lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/process_shortreads -> ../../stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/ref_map -> ../../stacks/bin/ref_map lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/ref_map.pl -> ../../stacks/bin/ref_map.pl lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/sstacks -> ../../stacks/bin/sstacks lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/stacks-count-reads-per-sample-per-locus -> ../../stacks/bin/stacks-count-reads-per-sample-per-locus lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/stacks-dist-extract -> ../../stacks/bin/stacks-dist-extract lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/stacks-gdb -> ../../stacks/bin/stacks-gdb lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/stacks-hist2d-loci-samples-coverage -> ../../stacks/bin/stacks-hist2d-loci-samples-coverage lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/stacks-integrate-alignments -> ../../stacks/bin/stacks-integrate-alignments lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/stacks-samtools-tview -> ../../stacks/bin/stacks-samtools-tview lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/tsv2bam -> ../../stacks/bin/tsv2bam lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/debian-med/bin/ustacks -> ../../stacks/bin/ustacks drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/libexec/stacks/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/libexec/stacks/bin/ -rwxr-xr-x root/root 373368 2023-08-29 13:53 ./usr/libexec/stacks/bin/clone_filter -rwxr-xr-x root/root 483608 2023-08-29 13:53 ./usr/libexec/stacks/bin/cstacks lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/stacks/bin/denovo_map -> denovo_map.pl -rwxr-xr-x root/root 32838 2023-08-29 13:53 ./usr/libexec/stacks/bin/denovo_map.pl -rwxr-xr-x root/root 806536 2023-08-29 13:53 ./usr/libexec/stacks/bin/gstacks -rwxr-xr-x root/root 279064 2023-08-29 13:53 ./usr/libexec/stacks/bin/kmer_filter -rwxr-xr-x root/root 368920 2023-08-29 13:53 ./usr/libexec/stacks/bin/phasedstacks -rwxr-xr-x root/root 1117624 2023-08-29 13:53 ./usr/libexec/stacks/bin/populations -rwxr-xr-x root/root 515480 2023-08-29 13:53 ./usr/libexec/stacks/bin/process_radtags -rwxr-xr-x root/root 382392 2023-08-29 13:53 ./usr/libexec/stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2023-08-29 13:53 ./usr/libexec/stacks/bin/ref_map -> ref_map.pl -rwxr-xr-x root/root 15364 2023-08-29 13:53 ./usr/libexec/stacks/bin/ref_map.pl -rwxr-xr-x root/root 450616 2023-08-29 13:53 ./usr/libexec/stacks/bin/sstacks -rwxr-xr-x root/root 1040 2023-08-29 13:53 ./usr/libexec/stacks/bin/stacks-count-reads-per-sample-per-locus -rwxr-xr-x root/root 1168 2023-08-29 13:53 ./usr/libexec/stacks/bin/stacks-dist-extract -rwxr-xr-x root/root 1207 2023-08-29 13:53 ./usr/libexec/stacks/bin/stacks-gdb -rwxr-xr-x root/root 1773 2023-08-29 13:53 ./usr/libexec/stacks/bin/stacks-hist2d-loci-samples-coverage -rwxr-xr-x root/root 22272 2023-08-29 13:53 ./usr/libexec/stacks/bin/stacks-integrate-alignments -rwxr-xr-x root/root 3037 2023-08-29 13:53 ./usr/libexec/stacks/bin/stacks-samtools-tview -rwxr-xr-x root/root 470440 2023-08-29 13:53 ./usr/libexec/stacks/bin/tsv2bam -rwxr-xr-x root/root 484376 2023-08-29 13:53 ./usr/libexec/stacks/bin/ustacks drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/share/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-08-29 13:53 ./usr/share/doc/stacks/ -rw-r--r-- root/root 229 2023-08-29 13:53 ./usr/share/doc/stacks/NEWS.Debian.gz -rw-r--r-- root/root 1451 2023-08-29 13:53 ./usr/share/doc/stacks/README.Debian -rw-r--r-- root/root 1069 2023-08-29 13:53 ./usr/share/doc/stacks/changelog.Debian.gz -rw-r--r-- root/root 31229 2023-08-18 16:30 ./usr/share/doc/stacks/changelog.gz -rw-r--r-- root/root 1730 2023-08-29 13:53 ./usr/share/doc/stacks/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1361 B] Get:5 copy:/<>/apt_archive ./ Packages [1440 B] Fetched 3416 B in 0s (195 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:amd64 t1utils unzip 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 13.5 MB of archives. After this operation, 53.2 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [844 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.0.10-1 [1382 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20230311 [153 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.65-1 [31.2 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libassuan0 arm64 2.5.6-1 [47.3 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libreadline8 arm64 8.2-1.3 [155 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.2.40-1.1 [557 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.43.1-1 [812 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.2.40-1.1 [903 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.40+b2 [66.1 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-2+b1 [10.4 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.008-2 [15.9 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b1 [22.9 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.63-1+b1 [42.8 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.64-2+b1 [121 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.21-1 [95.6 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.81-1 [98.6 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.57-1 [221 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b1 [35.3 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.46-1 [13.5 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.29-1 [16.5 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-2+b1 [24.2 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.37-1 [129 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-1+b1 [34.0 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b1 [98.8 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.83-2+b1 [24.2 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b1 [28.3 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 6.44-2 [81.8 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b1 [7924 B] Get:73 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.92-2+b1 [308 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.083-1 [218 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.72-1 [187 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.13-6 [39.0 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-2 [51.8 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2 [34.1 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:96 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.5.10-1+b3 [167 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-3 [10.9 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.27-1 [12.3 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:101 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b1 [17.1 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1 [11.2 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.636-1 [42.3 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.004+ds-1 [95.4 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.004+ds-1 [97.2 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:109 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.38-1 [58.7 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.29-1 [28.5 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b1 [24.1 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b1 [8396 B] Get:113 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.16-1 [13.0 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-1+b2 [196 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.44-2+b1 [72.2 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.62-2 [19.9 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1 [50.4 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.86+ds-1 [32.8 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.10-6 [58.0 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-28 [157 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.5 MB in 0s (29.7 MB/s) Selecting previously unselected package netbase. 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Setting up plzip (1.10-6) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:arm64 (0.46-1) ... Setting up libyaml-0-2:arm64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:arm64 (4.37-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:arm64 (3.43.1-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:arm64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:arm64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:arm64 (2.5.6-1) ... Setting up libconfig-tiny-perl (2.29-1) ... Setting up libsereal-encoder-perl (5.004+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004005-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.38-1) ... Setting up libipc-system-simple-perl (1.30-2) ... 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Setting up libnet-ssleay-perl:arm64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:arm64 (8.2-1.3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:arm64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.083-1) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.44-2) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:arm64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.57-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-10) ... Processing triggers for man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 370256 Build-Time: 1082 Distribution: unstable Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 53 Job: stacks_2.65+dfsg-1 Lintian: pass Machine Architecture: arm64 Package: stacks Package-Time: 1170 Source-Version: 2.65+dfsg-1 Space: 370256 Status: successful Version: 2.65+dfsg-1 -------------------------------------------------------------------------------- Finished at 2023-09-17T02:45:24Z Build needed 00:19:30, 370256k disk space