sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | stacks 2.68+dfsg-2 (amd64) Wed, 26 Feb 2025 05:17:59 +0000 | +==============================================================================+ Package: stacks Version: 2.68+dfsg-2 Source Version: 2.68+dfsg-2 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.Y5CMApZg_j... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-wgnKAJ/resolver-iYMth2' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [205 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [11.0 MB] Get:3 http://mirror.einval.org/debian unstable/main arm64 Packages [10.0 MB] Get:4 http://mirror.einval.org/debian unstable/main amd64 Packages [10.1 MB] Fetched 31.3 MB in 7s (4348 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'stacks' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/stacks.git Please use: git clone https://salsa.debian.org/med-team/stacks.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 386 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main stacks 2.68+dfsg-2 (dsc) [2050 B] Get:2 http://mirror.einval.org/debian unstable/main stacks 2.68+dfsg-2 (tar) [371 kB] Get:3 http://mirror.einval.org/debian unstable/main stacks 2.68+dfsg-2 (diff) [12.5 kB] Fetched 386 kB in 0s (3976 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/stacks-wgnKAJ/stacks-2.68+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/stacks-wgnKAJ' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), automake, zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 Filtered Build-Depends: debhelper-compat (= 13), automake, zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-main-dummy has unusual owner or group 998:999 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [789 B] Get:5 copy:/<>/apt_archive ./ Packages [832 B] Fetched 2230 B in 0s (82.9 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils comerr-dev:amd64 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14-base:amd64 gcc-14-cross-base gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:amd64 libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbam-dev:amd64 libbrotli-dev:amd64 libbrotli1:amd64 libbz2-1.0:amd64 libbz2-dev:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcom-err2:amd64 libcrypt-dev:amd64 libcrypt1:amd64 libcurl3t64-gnutls:amd64 libcurl4-gnutls-dev:amd64 libdb5.3t64:amd64 libdebhelper-perl libdeflate-dev:amd64 libdeflate0:amd64 libelf1t64 libevent-2.1-7t64:amd64 libfakeroot libffi8:amd64 libfile-stripnondeterminism-perl libgcc-14-dev:amd64 libgcc-14-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgmp-dev:amd64 libgmp10:amd64 libgmpxx4ldbl:amd64 libgnutls-dane0t64:amd64 libgnutls-openssl27t64:amd64 libgnutls28-dev:amd64 libgnutls30t64:amd64 libgomp1:amd64 libgomp1-amd64-cross libgssapi-krb5-2:amd64 libgssrpc4t64:amd64 libhogweed6t64:amd64 libhts-dev:amd64 libhts3t64:amd64 libhtscodecs2:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libidn2-0:amd64 libidn2-dev:amd64 libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkadm5clnt-mit12:amd64 libkadm5srv-mit12:amd64 libkdb5-10t64:amd64 libkeyutils1:amd64 libkrb5-3:amd64 libkrb5-dev:amd64 libkrb5support0:amd64 libldap-dev:amd64 libldap2:amd64 liblsan0:amd64 liblsan0-amd64-cross liblzma-dev:amd64 liblzma5:amd64 libmagic-mgc libmagic1t64 libncurses6:amd64 libnettle8t64:amd64 libnghttp2-14:amd64 libnghttp2-dev:amd64 libnghttp3-9:amd64 libnghttp3-dev:amd64 libngtcp2-16:amd64 libngtcp2-crypto-gnutls-dev:amd64 libngtcp2-crypto-gnutls8:amd64 libngtcp2-dev:amd64 libp11-kit-dev:amd64 libp11-kit0:amd64 libpipeline1 libpkgconf3 libpsl-dev:amd64 libpsl5t64:amd64 libquadmath0:amd64 libquadmath0-amd64-cross librtmp-dev:amd64 librtmp1:amd64 libsasl2-2:amd64 libsasl2-modules-db:amd64 libsparsehash-dev libssh2-1-dev:amd64 libssh2-1t64:amd64 libssl-dev:amd64 libssl3t64:amd64 libstdc++-14-dev:amd64 libstdc++-14-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtasn1-6:amd64 libtasn1-6-dev:amd64 libtinfo6:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunbound8:amd64 libunistring5 libunistring5:amd64 libxml2 libzstd-dev:amd64 libzstd1:amd64 linux-libc-dev-amd64-cross m4 man-db nettle-dev:amd64 pkgconf:amd64 pkgconf-bin po-debconf samtools:amd64 sensible-utils zlib1g:amd64 zlib1g-dev:amd64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc doc-base:amd64 gcc-14-locales cpp-14-doc cpp-doc dh-make gcc-14-doc manpages-dev flex bison gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff krb5-doc:amd64 glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 libnss-nisplus:amd64 manpages-dev:amd64 libcurl4-doc:amd64 libidn-dev:amd64 gmp-doc:amd64 libgmp10-doc:amd64 libmpfr-dev:amd64 dns-root-data:amd64 gnutls-bin:amd64 gnutls-doc:amd64 krb5-user:amd64 liblzma-doc:amd64 libnghttp2-doc:amd64 p11-kit-doc:amd64 libssl-doc:amd64 libstdc++-14-doc:amd64 libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl cwltool:amd64 Recommended packages: curl | wget | lynx bzip2-doc:amd64 ca-certificates:amd64 libarchive-cpio-perl krb5-locales:amd64 libldap-common:amd64 libgpm2:amd64 publicsuffix:amd64 libsasl2-modules:amd64 libtasn1-doc:amd64 libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils comerr-dev:amd64 cpp-14-x86-64-linux-gnu cpp-x86-64-linux-gnu crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dwz fakeroot file g++-14-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-14-base:amd64 gcc-14-cross-base gcc-14-x86-64-linux-gnu gcc-14-x86-64-linux-gnu-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian krb5-multidev:amd64 libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libbam-dev:amd64 libbrotli-dev:amd64 libbrotli1:amd64 libbz2-1.0:amd64 libbz2-dev:amd64 libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libcom-err2:amd64 libcrypt-dev:amd64 libcrypt1:amd64 libcurl3t64-gnutls:amd64 libcurl4-gnutls-dev:amd64 libdb5.3t64:amd64 libdebhelper-perl libdeflate-dev:amd64 libdeflate0:amd64 libelf1t64 libevent-2.1-7t64:amd64 libfakeroot libffi8:amd64 libfile-stripnondeterminism-perl libgcc-14-dev:amd64 libgcc-14-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgmp-dev:amd64 libgmp10:amd64 libgmpxx4ldbl:amd64 libgnutls-dane0t64:amd64 libgnutls-openssl27t64:amd64 libgnutls28-dev:amd64 libgnutls30t64:amd64 libgomp1:amd64 libgomp1-amd64-cross libgssapi-krb5-2:amd64 libgssrpc4t64:amd64 libhogweed6t64:amd64 libhts-dev:amd64 libhts3t64:amd64 libhtscodecs2:amd64 libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libidn2-0:amd64 libidn2-dev:amd64 libitm1:amd64 libitm1-amd64-cross libk5crypto3:amd64 libkadm5clnt-mit12:amd64 libkadm5srv-mit12:amd64 libkdb5-10t64:amd64 libkeyutils1:amd64 libkrb5-3:amd64 libkrb5-dev:amd64 libkrb5support0:amd64 libldap-dev:amd64 libldap2:amd64 liblsan0:amd64 liblsan0-amd64-cross liblzma-dev:amd64 liblzma5:amd64 libmagic-mgc libmagic1t64 libncurses6:amd64 libnettle8t64:amd64 libnghttp2-14:amd64 libnghttp2-dev:amd64 libnghttp3-9:amd64 libnghttp3-dev:amd64 libngtcp2-16:amd64 libngtcp2-crypto-gnutls-dev:amd64 libngtcp2-crypto-gnutls8:amd64 libngtcp2-dev:amd64 libp11-kit-dev:amd64 libp11-kit0:amd64 libpipeline1 libpkgconf3 libpsl-dev:amd64 libpsl5t64:amd64 libquadmath0:amd64 libquadmath0-amd64-cross librtmp-dev:amd64 librtmp1:amd64 libsasl2-2:amd64 libsasl2-modules-db:amd64 libsparsehash-dev libssh2-1-dev:amd64 libssh2-1t64:amd64 libssl-dev:amd64 libssl3t64:amd64 libstdc++-14-dev:amd64 libstdc++-14-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtasn1-6:amd64 libtasn1-6-dev:amd64 libtinfo6:amd64 libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libunbound8:amd64 libunistring5 libunistring5:amd64 libxml2 libzstd-dev:amd64 libzstd1:amd64 linux-libc-dev-amd64-cross m4 man-db nettle-dev:amd64 pkgconf:amd64 pkgconf-bin po-debconf samtools:amd64 sbuild-build-depends-main-dummy:amd64 sensible-utils zlib1g:amd64 zlib1g-dev:amd64 0 upgraded, 156 newly installed, 0 to remove and 0 not upgraded. Need to get 130 MB of archives. After this operation, 518 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [948 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.23.1-1 [241 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.40.4-5 [92.0 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-5 [284 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.72-3 [493 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.17-3 [862 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.23.1-1 [770 kB] Get:17 http://mirror.einval.org/debian unstable/main amd64 gcc-14-base amd64 14.2.0-17 [49.1 kB] Get:18 http://mirror.einval.org/debian unstable/main amd64 libgcc-s1 amd64 14.2.0-17 [72.7 kB] Get:19 http://mirror.einval.org/debian unstable/main amd64 libc6 amd64 2.40-7 [2815 kB] Get:20 http://mirror.einval.org/debian unstable/main amd64 libcrypt1 amd64 1:4.4.38-1 [90.1 kB] Get:21 http://mirror.einval.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.38-1 [119 kB] Get:22 http://mirror.einval.org/debian unstable/main amd64 libc6-dev amd64 2.40-7 [1957 kB] Get:23 http://mirror.einval.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2-1 [24.0 kB] Get:24 http://mirror.einval.org/debian unstable/main amd64 comerr-dev amd64 2.1-1.47.2-1 [55.7 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 gcc-14-x86-64-linux-gnu-base arm64 14.2.0-12cross1 [48.5 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 cpp-14-x86-64-linux-gnu arm64 14.2.0-12cross1 [10.4 MB] Get:27 http://mirror.einval.org/debian unstable/main arm64 cpp-x86-64-linux-gnu arm64 4:14.2.0-1 [4852 B] Get:28 http://mirror.einval.org/debian unstable/main arm64 binutils-x86-64-linux-gnu arm64 2.44-2 [1484 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 gcc-14-cross-base all 14.2.0-12cross1 [43.7 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-amd64-cross all 14.2.0-12cross1 [72.8 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libgomp1-amd64-cross all 14.2.0-12cross1 [129 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libitm1-amd64-cross all 14.2.0-12cross1 [25.3 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libatomic1-amd64-cross all 14.2.0-12cross1 [8976 B] Get:34 http://mirror.einval.org/debian unstable/main arm64 libasan8-amd64-cross all 14.2.0-12cross1 [2713 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 liblsan0-amd64-cross all 14.2.0-12cross1 [1204 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libtsan2-amd64-cross all 14.2.0-12cross1 [2449 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libc6-amd64-cross all 2.40-4cross1 [1526 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-amd64-cross all 14.2.0-12cross1 [666 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libubsan1-amd64-cross all 14.2.0-12cross1 [1074 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libhwasan0-amd64-cross all 14.2.0-12cross1 [1485 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-amd64-cross all 14.2.0-12cross1 [145 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libgcc-14-dev-amd64-cross all 14.2.0-12cross1 [2667 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 gcc-14-x86-64-linux-gnu arm64 14.2.0-12cross1 [20.0 MB] Get:44 http://mirror.einval.org/debian unstable/main arm64 gcc-x86-64-linux-gnu arm64 4:14.2.0-1 [1448 B] Get:45 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-amd64-cross all 6.12.6-1cross1 [2320 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-amd64-cross all 2.40-4cross1 [1956 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libstdc++-14-dev-amd64-cross all 14.2.0-12cross1 [2352 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 g++-14-x86-64-linux-gnu arm64 14.2.0-12cross1 [11.3 MB] Get:49 http://mirror.einval.org/debian unstable/main arm64 g++-x86-64-linux-gnu arm64 4:14.2.0-1 [1204 B] Get:50 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-amd64 all 12.12 [3552 B] Get:51 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.24.1 [90.9 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.5.4-3 [539 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B] Get:57 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libunistring5 arm64 1.3-1 [449 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libicu72 arm64 72.1-6 [9239 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.23.1-1 [1610 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.24.1 [920 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.37-1 [29.5 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.37-1 [74.9 kB] Get:68 http://mirror.einval.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-4 [32.8 kB] Get:69 http://mirror.einval.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-4 [80.9 kB] Get:70 http://mirror.einval.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:71 http://mirror.einval.org/debian unstable/main amd64 libzstd1 amd64 1.5.6+dfsg-2 [300 kB] Get:72 http://mirror.einval.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:73 http://mirror.einval.org/debian unstable/main amd64 libssl3t64 amd64 3.4.1-1 [2304 kB] Get:74 http://mirror.einval.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-4 [326 kB] Get:75 http://mirror.einval.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-4 [138 kB] Get:76 http://mirror.einval.org/debian unstable/main amd64 libgssrpc4t64 amd64 1.21.3-4 [60.0 kB] Get:77 http://mirror.einval.org/debian unstable/main amd64 libkadm5clnt-mit12 amd64 1.21.3-4 [42.2 kB] Get:78 http://mirror.einval.org/debian unstable/main amd64 libkdb5-10t64 amd64 1.21.3-4 [42.4 kB] Get:79 http://mirror.einval.org/debian unstable/main amd64 libkadm5srv-mit12 amd64 1.21.3-4 [54.2 kB] Get:80 http://mirror.einval.org/debian unstable/main amd64 krb5-multidev amd64 1.21.3-4 [126 kB] Get:81 http://mirror.einval.org/debian unstable/main amd64 libasan8 amd64 14.2.0-17 [2730 kB] Get:82 http://mirror.einval.org/debian unstable/main amd64 libatomic1 amd64 14.2.0-17 [9316 B] Get:83 http://mirror.einval.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get:84 http://mirror.einval.org/debian unstable/main amd64 libbam-dev amd64 0.1.19+dfsg-6 [118 kB] Get:85 http://mirror.einval.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get:86 http://mirror.einval.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b6 [316 kB] Get:87 http://mirror.einval.org/debian unstable/main amd64 libbz2-1.0 amd64 1.0.8-6 [37.9 kB] Get:88 http://mirror.einval.org/debian unstable/main amd64 libbz2-dev amd64 1.0.8-6 [31.4 kB] Get:89 http://mirror.einval.org/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-3 [560 kB] Get:90 http://mirror.einval.org/debian unstable/main amd64 libnettle8t64 amd64 3.10.1-1 [305 kB] Get:91 http://mirror.einval.org/debian unstable/main amd64 libhogweed6t64 amd64 3.10.1-1 [335 kB] Get:92 http://mirror.einval.org/debian unstable/main amd64 libunistring5 amd64 1.3-1 [476 kB] Get:93 http://mirror.einval.org/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get:94 http://mirror.einval.org/debian unstable/main amd64 libffi8 amd64 3.4.7-1 [23.9 kB] Get:95 http://mirror.einval.org/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-3 [425 kB] Get:96 http://mirror.einval.org/debian unstable/main amd64 libtasn1-6 amd64 4.20.0-2 [49.9 kB] Get:97 http://mirror.einval.org/debian unstable/main amd64 libgnutls30t64 amd64 3.8.9-2 [1464 kB] Get:98 http://mirror.einval.org/debian unstable/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-9 [704 kB] Get:99 http://mirror.einval.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8+b1 [19.9 kB] Get:100 http://mirror.einval.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8+b1 [57.6 kB] Get:101 http://mirror.einval.org/debian unstable/main amd64 libldap2 amd64 2.6.9+dfsg-1 [192 kB] Get:102 http://mirror.einval.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:103 http://mirror.einval.org/debian unstable/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] Get:104 http://mirror.einval.org/debian unstable/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] Get:105 http://mirror.einval.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] Get:106 http://mirror.einval.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:107 http://mirror.einval.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:108 http://mirror.einval.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:109 http://mirror.einval.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.12.1-3 [365 kB] Get:110 http://mirror.einval.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get:111 http://mirror.einval.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1+b1 [598 kB] Get:112 http://mirror.einval.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.9-2 [455 kB] Get:113 http://mirror.einval.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.9-2 [455 kB] Get:114 http://mirror.einval.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get:115 http://mirror.einval.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB] Get:116 http://mirror.einval.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.20.0-2 [99.2 kB] Get:117 http://mirror.einval.org/debian unstable/main amd64 libstdc++6 amd64 14.2.0-17 [713 kB] Get:118 http://mirror.einval.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB] Get:119 http://mirror.einval.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB] Get:120 http://mirror.einval.org/debian unstable/main amd64 nettle-dev amd64 3.10.1-1 [1318 kB] Get:121 http://mirror.einval.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.9-2 [1401 kB] Get:122 http://mirror.einval.org/debian unstable/main amd64 libkrb5-dev amd64 1.21.3-4 [15.9 kB] Get:123 http://mirror.einval.org/debian unstable/main amd64 libldap-dev amd64 2.6.9+dfsg-1 [307 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Get:126 http://mirror.einval.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get:127 http://mirror.einval.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get:128 http://mirror.einval.org/debian unstable/main amd64 libnghttp3-dev amd64 1.6.0-2 [88.5 kB] Get:129 http://mirror.einval.org/debian unstable/main amd64 libngtcp2-crypto-gnutls-dev amd64 1.9.1-1 [23.1 kB] Get:130 http://mirror.einval.org/debian unstable/main amd64 libngtcp2-dev amd64 1.9.1-1 [167 kB] Get:131 http://mirror.einval.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get:132 http://mirror.einval.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get:133 http://mirror.einval.org/debian unstable/main amd64 libssl-dev amd64 3.4.1-1 [2787 kB] Get:134 http://mirror.einval.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get:135 http://mirror.einval.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-2 [365 kB] Get:136 http://mirror.einval.org/debian unstable/main amd64 libcurl4-gnutls-dev amd64 8.12.1-3 [480 kB] Get:137 http://mirror.einval.org/debian unstable/main amd64 libdeflate0 amd64 1.23-1+b1 [47.5 kB] Get:138 http://mirror.einval.org/debian unstable/main amd64 libdeflate-dev amd64 1.23-1+b1 [56.0 kB] Get:139 http://mirror.einval.org/debian unstable/main amd64 libgomp1 amd64 14.2.0-17 [137 kB] Get:140 http://mirror.einval.org/debian unstable/main amd64 libitm1 amd64 14.2.0-17 [25.9 kB] Get:141 http://mirror.einval.org/debian unstable/main amd64 liblsan0 amd64 14.2.0-17 [1205 kB] Get:142 http://mirror.einval.org/debian unstable/main amd64 libtsan2 amd64 14.2.0-17 [2460 kB] Get:143 http://mirror.einval.org/debian unstable/main amd64 libubsan1 amd64 14.2.0-17 [1075 kB] Get:144 http://mirror.einval.org/debian unstable/main amd64 libhwasan0 amd64 14.2.0-17 [1489 kB] Get:145 http://mirror.einval.org/debian unstable/main amd64 libquadmath0 amd64 14.2.0-17 [145 kB] Get:146 http://mirror.einval.org/debian unstable/main amd64 libgcc-14-dev amd64 14.2.0-17 [2673 kB] Get:147 http://mirror.einval.org/debian unstable/main amd64 libhtscodecs2 amd64 1.6.1-2 [95.8 kB] Get:148 http://mirror.einval.org/debian unstable/main amd64 liblzma5 amd64 5.6.3-1+b1 [272 kB] Get:149 http://mirror.einval.org/debian unstable/main amd64 libhts3t64 amd64 1.21+ds-1 [463 kB] Get:150 http://mirror.einval.org/debian unstable/main amd64 liblzma-dev amd64 5.6.3-1+b1 [316 kB] Get:151 http://mirror.einval.org/debian unstable/main amd64 libhts-dev amd64 1.21+ds-1 [1733 kB] Get:152 http://mirror.einval.org/debian unstable/main amd64 libtinfo6 amd64 6.5+20250216-1 [348 kB] Get:153 http://mirror.einval.org/debian unstable/main amd64 libncurses6 amd64 6.5+20250216-1 [105 kB] Get:154 http://mirror.einval.org/debian unstable/main arm64 libsparsehash-dev all 2.0.3-2 [76.8 kB] Get:155 http://mirror.einval.org/debian unstable/main amd64 libstdc++-14-dev amd64 14.2.0-17 [2373 kB] Get:156 http://mirror.einval.org/debian unstable/main amd64 samtools amd64 1.21-1 [667 kB] Preconfiguring packages ... Fetched 130 MB in 2s (85.5 MB/s) Selecting previously unselected package sensible-utils. (Reading database ... 11983 files and directories currently installed.) Preparing to unpack .../000-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../001-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../002-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../003-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../004-gettext-base_0.23.1-1_arm64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../005-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../006-groff-base_1.23.0-7_arm64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../007-bsdextrautils_2.40.4-5_arm64.deb ... Unpacking bsdextrautils (2.40.4-5) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../008-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../009-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.19-5_arm64.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... 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Preparing to unpack .../018-libcrypt1_1%3a4.4.38-1_amd64.deb ... Unpacking libcrypt1:amd64 (1:4.4.38-1) ... Selecting previously unselected package libcrypt-dev:amd64. Preparing to unpack .../019-libcrypt-dev_1%3a4.4.38-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.38-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../020-libc6-dev_2.40-7_amd64.deb ... Unpacking libc6-dev:amd64 (2.40-7) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../021-libcom-err2_1.47.2-1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2-1) ... Selecting previously unselected package comerr-dev:amd64. Preparing to unpack .../022-comerr-dev_2.1-1.47.2-1_amd64.deb ... Unpacking comerr-dev:amd64 (2.1-1.47.2-1) ... Selecting previously unselected package gcc-14-x86-64-linux-gnu-base:arm64. Preparing to unpack .../023-gcc-14-x86-64-linux-gnu-base_14.2.0-12cross1_arm64.deb ... Unpacking gcc-14-x86-64-linux-gnu-base:arm64 (14.2.0-12cross1) ... Selecting previously unselected package cpp-14-x86-64-linux-gnu. Preparing to unpack .../024-cpp-14-x86-64-linux-gnu_14.2.0-12cross1_arm64.deb ... Unpacking cpp-14-x86-64-linux-gnu (14.2.0-12cross1) ... Selecting previously unselected package cpp-x86-64-linux-gnu. Preparing to unpack .../025-cpp-x86-64-linux-gnu_4%3a14.2.0-1_arm64.deb ... Unpacking cpp-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package binutils-x86-64-linux-gnu. Preparing to unpack .../026-binutils-x86-64-linux-gnu_2.44-2_arm64.deb ... Unpacking binutils-x86-64-linux-gnu (2.44-2) ... Selecting previously unselected package gcc-14-cross-base. Preparing to unpack .../027-gcc-14-cross-base_14.2.0-12cross1_all.deb ... Unpacking gcc-14-cross-base (14.2.0-12cross1) ... Selecting previously unselected package libgcc-s1-amd64-cross. Preparing to unpack .../028-libgcc-s1-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libgcc-s1-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libgomp1-amd64-cross. Preparing to unpack .../029-libgomp1-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libgomp1-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libitm1-amd64-cross. Preparing to unpack .../030-libitm1-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libitm1-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libatomic1-amd64-cross. Preparing to unpack .../031-libatomic1-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libatomic1-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libasan8-amd64-cross. Preparing to unpack .../032-libasan8-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libasan8-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package liblsan0-amd64-cross. Preparing to unpack .../033-liblsan0-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking liblsan0-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libtsan2-amd64-cross. Preparing to unpack .../034-libtsan2-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libtsan2-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libc6-amd64-cross. Preparing to unpack .../035-libc6-amd64-cross_2.40-4cross1_all.deb ... Unpacking libc6-amd64-cross (2.40-4cross1) ... Selecting previously unselected package libstdc++6-amd64-cross. Preparing to unpack .../036-libstdc++6-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libstdc++6-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libubsan1-amd64-cross. Preparing to unpack .../037-libubsan1-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libubsan1-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libhwasan0-amd64-cross. Preparing to unpack .../038-libhwasan0-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libhwasan0-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libquadmath0-amd64-cross. Preparing to unpack .../039-libquadmath0-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libquadmath0-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package libgcc-14-dev-amd64-cross. Preparing to unpack .../040-libgcc-14-dev-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libgcc-14-dev-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package gcc-14-x86-64-linux-gnu. Preparing to unpack .../041-gcc-14-x86-64-linux-gnu_14.2.0-12cross1_arm64.deb ... Unpacking gcc-14-x86-64-linux-gnu (14.2.0-12cross1) ... Selecting previously unselected package gcc-x86-64-linux-gnu. Preparing to unpack .../042-gcc-x86-64-linux-gnu_4%3a14.2.0-1_arm64.deb ... Unpacking gcc-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package linux-libc-dev-amd64-cross. Preparing to unpack .../043-linux-libc-dev-amd64-cross_6.12.6-1cross1_all.deb ... Unpacking linux-libc-dev-amd64-cross (6.12.6-1cross1) ... Selecting previously unselected package libc6-dev-amd64-cross. Preparing to unpack .../044-libc6-dev-amd64-cross_2.40-4cross1_all.deb ... Unpacking libc6-dev-amd64-cross (2.40-4cross1) ... Selecting previously unselected package libstdc++-14-dev-amd64-cross. Preparing to unpack .../045-libstdc++-14-dev-amd64-cross_14.2.0-12cross1_all.deb ... Unpacking libstdc++-14-dev-amd64-cross (14.2.0-12cross1) ... Selecting previously unselected package g++-14-x86-64-linux-gnu. Preparing to unpack .../046-g++-14-x86-64-linux-gnu_14.2.0-12cross1_arm64.deb ... Unpacking g++-14-x86-64-linux-gnu (14.2.0-12cross1) ... Selecting previously unselected package g++-x86-64-linux-gnu. Preparing to unpack .../047-g++-x86-64-linux-gnu_4%3a14.2.0-1_arm64.deb ... Unpacking g++-x86-64-linux-gnu (4:14.2.0-1) ... Selecting previously unselected package crossbuild-essential-amd64. Preparing to unpack .../048-crossbuild-essential-amd64_12.12_all.deb ... Unpacking crossbuild-essential-amd64 (12.12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../049-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../050-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../051-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../052-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../053-libfile-stripnondeterminism-perl_1.14.1-2_all.deb ... 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Setting up fakeroot (1.37-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libitm1-amd64-cross (14.2.0-12cross1) ... Setting up autotools-dev (20220109.1) ... Setting up libpkgconf3:arm64 (1.8.1-4) ... Setting up libatomic1-amd64-cross (14.2.0-12cross1) ... Setting up libunistring5:arm64 (1.3-1) ... Setting up libquadmath0-amd64-cross (14.2.0-12cross1) ... Setting up autopoint (0.23.1-1) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-12cross1) ... Setting up libc6-amd64-cross (2.40-4cross1) ... Setting up pkgconf-bin (1.8.1-4) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libgcc-s1-amd64-cross (14.2.0-12cross1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up binutils-x86-64-linux-gnu (2.44-2) ... Setting up libstdc++6-amd64-cross (14.2.0-12cross1) ... Setting up cpp-x86-64-linux-gnu (4:14.2.0-1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-2) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-3) ... Setting up libasan8-amd64-cross (14.2.0-12cross1) ... Setting up liblsan0-amd64-cross (14.2.0-12cross1) ... Setting up libc6-dev-amd64-cross (2.40-4cross1) ... Setting up libtsan2-amd64-cross (14.2.0-12cross1) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libhwasan0-amd64-cross (14.2.0-12cross1) ... Setting up libubsan1-amd64-cross (14.2.0-12cross1) ... Setting up dh-strip-nondeterminism (1.14.1-2) ... Setting up libgcc-14-dev-amd64-cross (14.2.0-12cross1) ... Setting up groff-base (1.23.0-7) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-12cross1) ... Setting up libstdc++-14-dev-amd64-cross (14.2.0-12cross1) ... Setting up gcc-x86-64-linux-gnu (4:14.2.0-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up g++-14-x86-64-linux-gnu (14.2.0-12cross1) ... Setting up g++-x86-64-linux-gnu (4:14.2.0-1) ... Setting up debhelper (13.24.1) ... Setting up crossbuild-essential-amd64 (12.12) ... Setting up libgcc-s1:amd64 (14.2.0-17) ... Setting up libc6:amd64 (2.40-7) ... Setting up libnghttp3-9:amd64 (1.6.0-2) ... Setting up libnghttp3-dev:amd64 (1.6.0-2) ... Setting up libdb5.3t64:amd64 (5.3.28+dfsg2-9) ... Setting up libffi8:amd64 (3.4.7-1) ... Setting up libhwasan0:amd64 (14.2.0-17) ... Setting up libasan8:amd64 (14.2.0-17) ... Setting up libtasn1-6:amd64 (4.20.0-2) ... Setting up libngtcp2-16:amd64 (1.9.1-1) ... Setting up libtsan2:amd64 (14.2.0-17) ... Setting up libbz2-1.0:amd64 (1.0.8-6) ... Setting up libtasn1-6-dev:amd64 (4.20.0-2) ... Setting up libstdc++6:amd64 (14.2.0-17) ... Setting up liblsan0:amd64 (14.2.0-17) ... Setting up libitm1:amd64 (14.2.0-17) ... Setting up libtinfo6:amd64 (6.5+20250216-1) ... Setting up libhtscodecs2:amd64 (1.6.1-2) ... Setting up libzstd1:amd64 (1.5.6+dfsg-2) ... Setting up libkeyutils1:amd64 (1.6.3-4) ... Setting up libzstd-dev:amd64 (1.5.6+dfsg-2) ... Setting up liblzma5:amd64 (5.6.3-1+b1) ... Setting up libbrotli1:amd64 (1.1.0-2+b6) ... Setting up libnghttp2-14:amd64 (1.64.0-1) ... Setting up libdeflate0:amd64 (1.23-1+b1) ... Setting up libevent-2.1-7t64:amd64 (2.1.12-stable-10+b1) ... Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:amd64 (1:4.4.38-1) ... Setting up libcom-err2:amd64 (1.47.2-1) ... Setting up libngtcp2-dev:amd64 (1.9.1-1) ... Setting up libgomp1:amd64 (14.2.0-17) ... Setting up libkrb5support0:amd64 (1.21.3-4) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-8+b1) ... Setting up libnettle8t64:amd64 (3.10.1-1) ... Setting up libgmp10:amd64 (2:6.3.0+dfsg-3) ... Setting up libncurses6:amd64 (6.5+20250216-1) ... Setting up libquadmath0:amd64 (14.2.0-17) ... Setting up libp11-kit0:amd64 (0.25.5-3) ... Setting up libunistring5:amd64 (1.3-1) ... Setting up libatomic1:amd64 (14.2.0-17) ... Setting up libk5crypto3:amd64 (1.21.3-4) ... Setting up liblzma-dev:amd64 (5.6.3-1+b1) ... Setting up libubsan1:amd64 (14.2.0-17) ... Setting up libhogweed6t64:amd64 (3.10.1-1) ... Setting up libcrypt-dev:amd64 (1:4.4.38-1) ... Setting up libc6-dev:amd64 (2.40-7) ... Setting up libgcc-14-dev:amd64 (14.2.0-17) ... Setting up libdeflate-dev:amd64 (1.23-1+b1) ... Setting up libstdc++-14-dev:amd64 (14.2.0-17) ... Setting up libbrotli-dev:amd64 (1.1.0-2+b6) ... Setting up libp11-kit-dev:amd64 (0.25.5-3) ... Setting up libbz2-dev:amd64 (1.0.8-6) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libssl3t64:amd64 (3.4.1-1) ... Setting up libidn2-0:amd64 (2.3.7-2+b1) ... Setting up libunbound8:amd64 (1.22.0-1+b1) ... Setting up libgmpxx4ldbl:amd64 (2:6.3.0+dfsg-3) ... Setting up comerr-dev:amd64 (2.1-1.47.2-1) ... Setting up libssl-dev:amd64 (3.4.1-1) ... Setting up libidn2-dev:amd64 (2.3.7-2+b1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-8+b1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libkrb5-3:amd64 (1.21.3-4) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libldap2:amd64 (2.6.9+dfsg-1) ... Setting up libgnutls30t64:amd64 (3.8.9-2) ... Setting up libgnutls-openssl27t64:amd64 (3.8.9-2) ... Setting up libgmp-dev:amd64 (2:6.3.0+dfsg-3) ... Setting up nettle-dev:amd64 (3.10.1-1) ... Setting up libpsl5t64:amd64 (0.21.2-1.1+b1) ... Setting up libpsl-dev:amd64 (0.21.2-1.1+b1) ... Setting up libgnutls-dane0t64:amd64 (3.8.9-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libldap-dev:amd64 (2.6.9+dfsg-1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-4) ... Setting up libbam-dev:amd64 (0.1.19+dfsg-6) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Setting up libgnutls28-dev:amd64 (3.8.9-2) ... Setting up libcurl3t64-gnutls:amd64 (8.12.1-3) ... Setting up libngtcp2-crypto-gnutls-dev:amd64 (1.9.1-1) ... Setting up libgssrpc4t64:amd64 (1.21.3-4) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libhts3t64:amd64 (1.21+ds-1) ... Setting up libkadm5clnt-mit12:amd64 (1.21.3-4) ... Setting up libkdb5-10t64:amd64 (1.21.3-4) ... Setting up samtools:amd64 (1.21-1) ... Setting up libkadm5srv-mit12:amd64 (1.21.3-4) ... Setting up krb5-multidev:amd64 (1.21.3-4) ... Setting up libkrb5-dev:amd64 (1.21.3-4) ... Setting up libcurl4-gnutls-dev:amd64 (8.12.1-3) ... Setting up libhts-dev:amd64 (1.21+ds-1) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for base-files (13.6) ... Processing triggers for libc-bin (2.40-7) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) arm64 (aarch64) Toolchain package versions: binutils_2.44-2 dpkg-dev_1.22.15 g++-14_14.2.0-17 gcc-14_14.2.0-17 libc6-dev_2.40-7 libstdc++-14-dev_14.2.0-17 libstdc++-14-dev-amd64-cross_14.2.0-12cross1 libstdc++6_14.2.0-17 libstdc++6-amd64-cross_14.2.0-12cross1 linux-libc-dev_6.12.16-1 Package versions: apt_2.9.30 apt-utils_2.9.30 autoconf_2.72-3 automake_1:1.17-3 autopoint_0.23.1-1 autotools-dev_20220109.1 base-files_13.6 base-passwd_3.6.6 bash_5.2.37-1.1 binutils_2.44-2 binutils-aarch64-linux-gnu_2.44-2 binutils-common_2.44-2 binutils-x86-64-linux-gnu_2.44-2 bsdextrautils_2.40.4-5 bsdutils_1:2.40.4-5 build-essential_12.12 bzip2_1.0.8-6 comerr-dev_2.1-1.47.2-1 coreutils_9.5-1+b1 cpp_4:14.2.0-1 cpp-14_14.2.0-17 cpp-14-aarch64-linux-gnu_14.2.0-17 cpp-14-x86-64-linux-gnu_14.2.0-12cross1 cpp-aarch64-linux-gnu_4:14.2.0-1 cpp-x86-64-linux-gnu_4:14.2.0-1 crossbuild-essential-amd64_12.12 dash_0.5.12-12 debconf_1.5.89 debhelper_13.24.1 debian-archive-keyring_2023.4 debianutils_5.21 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-2 dpkg_1.22.15 dpkg-dev_1.22.15 dwz_0.15-1+b1 fakeroot_1.37-1 file_1:5.45-3+b1 findutils_4.10.0-3 g++_4:14.2.0-1 g++-14_14.2.0-17 g++-14-aarch64-linux-gnu_14.2.0-17 g++-14-x86-64-linux-gnu_14.2.0-12cross1 g++-aarch64-linux-gnu_4:14.2.0-1 g++-x86-64-linux-gnu_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-17 gcc-14-aarch64-linux-gnu_14.2.0-17 gcc-14-base_14.2.0-17 gcc-14-cross-base_14.2.0-12cross1 gcc-14-x86-64-linux-gnu_14.2.0-12cross1 gcc-14-x86-64-linux-gnu-base_14.2.0-12cross1 gcc-aarch64-linux-gnu_4:14.2.0-1 gcc-x86-64-linux-gnu_4:14.2.0-1 gettext_0.23.1-1 gettext-base_0.23.1-1 grep_3.11-4+b1 groff-base_1.23.0-7 gzip_1.13-1 hostname_3.25 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 krb5-multidev_1.21.3-4 libacl1_2.3.2-2+b1 libapt-pkg7.0_2.9.30 libarchive-zip-perl_1.68-1 libasan8_14.2.0-17 libasan8-amd64-cross_14.2.0-12cross1 libatomic1_14.2.0-17 libatomic1-amd64-cross_14.2.0-12cross1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b1 libbam-dev_0.1.19+dfsg-6 libbinutils_2.44-2 libblkid1_2.40.4-5 libbrotli-dev_1.1.0-2+b6 libbrotli1_1.1.0-2+b6 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.40-7 libc-dev-bin_2.40-7 libc6_2.40-7 libc6-amd64-cross_2.40-4cross1 libc6-dev_2.40-7 libc6-dev-amd64-cross_2.40-4cross1 libcap-ng0_0.8.5-4 libcap2_1:2.73-4 libcc1-0_14.2.0-17 libcom-err2_1.47.2-1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-2 libctf0_2.44-2 libcurl3t64-gnutls_8.12.1-3 libcurl4-gnutls-dev_8.12.1-3 libdb5.3t64_5.3.28+dfsg2-9 libdebconfclient0_0.277 libdebhelper-perl_13.24.1 libdeflate-dev_1.23-1+b1 libdeflate0_1.23-1+b1 libdpkg-perl_1.22.15 libelf1t64_0.192-4 libevent-2.1-7t64_2.1.12-stable-10+b1 libfakeroot_1.37-1 libffi8_3.4.7-1 libfile-stripnondeterminism-perl_1.14.1-2 libgcc-14-dev_14.2.0-17 libgcc-14-dev-amd64-cross_14.2.0-12cross1 libgcc-s1_14.2.0-17 libgcc-s1-amd64-cross_14.2.0-12cross1 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-2 libgnutls-openssl27t64_3.8.9-2 libgnutls28-dev_3.8.9-2 libgnutls30t64_3.8.9-2 libgomp1_14.2.0-17 libgomp1-amd64-cross_14.2.0-12cross1 libgprofng0_2.44-2 libgssapi-krb5-2_1.21.3-4 libgssrpc4t64_1.21.3-4 libhogweed6t64_3.10.1-1 libhts-dev_1.21+ds-1 libhts3t64_1.21+ds-1 libhtscodecs2_1.6.1-2 libhwasan0_14.2.0-17 libhwasan0-amd64-cross_14.2.0-12cross1 libicu72_72.1-6 libidn2-0_2.3.7-2+b1 libidn2-dev_2.3.7-2+b1 libisl23_0.27-1 libitm1_14.2.0-17 libitm1-amd64-cross_14.2.0-12cross1 libjansson4_2.14-2+b3 libk5crypto3_1.21.3-4 libkadm5clnt-mit12_1.21.3-4 libkadm5srv-mit12_1.21.3-4 libkdb5-10t64_1.21.3-4 libkeyutils1_1.6.3-4 libkrb5-3_1.21.3-4 libkrb5-dev_1.21.3-4 libkrb5support0_1.21.3-4 libldap-dev_2.6.9+dfsg-1 libldap2_2.6.9+dfsg-1 liblsan0_14.2.0-17 liblsan0-amd64-cross_14.2.0-12cross1 liblz4-1_1.10.0-3 liblzma-dev_5.6.3-1+b1 liblzma5_5.6.3-1+b1 libmagic-mgc_1:5.45-3+b1 libmagic1t64_1:5.45-3+b1 libmd0_1.1.0-2+b1 libmount1_2.40.4-5 libmpc3_1.3.1-1+b3 libmpfr6_4.2.1-1+b2 libncurses6_6.5+20250216-1 libnettle8t64_3.10.1-1 libnghttp2-14_1.64.0-1 libnghttp2-dev_1.64.0-1 libnghttp3-9_1.6.0-2 libnghttp3-dev_1.6.0-2 libngtcp2-16_1.9.1-1 libngtcp2-crypto-gnutls-dev_1.9.1-1 libngtcp2-crypto-gnutls8_1.9.1-1 libngtcp2-dev_1.9.1-1 libp11-kit-dev_0.25.5-3 libp11-kit0_0.25.5-3 libpam-modules_1.7.0-3 libpam-modules-bin_1.7.0-3 libpam-runtime_1.7.0-3 libpam0g_1.7.0-3 libpcre2-8-0_10.45-1 libperl5.40_5.40.1-2 libpipeline1_1.5.8-1 libpkgconf3_1.8.1-4 libpsl-dev_0.21.2-1.1+b1 libpsl5t64_0.21.2-1.1+b1 libquadmath0_14.2.0-17 libquadmath0-amd64-cross_14.2.0-12cross1 librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5 librtmp1_2.4+20151223.gitfa8646d.1-2+b5 libsasl2-2_2.1.28+dfsg1-8+b1 libsasl2-modules-db_2.1.28+dfsg1-8+b1 libseccomp2_2.5.5-2 libselinux1_3.8-4 libsframe1_2.44-2 libsmartcols1_2.40.4-5 libsparsehash-dev_2.0.3-2 libssh2-1-dev_1.11.1-1 libssh2-1t64_1.11.1-1 libssl-dev_3.4.1-1 libssl3t64_3.4.1-1 libstdc++-14-dev_14.2.0-17 libstdc++-14-dev-amd64-cross_14.2.0-12cross1 libstdc++6_14.2.0-17 libstdc++6-amd64-cross_14.2.0-12cross1 libsystemd0_257.3-1 libtasn1-6_4.20.0-2 libtasn1-6-dev_4.20.0-2 libtinfo6_6.5+20250216-1 libtool_2.5.4-3 libtsan2_14.2.0-17 libtsan2-amd64-cross_14.2.0-12cross1 libubsan1_14.2.0-17 libubsan1-amd64-cross_14.2.0-12cross1 libuchardet0_0.0.8-1+b2 libudev1_257.3-1 libunbound8_1.22.0-1+b1 libunistring5_1.3-1 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+------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: stacks Binary: stacks Architecture: any Version: 2.68+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://creskolab.uoregon.edu/stacks/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/stacks Vcs-Git: https://salsa.debian.org/med-team/stacks.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), automake, zlib1g-dev, libbam-dev, libsparsehash-dev, samtools, libhts-dev Package-List: stacks deb science optional arch=any Checksums-Sha1: 84d9fefcc2da0bdeedd86d7dc994ef5b84012806 371032 stacks_2.68+dfsg.orig.tar.xz a4b257a1997837310253bbae16d2e7b4b9eaee6b 12488 stacks_2.68+dfsg-2.debian.tar.xz Checksums-Sha256: d5277660330547502069d0976869038e9f47946ef7a8e91bf1213dbc0185072c 371032 stacks_2.68+dfsg.orig.tar.xz e07482fc23eb570d9c43a560055b051f88430b001a86a9b40223e3d5dc4e283c 12488 stacks_2.68+dfsg-2.debian.tar.xz Files: 13bbb30a0414696ac59e3d98d1723d00 371032 stacks_2.68+dfsg.orig.tar.xz c534f4ad4dbee58b2bcbb1a06a37472b 12488 stacks_2.68+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmexvEUUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdoXEA//VJ/FgP1rvPK6Y2fdIUOsOvsdBFYw l9bEvoCMNQrpB0rtotfJ7HtfU+z1rvh/sydyGLYCXvxHfcyFXZHKh8EzjcxHsTUC aQD+90m2S9X0xUjqZoh6TvMbJsJPB845dJayzCgTu5Zav9VEbMj+smXy81OIQP+0 EH7wrx1Cdyqf8v39Dxrft0ARdi4O5WCXRtay2VR0E1UpDoMQ8yTlR/ooiZVD/yhe xOo1wiripgPVFe/IJGH1Y9IjGD6CDB01pxvJrDfs7WKViMQ0YL1pGSQQxVFDdnPv 4bmpgpS2qCJ+KP+JjIA09VifUta4w6urk2ouXV7KX1w1khPbUAMIrlPpa9LQ3owQ B4MtordioWMMTPw8wafqe8RdI8zb0AdwGAW3vFhw/hhMd0lQYVnLAnF28sW6aN+h Hg9qCNKmm9gtyAyUdv2OymOcq+SO/KbzZsZj+E4yXWLlXFSdj+TY99ArhEfhQI3W A4iVivodaEyh/YxhmQT+cqne43BWmYZW0R0IzFDWf4p8mROxqJNfSKETzEDXiUa8 zIBz+gc9uyCXeSWfliCrEc84kvKFOxd+Whe2E0CF6Z95SNuOp2rIpRVKVEhWGpNJ fnQo3M4gJw/thOxHpwST8MLh2NWJZWtaSvof6LOZq4RGJwuWeQL9nBppEOjfvwml MObsIAsfY1yB3YE= =FAjp -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./stacks_2.68+dfsg-2.dsc: unsupported subcommand dpkg-source: info: extracting stacks in /<> dpkg-source: info: unpacking stacks_2.68+dfsg.orig.tar.xz dpkg-source: info: unpacking stacks_2.68+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying RisR.patch dpkg-source: info: applying script-exe-paths dpkg-source: info: applying use_debian_packaged_htslib.patch dpkg-source: info: applying fix_spelling_errors.patch dpkg-source: info: applying change_program_exit_to_success.patch dpkg-source: info: applying offer_help_option_for_stacks_gdb.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aamd64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package stacks dpkg-buildpackage: info: source version 2.68+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f ./constants.php make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:28: warning: The macro 'AC_HEADER_STDC' is obsolete. configure.ac:28: You should run autoupdate. ./lib/autoconf/headers.m4:663: AC_HEADER_STDC is expanded from... configure.ac:28: the top level configure.ac:20: installing 'config/ar-lib' configure.ac:15: installing 'config/compile' configure.ac:7: installing 'config/install-sh' configure.ac:7: installing 'config/missing' Makefile.am: installing 'config/depcomp' parallel-tests: installing 'config/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' dh_auto_configure -- --enable-sparsehash --enable-bam \ --with-bam-include-path=/usr/include/samtools \ --with-bam-lib-path=/usr/lib ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=x86_64-linux-gnu --enable-sparsehash --enable-bam --with-bam-include-path=/usr/include/samtools --with-bam-lib-path=/usr/lib checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for x86_64-linux-gnu-strip... x86_64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking for x86_64-linux-gnu-g++... x86_64-linux-gnu-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether x86_64-linux-gnu-g++ accepts -g... yes checking for x86_64-linux-gnu-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of x86_64-linux-gnu-g++... none checking for x86_64-linux-gnu-gcc... x86_64-linux-gnu-gcc checking whether the compiler supports GNU C... yes checking whether x86_64-linux-gnu-gcc accepts -g... yes checking for x86_64-linux-gnu-gcc option to enable C11 features... none needed checking whether x86_64-linux-gnu-gcc understands -c and -o together... yes checking dependency style of x86_64-linux-gnu-gcc... none checking whether x86_64-linux-gnu-g++ supports C++11 features by default... yes checking for x86_64-linux-gnu-ranlib... x86_64-linux-gnu-ranlib checking for x86_64-linux-gnu-ar... x86_64-linux-gnu-ar checking the archiver (x86_64-linux-gnu-ar) interface... ar checking for omp_set_num_threads in -lgomp... yes checking for gzread in -lz... yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for float.h... yes checking for limits.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for x86_64-linux-gnu-gcc option to support OpenMP... -fopenmp checking for _Bool... yes checking for stdbool.h that conforms to C99 or later... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether closedir returns void... no checking build system type... aarch64-unknown-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for GNU libc compatible malloc... yes checking for GNU libc compatible realloc... yes checking for floor... no checking for memset... yes checking for pow... no checking for sqrt... no checking for clock_gettime... yes checking for functional regular expressions... configure: WARNING: Requires g++ 4.9.0 or greater. no checking for gawk... (cached) mawk checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating config.h config.status: executing depfiles commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/ustacks.o src/ustacks.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/aln_utils.o src/aln_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/BamI.o src/BamI.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/catalog_utils.o src/catalog_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/cmb.o src/cmb.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/constants.o src/constants.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/DNANSeq.o src/DNANSeq.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/DNASeq4.o src/DNASeq4.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/DNASeq.o src/DNASeq.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/gzFasta.o src/gzFasta.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/input.o src/input.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/kmers.o src/kmers.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/locus.o src/locus.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/log_utils.o src/log_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/MetaPopInfo.o src/MetaPopInfo.cc src/MetaPopInfo.cc: In member function ‘void MetaPopInfo::fill_pop_indexes(std::map >&) const’: src/MetaPopInfo.cc:427:30: warning: narrowing conversion of ‘i’ from ‘std::size_t’ {aka ‘long unsigned int’} to ‘int’ [-Wnarrowing] 427 | pop_indexes.insert( {i, {pops_[i].first_sample, pops_[i].last_sample}} ); | ^ x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/models.o src/models.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/mstack.o src/mstack.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/mst.o src/mst.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/nucleotides.o src/nucleotides.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/renz.o src/renz.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/Seq.o src/Seq.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/sql_utilities.o src/sql_utilities.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/stacks.o src/stacks.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/utils.o src/utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/Vcf.o src/Vcf.cc rm -f libcore.a x86_64-linux-gnu-ar cr libcore.a src/aln_utils.o src/BamI.o src/catalog_utils.o src/cmb.o src/constants.o src/DNANSeq.o src/DNASeq4.o src/DNASeq.o src/gzFasta.o src/input.o src/kmers.o src/locus.o src/log_utils.o src/MetaPopInfo.o src/models.o src/mstack.o src/mst.o src/nucleotides.o src/renz.o src/Seq.o src/sql_utilities.o src/stacks.o src/utils.o src/Vcf.o x86_64-linux-gnu-ranlib libcore.a x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o ustacks src/ustacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/cstacks.o src/cstacks.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o cstacks src/cstacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/sstacks.o src/sstacks.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o sstacks src/sstacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/process_radtags.o src/process_radtags.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/clean.o src/clean.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/file_io.o src/file_io.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/write.o src/write.cc rm -f libclean.a x86_64-linux-gnu-ar cr libclean.a src/clean.o src/kmers.o src/file_io.o src/write.o x86_64-linux-gnu-ranlib libclean.a x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o process_radtags src/process_radtags.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/process_shortreads.o src/process_shortreads.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o process_shortreads src/process_shortreads.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/kmer_filter.o src/kmer_filter.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o kmer_filter src/kmer_filter.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/clone_filter.o src/clone_filter.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o clone_filter src/clone_filter.o -lhts libcore.a libclean.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/populations.o src/populations.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/bootstrap.o src/bootstrap.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/export_formats.o src/export_formats.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/mapping_utils.o src/mapping_utils.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/genotype_dictionaries.o src/genotype_dictionaries.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/PopSum.o src/PopSum.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/Hwp.o src/Hwp.cc rm -f libpop.a x86_64-linux-gnu-ar cr libpop.a src/bootstrap.o src/export_formats.o src/mapping_utils.o src/genotype_dictionaries.o src/PopSum.o src/Hwp.o x86_64-linux-gnu-ranlib libpop.a x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o populations src/populations.o -lhts libcore.a libpop.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/phasedstacks.o src/phasedstacks.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o phasedstacks src/phasedstacks.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/tsv2bam.o src/tsv2bam.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o tsv2bam src/tsv2bam.o -lhts libcore.a -lz -lgomp x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/gstacks.o src/gstacks.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/debruijn.o src/debruijn.cc x86_64-linux-gnu-g++ -DHAVE_CONFIG_H -I. -fopenmp -I./htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o src/SuffixTree.o src/SuffixTree.cc x86_64-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o gstacks src/gstacks.o src/debruijn.o src/SuffixTree.o -lhts libcore.a -lz -lgomp make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install --no-parallel make -j1 install DESTDIR=/<>/stacks-2.68\+dfsg/debian/stacks AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' /usr/bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c ustacks cstacks sstacks process_radtags process_shortreads kmer_filter clone_filter populations phasedstacks tsv2bam gstacks '/<>/debian/stacks/usr/bin' /usr/bin/mkdir -p '/<>/debian/stacks/usr/bin' /usr/bin/install -c scripts/denovo_map.pl scripts/ref_map.pl scripts/stacks-integrate-alignments scripts/stacks-dist-extract scripts/stacks-private-alleles scripts/stacks-gdb scripts/stacks-samtools-tview scripts/stacks-count-reads-per-sample-per-locus scripts/stacks-hist2d-loci-samples-coverage '/<>/debian/stacks/usr/bin' make install-data-hook make[5]: Entering directory '/<>' sed -e 's,_VERSION_,2.68,' -e 's,_BINDIR_,/usr/libexec/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/denovo_map.pl > /<>/debian/stacks/usr/bin/denovo_map.pl.subst mv /<>/debian/stacks/usr/bin/denovo_map.pl.subst /<>/debian/stacks/usr/bin/denovo_map.pl chmod +x /<>/debian/stacks/usr/bin/denovo_map.pl sed -e 's,_VERSION_,2.68,' -e 's,_BINDIR_,/usr/libexec/stacks/bin/,g' -e 's,_PKGDATADIR_,/usr/share/stacks/,g' /<>/debian/stacks/usr/bin/ref_map.pl > /<>/debian/stacks/usr/bin/ref_map.pl.subst mv /<>/debian/stacks/usr/bin/ref_map.pl.subst /<>/debian/stacks/usr/bin/ref_map.pl chmod +x /<>/debian/stacks/usr/bin/ref_map.pl sed -i.bkp -e 's,_VERSION_,2.68,' /<>/debian/stacks/usr/bin/stacks-integrate-alignments sed -i.bkp -e 's,_VERSION_,2.68,' /<>/debian/stacks/usr/bin/stacks-samtools-tview rm -f /<>/debian/stacks/usr/bin/stacks-integrate-alignments.bkp rm -f /<>/debian/stacks/usr/bin/stacks-samtools-tview.bkp chmod +x /<>/debian/stacks/usr/bin/stacks-integrate-alignments chmod +x /<>/debian/stacks/usr/bin/stacks-dist-extract chmod +x /<>/debian/stacks/usr/bin/stacks-gdb make[5]: Leaving directory '/<>' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install make[1]: Entering directory '/<>' mkdir -p debian/stacks/usr/libexec/stacks mv debian/stacks/usr/bin debian/stacks/usr/libexec/stacks cd debian/stacks/usr/libexec/stacks/bin && \ for f in *.pl ; do \ ln -s "$f" "`basename $f .pl`" ; \ sed -i '1s?^#!/usr/bin/env.*perl?#!/usr/bin/perl?' $f ; \ done dh_install make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_perl -a debian/rules override_dh_link make[1]: Entering directory '/<>' dh_link mkdir -p debian/stacks/usr/libexec/debian-med/bin cd debian/stacks/usr/libexec/debian-med/bin && \ for f in `ls /<>/debian/stacks/usr/libexec/stacks/bin` ; do \ ln -s ../../stacks/bin/$f ; \ done make[1]: Leaving directory '/<>' dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package stacks: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'stacks' in '../stacks_2.68+dfsg-2_amd64.deb'. dpkg-deb: building package 'stacks-dbgsym' in '../stacks-dbgsym_2.68+dfsg-2_amd64.deb'. dpkg-genbuildinfo --build=any -O../stacks_2.68+dfsg-2_amd64.buildinfo dpkg-genchanges --build=any -O../stacks_2.68+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-02-26T05:39:05Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ --------------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ stacks_2.68+dfsg-2_amd64.changes: --------------------------------- Format: 1.8 Date: Sun, 16 Feb 2025 10:54:31 +0100 Source: stacks Binary: stacks stacks-dbgsym Built-For-Profiles: cross nocheck Architecture: amd64 Version: 2.68+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: stacks - pipeline for building loci from short-read DNA sequences Closes: 1095396 Changes: stacks (2.68+dfsg-2) unstable; urgency=medium . * Team upload. . [ Andreas Tille ] * Remove Tim Booth since address is bouncing (Thank you for your work on this package, Tim) . [ Étienne Mollier ] * d/control: explicitly build-depend on automake. * d/rules: reinforce the fetch the TAP driver for any automake version. Unfortunately this change is not sufficient to put upstream's super secret test suite on tracks, so it is still disabled for the moment. (Closes: #1095396) * use_debian_packaged_htslib.patch: normalise Last-Update timestamp. Checksums-Sha1: 0034ea2ac9d077ded2fa300e3bfa03f93a942e94 30729564 stacks-dbgsym_2.68+dfsg-2_amd64.deb 036278d05bb4d27fe488aed9df7811d589a3425e 7005 stacks_2.68+dfsg-2_amd64.buildinfo 55ce968b1a8e675a6faf2958ec9c42b494dab21f 1260924 stacks_2.68+dfsg-2_amd64.deb Checksums-Sha256: 446604838cb238bad81cc433275ef3250262c5e155cbbb5798206e593c415b77 30729564 stacks-dbgsym_2.68+dfsg-2_amd64.deb 74de964529845684abcb6bcaecaced5368855bb8036b2b49eb70ebcd806e85e9 7005 stacks_2.68+dfsg-2_amd64.buildinfo 8240932d5b76658c41b73a97c482d0e2228b05152bf684fe6549eb7ad6deb983 1260924 stacks_2.68+dfsg-2_amd64.deb Files: 208970bbcca550ed3cdbe9a49b6d20c1 30729564 debug optional stacks-dbgsym_2.68+dfsg-2_amd64.deb 179a24839b660ffe38cad703f9ef06a3 7005 science optional stacks_2.68+dfsg-2_amd64.buildinfo 8f216e6e28cfde0280493b830314fb67 1260924 science optional stacks_2.68+dfsg-2_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: stacks Binary: stacks stacks-dbgsym Architecture: amd64 Version: 2.68+dfsg-2 Checksums-Md5: 208970bbcca550ed3cdbe9a49b6d20c1 30729564 stacks-dbgsym_2.68+dfsg-2_amd64.deb 8f216e6e28cfde0280493b830314fb67 1260924 stacks_2.68+dfsg-2_amd64.deb Checksums-Sha1: 0034ea2ac9d077ded2fa300e3bfa03f93a942e94 30729564 stacks-dbgsym_2.68+dfsg-2_amd64.deb 55ce968b1a8e675a6faf2958ec9c42b494dab21f 1260924 stacks_2.68+dfsg-2_amd64.deb Checksums-Sha256: 446604838cb238bad81cc433275ef3250262c5e155cbbb5798206e593c415b77 30729564 stacks-dbgsym_2.68+dfsg-2_amd64.deb 8240932d5b76658c41b73a97c482d0e2228b05152bf684fe6549eb7ad6deb983 1260924 stacks_2.68+dfsg-2_amd64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Wed, 26 Feb 2025 05:39:03 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.72-3), automake (= 1:1.17-3), autopoint (= 0.23.1-1), autotools-dev (= 20220109.1), base-files (= 13.6), base-passwd (= 3.6.6), bash (= 5.2.37-1.1), binutils (= 2.44-2), binutils-aarch64-linux-gnu (= 2.44-2), binutils-common (= 2.44-2), bsdextrautils (= 2.40.4-5), bsdutils (= 1:2.40.4-5), build-essential (= 12.12), bzip2 (= 1.0.8-6), comerr-dev (= 2.1-1.47.2-1), coreutils (= 9.5-1+b1), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-17), cpp-14-aarch64-linux-gnu (= 14.2.0-17), cpp-aarch64-linux-gnu (= 4:14.2.0-1), dash (= 0.5.12-12), debconf (= 1.5.89), debhelper (= 13.24.1), debianutils (= 5.21), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-2), dpkg (= 1.22.15), dpkg-dev (= 1.22.15), dwz (= 0.15-1+b1), file (= 1:5.45-3+b1), findutils (= 4.10.0-3), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-17), g++-14-aarch64-linux-gnu (= 14.2.0-17), g++-aarch64-linux-gnu (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-17), gcc-14-aarch64-linux-gnu (= 14.2.0-17), gcc-14-base (= 14.2.0-17), gcc-aarch64-linux-gnu (= 4:14.2.0-1), gettext (= 0.23.1-1), gettext-base (= 0.23.1-1), grep (= 3.11-4+b1), groff-base (= 1.23.0-7), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), krb5-multidev (= 1.21.3-4), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-17), libatomic1 (= 14.2.0-17), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b1), libbam-dev (= 0.1.19+dfsg-6), libbinutils (= 2.44-2), libblkid1 (= 2.40.4-5), libbrotli-dev (= 1.1.0-2+b6), libbrotli1 (= 1.1.0-2+b6), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.40-7), libc-dev-bin (= 2.40-7), libc6 (= 2.40-7), libc6-dev (= 2.40-7), libcap-ng0 (= 0.8.5-4), libcap2 (= 1:2.73-4), libcc1-0 (= 14.2.0-17), libcom-err2 (= 1.47.2-1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-2), libctf0 (= 2.44-2), libcurl3t64-gnutls (= 8.12.1-3), libcurl4-gnutls-dev (= 8.12.1-3), libdb5.3t64 (= 5.3.28+dfsg2-9), libdebconfclient0 (= 0.277), libdebhelper-perl (= 13.24.1), libdeflate-dev (= 1.23-1+b1), libdeflate0 (= 1.23-1+b1), libdpkg-perl (= 1.22.15), libelf1t64 (= 0.192-4), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libffi8 (= 3.4.7-1), libfile-stripnondeterminism-perl (= 1.14.1-2), libgcc-14-dev (= 14.2.0-17), libgcc-s1 (= 14.2.0-17), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.9-2), libgnutls-openssl27t64 (= 3.8.9-2), libgnutls28-dev (= 3.8.9-2), libgnutls30t64 (= 3.8.9-2), libgomp1 (= 14.2.0-17), libgprofng0 (= 2.44-2), libgssapi-krb5-2 (= 1.21.3-4), libgssrpc4t64 (= 1.21.3-4), libhogweed6t64 (= 3.10.1-1), libhts-dev (= 1.21+ds-1), libhts3t64 (= 1.21+ds-1), libhtscodecs2 (= 1.6.1-2), libhwasan0 (= 14.2.0-17), libicu72 (= 72.1-6), libidn2-0 (= 2.3.7-2+b1), libidn2-dev (= 2.3.7-2+b1), libisl23 (= 0.27-1), libitm1 (= 14.2.0-17), libjansson4 (= 2.14-2+b3), libk5crypto3 (= 1.21.3-4), libkadm5clnt-mit12 (= 1.21.3-4), libkadm5srv-mit12 (= 1.21.3-4), libkdb5-10t64 (= 1.21.3-4), libkeyutils1 (= 1.6.3-4), libkrb5-3 (= 1.21.3-4), libkrb5-dev (= 1.21.3-4), libkrb5support0 (= 1.21.3-4), libldap-dev (= 2.6.9+dfsg-1), libldap2 (= 2.6.9+dfsg-1), liblsan0 (= 14.2.0-17), liblzma-dev (= 5.6.3-1+b1), liblzma5 (= 5.6.3-1+b1), libmagic-mgc (= 1:5.45-3+b1), libmagic1t64 (= 1:5.45-3+b1), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.40.4-5), libmpc3 (= 1.3.1-1+b3), libmpfr6 (= 4.2.1-1+b2), libncurses6 (= 6.5+20250216-1), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1), libnghttp2-dev (= 1.64.0-1), libnghttp3-9 (= 1.6.0-2), libnghttp3-dev (= 1.6.0-2), libngtcp2-16 (= 1.9.1-1), libngtcp2-crypto-gnutls-dev (= 1.9.1-1), libngtcp2-crypto-gnutls8 (= 1.9.1-1), libngtcp2-dev (= 1.9.1-1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam0g (= 1.7.0-3), libpcre2-8-0 (= 10.45-1), libperl5.40 (= 5.40.1-2), libpipeline1 (= 1.5.8-1), libpkgconf3 (= 1.8.1-4), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libquadmath0 (= 14.2.0-17), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-8+b1), libsasl2-modules-db (= 2.1.28+dfsg1-8+b1), libseccomp2 (= 2.5.5-2), libselinux1 (= 3.8-4), libsframe1 (= 2.44-2), libsmartcols1 (= 2.40.4-5), libsparsehash-dev (= 2.0.3-2), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.4.1-1), libssl3t64 (= 3.4.1-1), libstdc++-14-dev (= 14.2.0-17), libstdc++6 (= 14.2.0-17), libsystemd0 (= 257.3-1), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtinfo6 (= 6.5+20250216-1), libtool (= 2.5.4-3), libtsan2 (= 14.2.0-17), libubsan1 (= 14.2.0-17), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.3-1), libunbound8 (= 1.22.0-1+b1), libunistring5 (= 1.3-1), libuuid1 (= 2.40.4-5), libxml2 (= 2.12.7+dfsg+really2.9.14-0.2+b1), libzstd-dev (= 1.5.6+dfsg-2), libzstd1 (= 1.5.6+dfsg-2), linux-libc-dev (= 6.12.16-1), m4 (= 1.4.19-5), make (= 4.4.1-1), man-db (= 2.13.0-1), mawk (= 1.3.4.20250131-1), ncurses-base (= 6.5+20250216-1), ncurses-bin (= 6.5+20250216-1), nettle-dev (= 3.10.1-1), openssl-provider-legacy (= 3.4.1-1), patch (= 2.7.6-7+b1), perl (= 5.40.1-2), perl-base (= 5.40.1-2), perl-modules-5.40 (= 5.40.1-2), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1+b1), samtools (= 1.21-1), sed (= 4.9-2+b1), sensible-utils (= 0.0.24), sysvinit-utils (= 3.14-3), tar (= 1.35+dfsg-3.1), util-linux (= 2.40.4-5), xz-utils (= 5.6.3-1+b1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1739699671" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ stacks-dbgsym_2.68+dfsg-2_amd64.deb ----------------------------------- new Debian package, version 2.0. size 30729564 bytes: control archive=1100 bytes. 786 bytes, 12 lines control 1249 bytes, 12 lines md5sums Package: stacks-dbgsym Source: stacks Version: 2.68+dfsg-2 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 32143 Depends: stacks (= 2.68+dfsg-2) Section: debug Priority: optional Description: debug symbols for stacks Build-Ids: 2c5c1a7ee384ab90ca2f80a9e42af0922d4e7b2e 35922f389cf44b4389bdfd3beaa1ea5b175b8fc1 70a6a3bda1d9770172de858b59bdd84bf8dfa0d1 7965f078665fedb2889255dd2b888d2d4a96f5a8 99dc28eddad458661aa562dec18a68fa509809e2 aa525f6bc71e98d31c150f1b493911ba63b6482a b9cf5f19b2c2cb1066af618a391347315589e3a8 bb25b14fc1d673530d1dff4fbe3fcd2fc407aa59 c69d9ff35b2cbc58c778c85377ff0cc4fd661d38 c96ffee59869fc6d963e1fa69d8391e3e4fd4153 e1012198129292a8f1ed646104b52000d1f3cf40 drwxr-xr-x root/root 0 2025-02-16 09:54 ./ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/2c/ -rw-r--r-- root/root 2442816 2025-02-16 09:54 ./usr/lib/debug/.build-id/2c/5c1a7ee384ab90ca2f80a9e42af0922d4e7b2e.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/35/ -rw-r--r-- root/root 2058248 2025-02-16 09:54 ./usr/lib/debug/.build-id/35/922f389cf44b4389bdfd3beaa1ea5b175b8fc1.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/70/ -rw-r--r-- root/root 2233080 2025-02-16 09:54 ./usr/lib/debug/.build-id/70/a6a3bda1d9770172de858b59bdd84bf8dfa0d1.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/79/ -rw-r--r-- root/root 5242504 2025-02-16 09:54 ./usr/lib/debug/.build-id/79/65f078665fedb2889255dd2b888d2d4a96f5a8.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/99/ -rw-r--r-- root/root 2139560 2025-02-16 09:54 ./usr/lib/debug/.build-id/99/dc28eddad458661aa562dec18a68fa509809e2.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/aa/ -rw-r--r-- root/root 2726168 2025-02-16 09:54 ./usr/lib/debug/.build-id/aa/525f6bc71e98d31c150f1b493911ba63b6482a.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/b9/ -rw-r--r-- root/root 3146536 2025-02-16 09:54 ./usr/lib/debug/.build-id/b9/cf5f19b2c2cb1066af618a391347315589e3a8.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/bb/ -rw-r--r-- root/root 6006416 2025-02-16 09:54 ./usr/lib/debug/.build-id/bb/25b14fc1d673530d1dff4fbe3fcd2fc407aa59.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/c6/ -rw-r--r-- root/root 2788584 2025-02-16 09:54 ./usr/lib/debug/.build-id/c6/9d9ff35b2cbc58c778c85377ff0cc4fd661d38.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/c9/ -rw-r--r-- root/root 1039992 2025-02-16 09:54 ./usr/lib/debug/.build-id/c9/6ffee59869fc6d963e1fa69d8391e3e4fd4153.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.build-id/e1/ -rw-r--r-- root/root 1631504 2025-02-16 09:54 ./usr/lib/debug/.build-id/e1/012198129292a8f1ed646104b52000d1f3cf40.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/lib/debug/.dwz/x86_64-linux-gnu/ -rw-r--r-- root/root 1429544 2025-02-16 09:54 ./usr/lib/debug/.dwz/x86_64-linux-gnu/stacks.debug drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/share/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/share/doc/stacks-dbgsym -> stacks stacks_2.68+dfsg-2_amd64.deb ---------------------------- new Debian package, version 2.0. size 1260924 bytes: control archive=1608 bytes. 992 bytes, 20 lines control 1796 bytes, 25 lines md5sums Package: stacks Version: 2.68+dfsg-2 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 6162 Depends: libc6 (>= 2.38), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libhts3t64 (>= 1.17), libstdc++6 (>= 14), zlib1g (>= 1:1.2.6), samtools, libdbi-perl, bsdextrautils, python3 Recommends: libspreadsheet-writeexcel-perl, littler Suggests: gdb Provides: stacks-web Section: science Priority: optional Homepage: https://creskolab.uoregon.edu/stacks/ Description: pipeline for building loci from short-read DNA sequences Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. . Note that this package installs Stacks such that all commands must be run as: $ stacks drwxr-xr-x root/root 0 2025-02-16 09:54 ./ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/bin/ -rwxr-xr-x root/root 775 2024-08-31 09:15 ./usr/bin/stacks drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/libexec/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/ lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/clone_filter -> ../../stacks/bin/clone_filter lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/cstacks -> ../../stacks/bin/cstacks lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/denovo_map -> ../../stacks/bin/denovo_map lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/denovo_map.pl -> ../../stacks/bin/denovo_map.pl lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/gstacks -> ../../stacks/bin/gstacks lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/kmer_filter -> ../../stacks/bin/kmer_filter lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/phasedstacks -> ../../stacks/bin/phasedstacks lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/populations -> ../../stacks/bin/populations lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/process_radtags -> ../../stacks/bin/process_radtags lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/process_shortreads -> ../../stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/ref_map -> ../../stacks/bin/ref_map lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/ref_map.pl -> ../../stacks/bin/ref_map.pl lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/sstacks -> ../../stacks/bin/sstacks lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/stacks-count-reads-per-sample-per-locus -> ../../stacks/bin/stacks-count-reads-per-sample-per-locus lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/stacks-dist-extract -> ../../stacks/bin/stacks-dist-extract lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/stacks-gdb -> ../../stacks/bin/stacks-gdb lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/stacks-hist2d-loci-samples-coverage -> ../../stacks/bin/stacks-hist2d-loci-samples-coverage lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/stacks-integrate-alignments -> ../../stacks/bin/stacks-integrate-alignments lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/stacks-private-alleles -> ../../stacks/bin/stacks-private-alleles lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/stacks-samtools-tview -> ../../stacks/bin/stacks-samtools-tview lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/tsv2bam -> ../../stacks/bin/tsv2bam lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/debian-med/bin/ustacks -> ../../stacks/bin/ustacks drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/libexec/stacks/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/libexec/stacks/bin/ -rwxr-xr-x root/root 414408 2025-02-16 09:54 ./usr/libexec/stacks/bin/clone_filter -rwxr-xr-x root/root 503880 2025-02-16 09:54 ./usr/libexec/stacks/bin/cstacks lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/stacks/bin/denovo_map -> denovo_map.pl -rwxr-xr-x root/root 32933 2025-02-16 09:54 ./usr/libexec/stacks/bin/denovo_map.pl -rwxr-xr-x root/root 863960 2025-02-16 09:54 ./usr/libexec/stacks/bin/gstacks -rwxr-xr-x root/root 287336 2025-02-16 09:54 ./usr/libexec/stacks/bin/kmer_filter -rwxr-xr-x root/root 381288 2025-02-16 09:54 ./usr/libexec/stacks/bin/phasedstacks -rwxr-xr-x root/root 1187368 2025-02-16 09:54 ./usr/libexec/stacks/bin/populations -rwxr-xr-x root/root 589416 2025-02-16 09:54 ./usr/libexec/stacks/bin/process_radtags -rwxr-xr-x root/root 423464 2025-02-16 09:54 ./usr/libexec/stacks/bin/process_shortreads lrwxrwxrwx root/root 0 2025-02-16 09:54 ./usr/libexec/stacks/bin/ref_map -> ref_map.pl -rwxr-xr-x root/root 15395 2025-02-16 09:54 ./usr/libexec/stacks/bin/ref_map.pl -rwxr-xr-x root/root 462824 2025-02-16 09:54 ./usr/libexec/stacks/bin/sstacks -rwxr-xr-x root/root 1040 2025-02-16 09:54 ./usr/libexec/stacks/bin/stacks-count-reads-per-sample-per-locus -rwxr-xr-x root/root 7331 2025-02-16 09:54 ./usr/libexec/stacks/bin/stacks-dist-extract -rwxr-xr-x root/root 1244 2025-02-16 09:54 ./usr/libexec/stacks/bin/stacks-gdb -rwxr-xr-x root/root 1773 2025-02-16 09:54 ./usr/libexec/stacks/bin/stacks-hist2d-loci-samples-coverage -rwxr-xr-x root/root 22320 2025-02-16 09:54 ./usr/libexec/stacks/bin/stacks-integrate-alignments -rwxr-xr-x root/root 40422 2025-02-16 09:54 ./usr/libexec/stacks/bin/stacks-private-alleles -rwxr-xr-x root/root 3037 2025-02-16 09:54 ./usr/libexec/stacks/bin/stacks-samtools-tview -rwxr-xr-x root/root 482808 2025-02-16 09:54 ./usr/libexec/stacks/bin/tsv2bam -rwxr-xr-x root/root 500584 2025-02-16 09:54 ./usr/libexec/stacks/bin/ustacks drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/share/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-02-16 09:54 ./usr/share/doc/stacks/ -rw-r--r-- root/root 1451 2024-08-31 09:15 ./usr/share/doc/stacks/README.Debian -rw-r--r-- root/root 1728 2025-02-16 09:54 ./usr/share/doc/stacks/changelog.Debian.gz -rw-r--r-- root/root 32538 2024-08-23 15:56 ./usr/share/doc/stacks/changelog.gz -rw-r--r-- root/root 1730 2024-08-31 09:15 ./usr/share/doc/stacks/copyright lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: warning: root directory /<>/sbuild-build-depends-lintian-dummy has unusual owner or group 998:999 dpkg-deb: hint: you might need to pass --root-owner-group, see for further details dpkg-deb: warning: ignoring 1 warning about the control file(s) dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1371 B] Get:5 copy:/<>/apt_archive ./ Packages [1450 B] Fetched 3436 B in 0s (118 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common shared-mime-info t1utils ucf unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl rng-tools low-memory-monitor gnutls-bin krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libglib2.0-data xdg-user-dirs libgpg-error-l10n libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common liblist-someutils-xs-perl libfreezethaw-perl libgpm2 libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl psmisc linux-sysctl-defaults The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libbrotli1 libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libffi8 libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libgcrypt20 libglib2.0-0t64 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libncursesw6 libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libproc2-0 libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-charwidth-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-wrapi18n-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip procps readline-common sbuild-build-depends-lintian-dummy:amd64 shared-mime-info t1utils ucf unzip 0 upgraded, 173 newly installed, 0 to remove and 0 not upgraded. Need to get 22.3 MB of archives. After this operation, 92.0 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libncursesw6 arm64 6.5+20250216-1 [124 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-7 [62.4 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 procps arm64 2:4.0.4-7 [868 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.2-6 [69.4 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.4.1-1 [1390 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20241223 [164 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 libtext-charwidth-perl arm64 0.04-11+b4 [9652 B] Get:10 http://mirror.einval.org/debian unstable/main arm64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:11 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0050 [42.7 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libffi8 arm64 3.4.7-1 [21.2 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.83.4-1 [1422 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b2 [756 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b6 [297 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libidn2-0 arm64 2.3.7-2+b1 [127 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.9-2 [1374 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libkrb5support0 arm64 1.21.3-4 [32.2 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-1 [23.9 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libk5crypto3 arm64 1.21.3-4 [81.5 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get:24 http://mirror.einval.org/debian unstable/main arm64 libkrb5-3 arm64 1.21.3-4 [308 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.21.3-4 [127 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8+b1 [20.3 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8+b1 [55.7 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libldap2 arm64 2.6.9+dfsg-1 [179 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1 [71.3 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libnghttp3-9 arm64 1.6.0-2 [60.5 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-16 arm64 1.9.1-1 [109 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.9.1-1 [17.3 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b5 [56.8 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.12.1-3 [336 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libstemmer0d arm64 2.2.0-4+b2 [111 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libxmlb2 arm64 0.3.21-1 [59.1 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-2 [49.2 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libappstream5 arm64 1.0.4-1 [209 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 appstream arm64 1.0.4-1 [521 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.67-1 [32.6 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libgpg-error0 arm64 1.51-3 [78.5 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libassuan9 arm64 3.0.1-2 [58.1 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libgcrypt20 arm64 1.11.0-7 [742 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-6 [159 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.2.46-1+b1 [115 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.1-1 [852 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.2.46-1+b1 [481 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.17.0-1 [3055 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.41 [64.2 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b2 [10.6 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-1 [12.1 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-1+b1 [16.3 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b4 [22.3 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:61 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.64-1+b1 [43.9 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.66-1 [115 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.30-1 [105 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.83-1+b2 [97.5 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.67-1 [217 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:70 http://mirror.einval.org/debian unstable/main arm64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b5 [34.9 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.47-1+b1 [13.7 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3+b1 [23.7 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:80 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.39-1 [128 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-1+b4 [31.2 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b4 [97.7 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.84-1+b1 [24.1 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b4 [28.2 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 libnumber-compare-perl all 0.03-3 [6332 B] Get:100 http://mirror.einval.org/debian unstable/main arm64 libtext-glob-perl all 0.11-3 [7676 B] Get:101 http://mirror.einval.org/debian unstable/main arm64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:109 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 7.00-2 [79.8 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.12-1 [32.3 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get:117 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.94-3 [323 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.089-1 [223 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.77-1 [183 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.026-1 [11.7 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:127 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:128 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:129 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:130 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:131 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.15-2 [37.8 kB] Get:132 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b1 [49.6 kB] Get:133 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2.1 [33.1 kB] Get:134 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:135 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:136 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:137 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:138 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:139 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:140 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.5.11-1+b1 [141 kB] Get:141 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:142 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-3+b3 [11.2 kB] Get:143 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.28-1 [12.1 kB] Get:144 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:145 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.146-1 [56.2 kB] Get:146 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b4 [17.4 kB] Get:147 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1+b3 [11.4 kB] Get:148 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.636-1+b3 [41.7 kB] Get:149 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:150 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.004+ds-1+b3 [96.7 kB] Get:151 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.004+ds-1+b3 [99.0 kB] Get:152 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:153 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.48-2 [64.3 kB] Get:154 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.30-1+b1 [27.1 kB] Get:155 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b4 [24.5 kB] Get:156 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b4 [8772 B] Get:157 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.18-1 [13.2 kB] Get:158 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-2+b1 [172 kB] Get:159 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:160 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.44-2+b4 [72.0 kB] Get:161 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.62-2+b3 [20.1 kB] Get:162 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.19-1 [114 kB] Get:163 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:164 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:165 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get:166 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-5+b1 [300 kB] Get:167 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.903.0+ds-1 [33.7 kB] Get:168 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.12-2 [60.1 kB] Get:169 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2+b1 [82.3 kB] Get:170 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.2-1+b1 [71.3 kB] Get:171 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4+b1 [57.6 kB] Get:172 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-28+b1 [158 kB] Get:173 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.121.1+nmu1 [1059 kB] Preconfiguring packages ... Fetched 22.3 MB in 1s (15.7 MB/s) Selecting previously unselected package netbase. (Reading database ... 19817 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package libncursesw6:arm64. Preparing to unpack .../001-libncursesw6_6.5+20250216-1_arm64.deb ... Unpacking libncursesw6:arm64 (6.5+20250216-1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-7_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-7) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-7_arm64.deb ... Unpacking procps (2:4.0.4-7) ... Selecting previously unselected package readline-common. Preparing to unpack .../004-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package openssl. Preparing to unpack .../005-openssl_3.4.1-1_arm64.deb ... 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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-6) ... Selecting previously unselected package gpgconf. Preparing to unpack .../045-gpgconf_2.2.46-1+b1_arm64.deb ... Unpacking gpgconf (2.2.46-1+b1) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../046-libsqlite3-0_3.46.1-1_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.46.1-1) ... Selecting previously unselected package gpg. 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Preparing to unpack .../172-sbuild-build-depends-lintian-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.41) ... Setting up liblz1:arm64 (1.15-2) ... Setting up libberkeleydb-perl:arm64 (0.66-1) ... Setting up plzip (1.12-2) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libtext-charwidth-perl:arm64 (0.04-11+b4) ... Setting up libkeyutils1:arm64 (1.6.3-4) ... Setting up libunicode-utf8-perl (0.62-2+b3) ... Setting up libmouse-perl:arm64 (2.5.11-1+b1) ... Setting up libgpg-error0:arm64 (1.51-3) ... Setting up libdata-messagepack-perl (1.02-1+b4) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-1) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:arm64 (0.47-1+b1) ... Setting up libyaml-0-2:arm64 (0.2.5-2) ... Setting up libsub-identify-perl (0.14-3+b3) ... Setting up libcpanel-json-xs-perl:arm64 (4.39-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdevel-size-perl (0.84-1+b1) ... Setting up unzip (6.0-28+b1) ... Setting up libbrotli1:arm64 (1.1.0-2+b6) ... Setting up libsqlite3-0:arm64 (3.46.1-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.903.0+ds-1) ... Setting up libio-interactive-perl (1.026-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libnghttp2-14:arm64 (1.64.0-1) ... Setting up perl-openssl-defaults:arm64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libgcrypt20:arm64 (1.11.0-7) ... Setting up liblzo2-2:arm64 (2.10-3+b1) ... Setting up libtime-moment-perl (0.44-2+b4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libidn2-0:arm64 (2.3.7-2+b1) ... Setting up libcom-err2:arm64 (1.47.2-1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1+b3) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up libkrb5support0:arm64 (1.21.3-4) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8+b1) ... Setting up patchutils (0.4.2-1+b1) ... Setting up libjson-maybexs-perl (1.004008-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b4) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libfile-find-rule-perl (0.34-3) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-4) ... Setting up libperlio-utf8-strict-perl (0.010-1+b3) ... Setting up t1utils (1.41-4+b1) ... Setting up diffstat (1.67-1) ... Setting up libproc2-0:arm64 (2:4.0.4-7) ... Setting up libvariable-magic-perl (0.64-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:arm64 (0.22-3+b2) ... Setting up libncursesw6:arm64 (6.5+20250216-1) ... Setting up libk5crypto3:arm64 (1.21.3-4) ... Setting up libparams-util-perl (1.102-3+b1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8+b1) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:arm64 (3.5.9-2+b1) ... Setting up libnghttp3-9:arm64 (1.6.0-2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.50-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libsub-name-perl:arm64 (0.28-1) ... Setting up libffi8:arm64 (3.4.7-1) ... Setting up libdata-validate-domain-perl (0.15-1) ... Setting up libproc-processtable-perl:arm64 (0.636-1+b3) ... Setting up libpath-tiny-perl (0.146-1) ... Setting up lzop (1.04-2+b1) ... Setting up libassuan9:arm64 (3.0.1-2) ... Setting up procps (2:4.0.4-7) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libtasn1-6:arm64 (4.20.0-2) ... Setting up libipc-run3-perl (0.049-1) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libfile-sharedir-perl (1.118-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:arm64 (1.9.1-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b5) ... Setting up libkrb5-3:arm64 (1.21.3-4) ... Setting up libstemmer0d:arm64 (2.2.0-4+b2) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libterm-readkey-perl (2.38-2+b4) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.4.1-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b4) ... Setting up libperlio-gzip-perl (0.20-1+b4) ... Setting up readline-common (8.2-6) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b3) ... Setting up libmarkdown2:arm64 (2.2.7-2.1) ... Setting up libldap2:arm64 (2.6.9+dfsg-1) ... Setting up liburi-perl (5.30-1) ... Setting up iso-codes (4.17.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b4) ... Setting up libnet-ssleay-perl:arm64 (1.94-3) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.18-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.009-1+b1) ... Setting up ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 152 added, 0 removed; done. Setting up libglib2.0-0t64:arm64 (2.83.4-1) ... No schema files found: doing nothing. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.48-2) ... Setting up shared-mime-info (2.4-5+b2) ... Setting up libp11-kit0:arm64 (0.25.5-3) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-4) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up ucf (3.0050) ... Setting up libreadline8t64:arm64 (8.2-6) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.30-1+b1) ... Setting up libhtml-parser-perl:arm64 (3.83-1+b2) ... Setting up gpgconf (2.2.46-1+b1) ... Setting up libio-socket-ssl-perl (2.089-1) ... Setting up gpg (2.2.46-1+b1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.00-2) ... Setting up libhtml-form-perl (6.12-1) ... Setting up libgnutls30t64:arm64 (3.8.9-2) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libxmlb2:arm64 (0.3.21-1) ... Setting up libparams-classify-perl:arm64 (0.015-2+b4) ... Setting up libcgi-pm-perl (4.67-1) ... Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libmodule-runtime-perl (0.016-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-5+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.9.1-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up libcurl3t64-gnutls:arm64 (8.12.1-3) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libappstream5:arm64 (1.0.4-1) ... Setting up appstream (1.0.4-1) ... ✔ Metadata cache was updated successfully. Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.19-1) ... Setting up lintian (2.121.1+nmu1) ... Setting up sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.40-7) ... Processing triggers for man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20241223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 1176 Distribution: unstable Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 55 Job: stacks_2.68+dfsg-2 Lintian: pass Machine Architecture: arm64 Package: stacks Package-Time: 1266 Source-Version: 2.68+dfsg-2 Space: n/a Status: successful Version: 2.68+dfsg-2 -------------------------------------------------------------------------------- Finished at 2025-02-26T05:39:05Z Build needed 00:21:06, no disk space