sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | stacks 2.65+dfsg-2 (ppc64el) Thu, 21 Sep 2023 19:17:30 +0000 | +==============================================================================+ Package: stacks Version: 2.65+dfsg-2 Source Version: 2.65+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-1211ccda-dda3-4046-879c-a74b74207d91' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-zaI99a/resolver-LZFaHm' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [195 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-09-21-1406.46-F-2023-09-21-0211.33.pdiff [30.9 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-09-21-1406.46-F-2023-09-21-0211.33.pdiff [79.0 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-09-21-1406.46-F-2023-09-21-0211.33.pdiff [30.9 kB] Get:6 http://localhost:3142/debian sid/main ppc64el Packages [9415 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-09-21-1406.46-F-2023-09-21-0211.33.pdiff [79.0 kB] Fetched 9847 kB in 3s (3600 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libsystemd0 libudev1 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 477 kB of archives. After this operation, 2048 B of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 libsystemd0 amd64 254.4-1 [357 kB] Get:2 http://localhost:3142/debian sid/main amd64 libudev1 amd64 254.4-1 [120 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 477 kB in 0s (4825 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14612 files and directories currently installed.) Preparing to unpack .../libsystemd0_254.4-1_amd64.deb ... Unpacking libsystemd0:amd64 (254.4-1) over (254.3-1) ... Setting up libsystemd0:amd64 (254.4-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 14612 files and directories currently installed.) Preparing to unpack .../libudev1_254.4-1_amd64.deb ... Unpacking libudev1:amd64 (254.4-1) over (254.3-1) ... Setting up libudev1:amd64 (254.4-1) ... Processing triggers for libc-bin (2.37-10) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'stacks' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/stacks.git Please use: git clone https://salsa.debian.org/med-team/stacks.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 349 kB of source archives. Get:1 http://localhost:3142/debian sid/main stacks 2.65+dfsg-2 (dsc) [2066 B] Get:2 http://localhost:3142/debian sid/main stacks 2.65+dfsg-2 (tar) [335 kB] Get:3 http://localhost:3142/debian sid/main stacks 2.65+dfsg-2 (diff) [12.1 kB] Fetched 349 kB in 0s (0 B/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/stacks-zaI99a/stacks-2.65+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-zaI99a' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [785 B] Get:5 copy:/<>/apt_archive ./ Packages [830 B] Fetched 2224 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-13-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-13-base:ppc64el gcc-13-cross-base gcc-13-powerpc64le-linux-gnu gcc-13-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbam-dev:ppc64el libbrotli1:ppc64el libbz2-1.0:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libcurl4-gnutls-dev:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:ppc64el libdeflate0:ppc64el libelf1 libffi8:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-13-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libhogweed6:ppc64el libhts-dev:ppc64el libhts3:ppc64el libhtscodecs2:ppc64el libicu72 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.5-0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses6:ppc64el libnettle8:ppc64el libnghttp2-14:ppc64el libnsl-dev:ppc64el libnsl2:ppc64el libp11-kit0:ppc64el libpipeline1 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libsparsehash-dev libssh2-1:ppc64el libssl3:ppc64el libstdc++-11-dev:ppc64el libstdc++-13-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtasn1-6:ppc64el libtinfo6:ppc64el libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring5:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:ppc64el linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf samtools:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el manpages-dev:ppc64el libcurl4-doc:ppc64el libgnutls28-dev:ppc64el libidn-dev:ppc64el libkrb5-dev:ppc64el libldap2-dev:ppc64el librtmp-dev:ppc64el libssh2-1-dev:ppc64el pkg-config:ppc64el gnutls-bin:ppc64el krb5-doc:ppc64el krb5-user:ppc64el liblzma-doc:ppc64el libstdc++-11-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl cwltool:ppc64el Recommended packages: curl | wget | lynx ca-certificates:ppc64el libarchive-cpio-perl krb5-locales:ppc64el libldap-common:ppc64el libgpm2:ppc64el publicsuffix:ppc64el libsasl2-modules:ppc64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils cpp-13-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-13-base:ppc64el gcc-13-cross-base gcc-13-powerpc64le-linux-gnu gcc-13-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:ppc64el libasan8-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbam-dev:ppc64el libbrotli1:ppc64el libbz2-1.0:ppc64el libc6:ppc64el libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl3-gnutls:ppc64el libcurl4-gnutls-dev:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:ppc64el libdeflate0:ppc64el libelf1 libffi8:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-13-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libhogweed6:ppc64el libhts-dev:ppc64el libhts3:ppc64el libhtscodecs2:ppc64el libicu72 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el libldap-2.5-0:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross liblzma-dev:ppc64el liblzma5:ppc64el libmagic-mgc libmagic1 libncurses6:ppc64el libnettle8:ppc64el libnghttp2-14:ppc64el libnsl-dev:ppc64el libnsl2:ppc64el libp11-kit0:ppc64el libpipeline1 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librtmp1:ppc64el libsasl2-2:ppc64el libsasl2-modules-db:ppc64el libsparsehash-dev libssh2-1:ppc64el libssl3:ppc64el libstdc++-11-dev:ppc64el libstdc++-13-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libtasn1-6:ppc64el libtinfo6:ppc64el libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan2-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring5:ppc64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:ppc64el linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db po-debconf samtools:ppc64el sbuild-build-depends-main-dummy:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 138 newly installed, 0 to remove and 0 not upgraded. Need to get 109 MB of archives. After this operation, 444 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-6 [15.3 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.20 [19.3 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-2 [314 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.45-2 [105 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-2 [42.8 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-13+b1 [161 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-2 [1176 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.2-1 [88.7 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.2-3 [1386 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-13 [496 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-powerpc64le-linux-gnu amd64 2.41-5 [2775 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-13-powerpc64le-linux-gnu-base amd64 13.2.0-2cross1 [39.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-13-powerpc64le-linux-gnu amd64 13.2.0-2cross1 [9173 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-powerpc64le-linux-gnu amd64 4:13.2.0-1 [4124 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-2cross1 [35.2 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-ppc64el-cross all 2.37-3cross1 [1349 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-ppc64el-cross all 13.2.0-2cross1 [35.0 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-ppc64el-cross all 13.2.0-2cross1 [134 kB] Get:28 http://localhost:3142/debian sid/main amd64 libitm1-ppc64el-cross all 13.2.0-2cross1 [28.3 kB] Get:29 http://localhost:3142/debian sid/main amd64 libatomic1-ppc64el-cross all 13.2.0-2cross1 [9476 B] Get:30 http://localhost:3142/debian sid/main amd64 libasan8-ppc64el-cross all 13.2.0-2cross1 [2516 kB] Get:31 http://localhost:3142/debian sid/main amd64 liblsan0-ppc64el-cross all 13.2.0-2cross1 [1113 kB] Get:32 http://localhost:3142/debian sid/main amd64 libtsan2-ppc64el-cross all 13.2.0-2cross1 [2352 kB] Get:33 http://localhost:3142/debian sid/main amd64 libstdc++6-ppc64el-cross all 13.2.0-2cross1 [727 kB] Get:34 http://localhost:3142/debian sid/main amd64 libubsan1-ppc64el-cross all 13.2.0-2cross1 [1022 kB] Get:35 http://localhost:3142/debian sid/main amd64 libquadmath0-ppc64el-cross all 13.2.0-2cross1 [149 kB] Get:36 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-ppc64el-cross all 13.2.0-2cross1 [1374 kB] Get:37 http://localhost:3142/debian sid/main amd64 gcc-13-powerpc64le-linux-gnu amd64 13.2.0-2cross1 [18.0 MB] Get:38 http://localhost:3142/debian sid/main amd64 gcc-powerpc64le-linux-gnu amd64 4:13.2.0-1 [1480 B] Get:39 http://localhost:3142/debian sid/main amd64 linux-libc-dev-ppc64el-cross all 6.3.7-1cross1 [1908 kB] Get:40 http://localhost:3142/debian sid/main amd64 libc6-dev-ppc64el-cross all 2.37-3cross1 [1812 kB] Get:41 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-ppc64el-cross all 13.2.0-2cross1 [2287 kB] Get:42 http://localhost:3142/debian sid/main amd64 g++-13-powerpc64le-linux-gnu amd64 13.2.0-2cross1 [10.1 MB] Get:43 http://localhost:3142/debian sid/main amd64 g++-powerpc64le-linux-gnu amd64 4:13.2.0-1 [1184 B] Get:44 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:45 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:46 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3 [686 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:49 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:50 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:51 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:52 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:53 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:54 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:56 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:58 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 crossbuild-essential-ppc64el all 12.10 [3492 B] Get:60 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.6 [81.9 kB] Get:61 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:63 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:64 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:65 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:66 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:67 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.189-4 [174 kB] Get:68 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:69 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-13+b1 [1301 kB] Get:70 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:71 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:72 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.6 [952 kB] Get:73 http://localhost:3142/debian sid/main ppc64el gcc-11-base ppc64el 11.4.0-4 [39.6 kB] Get:74 http://localhost:3142/debian sid/main ppc64el gcc-13-base ppc64el 13.2.0-4 [39.8 kB] Get:75 http://localhost:3142/debian sid/main ppc64el libgcc-s1 ppc64el 13.2.0-4 [35.0 kB] Get:76 http://localhost:3142/debian sid/main ppc64el libc6 ppc64el 2.37-10 [2679 kB] Get:77 http://localhost:3142/debian sid/main ppc64el libasan6 ppc64el 11.4.0-4 [2035 kB] Get:78 http://localhost:3142/debian sid/main ppc64el libatomic1 ppc64el 13.2.0-4 [9768 B] Get:79 http://localhost:3142/debian sid/main ppc64el zlib1g ppc64el 1:1.2.13.dfsg-3 [85.6 kB] Get:80 http://localhost:3142/debian sid/main ppc64el linux-libc-dev ppc64el 6.5.3-1 [1975 kB] Get:81 http://localhost:3142/debian sid/main ppc64el libcrypt1 ppc64el 1:4.4.36-2 [98.0 kB] Get:82 http://localhost:3142/debian sid/main ppc64el libcrypt-dev ppc64el 1:4.4.36-2 [132 kB] Get:83 http://localhost:3142/debian sid/main ppc64el libkrb5support0 ppc64el 1.20.1-4 [36.1 kB] Get:84 http://localhost:3142/debian sid/main ppc64el libcom-err2 ppc64el 1.47.0-2+b1 [20.5 kB] Get:85 http://localhost:3142/debian sid/main ppc64el libk5crypto3 ppc64el 1.20.1-4 [90.3 kB] Get:86 http://localhost:3142/debian sid/main ppc64el libkeyutils1 ppc64el 1.6.3-2 [10.0 kB] Get:87 http://localhost:3142/debian sid/main ppc64el libssl3 ppc64el 3.0.11-1 [2027 kB] Get:88 http://localhost:3142/debian sid/main ppc64el libkrb5-3 ppc64el 1.20.1-4 [364 kB] Get:89 http://localhost:3142/debian sid/main ppc64el libgssapi-krb5-2 ppc64el 1.20.1-4 [148 kB] Get:90 http://localhost:3142/debian sid/main ppc64el libtirpc3 ppc64el 1.3.3+ds-1 [96.7 kB] Get:91 http://localhost:3142/debian sid/main ppc64el libnsl2 ppc64el 1.3.0-2 [44.8 kB] Get:92 http://localhost:3142/debian sid/main ppc64el libtirpc-dev ppc64el 1.3.3+ds-1 [209 kB] Get:93 http://localhost:3142/debian sid/main ppc64el libnsl-dev ppc64el 1.3.0-2 [73.6 kB] Get:94 http://localhost:3142/debian sid/main ppc64el libc6-dev ppc64el 2.37-10 [1815 kB] Get:95 http://localhost:3142/debian sid/main ppc64el zlib1g-dev ppc64el 1:1.2.13.dfsg-3 [916 kB] Get:96 http://localhost:3142/debian sid/main ppc64el libbam-dev ppc64el 0.1.19+dfsg-6 [131 kB] Get:97 http://localhost:3142/debian sid/main ppc64el libbrotli1 ppc64el 1.0.9-2+b6 [295 kB] Get:98 http://localhost:3142/debian sid/main ppc64el libbz2-1.0 ppc64el 1.0.8-5+b1 [51.8 kB] Get:99 http://localhost:3142/debian sid/main ppc64el libgmp10 ppc64el 2:6.3.0+dfsg-2 [571 kB] Get:100 http://localhost:3142/debian sid/main ppc64el libnettle8 ppc64el 3.9.1-2 [318 kB] Get:101 http://localhost:3142/debian sid/main ppc64el libhogweed6 ppc64el 3.9.1-2 [331 kB] Get:102 http://localhost:3142/debian sid/main ppc64el libunistring5 ppc64el 1.1-2 [433 kB] Get:103 http://localhost:3142/debian sid/main ppc64el libidn2-0 ppc64el 2.3.4-1+b1 [128 kB] Get:104 http://localhost:3142/debian sid/main ppc64el libffi8 ppc64el 3.4.4-1 [23.5 kB] Get:105 http://localhost:3142/debian sid/main ppc64el libp11-kit0 ppc64el 0.25.0-4 [397 kB] Get:106 http://localhost:3142/debian sid/main ppc64el libtasn1-6 ppc64el 4.19.0-3 [52.5 kB] Get:107 http://localhost:3142/debian sid/main ppc64el libgnutls30 ppc64el 3.8.1-4+b1 [1382 kB] Get:108 http://localhost:3142/debian sid/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg2-2 [725 kB] Get:109 http://localhost:3142/debian sid/main ppc64el libsasl2-modules-db ppc64el 2.1.28+dfsg1-3 [21.7 kB] Get:110 http://localhost:3142/debian sid/main ppc64el libsasl2-2 ppc64el 2.1.28+dfsg1-3 [65.6 kB] Get:111 http://localhost:3142/debian sid/main ppc64el libldap-2.5-0 ppc64el 2.5.13+dfsg-5 [201 kB] Get:112 http://localhost:3142/debian sid/main ppc64el libnghttp2-14 ppc64el 1.56.0-1 [80.9 kB] Get:113 http://localhost:3142/debian sid/main ppc64el libpsl5 ppc64el 0.21.2-1+b1 [60.9 kB] Get:114 http://localhost:3142/debian sid/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2+b2 [65.9 kB] Get:115 http://localhost:3142/debian sid/main ppc64el libssh2-1 ppc64el 1.11.0-2 [226 kB] Get:116 http://localhost:3142/debian sid/main ppc64el libzstd1 ppc64el 1.5.5+dfsg2-2 [312 kB] Get:117 http://localhost:3142/debian sid/main ppc64el libcurl3-gnutls ppc64el 8.3.0-1 [420 kB] Get:118 http://localhost:3142/debian sid/main ppc64el libcurl4-gnutls-dev ppc64el 8.3.0-1 [536 kB] Get:119 http://localhost:3142/debian sid/main ppc64el libdeflate0 ppc64el 1.18-1 [41.0 kB] Get:120 http://localhost:3142/debian sid/main ppc64el libdeflate-dev ppc64el 1.18-1 [48.6 kB] Get:121 http://localhost:3142/debian sid/main ppc64el libgomp1 ppc64el 13.2.0-4 [136 kB] Get:122 http://localhost:3142/debian sid/main ppc64el libitm1 ppc64el 13.2.0-4 [28.8 kB] Get:123 http://localhost:3142/debian sid/main ppc64el liblsan0 ppc64el 13.2.0-4 [1114 kB] Get:124 http://localhost:3142/debian sid/main ppc64el libtsan0 ppc64el 11.4.0-4 [2022 kB] Get:125 http://localhost:3142/debian sid/main ppc64el libstdc++6 ppc64el 13.2.0-4 [776 kB] Get:126 http://localhost:3142/debian sid/main ppc64el libubsan1 ppc64el 13.2.0-4 [1023 kB] Get:127 http://localhost:3142/debian sid/main ppc64el libquadmath0 ppc64el 13.2.0-4 [150 kB] Get:128 http://localhost:3142/debian sid/main ppc64el libgcc-11-dev ppc64el 11.4.0-4 [1268 kB] Get:129 http://localhost:3142/debian sid/main ppc64el libhtscodecs2 ppc64el 1.5.1-1 [79.0 kB] Get:130 http://localhost:3142/debian sid/main ppc64el liblzma5 ppc64el 5.4.4-0.1 [237 kB] Get:131 http://localhost:3142/debian sid/main ppc64el libhts3 ppc64el 1.17+ds-1 [474 kB] Get:132 http://localhost:3142/debian sid/main ppc64el liblzma-dev ppc64el 5.4.4-0.1 [293 kB] Get:133 http://localhost:3142/debian sid/main ppc64el libhts-dev ppc64el 1.17+ds-1 [1658 kB] Get:134 http://localhost:3142/debian sid/main ppc64el libtinfo6 ppc64el 6.4+20230625-2 [346 kB] Get:135 http://localhost:3142/debian sid/main ppc64el libncurses6 ppc64el 6.4+20230625-2 [117 kB] Get:136 http://localhost:3142/debian sid/main amd64 libsparsehash-dev all 2.0.3-2 [76.8 kB] Get:137 http://localhost:3142/debian sid/main ppc64el libstdc++-11-dev ppc64el 11.4.0-4 [2064 kB] Get:138 http://localhost:3142/debian sid/main ppc64el samtools ppc64el 1.17-1 [654 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 109 MB in 1s (184 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 14612 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-6_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-2_amd64.deb ... Unpacking libmagic-mgc (1:5.45-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.45-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.45-2) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-2_amd64.deb ... Unpacking file (1:5.45-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-13+b1_amd64.deb ... Unpacking gettext-base (0.21-13+b1) ... 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Unpacking libconfig-inifiles-perl (3.000003-2) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../043-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../044-libicu72_72.1-3_amd64.deb ... Unpacking libicu72:amd64 (72.1-3) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../045-libxml2_2.9.14+dfsg-1.3_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../046-libxml-namespacesupport-perl_1.12-2_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-2) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../047-libxml-sax-base-perl_1.09-3_all.deb ... Unpacking libxml-sax-base-perl (1.09-3) ... Selecting previously unselected package libxml-sax-perl. 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Selecting previously unselected package libnsl2:ppc64el. Preparing to unpack .../089-libnsl2_1.3.0-2_ppc64el.deb ... Unpacking libnsl2:ppc64el (1.3.0-2) ... Selecting previously unselected package libtirpc-dev:ppc64el. Preparing to unpack .../090-libtirpc-dev_1.3.3+ds-1_ppc64el.deb ... Unpacking libtirpc-dev:ppc64el (1.3.3+ds-1) ... Selecting previously unselected package libnsl-dev:ppc64el. Preparing to unpack .../091-libnsl-dev_1.3.0-2_ppc64el.deb ... Unpacking libnsl-dev:ppc64el (1.3.0-2) ... Selecting previously unselected package libc6-dev:ppc64el. Preparing to unpack .../092-libc6-dev_2.37-10_ppc64el.deb ... Unpacking libc6-dev:ppc64el (2.37-10) ... Selecting previously unselected package zlib1g-dev:ppc64el. Preparing to unpack .../093-zlib1g-dev_1%3a1.2.13.dfsg-3_ppc64el.deb ... Unpacking zlib1g-dev:ppc64el (1:1.2.13.dfsg-3) ... Selecting previously unselected package libbam-dev:ppc64el. Preparing to unpack .../094-libbam-dev_0.1.19+dfsg-6_ppc64el.deb ... Unpacking libbam-dev:ppc64el (0.1.19+dfsg-6) ... Selecting previously unselected package libbrotli1:ppc64el. Preparing to unpack .../095-libbrotli1_1.0.9-2+b6_ppc64el.deb ... Unpacking libbrotli1:ppc64el (1.0.9-2+b6) ... Selecting previously unselected package libbz2-1.0:ppc64el. Preparing to unpack .../096-libbz2-1.0_1.0.8-5+b1_ppc64el.deb ... Unpacking libbz2-1.0:ppc64el (1.0.8-5+b1) ... Selecting previously unselected package libgmp10:ppc64el. Preparing to unpack .../097-libgmp10_2%3a6.3.0+dfsg-2_ppc64el.deb ... Unpacking libgmp10:ppc64el (2:6.3.0+dfsg-2) ... Selecting previously unselected package libnettle8:ppc64el. Preparing to unpack .../098-libnettle8_3.9.1-2_ppc64el.deb ... Unpacking libnettle8:ppc64el (3.9.1-2) ... Selecting previously unselected package libhogweed6:ppc64el. Preparing to unpack .../099-libhogweed6_3.9.1-2_ppc64el.deb ... Unpacking libhogweed6:ppc64el (3.9.1-2) ... Selecting previously unselected package libunistring5:ppc64el. 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Selecting previously unselected package libdb5.3:ppc64el. Preparing to unpack .../106-libdb5.3_5.3.28+dfsg2-2_ppc64el.deb ... Unpacking libdb5.3:ppc64el (5.3.28+dfsg2-2) ... Selecting previously unselected package libsasl2-modules-db:ppc64el. Preparing to unpack .../107-libsasl2-modules-db_2.1.28+dfsg1-3_ppc64el.deb ... Unpacking libsasl2-modules-db:ppc64el (2.1.28+dfsg1-3) ... Selecting previously unselected package libsasl2-2:ppc64el. Preparing to unpack .../108-libsasl2-2_2.1.28+dfsg1-3_ppc64el.deb ... Unpacking libsasl2-2:ppc64el (2.1.28+dfsg1-3) ... Selecting previously unselected package libldap-2.5-0:ppc64el. Preparing to unpack .../109-libldap-2.5-0_2.5.13+dfsg-5_ppc64el.deb ... Unpacking libldap-2.5-0:ppc64el (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:ppc64el. Preparing to unpack .../110-libnghttp2-14_1.56.0-1_ppc64el.deb ... Unpacking libnghttp2-14:ppc64el (1.56.0-1) ... Selecting previously unselected package libpsl5:ppc64el. 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Unpacking libcurl4-gnutls-dev:ppc64el (8.3.0-1) ... Selecting previously unselected package libdeflate0:ppc64el. Preparing to unpack .../117-libdeflate0_1.18-1_ppc64el.deb ... Unpacking libdeflate0:ppc64el (1.18-1) ... Selecting previously unselected package libdeflate-dev:ppc64el. Preparing to unpack .../118-libdeflate-dev_1.18-1_ppc64el.deb ... Unpacking libdeflate-dev:ppc64el (1.18-1) ... Selecting previously unselected package libgomp1:ppc64el. Preparing to unpack .../119-libgomp1_13.2.0-4_ppc64el.deb ... Unpacking libgomp1:ppc64el (13.2.0-4) ... Selecting previously unselected package libitm1:ppc64el. Preparing to unpack .../120-libitm1_13.2.0-4_ppc64el.deb ... Unpacking libitm1:ppc64el (13.2.0-4) ... Selecting previously unselected package liblsan0:ppc64el. Preparing to unpack .../121-liblsan0_13.2.0-4_ppc64el.deb ... Unpacking liblsan0:ppc64el (13.2.0-4) ... Selecting previously unselected package libtsan0:ppc64el. Preparing to unpack .../122-libtsan0_11.4.0-4_ppc64el.deb ... 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Setting up bsdextrautils (2.39.2-1) ... Setting up libmagic-mgc (1:5.45-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libc6-ppc64el-cross (2.37-3cross1) ... Setting up libdebhelper-perl (13.11.6) ... Setting up libmagic1:amd64 (1:5.45-2) ... Setting up linux-libc-dev:ppc64el (6.5.3-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-13+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2) ... Setting up gcc-13-powerpc64le-linux-gnu-base:amd64 (13.2.0-2cross1) ... Setting up libyaml-perl (1.30-2) ... Setting up libsparsehash-dev (2.0.3-2) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up gcc-13-base:ppc64el (13.2.0-4) ... Setting up gcc-13-cross-base (13.2.0-2cross1) ... Setting up autopoint (0.21-13) ... Setting up autoconf (2.71-3) ... Setting up libitm1-ppc64el-cross (13.2.0-2cross1) ... Setting up libatomic1-ppc64el-cross (13.2.0-2cross1) ... Setting up sensible-utils (0.0.20) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up linux-libc-dev-ppc64el-cross (6.3.7-1cross1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libgcc-s1-ppc64el-cross (13.2.0-2cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.41-5) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up cpp-13-powerpc64le-linux-gnu (13.2.0-2cross1) ... Setting up libelf1:amd64 (0.189-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3) ... Setting up liblocale-gettext-perl (1.07-6) ... Setting up cpp-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-13+b1) ... Setting up libc6-dev-ppc64el-cross (2.37-3cross1) ... Setting up libtool (2.4.7-7) ... Setting up libquadmath0-ppc64el-cross (13.2.0-2cross1) ... Setting up libasan8-ppc64el-cross (13.2.0-2cross1) ... Setting up libgomp1-ppc64el-cross (13.2.0-2cross1) ... Setting up liblsan0-ppc64el-cross (13.2.0-2cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libtsan2-ppc64el-cross (13.2.0-2cross1) ... Setting up dh-autoreconf (20) ... Setting up ucf (3.0043+nmu1) ... Setting up libstdc++6-ppc64el-cross (13.2.0-2cross1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-2) ... Setting up libubsan1-ppc64el-cross (13.2.0-2cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-ppc64el-cross (13.2.0-2cross1) ... Setting up libstdc++-13-dev-ppc64el-cross (13.2.0-2cross1) ... Setting up debhelper (13.11.6) ... Setting up gcc-13-powerpc64le-linux-gnu (13.2.0-2cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-13-powerpc64le-linux-gnu (13.2.0-2cross1) ... Setting up gcc-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up g++-powerpc64le-linux-gnu (4:13.2.0-1) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-ppc64el (12.10) ... Setting up libgcc-s1:ppc64el (13.2.0-4) ... Setting up libc6:ppc64el (2.37-10) ... Setting up libffi8:ppc64el (3.4.4-1) ... Setting up libtasn1-6:ppc64el (4.19.0-3) ... Setting up libbz2-1.0:ppc64el (1.0.8-5+b1) ... Setting up libdb5.3:ppc64el (5.3.28+dfsg2-2) ... Setting up libstdc++6:ppc64el (13.2.0-4) ... Setting up liblsan0:ppc64el (13.2.0-4) ... Setting up libitm1:ppc64el (13.2.0-4) ... Setting up libtinfo6:ppc64el (6.4+20230625-2) ... Setting up libtsan0:ppc64el (11.4.0-4) ... Setting up libhtscodecs2:ppc64el (1.5.1-1) ... Setting up libzstd1:ppc64el (1.5.5+dfsg2-2) ... Setting up libkeyutils1:ppc64el (1.6.3-2) ... Setting up liblzma5:ppc64el (5.4.4-0.1) ... Setting up libbrotli1:ppc64el (1.0.9-2+b6) ... Setting up libssl3:ppc64el (3.0.11-1) ... Setting up libnghttp2-14:ppc64el (1.56.0-1) ... Setting up libdeflate0:ppc64el (1.18-1) ... Setting up zlib1g:ppc64el (1:1.2.13.dfsg-3) ... Setting up libcrypt1:ppc64el (1:4.4.36-2) ... Setting up libcom-err2:ppc64el (1.47.0-2+b1) ... Setting up libgomp1:ppc64el (13.2.0-4) ... Setting up libasan6:ppc64el (11.4.0-4) ... Setting up libkrb5support0:ppc64el (1.20.1-4) ... Setting up libsasl2-modules-db:ppc64el (2.1.28+dfsg1-3) ... Setting up libnettle8:ppc64el (3.9.1-2) ... Setting up libgmp10:ppc64el (2:6.3.0+dfsg-2) ... Setting up libncurses6:ppc64el (6.4+20230625-2) ... Setting up libquadmath0:ppc64el (13.2.0-4) ... Setting up libp11-kit0:ppc64el (0.25.0-4) ... Setting up libunistring5:ppc64el (1.1-2) ... Setting up libatomic1:ppc64el (13.2.0-4) ... Setting up libk5crypto3:ppc64el (1.20.1-4) ... Setting up libsasl2-2:ppc64el (2.1.28+dfsg1-3) ... Setting up liblzma-dev:ppc64el (5.4.4-0.1) ... Setting up libubsan1:ppc64el (13.2.0-4) ... Setting up libgcc-11-dev:ppc64el (11.4.0-4) ... Setting up libcrypt-dev:ppc64el (1:4.4.36-2) ... Setting up libssh2-1:ppc64el (1.11.0-2) ... Setting up libkrb5-3:ppc64el (1.20.1-4) ... Setting up libdeflate-dev:ppc64el (1.18-1) ... Setting up libhogweed6:ppc64el (3.9.1-2) ... Setting up libidn2-0:ppc64el (2.3.4-1+b1) ... Setting up libgnutls30:ppc64el (3.8.1-4+b1) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:ppc64el (1.20.1-4) ... Setting up libtirpc3:ppc64el (1.3.3+ds-1) ... Setting up libpsl5:ppc64el (0.21.2-1+b1) ... Setting up libldap-2.5-0:ppc64el (2.5.13+dfsg-5) ... Setting up libtirpc-dev:ppc64el (1.3.3+ds-1) ... Setting up libnsl2:ppc64el (1.3.0-2) ... Setting up libcurl3-gnutls:ppc64el (8.3.0-1) ... Setting up libcurl4-gnutls-dev:ppc64el (8.3.0-1) ... Setting up libnsl-dev:ppc64el (1.3.0-2) ... Setting up libc6-dev:ppc64el (2.37-10) ... Setting up libhts3:ppc64el (1.17+ds-1) ... Setting up samtools:ppc64el (1.17-1) ... Setting up libstdc++-11-dev:ppc64el (11.4.0-4) ... Setting up zlib1g-dev:ppc64el (1:1.2.13.dfsg-3) ... Setting up libhts-dev:ppc64el (1.17+ds-1) ... Setting up libbam-dev:ppc64el (0.1.19+dfsg-6) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.37-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-9-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.27-1 (2023-05-08) amd64 (x86_64) Toolchain package versions: binutils_2.41-5 dpkg-dev_1.22.0 g++-11_11.4.0-4 g++-13_13.2.0-4 gcc-11_11.4.0-4 gcc-13_13.2.0-4 libc6-dev_2.37-10 libstdc++-11-dev_11.4.0-4 libstdc++-13-dev_13.2.0-4 libstdc++-13-dev-ppc64el-cross_13.2.0-2cross1 libstdc++6_13.2.0-4 libstdc++6-ppc64el-cross_13.2.0-2cross1 linux-libc-dev_6.5.3-1 Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.1 bash_5.2.15-2+b5 binutils_2.41-5 binutils-common_2.41-5 binutils-powerpc64le-linux-gnu_2.41-5 binutils-x86-64-linux-gnu_2.41-5 bsdextrautils_2.39.2-1 bsdutils_1:2.39.2-1 build-essential_12.10 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:13.2.0-1 cpp-11_11.4.0-4 cpp-13_13.2.0-4 cpp-13-powerpc64le-linux-gnu_13.2.0-2cross1 cpp-powerpc64le-linux-gnu_4:13.2.0-1 cross-config_2.6.20 crossbuild-essential-ppc64el_12.10 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.6 debian-archive-keyring_2023.4 debianutils_5.13 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.22.0 dpkg-cross_2.6.20 dpkg-dev_1.22.0 dwz_0.15-1 e2fsprogs_1.47.0-2+b1 fakeroot_1.32.1-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-1 g++-11_11.4.0-4 g++-13_13.2.0-4 g++-13-powerpc64le-linux-gnu_13.2.0-2cross1 g++-powerpc64le-linux-gnu_4:13.2.0-1 gcc_4:13.2.0-1 gcc-11_11.4.0-4 gcc-11-base_11.4.0-4 gcc-12-base_12.3.0-9 gcc-13_13.2.0-4 gcc-13-base_13.2.0-4 gcc-13-cross-base_13.2.0-2cross1 gcc-13-powerpc64le-linux-gnu_13.2.0-2cross1 gcc-13-powerpc64le-linux-gnu-base_13.2.0-2cross1 gcc-9-base_9.5.0-4 gcc-powerpc64le-linux-gnu_4:13.2.0-1 gettext_0.21-13+b1 gettext-base_0.21-13+b1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-2 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libasan6_11.4.0-4 libasan8_13.2.0-4 libasan8-ppc64el-cross_13.2.0-2cross1 libatomic1_13.2.0-4 libatomic1-ppc64el-cross_13.2.0-2cross1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbam-dev_0.1.19+dfsg-6 libbinutils_2.41-5 libblkid1_2.39.2-1 libbrotli1_1.0.9-2+b6 libbz2-1.0_1.0.8-5+b1 libc-bin_2.37-10 libc-dev-bin_2.37-10 libc6_2.37-10 libc6-dev_2.37-10 libc6-dev-ppc64el-cross_2.37-3cross1 libc6-ppc64el-cross_2.37-3cross1 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-4 libcc1-0_13.2.0-4 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.41-5 libctf0_2.41-5 libcurl3-gnutls_8.3.0-1 libcurl4-gnutls-dev_8.3.0-1 libdb5.3_5.3.28+dfsg2-2 libdebconfclient0_0.270 libdebhelper-perl_13.11.6 libdebian-dpkgcross-perl_2.6.20 libdeflate-dev_1.18-1 libdeflate0_1.18-1 libdpkg-perl_1.22.0 libelf1_0.189-4 libext2fs2_1.47.0-2+b1 libfakeroot_1.32.1-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.4.0-4 libgcc-13-dev_13.2.0-4 libgcc-13-dev-ppc64el-cross_13.2.0-2cross1 libgcc-s1_13.2.0-4 libgcc-s1-ppc64el-cross_13.2.0-2cross1 libgcrypt20_1.10.2-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.1-4+b1 libgomp1_13.2.0-4 libgomp1-ppc64el-cross_13.2.0-2cross1 libgpg-error0_1.47-2 libgprofng0_2.41-5 libgssapi-krb5-2_1.20.1-4 libhogweed6_3.9.1-2 libhts-dev_1.17+ds-1 libhts3_1.17+ds-1 libhtscodecs2_1.5.1-1 libhwasan0_13.2.0-4 libicu72_72.1-3 libidn2-0_2.3.4-1+b1 libio-string-perl_1.08-4 libisl23_0.26-3 libitm1_13.2.0-4 libitm1-ppc64el-cross_13.2.0-2cross1 libjansson4_2.14-2 libk5crypto3_1.20.1-4 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-4 libkrb5support0_1.20.1-4 libldap-2.5-0_2.5.13+dfsg-5 liblocale-gettext-perl_1.07-6 liblsan0_13.2.0-4 liblsan0-ppc64el-cross_13.2.0-2cross1 liblz4-1_1.9.4-1 liblzma-dev_5.4.4-0.1 liblzma5_5.4.4-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.2-1 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libncurses6_6.4+20230625-2 libnettle8_3.9.1-2 libnghttp2-14_1.56.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.0-4 libpam-modules_1.5.2-7 libpam-modules-bin_1.5.2-7 libpam-runtime_1.5.2-7 libpam0g_1.5.2-7 libpcre2-8-0_10.42-4 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-9 libpipeline1_1.5.7-1 libpsl5_0.21.2-1+b1 libquadmath0_13.2.0-4 libquadmath0-ppc64el-cross_13.2.0-2cross1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg1-3 libsasl2-modules-db_2.1.28+dfsg1-3 libseccomp2_2.5.4-1+b3 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-1 libsframe1_2.41-5 libsmartcols1_2.39.2-1 libsparsehash-dev_2.0.3-2 libss2_1.47.0-2+b1 libssh2-1_1.11.0-2 libssl3_3.0.11-1 libstdc++-11-dev_11.4.0-4 libstdc++-13-dev_13.2.0-4 libstdc++-13-dev-ppc64el-cross_13.2.0-2cross1 libstdc++6_13.2.0-4 libstdc++6-ppc64el-cross_13.2.0-2cross1 libsub-override-perl_0.09-4 libsystemd0_254.4-1 libtasn1-6_4.19.0-3 libtext-glob-perl_0.11-3 libtinfo6_6.4+20230625-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libtsan0_11.4.0-4 libtsan2_13.2.0-4 libtsan2-ppc64el-cross_13.2.0-2cross1 libubsan1_13.2.0-4 libubsan1-ppc64el-cross_13.2.0-2cross1 libuchardet0_0.0.7-1 libudev1_254.4-1 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.2-1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3 libxxhash0_0.8.2-2 libyaml-perl_1.30-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.3-1 linux-libc-dev-ppc64el-cross_6.3.7-1cross1 login_1:4.13+dfsg1-1+b1 logsave_1.47.0-2+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.11.2-3 mawk_1.3.4.20230808-1 mount_2.39.2-1 ncurses-base_6.4+20230625-2 ncurses-bin_6.4+20230625-2 passwd_1:4.13+dfsg1-1+b1 patch_2.7.6-7 perl_5.36.0-9 perl-base_5.36.0-9 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-9 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 samtools_1.17-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sysvinit-utils_3.08-1 tar_1.34+dfsg-1.2 tzdata_2023c-10 ucf_3.0043+nmu1 usrmerge_37 util-linux_2.39.2-1 util-linux-extra_2.39.2-1 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: stacks Binary: stacks Architecture: any Version: 2.65+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Tim Booth , Andreas Tille Homepage: https://creskolab.uoregon.edu/stacks/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/stacks Vcs-Git: https://salsa.debian.org/med-team/stacks.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev Package-List: stacks deb science optional arch=any Checksums-Sha1: feb0f3a49eb44099c31643ab6f1a4bfc53e3f36f 335124 stacks_2.65+dfsg.orig.tar.xz 7d2849c1cb5f1c5d136b2f49398083768b010efc 12096 stacks_2.65+dfsg-2.debian.tar.xz Checksums-Sha256: 7b3feb2901a64c8681f66f3c9404192d2004981e2e6458fa4f61bc18f904aeea 335124 stacks_2.65+dfsg.orig.tar.xz e80b1f503453a0ef9edec91ca63c52e7f1383624a7d522f1362778803f4209ac 12096 stacks_2.65+dfsg-2.debian.tar.xz Files: 75107a175f153c12a5c358a37ad53839 335124 stacks_2.65+dfsg.orig.tar.xz 8e771675d2830dbd4d0e269af3f7451a 12096 stacks_2.65+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmULBlcRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGljBAAiCrbtviphxO0oXkAHHHyYVSuA8PpvZcb RGIUIY/9KyskFFt2oGD454+/06harmEtirkpFZ4i7Z1p1sf1+qR86fLd3mPZO/rg RHHr2h2CEHvndDdpUNbznKjxsD6GlsbTV12jB7fXIw6jSSxK2HkccLzz0Bny/mJ2 G/Kc4t/edUqQgbJgMqxK+ba7MATKv9l27gxdaL1VHwGOAd/RkSnXdZdyh2mwd6MW 2BCahdtrVl4W/QfhUsn28PRt0hac5XGzbF6XTcXQObTbNzPAQ+MZEatVzvhTbi2x n44SpVbdaLMP09cpeDTQXnjiW3ByEgPKOQSWXtyFPru70OftLzzQYiTkJrhSph2I azGrE/0G69BFNVPoZkKd8WXfBJjtNZ/HMYEwjKlEKlrLxnqDpefgfApKkXpKxADr kHJjtz8JNv576MovMeBmtwuWfZX/xspJ0/6RtfHsDrdP44MiijTiwRERo3pu4Rov SRgWZWqMwZ7tS53AiNocqf9q1yod38KPWlBaepph266xWgza3s0BxnTp2BnZuBFL LqkpVdQYWSInPryJhEC34vs9mWIqdTgEoFiw+AedOpHm/o4eD4ZL/iHMq0aya87R 87WD2iPGyHxOI+WsjyChNuJawjc5Qmnc+hWBy/ueMFAvog8jLLMXf4nLXyvXERLe /r5rAkWEvYc= =aWI8 -----END PGP SIGNATURE----- gpgv: Signature made Wed Sep 20 14:48:55 2023 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./stacks_2.65+dfsg-2.dsc: no acceptable signature found dpkg-source: info: extracting stacks in /<> dpkg-source: info: unpacking stacks_2.65+dfsg.orig.tar.xz dpkg-source: info: unpacking stacks_2.65+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying RisR.patch dpkg-source: info: applying script-exe-paths dpkg-source: info: applying use_debian_packaged_htslib.patch dpkg-source: info: applying fix_spelling_errors.patch dpkg-source: info: applying change_program_exit_to_success.patch dpkg-source: info: applying offer_help_option_for_stacks_gdb.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-1211ccda-dda3-4046-879c-a74b74207d91 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package stacks dpkg-buildpackage: info: source version 2.65+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Lance Lin dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f ./constants.php make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:28: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:28: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:28: the top level configure.ac:20: installing 'config/ar-lib' configure.ac:15: installing 'config/compile' configure.ac:42: installing 'config/config.guess' configure.ac:42: installing 'config/config.sub' configure.ac:7: installing 'config/install-sh' configure.ac:7: installing 'config/missing' Makefile.am: installing 'config/depcomp' parallel-tests: installing 'config/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-sparsehash --enable-bam \ --with-bam-include-path=/usr/include/samtools \ --with-bam-lib-path=/usr/lib ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=powerpc64le-linux-gnu --enable-sparsehash --enable-bam --with-bam-include-path=/usr/include/samtools --with-bam-lib-path=/usr/lib configure: loading site script /etc/dpkg-cross/cross-config.ppc64el checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for powerpc64le-linux-gnu-strip... powerpc64le-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for powerpc64le-linux-gnu-g++... powerpc64le-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether powerpc64le-linux-gnu-g++ accepts -g... yes checking for powerpc64le-linux-gnu-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of powerpc64le-linux-gnu-g++... none checking for powerpc64le-linux-gnu-gcc... powerpc64le-linux-gnu-gcc checking whether the compiler supports GNU C... yes checking whether powerpc64le-linux-gnu-gcc accepts -g... yes checking for powerpc64le-linux-gnu-gcc option to enable C11 features... none needed checking whether powerpc64le-linux-gnu-gcc understands -c and -o together... yes checking dependency style of powerpc64le-linux-gnu-gcc... none checking whether powerpc64le-linux-gnu-g++ supports C++11 features by default... yes checking for powerpc64le-linux-gnu-ranlib... powerpc64le-linux-gnu-ranlib checking for powerpc64le-linux-gnu-ar... powerpc64le-linux-gnu-ar checking the archiver (powerpc64le-linux-gnu-ar) interface... ar checking for omp_set_num_threads in -lgomp... yes checking for gzread in -lz... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for float.h... yes checking for limits.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for powerpc64le-linux-gnu-gcc option to support OpenMP... -fopenmp checking for _Bool... yes checking for stdbool.h that conforms to C99... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether closedir returns void... no checking build system type... x86_64-pc-linux-gnu checking host system type... powerpc64le-unknown-linux-gnu checking for GNU libc compatible malloc... (cached) yes checking for GNU libc compatible realloc... (cached) yes checking for floor... no checking for memset... yes checking for pow... no checking for sqrt... no checking for clock_gettime... yes checking for functional regular expressions... configure: WARNING: Requires g++ 4.9.0 or greater. no checking for gawk... (cached) mawk checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ustacks.o src/ustacks.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/aln_utils.o src/aln_utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/BamI.o src/BamI.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/catalog_utils.o src/catalog_utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/cmb.o src/cmb.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/constants.o src/constants.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/DNANSeq.o src/DNANSeq.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/DNASeq4.o src/DNASeq4.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/DNASeq.o src/DNASeq.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gzFasta.o src/gzFasta.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/input.o src/input.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/kmers.o src/kmers.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/locus.o src/locus.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/log_utils.o src/log_utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/MetaPopInfo.o src/MetaPopInfo.cc src/MetaPopInfo.cc: In member function ‘void MetaPopInfo::fill_pop_indexes(std::map >&) const’: src/MetaPopInfo.cc:427:30: warning: narrowing conversion of ‘i’ from ‘std::size_t’ {aka ‘long unsigned int’} to ‘int’ [-Wnarrowing] 427 | pop_indexes.insert( {i, {pops_[i].first_sample, pops_[i].last_sample}} ); | ^ powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/models.o src/models.cc In file included from /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_algo.h:61, from /usr/powerpc64le-linux-gnu/include/c++/13/algorithm:61, from src/constants.h:53, from src/models.h:24, from src/models.cc:30: /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = pair*; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/powerpc64le-linux-gnu/include/c++/13/bits/stl_heap.h:224:5: note: parameter passing for argument of type ‘std::pair’ when C++17 is enabled changed to match C++14 in GCC 10.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mstack.o src/mstack.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mst.o src/mst.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/nucleotides.o src/nucleotides.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/renz.o src/renz.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Seq.o src/Seq.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/sql_utilities.o src/sql_utilities.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/stacks.o src/stacks.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/utils.o src/utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Vcf.o src/Vcf.cc rm -f libcore.a powerpc64le-linux-gnu-ar cru libcore.a src/aln_utils.o src/BamI.o src/catalog_utils.o src/cmb.o src/constants.o src/DNANSeq.o src/DNASeq4.o src/DNASeq.o src/gzFasta.o src/input.o src/kmers.o src/locus.o src/log_utils.o src/MetaPopInfo.o src/models.o src/mstack.o src/mst.o src/nucleotides.o src/renz.o src/Seq.o src/sql_utilities.o src/stacks.o src/utils.o src/Vcf.o powerpc64le-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-ranlib libcore.a powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o ustacks src/ustacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/cstacks.o src/cstacks.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o cstacks src/cstacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/sstacks.o src/sstacks.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o sstacks src/sstacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/process_radtags.o src/process_radtags.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/clean.o src/clean.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/file_io.o src/file_io.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/write.o src/write.cc rm -f libclean.a powerpc64le-linux-gnu-ar cru libclean.a src/clean.o src/file_io.o src/write.o powerpc64le-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-ranlib libclean.a powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o process_radtags src/process_radtags.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/process_shortreads.o src/process_shortreads.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o process_shortreads src/process_shortreads.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/kmer_filter.o src/kmer_filter.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o kmer_filter src/kmer_filter.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/clone_filter.o src/clone_filter.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o clone_filter src/clone_filter.o -lhts libcore.a libclean.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/populations.o src/populations.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/bootstrap.o src/bootstrap.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/export_formats.o src/export_formats.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mapping_utils.o src/mapping_utils.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/genotype_dictionaries.o src/genotype_dictionaries.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/PopSum.o src/PopSum.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Hwp.o src/Hwp.cc rm -f libpop.a powerpc64le-linux-gnu-ar cru libpop.a src/bootstrap.o src/export_formats.o src/mapping_utils.o src/genotype_dictionaries.o src/PopSum.o src/Hwp.o powerpc64le-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') powerpc64le-linux-gnu-ranlib libpop.a powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o populations src/populations.o -lhts libcore.a libpop.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/phasedstacks.o src/phasedstacks.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o phasedstacks src/phasedstacks.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/tsv2bam.o src/tsv2bam.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o tsv2bam src/tsv2bam.o -lhts libcore.a -lz -lgomp powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gstacks.o src/gstacks.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/debruijn.o src/debruijn.cc powerpc64le-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o src/SuffixTree.o src/SuffixTree.cc powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -Wl,-z,relro -Wl,-z,now -o gstacks src/gstacks.o src/debruijn.o src/SuffixTree.o -lhts libcore.a -lz -lgomp make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install --no-parallel make -j1 install DESTDIR=/<>/stacks-2.65\+dfsg/debian/stacks AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' /usr/bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c ustacks cstacks sstacks process_radtags process_shortreads kmer_filter clone_filter populations phasedstacks tsv2bam gstacks '/<>/debian/stacks/usr/bin' /usr/bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c scripts/denovo_map.pl scripts/ref_map.pl scripts/stacks-integrate-alignments scripts/stacks-dist-extract scripts/stacks-gdb scripts/stacks-samtools-tview scripts/stacks-count-reads-per-sample-per-locus scripts/stacks-hist2d-loci-samples-coverage '/<>/debian/stacks/usr/bin' make install-data-hook make[5]: Entering directory '/<>' sed -e 's,_VERSION_,2.65,' -e 's,_BINDIR_,/usr/libexec/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/denovo_map.pl > /<>/debian/stacks/usr/bin/denovo_map.pl.subst mv /<>/debian/stacks/usr/bin/denovo_map.pl.subst /<>/debian/stacks/usr/bin/denovo_map.pl chmod +x /<>/debian/stacks/usr/bin/denovo_map.pl sed -e 's,_VERSION_,2.65,' -e 's,_BINDIR_,/usr/libexec/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/ref_map.pl > /<>/debian/stacks/usr/bin/ref_map.pl.subst mv /<>/debian/stacks/usr/bin/ref_map.pl.subst /<>/debian/stacks/usr/bin/ref_map.pl chmod +x /<>/debian/stacks/usr/bin/ref_map.pl sed -i.bkp -e 's,_VERSION_,2.65,' /<>/debian/stacks/usr/bin/stacks-integrate-alignments sed -i.bkp -e 's,_VERSION_,2.65,' /<>/debian/stacks/usr/bin/stacks-samtools-tview rm -f /<>/debian/stacks/usr/bin/stacks-integrate-alignments.bkp rm -f /<>/debian/stacks/usr/bin/stacks-samtools-tview.bkp chmod +x /<>/debian/stacks/usr/bin/stacks-integrate-alignments chmod +x /<>/debian/stacks/usr/bin/stacks-dist-extract chmod +x /<>/debian/stacks/usr/bin/stacks-gdb make[5]: Leaving directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' mkdir -p debian/stacks/usr/libexec/stacks mv debian/stacks/usr/bin debian/stacks/usr/libexec/stacks cd debian/stacks/usr/libexec/stacks/bin && \ for f in *.pl ; do \ ln -s "$f" "`basename $f .pl`" ; \ sed -i '1s?^#!/usr/bin/env.*perl?#!/usr/bin/perl?' $f ; \ done dh_install make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a debian/rules override_dh_link make[1]: Entering directory '/<>' dh_link mkdir -p debian/stacks/usr/libexec/debian-med/bin cd debian/stacks/usr/libexec/debian-med/bin && \ for f in `ls /<>/debian/stacks/usr/libexec/stacks/bin` ; do \ ln -s ../../stacks/bin/$f ; \ done make[1]: Leaving directory '/<>' dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'stacks' in '../stacks_2.65+dfsg-2_ppc64el.deb'. dpkg-deb: building package 'stacks-dbgsym' in '../stacks-dbgsym_2.65+dfsg-2_ppc64el.deb'. dpkg-genbuildinfo --build=any -O../stacks_2.65+dfsg-2_ppc64el.buildinfo dpkg-genchanges --build=any -O../stacks_2.65+dfsg-2_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-09-21T19:22:03Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ stacks_2.65+dfsg-2_ppc64el.changes: ----------------------------------- Format: 1.8 Date: Fri, 01 Sep 2023 20:40:42 +0700 Source: stacks Binary: stacks stacks-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 2.65+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Lance Lin Description: stacks - pipeline for building loci from short-read DNA sequences Changes: stacks (2.65+dfsg-2) unstable; urgency=medium . * Team upload. * d/bin/stacks: Fix path to be libexec for executables * d/control: Add python3 and bsdextrautils to Depends Remove python3 from Recommends Add gdb to Suggests * d/tests: Add superficial autopkgtest (needs test data) * d/patches/change_program_exit_to_success.patch: Fix exit codes to be successful and output to stdout * d/patches/offer_help_option_for_stacks_gdb.patch: Gives usage information for options -h, --help, and --version Checksums-Sha1: 7125d89f0639c88aecebd8eff279df7a677491ab 26755668 stacks-dbgsym_2.65+dfsg-2_ppc64el.deb 558b2ed77ed340b6b20ff7a2422efd2e472d6bea 6090 stacks_2.65+dfsg-2_ppc64el.buildinfo 4f0e77a0272471ef34240f5918c7778ecd1dc8f2 1136412 stacks_2.65+dfsg-2_ppc64el.deb Checksums-Sha256: 97638a1ad1a19ac23edfcdda44d477b47feb7cf8379b1ffcbe12c2e69ed4cba9 26755668 stacks-dbgsym_2.65+dfsg-2_ppc64el.deb c3f1842f0fd4b49a4f2d4e86a363a27b49e9ebfbf95860f6a9f89f4abf3410fe 6090 stacks_2.65+dfsg-2_ppc64el.buildinfo b0bdf14f0f32c7fae11037fb2ad70069f6226513c0eafcbc58a6e91c41886a38 1136412 stacks_2.65+dfsg-2_ppc64el.deb Files: 0dea4c1ad62448ea76d5c0b166c65e68 26755668 debug optional stacks-dbgsym_2.65+dfsg-2_ppc64el.deb 251af88d48945198e11e697caf6a274c 6090 science optional stacks_2.65+dfsg-2_ppc64el.buildinfo 17d379906b29047315c3cb97b3c9d335 1136412 science optional stacks_2.65+dfsg-2_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: stacks Binary: stacks stacks-dbgsym Architecture: ppc64el Version: 2.65+dfsg-2 Checksums-Md5: 0dea4c1ad62448ea76d5c0b166c65e68 26755668 stacks-dbgsym_2.65+dfsg-2_ppc64el.deb 17d379906b29047315c3cb97b3c9d335 1136412 stacks_2.65+dfsg-2_ppc64el.deb Checksums-Sha1: 7125d89f0639c88aecebd8eff279df7a677491ab 26755668 stacks-dbgsym_2.65+dfsg-2_ppc64el.deb 4f0e77a0272471ef34240f5918c7778ecd1dc8f2 1136412 stacks_2.65+dfsg-2_ppc64el.deb Checksums-Sha256: 97638a1ad1a19ac23edfcdda44d477b47feb7cf8379b1ffcbe12c2e69ed4cba9 26755668 stacks-dbgsym_2.65+dfsg-2_ppc64el.deb b0bdf14f0f32c7fae11037fb2ad70069f6226513c0eafcbc58a6e91c41886a38 1136412 stacks_2.65+dfsg-2_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 21 Sep 2023 19:22:03 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.1), bash (= 5.2.15-2+b5), binutils (= 2.41-5), binutils-common (= 2.41-5), binutils-x86-64-linux-gnu (= 2.41-5), bsdextrautils (= 2.39.2-1), bsdutils (= 1:2.39.2-1), build-essential (= 12.10), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:13.2.0-1), cpp-11 (= 11.4.0-4), cpp-13 (= 13.2.0-4), dash (= 0.5.12-6), debconf (= 1.5.82), debhelper (= 13.11.6), debianutils (= 5.13), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.22.0), dpkg-dev (= 1.22.0), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), g++ (= 4:13.2.0-1), g++-13 (= 13.2.0-4), gcc (= 4:13.2.0-1), gcc-11 (= 11.4.0-4), gcc-11-base (= 11.4.0-4), gcc-13 (= 13.2.0-4), gcc-13-base (= 13.2.0-4), gettext (= 0.21-13+b1), gettext-base (= 0.21-13+b1), grep (= 3.11-3), groff-base (= 1.23.0-2), gzip (= 1.12-1), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.4.0-4), libasan8 (= 13.2.0-4), libatomic1 (= 13.2.0-4), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.1-1), libaudit1 (= 1:3.1.1-1), libbam-dev (= 0.1.19+dfsg-6), libbinutils (= 2.41-5), libblkid1 (= 2.39.2-1), libbrotli1 (= 1.0.9-2+b6), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.37-10), libc-dev-bin (= 2.37-10), libc6 (= 2.37-10), libc6-dev (= 2.37-10), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-4), libcc1-0 (= 13.2.0-4), libcom-err2 (= 1.47.0-2+b1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41-5), libctf0 (= 2.41-5), libcurl3-gnutls (= 8.3.0-1), libcurl4-gnutls-dev (= 8.3.0-1), libdb5.3 (= 5.3.28+dfsg2-2), libdebconfclient0 (= 0.270), libdebhelper-perl (= 13.11.6), libdeflate-dev (= 1.18-1), libdeflate0 (= 1.18-1), libdpkg-perl (= 1.22.0), libelf1 (= 0.189-4), libffi8 (= 3.4.4-1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.4.0-4), libgcc-13-dev (= 13.2.0-4), libgcc-s1 (= 13.2.0-4), libgcrypt20 (= 1.10.2-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.3.0+dfsg-2), libgnutls30 (= 3.8.1-4+b1), libgomp1 (= 13.2.0-4), libgpg-error0 (= 1.47-2), libgprofng0 (= 2.41-5), libgssapi-krb5-2 (= 1.20.1-4), libhogweed6 (= 3.9.1-2), libhts-dev (= 1.17+ds-1), libhts3 (= 1.17+ds-1), libhtscodecs2 (= 1.5.1-1), libhwasan0 (= 13.2.0-4), libicu72 (= 72.1-3), libidn2-0 (= 2.3.4-1+b1), libisl23 (= 0.26-3), libitm1 (= 13.2.0-4), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-4), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-4), libkrb5support0 (= 1.20.1-4), libldap-2.5-0 (= 2.5.13+dfsg-5), liblsan0 (= 13.2.0-4), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.4.4-0.1), liblzma5 (= 5.4.4-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmount1 (= 2.39.2-1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libncurses6 (= 6.4+20230625-2), libnettle8 (= 3.9.1-2), libnghttp2-14 (= 1.56.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libp11-kit0 (= 0.25.0-4), libpam-modules (= 1.5.2-7), libpam-modules-bin (= 1.5.2-7), libpam-runtime (= 1.5.2-7), libpam0g (= 1.5.2-7), libpcre2-8-0 (= 10.42-4), libperl5.36 (= 5.36.0-9), libpipeline1 (= 1.5.7-1), libpsl5 (= 0.21.2-1+b1), libquadmath0 (= 13.2.0-4), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.28+dfsg1-3), libsasl2-modules-db (= 2.1.28+dfsg1-3), libseccomp2 (= 2.5.4-1+b3), libselinux1 (= 3.5-1), libsframe1 (= 2.41-5), libsmartcols1 (= 2.39.2-1), libsparsehash-dev (= 2.0.3-2), libssh2-1 (= 1.11.0-2), libssl3 (= 3.0.11-1), libstdc++-13-dev (= 13.2.0-4), libstdc++6 (= 13.2.0-4), libsub-override-perl (= 0.09-4), libsystemd0 (= 254.4-1), libtasn1-6 (= 4.19.0-3), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20230625-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-7), libtsan0 (= 11.4.0-4), libtsan2 (= 13.2.0-4), libubsan1 (= 13.2.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 254.4-1), libunistring5 (= 1.1-2), libuuid1 (= 2.39.2-1), libxml2 (= 2.9.14+dfsg-1.3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.5.3-1), login (= 1:4.13+dfsg1-1+b1), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.11.2-3), mawk (= 1.3.4.20230808-1), ncurses-base (= 6.4+20230625-2), ncurses-bin (= 6.4+20230625-2), patch (= 2.7.6-7), perl (= 5.36.0-9), perl-base (= 5.36.0-9), perl-modules-5.36 (= 5.36.0-9), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), samtools (= 1.17-1), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.08-1), tar (= 1.34+dfsg-1.2), usrmerge (= 37), util-linux (= 2.39.2-1), xz-utils (= 5.4.4-0.1), zlib1g (= 1:1.2.13.dfsg-3), zlib1g-dev (= 1:1.2.13.dfsg-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1693575642" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ stacks-dbgsym_2.65+dfsg-2_ppc64el.deb ------------------------------------- new Debian package, version 2.0. size 26755668 bytes: control archive=1096 bytes. 788 bytes, 12 lines control 1254 bytes, 12 lines md5sums Package: stacks-dbgsym Source: stacks Version: 2.65+dfsg-2 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 27391 Depends: stacks (= 2.65+dfsg-2) Section: debug Priority: optional Description: debug symbols for stacks Build-Ids: 09095c76c110ed5340e9cec46fabf0c9818be751 1533f86022cfdd91085d8847cedbfcc0027039c2 19604486a0dfaaa1eae9466350ab9e1995e2caf9 35423710d993e89a82582d76f01d29d06916b047 6262669af31b1e0b91927a1a738a5ca1330aa892 6d0789bf873b009d230732df30580ddaa9395d54 6e5523995ab428cef36c33c29a023aa09c4a5474 8f63101ae37637c32e307d98e1a6aaa0076833f4 a561e46442126ff72c0c6283c850ad6988def212 bf2cdf8679851b804f487fc2c432c80e83daa682 c3d0c15af2027a27a39d64bdfe71b0a00fd59deb drwxr-xr-x root/root 0 2023-09-01 13:40 ./ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/09/ -rw-r--r-- root/root 1318480 2023-09-01 13:40 ./usr/lib/debug/.build-id/09/095c76c110ed5340e9cec46fabf0c9818be751.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/15/ -rw-r--r-- root/root 2197568 2023-09-01 13:40 ./usr/lib/debug/.build-id/15/33f86022cfdd91085d8847cedbfcc0027039c2.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/19/ -rw-r--r-- root/root 1922400 2023-09-01 13:40 ./usr/lib/debug/.build-id/19/604486a0dfaaa1eae9466350ab9e1995e2caf9.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/35/ -rw-r--r-- root/root 1883768 2023-09-01 13:40 ./usr/lib/debug/.build-id/35/423710d993e89a82582d76f01d29d06916b047.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/62/ -rw-r--r-- root/root 938632 2023-09-01 13:40 ./usr/lib/debug/.build-id/62/62669af31b1e0b91927a1a738a5ca1330aa892.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/6d/ -rw-r--r-- root/root 2059800 2023-09-01 13:40 ./usr/lib/debug/.build-id/6d/0789bf873b009d230732df30580ddaa9395d54.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/6e/ -rw-r--r-- root/root 5255024 2023-09-01 13:40 ./usr/lib/debug/.build-id/6e/5523995ab428cef36c33c29a023aa09c4a5474.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/8f/ -rw-r--r-- root/root 1666000 2023-09-01 13:40 ./usr/lib/debug/.build-id/8f/63101ae37637c32e307d98e1a6aaa0076833f4.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/a5/ -rw-r--r-- root/root 2348536 2023-09-01 13:40 ./usr/lib/debug/.build-id/a5/61e46442126ff72c0c6283c850ad6988def212.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/bf/ -rw-r--r-- root/root 2649256 2023-09-01 13:40 ./usr/lib/debug/.build-id/bf/2cdf8679851b804f487fc2c432c80e83daa682.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.build-id/c3/ -rw-r--r-- root/root 4336400 2023-09-01 13:40 ./usr/lib/debug/.build-id/c3/d0c15af2027a27a39d64bdfe71b0a00fd59deb.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 1444224 2023-09-01 13:40 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/stacks.debug drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/share/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/share/doc/ lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/share/doc/stacks-dbgsym -> stacks stacks_2.65+dfsg-2_ppc64el.deb ------------------------------ new Debian package, version 2.0. size 1136412 bytes: control archive=1608 bytes. 995 bytes, 20 lines control 1786 bytes, 25 lines md5sums Package: stacks Version: 2.65+dfsg-2 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 6935 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.4.4), libgomp1 (>= 6), libhts3 (>= 1.17), libstdc++6 (>= 13.1), zlib1g (>= 1:1.2.6), samtools, libdbi-perl, bsdextrautils, python3 Recommends: libspreadsheet-writeexcel-perl, littler Suggests: gdb Provides: stacks-web Section: science Priority: optional Homepage: https://creskolab.uoregon.edu/stacks/ Description: pipeline for building loci from short-read DNA sequences Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. . Note that this package installs Stacks such that all commands must be run as: $ stacks drwxr-xr-x root/root 0 2023-09-01 13:40 ./ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/bin/ -rwxr-xr-x root/root 775 2023-09-01 13:40 ./usr/bin/stacks drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/libexec/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/ lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/clone_filter -> ../../stacks/bin/clone_filter lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/cstacks -> ../../stacks/bin/cstacks lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/denovo_map -> ../../stacks/bin/denovo_map lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/denovo_map.pl -> ../../stacks/bin/denovo_map.pl lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/gstacks -> ../../stacks/bin/gstacks lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/kmer_filter -> ../../stacks/bin/kmer_filter lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/phasedstacks -> ../../stacks/bin/phasedstacks lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/populations -> ../../stacks/bin/populations lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/process_radtags -> ../../stacks/bin/process_radtags lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/process_shortreads -> ../../stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/ref_map -> ../../stacks/bin/ref_map lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/ref_map.pl -> ../../stacks/bin/ref_map.pl lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/sstacks -> ../../stacks/bin/sstacks lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/stacks-count-reads-per-sample-per-locus -> ../../stacks/bin/stacks-count-reads-per-sample-per-locus lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/stacks-dist-extract -> ../../stacks/bin/stacks-dist-extract lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/stacks-gdb -> ../../stacks/bin/stacks-gdb lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/stacks-hist2d-loci-samples-coverage -> ../../stacks/bin/stacks-hist2d-loci-samples-coverage lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/stacks-integrate-alignments -> ../../stacks/bin/stacks-integrate-alignments lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/stacks-samtools-tview -> ../../stacks/bin/stacks-samtools-tview lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/tsv2bam -> ../../stacks/bin/tsv2bam lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/debian-med/bin/ustacks -> ../../stacks/bin/ustacks drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/libexec/stacks/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/libexec/stacks/bin/ -rwxr-xr-x root/root 463400 2023-09-01 13:40 ./usr/libexec/stacks/bin/clone_filter -rwxr-xr-x root/root 594104 2023-09-01 13:40 ./usr/libexec/stacks/bin/cstacks lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/stacks/bin/denovo_map -> denovo_map.pl -rwxr-xr-x root/root 32838 2023-09-01 13:40 ./usr/libexec/stacks/bin/denovo_map.pl -rwxr-xr-x root/root 986656 2023-09-01 13:40 ./usr/libexec/stacks/bin/gstacks -rwxr-xr-x root/root 332240 2023-09-01 13:40 ./usr/libexec/stacks/bin/kmer_filter -rwxr-xr-x root/root 463064 2023-09-01 13:40 ./usr/libexec/stacks/bin/phasedstacks -rwxr-xr-x root/root 1318152 2023-09-01 13:40 ./usr/libexec/stacks/bin/populations -rwxr-xr-x root/root 597232 2023-09-01 13:40 ./usr/libexec/stacks/bin/process_radtags -rwxr-xr-x root/root 464248 2023-09-01 13:40 ./usr/libexec/stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2023-09-01 13:40 ./usr/libexec/stacks/bin/ref_map -> ref_map.pl -rwxr-xr-x root/root 15364 2023-09-01 13:40 ./usr/libexec/stacks/bin/ref_map.pl -rwxr-xr-x root/root 528368 2023-09-01 13:40 ./usr/libexec/stacks/bin/sstacks -rwxr-xr-x root/root 1040 2023-09-01 13:40 ./usr/libexec/stacks/bin/stacks-count-reads-per-sample-per-locus -rwxr-xr-x root/root 1164 2023-09-01 13:40 ./usr/libexec/stacks/bin/stacks-dist-extract -rwxr-xr-x root/root 1244 2023-09-01 13:40 ./usr/libexec/stacks/bin/stacks-gdb -rwxr-xr-x root/root 1773 2023-09-01 13:40 ./usr/libexec/stacks/bin/stacks-hist2d-loci-samples-coverage -rwxr-xr-x root/root 22272 2023-09-01 13:40 ./usr/libexec/stacks/bin/stacks-integrate-alignments -rwxr-xr-x root/root 3037 2023-09-01 13:40 ./usr/libexec/stacks/bin/stacks-samtools-tview -rwxr-xr-x root/root 593336 2023-09-01 13:40 ./usr/libexec/stacks/bin/tsv2bam -rwxr-xr-x root/root 594904 2023-09-01 13:40 ./usr/libexec/stacks/bin/ustacks drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/share/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/share/doc/ drwxr-xr-x root/root 0 2023-09-01 13:40 ./usr/share/doc/stacks/ -rw-r--r-- root/root 229 2023-09-01 13:40 ./usr/share/doc/stacks/NEWS.Debian.gz -rw-r--r-- root/root 1451 2023-09-01 13:40 ./usr/share/doc/stacks/README.Debian -rw-r--r-- root/root 1295 2023-09-01 13:40 ./usr/share/doc/stacks/changelog.Debian.gz -rw-r--r-- root/root 31229 2023-08-18 16:30 ./usr/share/doc/stacks/changelog.gz -rw-r--r-- root/root 1730 2023-09-01 13:40 ./usr/share/doc/stacks/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1367 B] Get:5 copy:/<>/apt_archive ./ Packages [1450 B] Fetched 3432 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:ppc64el t1utils unzip 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 13.8 MB of archives. After this operation, 51.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.11-1 [1416 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.6-1 [49.9 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.43.1-1 [872 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.21-1 [95.6 kB] Get:29 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:30 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.57-1 [221 kB] Get:31 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:35 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.29-1 [16.5 kB] Get:36 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:37 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.37-1 [131 kB] Get:42 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:43 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:48 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:56 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:61 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:62 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:64 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:65 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.44-2 [81.8 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:72 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:73 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:74 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.083-1 [218 kB] Get:75 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:76 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:77 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.72-1 [187 kB] Get:79 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:80 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:81 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:82 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:83 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-6 [37.8 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:89 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:91 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:92 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:94 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:95 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:96 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:97 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:98 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1 [12.5 kB] Get:100 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:101 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:102 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:104 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1 [43.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1 [99.5 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1 [102 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:109 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.38-1 [60.0 kB] Get:110 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1 [28.8 kB] Get:111 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:112 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:113 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:114 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:117 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:118 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:119 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:121 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-6 [63.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:123 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:124 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:125 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:126 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.8 MB in 0s (81.5 MB/s) Selecting previously unselected package netbase. 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Setting up plzip (1.10-6) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.37-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:amd64 (3.43.1-1) ... 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Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.11-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up readline-common (8.2-1.3) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.21-1) ... Setting up iso-codes (4.15.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.083-1) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.44-2) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.57-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.37-10) ... Processing triggers for man-db (2.11.2-3) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 369652 Build-Time: 248 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 14 Job: stacks_2.65+dfsg-2 Lintian: pass Machine Architecture: amd64 Package: stacks Package-Time: 273 Source-Version: 2.65+dfsg-2 Space: 369652 Status: successful Version: 2.65+dfsg-2 -------------------------------------------------------------------------------- Finished at 2023-09-21T19:22:03Z Build needed 00:04:33, 369652k disk space