sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | staden-io-lib 1.14.11-6 (armel) Fri, 22 Mar 2019 10:32:18 +0000 | +==============================================================================+ Package: staden-io-lib Version: 1.14.11-6 Source Version: 1.14.11-6 Distribution: unstable Machine Architecture: amd64 Host Architecture: armel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-dd3cfc2d-454a-4f40-9b3c-a3f0ae0d1d0b' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [242 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-22-0813.34.pdiff [783 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-22-0813.34.pdiff [4437 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-03-22-0813.34.pdiff [783 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-03-22-0813.34.pdiff [4437 B] Get:6 http://debian.oregonstate.edu/debian unstable/main armel Packages [7989 kB] Fetched 8292 kB in 2s (5084 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'staden-io-lib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/staden-io-lib.git Please use: git clone https://salsa.debian.org/med-team/staden-io-lib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 3408 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.11-6 (dsc) [2453 B] Get:2 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.11-6 (tar) [3392 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.11-6 (diff) [14.0 kB] Fetched 3408 kB in 0s (76.1 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/staden-io-lib-NmwEF5/staden-io-lib-1.14.11' with '<>' I: NOTICE: Log filtering will replace 'build/staden-io-lib-NmwEF5' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-armel:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-qNIpTa/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-qNIpTa/apt_archive ./ InRelease Get:2 copy:/<>/resolver-qNIpTa/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-qNIpTa/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-qNIpTa/apt_archive ./ Sources [359 B] Get:5 copy:/<>/resolver-qNIpTa/apt_archive ./ Packages [450 B] Fetched 1766 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-arm-linux-gnueabi cpp-8-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel dpkg-cross file g++-8-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-8-arm-linux-gnueabi gcc-8-arm-linux-gnueabi-base gcc-8-cross-base gcc-arm-linux-gnueabi libasan5-armel-cross libatomic1-armel-cross libc6-armel-cross libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armel-cross libgcc1-armel-cross libgomp1-armel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armel-cross libstdc++6-armel-cross libubsan1-armel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armel-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch gcc-8-doc libstdc++6-8-dbg-armel-cross libgcc1-dbg-armel-cross libgomp1-dbg-armel-cross libitm1-dbg-armel-cross libatomic1-dbg-armel-cross libasan5-dbg-armel-cross liblsan0-dbg-armel-cross libtsan0-dbg-armel-cross libubsan1-dbg-armel-cross libmpx2-dbg-armel-cross libquadmath0-dbg-armel-cross manpages-dev autoconf automake libtool flex bison gdb-arm-linux-gnueabi gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-arm-linux-gnueabi cpp-8-arm-linux-gnueabi cpp-arm-linux-gnueabi cross-config crossbuild-essential-armel dpkg-cross file g++-8-arm-linux-gnueabi g++-arm-linux-gnueabi gcc-8-arm-linux-gnueabi gcc-8-arm-linux-gnueabi-base gcc-8-cross-base gcc-arm-linux-gnueabi libasan5-armel-cross libatomic1-armel-cross libc6-armel-cross libc6-dev-armel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-armel-cross libgcc1-armel-cross libgomp1-armel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-armel-cross libstdc++6-armel-cross libubsan1-armel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-armel-cross sbuild-build-depends-core-dummy:armel sensible-utils ucf 0 upgraded, 44 newly installed, 0 to remove and 0 not upgraded. Need to get 41.8 MB of archives. After this operation, 154 MB of additional disk space will be used. Get:1 copy:/<>/resolver-qNIpTa/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [872 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-arm-linux-gnueabi amd64 2.31.1-16 [2832 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabi-base amd64 8.3.0-2cross1 [190 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-arm-linux-gnueabi amd64 8.3.0-2cross1 [6552 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-arm-linux-gnueabi amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-2 [39.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-2cross1 [185 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-armel-cross all 2.28-7cross1 [1189 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-armel-cross all 1:8.3.0-2cross1 [38.5 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-armel-cross all 8.3.0-2cross1 [65.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-armel-cross all 8.3.0-2cross1 [8820 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-armel-cross all 8.3.0-2cross1 [288 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libasan5-armel-cross all 8.3.0-2cross1 [311 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-armel-cross all 8.3.0-2cross1 [102 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-armel-cross all 8.3.0-2cross1 [601 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-arm-linux-gnueabi amd64 8.3.0-2cross1 [6975 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-arm-linux-gnueabi amd64 4:8.3.0-1 [1460 B] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-armel-cross all 4.19.20-1cross1 [1212 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-armel-cross all 2.28-7cross1 [2183 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-armel-cross all 8.3.0-2cross1 [1543 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-arm-linux-gnueabi amd64 8.3.0-2cross1 [7131 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 g++-arm-linux-gnueabi amd64 4:8.3.0-1 [1176 B] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-2 [38.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-2 [49.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-armel all 12.6 [6568 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 41.8 MB in 1s (75.5 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11931 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Setting up sensible-utils (0.0.12) ... Setting up libc6-dev-armel-cross (2.28-7cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgomp1-armel-cross (8.3.0-2cross1) ... Setting up libatomic1-armel-cross (8.3.0-2cross1) ... Setting up libgcc1-armel-cross (1:8.3.0-2cross1) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++6-armel-cross (8.3.0-2cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan5-armel-cross (8.3.0-2cross1) ... Setting up libubsan1-armel-cross (8.3.0-2cross1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-8-dev-armel-cross (8.3.0-2cross1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up gcc-8-arm-linux-gnueabi (8.3.0-2cross1) ... Setting up libstdc++-8-dev-armel-cross (8.3.0-2cross1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up gcc-arm-linux-gnueabi (4:8.3.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-2) ... Setting up g++-8-arm-linux-gnueabi (8.3.0-2cross1) ... Setting up g++-arm-linux-gnueabi (4:8.3.0-1) ... Setting up dpkg-cross (2.6.15-2) ... Setting up crossbuild-essential-armel (12.6) ... Setting up sbuild-build-depends-core-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (armel included in any all) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-qNIpTa/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-qNIpTa/apt_archive ./ InRelease Get:2 copy:/<>/resolver-qNIpTa/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-qNIpTa/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-qNIpTa/apt_archive ./ Sources [481 B] Get:5 copy:/<>/resolver-qNIpTa/apt_archive ./ Packages [569 B] Fetched 2013 B in 0s (0 B/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:armel 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 840 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-qNIpTa/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [840 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 840 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:armel. (Reading database ... 14976 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-essential-dummy:armel (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:armel (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), zlib1g-dev, libcurl4-gnutls-dev | libcurl4-nss-dev, d-shlibs Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), zlib1g-dev, libcurl4-gnutls-dev, d-shlibs dpkg-deb: building package 'sbuild-build-depends-staden-io-lib-dummy' in '/<>/resolver-qNIpTa/apt_archive/sbuild-build-depends-staden-io-lib-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-staden-io-lib-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-qNIpTa/apt_archive ./ InRelease Get:2 copy:/<>/resolver-qNIpTa/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-qNIpTa/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-qNIpTa/apt_archive ./ Sources [665 B] Get:5 copy:/<>/resolver-qNIpTa/apt_archive ./ Packages [742 B] Fetched 2370 B in 0s (0 B/s) Reading package lists... Reading package lists... Install staden-io-lib build dependencies (apt-based resolver) ------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libatomic1:armel libbsd0 libc6:armel libc6-dev:armel libcom-err2:armel libcroco3 libcurl3-gnutls:armel libcurl4-gnutls-dev:armel libdb5.3:armel libelf1 libffi6:armel libfile-stripnondeterminism-perl libgcc-8-dev:armel libgcc1:armel libgcrypt20:armel libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgpg-error0:armel libgssapi-krb5-2:armel libhogweed4:armel libidn2-0:armel libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel libldap-2.4-2:armel libldap-common libncurses6 libnettle6:armel libnghttp2-14:armel libp11-kit0:armel libpipeline1 libpsl5:armel librtmp1:armel libsasl2-2:armel libsasl2-modules-db:armel libsigsegv2 libssh2-1:armel libssl1.1:armel libstdc++-8-dev:armel libstdc++6:armel libtasn1-6:armel libtool libubsan1:armel libuchardet0 libunistring2:armel linux-libc-dev:armel m4 man-db po-debconf zlib1g:armel zlib1g-dev:armel Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:armel libc-l10n:armel locales:armel manpages-dev:armel libcurl4-doc:armel libgnutls28-dev:armel libidn11-dev:armel libkrb5-dev:armel libldap2-dev:armel librtmp-dev:armel libssh2-1-dev:armel pkg-config:armel rng-tools:armel gnutls-bin:armel krb5-doc:armel krb5-user:armel libstdc++-8-doc:armel libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx ca-certificates:armel libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:armel krb5-locales:armel libgpm2 publicsuffix:armel libsasl2-modules:armel libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:armel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan5:armel libatomic1:armel libbsd0 libc6:armel libc6-dev:armel libcom-err2:armel libcroco3 libcurl3-gnutls:armel libcurl4-gnutls-dev:armel libdb5.3:armel libelf1 libffi6:armel libfile-stripnondeterminism-perl libgcc-8-dev:armel libgcc1:armel libgcrypt20:armel libglib2.0-0 libgmp10:armel libgnutls30:armel libgomp1:armel libgpg-error0:armel libgssapi-krb5-2:armel libhogweed4:armel libidn2-0:armel libk5crypto3:armel libkeyutils1:armel libkrb5-3:armel libkrb5support0:armel libldap-2.4-2:armel libldap-common libncurses6 libnettle6:armel libnghttp2-14:armel libp11-kit0:armel libpipeline1 libpsl5:armel librtmp1:armel libsasl2-2:armel libsasl2-modules-db:armel libsigsegv2 libssh2-1:armel libssl1.1:armel libstdc++-8-dev:armel libstdc++6:armel libtasn1-6:armel libtool libubsan1:armel libuchardet0 libunistring2:armel linux-libc-dev:armel m4 man-db po-debconf sbuild-build-depends-staden-io-lib-dummy:armel zlib1g:armel zlib1g-dev:armel 0 upgraded, 72 newly installed, 0 to remove and 0 not upgraded. Need to get 25.8 MB of archives. After this operation, 101 MB of additional disk space will be used. Get:1 copy:/<>/resolver-qNIpTa/apt_archive ./ sbuild-build-depends-staden-io-lib-dummy 0.invalid.0 [900 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.84 [17.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1 [160 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main armel gcc-8-base armel 8.3.0-3 [190 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main armel libgcc1 armel 1:8.3.0-3 [38.4 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main armel libc6 armel 2.28-8 [2395 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main armel libstdc++6 armel 8.3.0-3 [325 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main armel libasan5 armel 8.3.0-3 [317 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main armel libatomic1 armel 8.3.0-3 [8960 B] Get:36 http://debian.oregonstate.edu/debian unstable/main armel linux-libc-dev armel 4.19.28-2 [1140 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main armel libc6-dev armel 2.28-8 [2184 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main armel libcom-err2 armel 1.45.0-1 [68.3 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main armel libgmp10 armel 2:6.1.2+dfsg-4 [197 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main armel libnettle6 armel 3.4.1-1 [224 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main armel libhogweed4 armel 3.4.1-1 [129 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main armel libunistring2 armel 0.9.10-1 [354 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main armel libidn2-0 armel 2.0.5-1 [73.9 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main armel libffi6 armel 3.2.1-9 [18.7 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main armel libp11-kit0 armel 0.23.15-2 [298 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main armel libtasn1-6 armel 4.13-3 [46.5 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main armel libgnutls30 armel 3.6.6-3 [1039 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main armel libkeyutils1 armel 1.6-6 [14.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main armel libkrb5support0 armel 1.17-2 [62.1 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main armel libk5crypto3 armel 1.17-2 [118 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main armel libssl1.1 armel 1.1.1b-1 [1264 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main armel libkrb5-3 armel 1.17-2 [321 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main armel libgssapi-krb5-2 armel 1.17-2 [135 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main armel libdb5.3 armel 5.3.28+dfsg1-0.6 [572 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-modules-db armel 2.1.27+dfsg-1 [67.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main armel libsasl2-2 armel 2.1.27+dfsg-1 [98.4 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.47+dfsg-3 [89.4 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main armel libldap-2.4-2 armel 2.4.47+dfsg-3 [200 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main armel libnghttp2-14 armel 1.37.0-1 [72.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main armel libpsl5 armel 0.20.2-2 [52.5 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main armel zlib1g armel 1:1.2.11.dfsg-1 [86.5 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main armel librtmp1 armel 2.4+20151223.gitfa8646d.1-2 [54.8 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main armel libgpg-error0 armel 1.35-1 [62.0 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main armel libgcrypt20 armel 1.8.4-5 [482 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main armel libssh2-1 armel 1.8.0-2 [126 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main armel libcurl3-gnutls armel 7.64.0-2 [292 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main armel libcurl4-gnutls-dev armel 7.64.0-2 [386 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main armel libgomp1 armel 8.3.0-3 [67.5 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main armel libubsan1 armel 8.3.0-3 [103 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main armel libgcc-8-dev armel 8.3.0-3 [600 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main armel libstdc++-8-dev armel 8.3.0-3 [1571 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main armel zlib1g-dev armel 1:1.2.11.dfsg-1 [206 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.8 MB in 0s (69.2 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 14976 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../13-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../14-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../15-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../16-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../17-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../18-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../19-libelf1_0.176-1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1) ... Selecting previously unselected package dwz. Preparing to unpack .../20-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../21-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../22-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../23-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../24-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../25-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../26-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../27-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package gcc-8-base:armel. Preparing to unpack .../28-gcc-8-base_8.3.0-3_armel.deb ... Unpacking gcc-8-base:armel (8.3.0-3) ... Selecting previously unselected package libgcc1:armel. Preparing to unpack .../29-libgcc1_1%3a8.3.0-3_armel.deb ... Unpacking libgcc1:armel (1:8.3.0-3) ... Selecting previously unselected package libc6:armel. Preparing to unpack .../30-libc6_2.28-8_armel.deb ... Unpacking libc6:armel (2.28-8) ... Selecting previously unselected package libstdc++6:armel. Preparing to unpack .../31-libstdc++6_8.3.0-3_armel.deb ... Unpacking libstdc++6:armel (8.3.0-3) ... Selecting previously unselected package libasan5:armel. Preparing to unpack .../32-libasan5_8.3.0-3_armel.deb ... Unpacking libasan5:armel (8.3.0-3) ... Selecting previously unselected package libatomic1:armel. Preparing to unpack .../33-libatomic1_8.3.0-3_armel.deb ... Unpacking libatomic1:armel (8.3.0-3) ... Selecting previously unselected package linux-libc-dev:armel. Preparing to unpack .../34-linux-libc-dev_4.19.28-2_armel.deb ... Unpacking linux-libc-dev:armel (4.19.28-2) ... Selecting previously unselected package libc6-dev:armel. Preparing to unpack .../35-libc6-dev_2.28-8_armel.deb ... Unpacking libc6-dev:armel (2.28-8) ... Selecting previously unselected package libcom-err2:armel. Preparing to unpack .../36-libcom-err2_1.45.0-1_armel.deb ... Unpacking libcom-err2:armel (1.45.0-1) ... Selecting previously unselected package libgmp10:armel. Preparing to unpack .../37-libgmp10_2%3a6.1.2+dfsg-4_armel.deb ... Unpacking libgmp10:armel (2:6.1.2+dfsg-4) ... Selecting previously unselected package libnettle6:armel. Preparing to unpack .../38-libnettle6_3.4.1-1_armel.deb ... Unpacking libnettle6:armel (3.4.1-1) ... Selecting previously unselected package libhogweed4:armel. Preparing to unpack .../39-libhogweed4_3.4.1-1_armel.deb ... Unpacking libhogweed4:armel (3.4.1-1) ... Selecting previously unselected package libunistring2:armel. Preparing to unpack .../40-libunistring2_0.9.10-1_armel.deb ... Unpacking libunistring2:armel (0.9.10-1) ... Selecting previously unselected package libidn2-0:armel. Preparing to unpack .../41-libidn2-0_2.0.5-1_armel.deb ... Unpacking libidn2-0:armel (2.0.5-1) ... Selecting previously unselected package libffi6:armel. Preparing to unpack .../42-libffi6_3.2.1-9_armel.deb ... Unpacking libffi6:armel (3.2.1-9) ... Selecting previously unselected package libp11-kit0:armel. Preparing to unpack .../43-libp11-kit0_0.23.15-2_armel.deb ... Unpacking libp11-kit0:armel (0.23.15-2) ... Selecting previously unselected package libtasn1-6:armel. Preparing to unpack .../44-libtasn1-6_4.13-3_armel.deb ... Unpacking libtasn1-6:armel (4.13-3) ... Selecting previously unselected package libgnutls30:armel. Preparing to unpack .../45-libgnutls30_3.6.6-3_armel.deb ... Unpacking libgnutls30:armel (3.6.6-3) ... Selecting previously unselected package libkeyutils1:armel. Preparing to unpack .../46-libkeyutils1_1.6-6_armel.deb ... Unpacking libkeyutils1:armel (1.6-6) ... Selecting previously unselected package libkrb5support0:armel. Preparing to unpack .../47-libkrb5support0_1.17-2_armel.deb ... Unpacking libkrb5support0:armel (1.17-2) ... Selecting previously unselected package libk5crypto3:armel. Preparing to unpack .../48-libk5crypto3_1.17-2_armel.deb ... Unpacking libk5crypto3:armel (1.17-2) ... Selecting previously unselected package libssl1.1:armel. Preparing to unpack .../49-libssl1.1_1.1.1b-1_armel.deb ... 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Selecting previously unselected package libgpg-error0:armel. Preparing to unpack .../61-libgpg-error0_1.35-1_armel.deb ... Unpacking libgpg-error0:armel (1.35-1) ... Selecting previously unselected package libgcrypt20:armel. Preparing to unpack .../62-libgcrypt20_1.8.4-5_armel.deb ... Unpacking libgcrypt20:armel (1.8.4-5) ... Selecting previously unselected package libssh2-1:armel. Preparing to unpack .../63-libssh2-1_1.8.0-2_armel.deb ... Unpacking libssh2-1:armel (1.8.0-2) ... Selecting previously unselected package libcurl3-gnutls:armel. Preparing to unpack .../64-libcurl3-gnutls_7.64.0-2_armel.deb ... Unpacking libcurl3-gnutls:armel (7.64.0-2) ... Selecting previously unselected package libcurl4-gnutls-dev:armel. Preparing to unpack .../65-libcurl4-gnutls-dev_7.64.0-2_armel.deb ... Unpacking libcurl4-gnutls-dev:armel (7.64.0-2) ... Selecting previously unselected package libgomp1:armel. Preparing to unpack .../66-libgomp1_8.3.0-3_armel.deb ... Unpacking libgomp1:armel (8.3.0-3) ... Selecting previously unselected package libubsan1:armel. Preparing to unpack .../67-libubsan1_8.3.0-3_armel.deb ... Unpacking libubsan1:armel (8.3.0-3) ... Selecting previously unselected package libgcc-8-dev:armel. Preparing to unpack .../68-libgcc-8-dev_8.3.0-3_armel.deb ... Unpacking libgcc-8-dev:armel (8.3.0-3) ... Selecting previously unselected package libstdc++-8-dev:armel. Preparing to unpack .../69-libstdc++-8-dev_8.3.0-3_armel.deb ... Unpacking libstdc++-8-dev:armel (8.3.0-3) ... Selecting previously unselected package zlib1g-dev:armel. Preparing to unpack .../70-zlib1g-dev_1%3a1.2.11.dfsg-1_armel.deb ... Unpacking zlib1g-dev:armel (1:1.2.11.dfsg-1) ... Selecting previously unselected package sbuild-build-depends-staden-io-lib-dummy:armel. Preparing to unpack .../71-sbuild-build-depends-staden-io-lib-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-staden-io-lib-dummy:armel (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:armel (4.19.28-2) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libldap-common (2.4.47+dfsg-3) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:armel (8.3.0-3) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up d-shlibs (0.84) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:armel (2.28-8) ... Setting up libtasn1-6:armel (4.13-3) ... Setting up libc6-dev:armel (2.28-8) ... Setting up libdb5.3:armel (5.3.28+dfsg1-0.6) ... Setting up libkeyutils1:armel (1.6-6) ... Setting up libgpg-error0:armel (1.35-1) ... Setting up libgcc1:armel (1:8.3.0-3) ... Setting up libssl1.1:armel (1.1.1b-1) ... Setting up libnghttp2-14:armel (1.37.0-1) ... Setting up libunistring2:armel (0.9.10-1) ... Setting up libgcrypt20:armel (1.8.4-5) ... Setting up zlib1g:armel (1:1.2.11.dfsg-1) ... Setting up libffi6:armel (3.2.1-9) ... Setting up libidn2-0:armel (2.0.5-1) ... Setting up libcom-err2:armel (1.45.0-1) ... Setting up libgomp1:armel (8.3.0-3) ... Setting up libkrb5support0:armel (1.17-2) ... Setting up libsasl2-modules-db:armel (2.1.27+dfsg-1) ... Setting up dh-autoreconf (19) ... Setting up libgmp10:armel (2:6.1.2+dfsg-4) ... Setting up libp11-kit0:armel (0.23.15-2) ... Setting up libatomic1:armel (8.3.0-3) ... Setting up libk5crypto3:armel (1.17-2) ... Setting up libnettle6:armel (3.4.1-1) ... Setting up libsasl2-2:armel (2.1.27+dfsg-1) ... Setting up zlib1g-dev:armel (1:1.2.11.dfsg-1) ... Setting up libssh2-1:armel (1.8.0-2) ... Setting up libkrb5-3:armel (1.17-2) ... Setting up libstdc++6:armel (8.3.0-3) ... Setting up libpsl5:armel (0.20.2-2) ... Setting up libhogweed4:armel (3.4.1-1) ... Setting up debhelper (12.1.1) ... Setting up libasan5:armel (8.3.0-3) ... Setting up libgnutls30:armel (3.6.6-3) ... Setting up librtmp1:armel (2.4+20151223.gitfa8646d.1-2) ... Setting up libgssapi-krb5-2:armel (1.17-2) ... Setting up libubsan1:armel (8.3.0-3) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libldap-2.4-2:armel (2.4.47+dfsg-3) ... Setting up libcurl3-gnutls:armel (7.64.0-2) ... Setting up libcurl4-gnutls-dev:armel (7.64.0-2) ... Setting up libgcc-8-dev:armel (8.3.0-3) ... Setting up libstdc++-8-dev:armel (8.3.0-3) ... Setting up sbuild-build-depends-staden-io-lib-dummy:armel (0.invalid.0) ... Processing triggers for libc-bin (2.28-8) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.5 g++-8_8.3.0-3 gcc-8_8.3.0-3 libc6-dev_2.28-8 libstdc++-8-dev_8.3.0-3 libstdc++-8-dev-armel-cross_8.3.0-2cross1 libstdc++6_8.3.0-3 libstdc++6-armel-cross_8.3.0-2cross1 linux-libc-dev_4.19.28-2 Package versions: adduser_3.118 apt_1.8.0 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1 base-passwd_3.5.46 bash_5.0-2 binutils_2.31.1-16 binutils-arm-linux-gnueabi_2.31.1-16 binutils-common_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-3 cpp-8-arm-linux-gnueabi_8.3.0-2cross1 cpp-arm-linux-gnueabi_4:8.3.0-1 cross-config_2.6.15-2 crossbuild-essential-armel_12.6 d-shlibs_0.84 dash_0.5.10.2-5 debconf_1.5.71 debhelper_12.1.1 debian-archive-keyring_2018.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-2 dpkg_1.19.5 dpkg-cross_2.6.15-2 dpkg-dev_1.19.5 dwz_0.12-3 e2fsprogs_1.45.0-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-3 g++-8-arm-linux-gnueabi_8.3.0-2cross1 g++-arm-linux-gnueabi_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-3 gcc-8-arm-linux-gnueabi_8.3.0-2cross1 gcc-8-arm-linux-gnueabi-base_8.3.0-2cross1 gcc-8-base_8.3.0-3 gcc-8-cross-base_8.3.0-2cross1 gcc-arm-linux-gnueabi_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-1 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.0 libarchive-zip-perl_1.64-1 libasan5_8.3.0-3 libasan5-armel-cross_8.3.0-2cross1 libatomic1_8.3.0-3 libatomic1-armel-cross_8.3.0-2cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-8 libc-dev-bin_2.28-8 libc6_2.28-8 libc6-armel-cross_2.28-7cross1 libc6-dev_2.28-8 libc6-dev-armel-cross_2.28-7cross1 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-3 libcom-err2_1.45.0-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libcurl3-gnutls_7.64.0-2 libcurl4-gnutls-dev_7.64.0-2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.248 libdebian-dpkgcross-perl_2.6.15-2 libdpkg-perl_1.19.5 libelf1_0.176-1 libext2fs2_1.45.0-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-3 libgcc-8-dev-armel-cross_8.3.0-2cross1 libgcc1_1:8.3.0-3 libgcc1-armel-cross_1:8.3.0-2cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.6-3 libgomp1_8.3.0-3 libgomp1-armel-cross_8.3.0-2cross1 libgpg-error0_1.35-1 libgssapi-krb5-2_1.17-2 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-3 libk5crypto3_1.17-2 libkeyutils1_1.6-6 libkrb5-3_1.17-2 libkrb5support0_1.17-2 libldap-2.4-2_2.4.47+dfsg-3 libldap-common_2.4.47+dfsg-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-3 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-3 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnghttp2-14_1.37.0-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-5 libpipeline1_1.5.1-2 libpsl5_0.20.2-2 libquadmath0_8.3.0-3 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.0-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1b-1 libstdc++-8-dev_8.3.0-3 libstdc++-8-dev-armel-cross_8.3.0-2cross1 libstdc++6_8.3.0-3 libstdc++6-armel-cross_8.3.0-2cross1 libsystemd0_241-2 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-3 libubsan1_8.3.0-3 libubsan1-armel-cross_8.3.0-2cross1 libuchardet0_0.0.6-3 libudev1_241-2 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.28-2 linux-libc-dev-armel-cross_4.19.20-1cross1 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-5 perl-base_5.28.1-5 perl-modules-5.28_5.28.1-5 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-staden-io-lib-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-5 tzdata_2018i-2 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Jan 2 11:09:19 2019 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./staden-io-lib_1.14.11-6.dsc dpkg-source: info: extracting staden-io-lib in /<> dpkg-source: info: unpacking staden-io-lib_1.14.11.orig.tar.gz dpkg-source: info: unpacking staden-io-lib_1.14.11-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying pathmax.patch dpkg-source: info: applying fix_fseeko.patch dpkg-source: info: applying fix_non_x86.patch dpkg-source: info: applying remove_bashism.patch dpkg-source: info: applying d4591b5.patch dpkg-source: info: applying 37b33d3.patch dpkg-source: info: applying 1b28b6a.patch dpkg-source: info: applying 242cd6b.patch dpkg-source: info: applying serial-tests.patch dpkg-source: info: applying spelling Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.armel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-dd3cfc2d-454a-4f40-9b3c-a3f0ae0d1d0b SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package staden-io-lib dpkg-buildpackage: info: source version 1.14.11-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type arm-linux-gnueabi does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture armel fakeroot debian/rules clean dh clean --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -f tests/.done tests/data/ce\#sorted.sam tests/data/ce\#unsorted.sam ## ## Try to verify correct ABI version right in the beginning ## Strangely enough d-shlibmove fails in detecting it in this package ## Since upstream build system creates libstaden-read.so.11.1.0 this code is not ## activated but it should be considered in case of future problems with ABI version ## #UPSTREAMABI=`grep ^VERS_CURRENT configure.in | sed 's/^VERS_CURRENT[[:space:]]*=\([0-9]\+\)[[:space:]]*/\1/'` ; \ #DEBABI=`grep '^Package: libstaden-read[0-9]\+' debian/control | sed 's/Package: libstaden-read\([0-9]\+\)/\1/'` ; \ #if [ ${UPSTREAMABI} -ne ${DEBABI} ] ; then \ # echo "Upstream has bumped ABI to ${UPSTREAMABI} but Debian is using libstaden-read${DEBABI} (see bug #710225)" ; \ # exit 1 ; \ #fi make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch --no-parallel dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:65: installing './compile' configure.in:67: installing './config.guess' configure.in:67: installing './config.sub' configure.in:5: installing './install-sh' configure.in:5: installing './missing' io_lib/Makefile.am:152: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' io_lib/Makefile.am: installing './depcomp' progs/Makefile.am:150: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') tests/Makefile.am:59: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabi --libexecdir=\${prefix}/lib/arm-linux-gnueabi --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=arm-linux-gnueabi configure: loading site script /etc/dpkg-cross/cross-config.armel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for arm-linux-gnueabi-strip... arm-linux-gnueabi-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for arm-linux-gnueabi-gcc... arm-linux-gnueabi-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether arm-linux-gnueabi-gcc accepts -g... yes checking for arm-linux-gnueabi-gcc option to accept ISO C89... none needed checking whether arm-linux-gnueabi-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of arm-linux-gnueabi-gcc... none checking build system type... x86_64-pc-linux-gnu checking host system type... arm-unknown-linux-gnueabi checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by arm-linux-gnueabi-gcc... /usr/arm-linux-gnueabi/bin/ld checking if the linker (/usr/arm-linux-gnueabi/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/arm-linux-gnueabi-nm -B checking the name lister (/usr/bin/arm-linux-gnueabi-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to arm-unknown-linux-gnueabi format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/arm-linux-gnueabi/bin/ld option to reload object files... -r checking for arm-linux-gnueabi-objdump... arm-linux-gnueabi-objdump checking how to recognize dependent libraries... pass_all checking for arm-linux-gnueabi-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for arm-linux-gnueabi-ar... arm-linux-gnueabi-ar checking for archiver @FILE support... @ checking for arm-linux-gnueabi-strip... (cached) arm-linux-gnueabi-strip checking for arm-linux-gnueabi-ranlib... arm-linux-gnueabi-ranlib checking command to parse /usr/bin/arm-linux-gnueabi-nm -B output from arm-linux-gnueabi-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for arm-linux-gnueabi-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... arm-linux-gnueabi-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if arm-linux-gnueabi-gcc supports -fno-rtti -fno-exceptions... no checking for arm-linux-gnueabi-gcc option to produce PIC... -fPIC -DPIC checking if arm-linux-gnueabi-gcc PIC flag -fPIC -DPIC works... yes checking if arm-linux-gnueabi-gcc static flag -static works... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... yes checking if arm-linux-gnueabi-gcc supports -c -o file.o... (cached) yes checking whether the arm-linux-gnueabi-gcc linker (/usr/arm-linux-gnueabi/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for grep that handles long lines and -e... (cached) /bin/grep checking for C compiler warning flags... -Wall checking for gawk... (cached) mawk checking for curl-config... /usr/bin/curl-config checking for the version of libcurl... 7.64.0 checking whether libcurl just needs -lcurl... yes checking whether libcurl is usable... yes checking for curl_free... yes checking for inflateEnd in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for library containing gethostbyname... none required checking for library containing socket... none required checking for BZ2_bzBuffToBuffCompress in -lbz2... no checking for lzma_easy_buffer_encode in -llzma... no checking for bsc_compress in -lbsc... no checking whether byte ordering is bigendian... (cached) no checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for unistd.h... (cached) yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for zlib.h... (cached) yes checking stdio_ext.h usability... yes checking stdio_ext.h presence... yes checking for stdio_ext.h... yes checking whether byte ordering is bigendian... (cached) no checking size of short... (cached) 2 checking size of int... (cached) 4 checking size of long... (cached) 4 checking for inline... inline checking for mode_t... yes checking for fileno... yes checking for fstat... yes checking for mallopt... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... 64 checking for _LARGEFILE_SOURCE value needed for large files... no checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... no checking for library containing pthread_join... -lpthread checking for library containing cos... -lm checking for strdup... yes checking for fsync... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating io_lib/Makefile config.status: creating progs/Makefile config.status: creating tests/Makefile config.status: creating io_lib-config config.status: creating io_lib/os.h config.status: creating io_lib_config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in io_lib make[3]: Entering directory '/<>/io_lib' /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo './'`Read.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Read.c -fPIC -DPIC -o .libs/libstaden_read_la-Read.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Read.c -o libstaden_read_la-Read.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -o libstaden_read_la-scf_extras.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -fPIC -DPIC -o .libs/libstaden_read_la-translate.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -o libstaden_read_la-translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo './'`compression.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c compression.c -fPIC -DPIC -o .libs/libstaden_read_la-compression.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c compression.c -o libstaden_read_la-compression.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo './'`ztr.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr.c -o libstaden_read_la-ztr.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo './'`ztr_translate.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -o libstaden_read_la-ztr_translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c deflate_interlaced.c -fPIC -DPIC -o .libs/libstaden_read_la-deflate_interlaced.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c deflate_interlaced.c -o libstaden_read_la-deflate_interlaced.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo './'`fpoint.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fpoint.c -fPIC -DPIC -o .libs/libstaden_read_la-fpoint.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fpoint.c -o libstaden_read_la-fpoint.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo './'`seqIOABI.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOABI.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOABI.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOABI.c -o libstaden_read_la-seqIOABI.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo './'`seqIOALF.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOALF.c -fPIC -DPIC -o 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--mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-binning.lo `test -f 'binning.c' || echo './'`binning.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c binning.c -fPIC -DPIC -o .libs/libstaden_read_la-binning.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c binning.c -o libstaden_read_la-binning.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat 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-DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bgzip.c -fPIC -DPIC -o .libs/libstaden_read_la-bgzip.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bgzip.c -o libstaden_read_la-bgzip.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-tokenise_name3.lo `test -f 'tokenise_name3.c' || echo './'`tokenise_name3.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c tokenise_name3.c -fPIC -DPIC -o .libs/libstaden_read_la-tokenise_name3.o tokenise_name3.c: In function 'decode_names': tokenise_name3.c:1508:52: warning: passing argument 4 of 'uncompress' from incompatible pointer type [-Wincompatible-pointer-types] clen = uncompress(&in[o], sz-o, ctx->desc[i].buf, &ctx->desc[i].buf_a); ^~~~~~~~~~~~~~~~~~~ tokenise_name3.c:1179:77: note: expected 'uint64_t *' {aka 'long long unsigned int *'} but argument is of type 'size_t *' {aka 'unsigned int *'} static int uncompress(uint8_t *in, uint64_t in_len, uint8_t *out, uint64_t *out_len) { ~~~~~~~~~~^~~~~~~ libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c tokenise_name3.c -o libstaden_read_la-tokenise_name3.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-fqzcomp_qual.lo `test -f 'fqzcomp_qual.c' || echo './'`fqzcomp_qual.c libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fqzcomp_qual.c -fPIC -DPIC -o .libs/libstaden_read_la-fqzcomp_qual.o libtool: compile: arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fqzcomp_qual.c -o libstaden_read_la-fqzcomp_qual.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 13:1:0 -Wl,-z,relro -Wl,-z,now -o libstaden-read.la -rpath /usr/lib/arm-linux-gnueabi libstaden_read_la-Read.lo libstaden_read_la-scf_extras.lo libstaden_read_la-translate.lo libstaden_read_la-compression.lo libstaden_read_la-ztr.lo libstaden_read_la-ztr_translate.lo libstaden_read_la-deflate_interlaced.lo libstaden_read_la-fpoint.lo libstaden_read_la-seqIOABI.lo libstaden_read_la-seqIOALF.lo libstaden_read_la-expFileIO.lo libstaden_read_la-seqIOPlain.lo libstaden_read_la-misc_scf.lo libstaden_read_la-read_scf.lo libstaden_read_la-write_scf.lo libstaden_read_la-sff.lo libstaden_read_la-srf.lo libstaden_read_la-array.lo libstaden_read_la-compress.lo libstaden_read_la-error.lo libstaden_read_la-files.lo libstaden_read_la-find.lo libstaden_read_la-mach-io.lo libstaden_read_la-open_trace_file.lo libstaden_read_la-read_alloc.lo libstaden_read_la-strings.lo libstaden_read_la-traceType.lo libstaden_read_la-xalloc.lo libstaden_read_la-vlen.lo libstaden_read_la-hash_table.lo libstaden_read_la-jenkins_lookup3.lo libstaden_read_la-mFILE.lo libstaden_read_la-pooled_alloc.lo libstaden_read_la-bam.lo libstaden_read_la-sam_header.lo libstaden_read_la-rANS_static.lo libstaden_read_la-rANS_static4x16pr.lo libstaden_read_la-cram_codecs.lo libstaden_read_la-cram_encode.lo libstaden_read_la-cram_decode.lo libstaden_read_la-cram_stats.lo libstaden_read_la-cram_io.lo libstaden_read_la-cram_index.lo libstaden_read_la-zfio.lo libstaden_read_la-dstring.lo libstaden_read_la-string_alloc.lo libstaden_read_la-md5.lo libstaden_read_la-crc32.lo libstaden_read_la-scram.lo libstaden_read_la-thread_pool.lo libstaden_read_la-binning.lo libstaden_read_la-cram_bambam.lo libstaden_read_la-bgzip.lo libstaden_read_la-tokenise_name3.lo libstaden_read_la-fqzcomp_qual.lo -lz -lcurl -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -shared -fPIC -DPIC .libs/libstaden_read_la-Read.o .libs/libstaden_read_la-scf_extras.o .libs/libstaden_read_la-translate.o .libs/libstaden_read_la-compression.o .libs/libstaden_read_la-ztr.o .libs/libstaden_read_la-ztr_translate.o .libs/libstaden_read_la-deflate_interlaced.o .libs/libstaden_read_la-fpoint.o .libs/libstaden_read_la-seqIOABI.o .libs/libstaden_read_la-seqIOALF.o .libs/libstaden_read_la-expFileIO.o .libs/libstaden_read_la-seqIOPlain.o .libs/libstaden_read_la-misc_scf.o .libs/libstaden_read_la-read_scf.o .libs/libstaden_read_la-write_scf.o .libs/libstaden_read_la-sff.o .libs/libstaden_read_la-srf.o .libs/libstaden_read_la-array.o .libs/libstaden_read_la-compress.o .libs/libstaden_read_la-error.o .libs/libstaden_read_la-files.o .libs/libstaden_read_la-find.o .libs/libstaden_read_la-mach-io.o .libs/libstaden_read_la-open_trace_file.o .libs/libstaden_read_la-read_alloc.o .libs/libstaden_read_la-strings.o .libs/libstaden_read_la-traceType.o .libs/libstaden_read_la-xalloc.o .libs/libstaden_read_la-vlen.o .libs/libstaden_read_la-hash_table.o .libs/libstaden_read_la-jenkins_lookup3.o .libs/libstaden_read_la-mFILE.o .libs/libstaden_read_la-pooled_alloc.o .libs/libstaden_read_la-bam.o .libs/libstaden_read_la-sam_header.o .libs/libstaden_read_la-rANS_static.o .libs/libstaden_read_la-rANS_static4x16pr.o .libs/libstaden_read_la-cram_codecs.o .libs/libstaden_read_la-cram_encode.o .libs/libstaden_read_la-cram_decode.o .libs/libstaden_read_la-cram_stats.o .libs/libstaden_read_la-cram_io.o .libs/libstaden_read_la-cram_index.o .libs/libstaden_read_la-zfio.o .libs/libstaden_read_la-dstring.o .libs/libstaden_read_la-string_alloc.o .libs/libstaden_read_la-md5.o .libs/libstaden_read_la-crc32.o .libs/libstaden_read_la-scram.o .libs/libstaden_read_la-thread_pool.o .libs/libstaden_read_la-binning.o .libs/libstaden_read_la-cram_bambam.o .libs/libstaden_read_la-bgzip.o .libs/libstaden_read_la-tokenise_name3.o .libs/libstaden_read_la-fqzcomp_qual.o -lz /usr/lib/arm-linux-gnueabi/libcurl-gnutls.so -lm -lpthread -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libstaden-read.so.13 -o .libs/libstaden-read.so.13.0.1 libtool: link: (cd ".libs" && rm -f "libstaden-read.so.13" && ln -s "libstaden-read.so.13.0.1" "libstaden-read.so.13") libtool: link: (cd ".libs" && rm -f "libstaden-read.so" && ln -s "libstaden-read.so.13.0.1" "libstaden-read.so") libtool: link: arm-linux-gnueabi-ar cru .libs/libstaden-read.a libstaden_read_la-Read.o libstaden_read_la-scf_extras.o libstaden_read_la-translate.o libstaden_read_la-compression.o libstaden_read_la-ztr.o libstaden_read_la-ztr_translate.o libstaden_read_la-deflate_interlaced.o libstaden_read_la-fpoint.o libstaden_read_la-seqIOABI.o libstaden_read_la-seqIOALF.o libstaden_read_la-expFileIO.o libstaden_read_la-seqIOPlain.o libstaden_read_la-misc_scf.o libstaden_read_la-read_scf.o libstaden_read_la-write_scf.o libstaden_read_la-sff.o libstaden_read_la-srf.o libstaden_read_la-array.o libstaden_read_la-compress.o libstaden_read_la-error.o libstaden_read_la-files.o libstaden_read_la-find.o libstaden_read_la-mach-io.o libstaden_read_la-open_trace_file.o libstaden_read_la-read_alloc.o libstaden_read_la-strings.o libstaden_read_la-traceType.o libstaden_read_la-xalloc.o libstaden_read_la-vlen.o libstaden_read_la-hash_table.o libstaden_read_la-jenkins_lookup3.o libstaden_read_la-mFILE.o libstaden_read_la-pooled_alloc.o libstaden_read_la-bam.o libstaden_read_la-sam_header.o libstaden_read_la-rANS_static.o libstaden_read_la-rANS_static4x16pr.o libstaden_read_la-cram_codecs.o libstaden_read_la-cram_encode.o libstaden_read_la-cram_decode.o libstaden_read_la-cram_stats.o libstaden_read_la-cram_io.o libstaden_read_la-cram_index.o libstaden_read_la-zfio.o libstaden_read_la-dstring.o libstaden_read_la-string_alloc.o libstaden_read_la-md5.o libstaden_read_la-crc32.o libstaden_read_la-scram.o libstaden_read_la-thread_pool.o libstaden_read_la-binning.o libstaden_read_la-cram_bambam.o libstaden_read_la-bgzip.o libstaden_read_la-tokenise_name3.o libstaden_read_la-fqzcomp_qual.o arm-linux-gnueabi-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: arm-linux-gnueabi-ranlib .libs/libstaden-read.a libtool: link: ( cd ".libs" && rm -f "libstaden-read.la" && ln -s "../libstaden-read.la" "libstaden-read.la" ) make[3]: Leaving directory '/<>/io_lib' Making all in progs make[3]: Entering directory '/<>/progs' arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o convert_trace.o convert_trace.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o convert_trace convert_trace.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/convert_trace convert_trace.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o makeSCF.o makeSCF.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o makeSCF makeSCF.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/makeSCF makeSCF.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract_seq.o extract_seq.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o extract_seq extract_seq.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extract_seq extract_seq.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract_qual.o extract_qual.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o extract_qual extract_qual.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extract_qual extract_qual.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract_fastq.o extract_fastq.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o extract_fastq extract_fastq.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extract_fastq extract_fastq.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o index_tar.o index_tar.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o index_tar index_tar.o -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o index_tar index_tar.o -lm -lpthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scf_dump.o scf_dump.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scf_dump scf_dump.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scf_dump scf_dump.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scf_info.o scf_info.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scf_info scf_info.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scf_info scf_info.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread 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-fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_pileup scram_pileup.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_pileup scram_pileup.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_flagstat.o scram_flagstat.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_flagstat scram_flagstat.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_flagstat scram_flagstat.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_test.o scram_test.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_test scram_test.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_test scram_test.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_size.o cram_size.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_size cram_size.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_size cram_size.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_filter.o cram_filter.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_filter cram_filter.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_filter cram_filter.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread make[3]: Leaving directory '/<>/progs' Making all in tests make[3]: Entering directory '/<>/tests' arm-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_io_test.o cram_io_test.c /bin/bash ../libtool --tag=CC --mode=link arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_io_test cram_io_test.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: arm-linux-gnueabi-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_io_test cram_io_test.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread make[3]: Leaving directory '/<>/tests' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --no-parallel dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in io_lib make[2]: Entering directory '/<>/io_lib' make[3]: Entering directory '/<>/io_lib' /bin/mkdir -p '/<>/debian/tmp/usr/lib/arm-linux-gnueabi' /bin/bash ../libtool --mode=install /usr/bin/install -c libstaden-read.la '/<>/debian/tmp/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/libstaden-read.so.13.0.1 /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.so.13.0.1 libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libstaden-read.so.13.0.1 libstaden-read.so.13 || { rm -f libstaden-read.so.13 && ln -s libstaden-read.so.13.0.1 libstaden-read.so.13; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/arm-linux-gnueabi && { ln -s -f libstaden-read.so.13.0.1 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.13.0.1 libstaden-read.so; }; }) libtool: install: /usr/bin/install -c .libs/libstaden-read.lai /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.la libtool: install: /usr/bin/install -c .libs/libstaden-read.a /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.a libtool: install: arm-linux-gnueabi-ranlib /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabi' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/io_lib' make[2]: Leaving directory '/<>/io_lib' Making install in progs make[2]: Entering directory '/<>/progs' make[3]: Entering directory '/<>/progs' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c convert_trace makeSCF extract_seq extract_qual extract_fastq index_tar scf_dump scf_info scf_update get_comment hash_tar hash_extract hash_list trace_dump hash_sff append_sff ztr_dump srf_dump_all srf_index_hash srf_extract_linear srf_extract_hash srf2fastq srf2fasta srf_filter srf_info srf_list hash_exp cram_dump cram_index scramble scram_merge scram_pileup scram_flagstat scram_test cram_size cram_filter '/<>/debian/tmp/usr/bin' libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/convert_trace /<>/debian/tmp/usr/bin/convert_trace libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/makeSCF /<>/debian/tmp/usr/bin/makeSCF libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/extract_seq /<>/debian/tmp/usr/bin/extract_seq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/extract_qual /<>/debian/tmp/usr/bin/extract_qual libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/extract_fastq /<>/debian/tmp/usr/bin/extract_fastq libtool: install: /usr/bin/install -c index_tar /<>/debian/tmp/usr/bin/index_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scf_dump /<>/debian/tmp/usr/bin/scf_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scf_info /<>/debian/tmp/usr/bin/scf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scf_update /<>/debian/tmp/usr/bin/scf_update libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/get_comment /<>/debian/tmp/usr/bin/get_comment libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/hash_tar /<>/debian/tmp/usr/bin/hash_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/hash_extract /<>/debian/tmp/usr/bin/hash_extract libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/hash_list /<>/debian/tmp/usr/bin/hash_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/trace_dump /<>/debian/tmp/usr/bin/trace_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/hash_sff /<>/debian/tmp/usr/bin/hash_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/append_sff /<>/debian/tmp/usr/bin/append_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/ztr_dump /<>/debian/tmp/usr/bin/ztr_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf_dump_all /<>/debian/tmp/usr/bin/srf_dump_all libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf_index_hash /<>/debian/tmp/usr/bin/srf_index_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf_extract_linear /<>/debian/tmp/usr/bin/srf_extract_linear libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf_extract_hash /<>/debian/tmp/usr/bin/srf_extract_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf2fastq /<>/debian/tmp/usr/bin/srf2fastq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf2fasta /<>/debian/tmp/usr/bin/srf2fasta libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf_filter /<>/debian/tmp/usr/bin/srf_filter libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf_info /<>/debian/tmp/usr/bin/srf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/srf_list /<>/debian/tmp/usr/bin/srf_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/hash_exp /<>/debian/tmp/usr/bin/hash_exp libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/cram_dump /<>/debian/tmp/usr/bin/cram_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/cram_index /<>/debian/tmp/usr/bin/cram_index libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scramble /<>/debian/tmp/usr/bin/scramble libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scram_merge /<>/debian/tmp/usr/bin/scram_merge libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scram_pileup /<>/debian/tmp/usr/bin/scram_pileup libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scram_flagstat /<>/debian/tmp/usr/bin/scram_flagstat libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/scram_test /<>/debian/tmp/usr/bin/scram_test libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/cram_size /<>/debian/tmp/usr/bin/cram_size libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/arm-linux-gnueabi' libtool: install: /usr/bin/install -c .libs/cram_filter /<>/debian/tmp/usr/bin/cram_filter make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/progs' make[2]: Leaving directory '/<>/progs' Making install in tests make[2]: Entering directory '/<>/tests' make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/tests' make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c io_lib-config '/<>/debian/tmp/usr/bin' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 man/man1/srf_index_hash.1 man/man1/srf_info.1 man/man1/srf_list.1 man/man1/srf2fasta.1 man/man1/srf2fastq.1 man/man1/scramble.1 '/<>/debian/tmp/usr/share/man/man1' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man3' /usr/bin/install -c -m 644 man/man3/read_scf_header.3 man/man3/read_allocate.3 man/man3/ExperimentFile.3 man/man3/write_reading.3 man/man3/write_scf.3 man/man3/read_deallocate.3 man/man3/fwrite_reading.3 man/man3/read2scf.3 man/man3/scf2read.3 man/man3/fwrite_scf.3 man/man3/write_scf_header.3 man/man3/read_reading.3 man/man3/read_scf.3 man/man3/exp2read.3 man/man3/fread_reading.3 man/man3/read2exp.3 man/man3/fread_scf.3 '/<>/debian/tmp/usr/share/man/man3' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man4' /usr/bin/install -c -m 644 man/man4/Read.4 '/<>/debian/tmp/usr/share/man/man4' /bin/mkdir -p '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/Read.h io_lib/scf_extras.h io_lib/translate.h io_lib/abi.h io_lib/fpoint.h io_lib/seqIOABI.h io_lib/alf.h io_lib/expFileIO.h io_lib/plain.h io_lib/scf.h io_lib/sff.h io_lib/array.h io_lib/compress.h io_lib/error.h io_lib/mach-io.h io_lib/misc.h io_lib/open_trace_file.h io_lib/tar_format.h io_lib/traceType.h io_lib/xalloc.h io_lib/mFILE.h io_lib/stdio_hack.h io_lib/vlen.h io_lib/hash_table.h io_lib/jenkins_lookup3.h io_lib/os.h io_lib/compression.h io_lib/ztr.h io_lib/deflate_interlaced.h io_lib/srf.h io_lib/pooled_alloc.h io_lib/cram.h io_lib/cram_structs.h io_lib/cram_io.h io_lib/cram_encode.h io_lib/cram_decode.h io_lib/cram_codecs.h io_lib/cram_index.h io_lib/cram_stats.h io_lib/zfio.h '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/scram.h io_lib/bam.h io_lib/sam_header.h io_lib/dstring.h io_lib/string_alloc.h io_lib_config.h io_lib/md5.h io_lib/thread_pool.h io_lib/binning.h io_lib/bgzip.h '/<>/debian/tmp/usr/include/io_lib' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' dh_install -a mkdir -p /<>/debian/libstaden-read-dev/usr/bin mv /<>/debian/staden-io-lib-utils/usr/bin/io_lib-config /<>/debian/libstaden-read-dev/usr/bin # # Call d-shlibmove to comply with library packaging guide d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev "debian/tmp/usr/include" usr \ debian/tmp/usr/lib/*/libstaden-read.so Library package automatic movement utility --> libcurl4-gnutls-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libstaden-read-dev/usr/lib/arm-linux-gnueabi install -d -m 755 debian/libstaden-read13/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.a debian/libstaden-read-dev/usr/lib/arm-linux-gnueabi mv debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.so debian/libstaden-read-dev/usr/lib/arm-linux-gnueabi mv /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.so.13 debian/libstaden-read13/usr/lib/arm-linux-gnueabi mv /<>/debian/tmp/usr/lib/arm-linux-gnueabi/libstaden-read.so.13.0.1 debian/libstaden-read13/usr/lib/arm-linux-gnueabi PKGDEV=libstaden-read-dev PKGSHL=libstaden-read13 install -d -m 755 debian/libstaden-read-dev/usr mv debian/tmp/usr/include debian/libstaden-read-dev/usr # # make sure io_lib-config --libs will not return -pie (see #825461) find debian/*/usr/bin -name io_lib-config -exec sed -i -e 's/ *-fPIE//' -e 's/ *-pie//' \{\} \; #dh_installman # manpages need some post editing but in case it could be automated, this code would help # mkdir -p # help2man --no-discard-stderr --no-info --help-option='""' \ # --name='filter SRF files for various purposes' \ # --version-string="" \ # /<>/debian//usr/bin/srf_filter > /srf_filter.1 make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'staden-io-lib-utils' in '../staden-io-lib-utils_1.14.11-6_armel.deb'. dpkg-deb: building package 'staden-io-lib-utils-dbgsym' in '../staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb'. dpkg-deb: building package 'libstaden-read-dev' in '../libstaden-read-dev_1.14.11-6_armel.deb'. dpkg-deb: building package 'libstaden-read13' in '../libstaden-read13_1.14.11-6_armel.deb'. dpkg-deb: building package 'libstaden-read13-dbgsym' in '../libstaden-read13-dbgsym_1.14.11-6_armel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../staden-io-lib_1.14.11-6_armel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-03-22T10:34:26Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-qNIpTa/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-staden-io-lib-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-qNIpTa/apt_archive ./ InRelease Get:2 copy:/<>/resolver-qNIpTa/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-qNIpTa/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-qNIpTa/apt_archive ./ Sources [786 B] Get:5 copy:/<>/resolver-qNIpTa/apt_archive ./ Packages [855 B] Fetched 2604 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:armel t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7775 kB of archives. After this operation, 20.8 MB of additional disk space will be used. Get:1 copy:/<>/resolver-qNIpTa/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-1 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-1 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-1 [867 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1b-1 [1531 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.11.0 [1187 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7775 kB in 0s (38.7 MB/s) Selecting previously unselected package netbase. (Reading database ... 17902 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-1_amd64.deb ... Unpacking gpgconf (2.2.13-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.27.2-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-1) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.13-1_amd64.deb ... Unpacking gpg (2.2.13-1) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../09-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../10-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../11-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../12-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libcgi-pm-perl. Preparing to unpack .../13-libcgi-pm-perl_4.40-1_all.deb ... Unpacking libcgi-pm-perl (4.40-1) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../14-libsub-name-perl_0.21-1+b3_amd64.deb ... Unpacking libsub-name-perl (0.21-1+b3) ... Selecting previously unselected package libclass-accessor-perl. Preparing to unpack .../15-libclass-accessor-perl_0.51-1_all.deb ... Unpacking libclass-accessor-perl (0.51-1) ... Selecting previously unselected package libclone-perl. Preparing to unpack .../16-libclone-perl_0.41-1+b1_amd64.deb ... Unpacking libclone-perl (0.41-1+b1) ... Selecting previously unselected package libdigest-hmac-perl. Preparing to unpack .../17-libdigest-hmac-perl_1.03+dfsg-2_all.deb ... Unpacking libdigest-hmac-perl (1.03+dfsg-2) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../18-libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../19-libssl1.1_1.1.1b-1_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1b-1) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../20-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../21-libnet-ssleay-perl_1.85-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl (1.85-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../22-libio-socket-ssl-perl_2.060-3_all.deb ... Unpacking libio-socket-ssl-perl (2.060-3) ... Selecting previously unselected package libnet-smtp-ssl-perl. Preparing to unpack .../23-libnet-smtp-ssl-perl_1.04-1_all.deb ... Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../24-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../25-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../26-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../27-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../28-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. Preparing to unpack .../29-libexporter-tiny-perl_1.002001-1_all.deb ... Unpacking libexporter-tiny-perl (1.002001-1) ... Selecting previously unselected package libipc-system-simple-perl. Preparing to unpack .../30-libipc-system-simple-perl_1.25-4_all.deb ... Unpacking libipc-system-simple-perl (1.25-4) ... Selecting previously unselected package libfile-basedir-perl. Preparing to unpack .../31-libfile-basedir-perl_0.08-1_all.deb ... Unpacking libfile-basedir-perl (0.08-1) ... Selecting previously unselected package libfuture-perl. Preparing to unpack .../32-libfuture-perl_0.39-1_all.deb ... Unpacking libfuture-perl (0.39-1) ... Selecting previously unselected package libstruct-dumb-perl. Preparing to unpack .../33-libstruct-dumb-perl_0.09-1_all.deb ... Unpacking libstruct-dumb-perl (0.09-1) ... Selecting previously unselected package libio-async-perl. Preparing to unpack .../34-libio-async-perl_0.72-1_all.deb ... Unpacking libio-async-perl (0.72-1) ... Selecting previously unselected package libio-pty-perl. Preparing to unpack .../35-libio-pty-perl_1%3a1.08-1.1+b5_amd64.deb ... Unpacking libio-pty-perl (1:1.08-1.1+b5) ... Selecting previously unselected package libipc-run-perl. Preparing to unpack .../36-libipc-run-perl_20180523.0-1_all.deb ... Unpacking libipc-run-perl (20180523.0-1) ... Selecting previously unselected package liblist-moreutils-perl. Preparing to unpack .../37-liblist-moreutils-perl_0.416-1+b4_amd64.deb ... Unpacking liblist-moreutils-perl (0.416-1+b4) ... Selecting previously unselected package libparse-debianchangelog-perl. Preparing to unpack .../38-libparse-debianchangelog-perl_1.2.0-13_all.deb ... Unpacking libparse-debianchangelog-perl (1.2.0-13) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../39-libpath-tiny-perl_0.108-1_all.deb ... Unpacking libpath-tiny-perl (0.108-1) ... Selecting previously unselected package libtext-levenshtein-perl. Preparing to unpack .../40-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../41-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../42-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../43-libyaml-libyaml-perl_0.76+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.76+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../44-patchutils_0.3.4-2_amd64.deb ... Unpacking patchutils (0.3.4-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../45-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../46-lintian_2.11.0_all.deb ... Unpacking lintian (2.11.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:armel. Preparing to unpack .../47-sbuild-build-depends-lintian-dummy_0.invalid.0_armel.deb ... Unpacking sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libssl1.1:amd64 (1.1.1b-1) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libsqlite3-0:amd64 (3.27.2-1) ... Setting up libfuture-perl (0.39-1) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libio-async-perl (0.72-1) ... Setting up patchutils (0.3.4-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up diffstat (1.62-1) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up netbase (5.6) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (7.0-5) ... Setting up liburi-perl (1.76-1) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up gpgconf (2.2.13-1) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up gpg (2.2.13-1) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.11.0) ... Setting up sbuild-build-depends-lintian-dummy:armel (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-8) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ staden-io-lib_1.14.11-6_armel.changes: -------------------------------------- Format: 1.8 Date: Wed, 02 Jan 2019 03:08:23 -0800 Source: staden-io-lib Binary: libstaden-read-dev libstaden-read13 libstaden-read13-dbgsym staden-io-lib-utils staden-io-lib-utils-dbgsym Built-For-Profiles: cross nocheck Architecture: armel Version: 1.14.11-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libstaden-read-dev - development files for libstaden-read libstaden-read13 - Staden library for reading and writing DNA sequencing results staden-io-lib-utils - programs for manipulating DNA sequencing files Closes: 916262 Changes: staden-io-lib (1.14.11-6) unstable; urgency=medium . * Switch to -O0 on armhf, mips. Closes: #916262 * Standards-Version: 4.3.0 * debian/control: mark staden-io-lib-examples as Multi-Arch: foreign * changelog & debian/patches/spelling: typo fix (independent) Checksums-Sha1: 230f2120e07d0f534b83ff55cfacaa3461afa6da 330148 libstaden-read-dev_1.14.11-6_armel.deb c7b1e66d1f7c47629de94f2792e864c97e65508a 678392 libstaden-read13-dbgsym_1.14.11-6_armel.deb 6f76212806ed5f90c53b2e84cdb06feabc6de7b5 250704 libstaden-read13_1.14.11-6_armel.deb 19f6818337a416fde351829d85d1466872d0423c 401984 staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb b4163507da93087d00056371b6bb878c962d04ef 158288 staden-io-lib-utils_1.14.11-6_armel.deb 17f0c531852b1275d338b2c31d912e3fd55aa6b7 6399 staden-io-lib_1.14.11-6_armel.buildinfo Checksums-Sha256: e707cc64f35574f023d0733e04b16f614cf31ea89023596eabcc9c240e39308a 330148 libstaden-read-dev_1.14.11-6_armel.deb 2a2995854f16a128d52dbecd442ab8eba36923b268647f63ad814dd9defa227f 678392 libstaden-read13-dbgsym_1.14.11-6_armel.deb 84851436cc12700ee2a976d069fe92d95618822916419ba904f3383bf42dbe4c 250704 libstaden-read13_1.14.11-6_armel.deb 54ae3685b2e9cefd5268916c8a2dbcd773945762ca49ce3e2de9e37082275060 401984 staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb 44fcc8afe39234fe0cbadc67f120a4e72d5e1201371834db557ece982f0cd112 158288 staden-io-lib-utils_1.14.11-6_armel.deb 5d22fed388c146c5217f03b62d6e1ef6eb024bbf51a8b2263fbcaff0d0da57d7 6399 staden-io-lib_1.14.11-6_armel.buildinfo Files: 00cc59d54ba62ed84f8149d104e12756 330148 libdevel optional libstaden-read-dev_1.14.11-6_armel.deb 25ae018e0e334f4a8e49103f8ed207f2 678392 debug optional libstaden-read13-dbgsym_1.14.11-6_armel.deb d3e116e7b7af0e766a462fafd52fc7ca 250704 libs optional libstaden-read13_1.14.11-6_armel.deb 90e22630559b61a4387651f09ad9e13f 401984 debug optional staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb 7437f82e7f7399102aa45b782301ebc5 158288 science optional staden-io-lib-utils_1.14.11-6_armel.deb 0a4e72457a6f6b1f31cc0ca79cf0b2da 6399 science optional staden-io-lib_1.14.11-6_armel.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: staden-io-lib Binary: staden-io-lib-utils libstaden-read-dev libstaden-read13 staden-io-lib-examples Architecture: armel Version: 1.14.11-6 Checksums-Md5: 00cc59d54ba62ed84f8149d104e12756 330148 libstaden-read-dev_1.14.11-6_armel.deb 25ae018e0e334f4a8e49103f8ed207f2 678392 libstaden-read13-dbgsym_1.14.11-6_armel.deb d3e116e7b7af0e766a462fafd52fc7ca 250704 libstaden-read13_1.14.11-6_armel.deb 90e22630559b61a4387651f09ad9e13f 401984 staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb 7437f82e7f7399102aa45b782301ebc5 158288 staden-io-lib-utils_1.14.11-6_armel.deb Checksums-Sha1: 230f2120e07d0f534b83ff55cfacaa3461afa6da 330148 libstaden-read-dev_1.14.11-6_armel.deb c7b1e66d1f7c47629de94f2792e864c97e65508a 678392 libstaden-read13-dbgsym_1.14.11-6_armel.deb 6f76212806ed5f90c53b2e84cdb06feabc6de7b5 250704 libstaden-read13_1.14.11-6_armel.deb 19f6818337a416fde351829d85d1466872d0423c 401984 staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb b4163507da93087d00056371b6bb878c962d04ef 158288 staden-io-lib-utils_1.14.11-6_armel.deb Checksums-Sha256: e707cc64f35574f023d0733e04b16f614cf31ea89023596eabcc9c240e39308a 330148 libstaden-read-dev_1.14.11-6_armel.deb 2a2995854f16a128d52dbecd442ab8eba36923b268647f63ad814dd9defa227f 678392 libstaden-read13-dbgsym_1.14.11-6_armel.deb 84851436cc12700ee2a976d069fe92d95618822916419ba904f3383bf42dbe4c 250704 libstaden-read13_1.14.11-6_armel.deb 54ae3685b2e9cefd5268916c8a2dbcd773945762ca49ce3e2de9e37082275060 401984 staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb 44fcc8afe39234fe0cbadc67f120a4e72d5e1201371834db557ece982f0cd112 158288 staden-io-lib-utils_1.14.11-6_armel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Fri, 22 Mar 2019 10:34:26 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.0), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.1), base-passwd (= 3.5.46), bash (= 5.0-2), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-3), d-shlibs (= 0.84), dash (= 0.5.10.2-5), debconf (= 1.5.71), debhelper (= 12.1.1), debian-archive-keyring (= 2018.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-2), dpkg (= 1.19.5), dpkg-dev (= 1.19.5), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-3), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-3), gcc-8-base (= 8.3.0-3), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.13-1), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libapt-pkg5.0 (= 1.8.0), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-3), libatomic1 (= 8.3.0-3), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-2), libaudit1 (= 1:2.8.4-2), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-8), libc-dev-bin (= 2.28-8), libc6 (= 2.28-8), libc6-dev (= 2.28-8), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-3), libcom-err2 (= 1.45.0-1), libcroco3 (= 0.6.12-3), libcurl3-gnutls (= 7.64.0-2), libcurl4-gnutls-dev (= 7.64.0-2), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.248), libdpkg-perl (= 1.19.5), libelf1 (= 0.176-1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-3), libgcc1 (= 1:8.3.0-3), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.6-3), libgomp1 (= 8.3.0-3), libgpg-error0 (= 1.35-1), libgssapi-krb5-2 (= 1.17-2), libhogweed4 (= 3.4.1-1), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.3.0-3), libk5crypto3 (= 1.17-2), libkeyutils1 (= 1.6-6), libkrb5-3 (= 1.17-2), libkrb5support0 (= 1.17-2), libldap-2.4-2 (= 2.4.47+dfsg-3), libldap-common (= 2.4.47+dfsg-3), liblsan0 (= 8.3.0-3), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-3), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libnettle6 (= 3.4.1-1), libnghttp2-14 (= 1.37.0-1), libp11-kit0 (= 0.23.15-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-5), libpipeline1 (= 1.5.1-2), libpsl5 (= 0.20.2-2), libquadmath0 (= 8.3.0-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-2), libsasl2-2 (= 2.1.27+dfsg-1), libsasl2-modules-db (= 2.1.27+dfsg-1), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsemanage-common (= 2.8-2), libsemanage1 (= 2.8-2), libsepol1 (= 2.8-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libssh2-1 (= 1.8.0-2), libssl1.1 (= 1.1.1b-1), libstdc++-8-dev (= 8.3.0-3), libstdc++6 (= 8.3.0-3), libsystemd0 (= 241-2), libtasn1-6 (= 4.13-3), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-3), libubsan1 (= 8.3.0-3), libuchardet0 (= 0.0.6-3), libudev1 (= 241-2), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.28-2), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), passwd (= 1:4.5-1.1), patch (= 2.7.6-3), perl (= 5.28.1-5), perl-base (= 5.28.1-5), perl-modules-5.28 (= 5.28.1-5), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-5), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1546427303" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libstaden-read-dev_1.14.11-6_armel.deb -------------------------------------- new Debian package, version 2.0. size 330148 bytes: control archive=2400 bytes. 778 bytes, 18 lines control 4048 bytes, 62 lines md5sums Package: libstaden-read-dev Source: staden-io-lib Version: 1.14.11-6 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 1099 Depends: libstaden-read13 (= 1.14.11-6), libcurl4-gnutls-dev, zlib1g-dev Section: libdevel Priority: optional Homepage: https://github.com/jkbonfield/io_lib Description: development files for libstaden-read This package contains the header and development files needed to build programs and packages using the Staden io_lib. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/bin/ -rwxr-xr-x root/root 899 2019-01-02 11:08 ./usr/bin/io_lib-config drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/include/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/include/io_lib/ -rw-r--r-- root/root 10263 2019-01-02 11:08 ./usr/include/io_lib/Read.h -rw-r--r-- root/root 2471 2019-01-02 11:08 ./usr/include/io_lib/abi.h -rw-r--r-- root/root 2480 2019-01-02 11:08 ./usr/include/io_lib/alf.h -rw-r--r-- root/root 3536 2019-01-02 11:08 ./usr/include/io_lib/array.h -rw-r--r-- root/root 24731 2019-01-02 11:08 ./usr/include/io_lib/bam.h -rw-r--r-- root/root 2398 2019-01-02 11:08 ./usr/include/io_lib/bgzip.h -rw-r--r-- root/root 2075 2019-01-02 11:08 ./usr/include/io_lib/binning.h -rw-r--r-- root/root 6268 2019-01-02 11:08 ./usr/include/io_lib/compress.h -rw-r--r-- root/root 15348 2019-01-02 11:08 ./usr/include/io_lib/compression.h -rw-r--r-- root/root 2405 2019-01-02 11:08 ./usr/include/io_lib/cram.h -rw-r--r-- root/root 6269 2019-01-02 11:08 ./usr/include/io_lib/cram_codecs.h -rw-r--r-- root/root 3612 2019-01-02 11:08 ./usr/include/io_lib/cram_decode.h -rw-r--r-- root/root 3769 2019-01-02 11:08 ./usr/include/io_lib/cram_encode.h -rw-r--r-- root/root 3365 2019-01-02 11:08 ./usr/include/io_lib/cram_index.h -rw-r--r-- root/root 25847 2019-01-02 11:08 ./usr/include/io_lib/cram_io.h -rw-r--r-- root/root 2481 2019-01-02 11:08 ./usr/include/io_lib/cram_stats.h -rw-r--r-- root/root 30065 2019-01-02 11:08 ./usr/include/io_lib/cram_structs.h -rw-r--r-- root/root 4951 2019-01-02 11:08 ./usr/include/io_lib/deflate_interlaced.h -rw-r--r-- root/root 9589 2019-01-02 11:08 ./usr/include/io_lib/dstring.h -rw-r--r-- root/root 2430 2019-01-02 11:08 ./usr/include/io_lib/error.h -rw-r--r-- root/root 10646 2019-01-02 11:08 ./usr/include/io_lib/expFileIO.h -rw-r--r-- root/root 2392 2019-01-02 11:08 ./usr/include/io_lib/fpoint.h -rw-r--r-- root/root 6952 2019-01-02 11:08 ./usr/include/io_lib/hash_table.h -rw-r--r-- root/root 6146 2019-01-02 11:08 ./usr/include/io_lib/io_lib_config.h -rw-r--r-- root/root 923 2019-01-02 11:08 ./usr/include/io_lib/jenkins_lookup3.h -rw-r--r-- root/root 2969 2019-01-02 11:08 ./usr/include/io_lib/mFILE.h -rw-r--r-- root/root 6459 2019-01-02 11:08 ./usr/include/io_lib/mach-io.h -rw-r--r-- root/root 1479 2019-01-02 11:08 ./usr/include/io_lib/md5.h -rw-r--r-- root/root 6841 2019-01-02 11:08 ./usr/include/io_lib/misc.h -rw-r--r-- root/root 5965 2019-01-02 11:08 ./usr/include/io_lib/open_trace_file.h -rw-r--r-- root/root 10487 2019-01-02 11:08 ./usr/include/io_lib/os.h -rw-r--r-- root/root 4216 2019-01-02 11:08 ./usr/include/io_lib/plain.h -rw-r--r-- root/root 2183 2019-01-02 11:08 ./usr/include/io_lib/pooled_alloc.h -rw-r--r-- root/root 13970 2019-01-02 11:08 ./usr/include/io_lib/sam_header.h -rw-r--r-- root/root 13901 2019-01-02 11:08 ./usr/include/io_lib/scf.h -rw-r--r-- root/root 4238 2019-01-02 11:08 ./usr/include/io_lib/scf_extras.h -rw-r--r-- root/root 8055 2019-01-02 11:08 ./usr/include/io_lib/scram.h -rw-r--r-- root/root 8453 2019-01-02 11:08 ./usr/include/io_lib/seqIOABI.h -rw-r--r-- root/root 3793 2019-01-02 11:08 ./usr/include/io_lib/sff.h -rw-r--r-- root/root 7141 2019-01-02 11:08 ./usr/include/io_lib/srf.h -rw-r--r-- root/root 3350 2019-01-02 11:08 ./usr/include/io_lib/stdio_hack.h -rw-r--r-- root/root 2423 2019-01-02 11:08 ./usr/include/io_lib/string_alloc.h -rw-r--r-- root/root 3253 2019-01-02 11:08 ./usr/include/io_lib/tar_format.h -rw-r--r-- root/root 6759 2019-01-02 11:08 ./usr/include/io_lib/thread_pool.h -rw-r--r-- root/root 5383 2019-01-02 11:08 ./usr/include/io_lib/traceType.h -rw-r--r-- root/root 7365 2019-01-02 11:08 ./usr/include/io_lib/translate.h -rw-r--r-- root/root 3578 2019-01-02 11:08 ./usr/include/io_lib/vlen.h -rw-r--r-- root/root 2562 2019-01-02 11:08 ./usr/include/io_lib/xalloc.h -rw-r--r-- root/root 2118 2019-01-02 11:08 ./usr/include/io_lib/zfio.h -rw-r--r-- root/root 8081 2019-01-02 11:08 ./usr/include/io_lib/ztr.h drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/arm-linux-gnueabi/ -rw-r--r-- root/root 682640 2019-01-02 11:08 ./usr/lib/arm-linux-gnueabi/libstaden-read.a lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/lib/arm-linux-gnueabi/libstaden-read.so -> libstaden-read.so.13.0.1 drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/libstaden-read-dev/ -rw-r--r-- root/root 3150 2019-01-02 11:08 ./usr/share/doc/libstaden-read-dev/changelog.Debian.gz -rw-r--r-- root/root 26606 2018-10-16 09:06 ./usr/share/doc/libstaden-read-dev/changelog.gz -rw-r--r-- root/root 7382 2019-01-01 09:22 ./usr/share/doc/libstaden-read-dev/copyright drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/man3/ -rw-r--r-- root/root 2119 2019-01-02 11:08 ./usr/share/man/man3/ExperimentFile.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/exp2read.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fread_reading.3.gz -> read_reading.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fread_scf.3.gz -> read_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fwrite_reading.3.gz -> write_reading.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fwrite_scf.3.gz -> write_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read2exp.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read2scf.3.gz -> scf2read.3.gz -rw-r--r-- root/root 591 2019-01-02 11:08 ./usr/share/man/man3/read_allocate.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read_deallocate.3.gz -> read_allocate.3.gz -rw-r--r-- root/root 1550 2019-01-02 11:08 ./usr/share/man/man3/read_reading.3.gz -rw-r--r-- root/root 610 2019-01-02 11:08 ./usr/share/man/man3/read_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read_scf_header.3.gz -> read_scf.3.gz -rw-r--r-- root/root 783 2019-01-02 11:08 ./usr/share/man/man3/scf2read.3.gz -rw-r--r-- root/root 804 2019-01-02 11:08 ./usr/share/man/man3/write_reading.3.gz -rw-r--r-- root/root 608 2019-01-02 11:08 ./usr/share/man/man3/write_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/write_scf_header.3.gz -> write_scf.3.gz drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/man4/ lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man4/Read.4.gz -> ../man3/read_reading.3.gz libstaden-read13-dbgsym_1.14.11-6_armel.deb ------------------------------------------- new Debian package, version 2.0. size 678392 bytes: control archive=564 bytes. 424 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libstaden-read13-dbgsym Source: staden-io-lib Version: 1.14.11-6 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 717 Depends: libstaden-read13 (= 1.14.11-6) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libstaden-read13 Build-Ids: 5b151c72e7a45459c0fdad1af8a8aaece740bc7e drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/.build-id/5b/ -rw-r--r-- root/root 723456 2019-01-02 11:08 ./usr/lib/debug/.build-id/5b/151c72e7a45459c0fdad1af8a8aaece740bc7e.debug drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/doc/libstaden-read13-dbgsym -> libstaden-read13 libstaden-read13_1.14.11-6_armel.deb ------------------------------------ new Debian package, version 2.0. size 250704 bytes: control archive=1092 bytes. 928 bytes, 20 lines control 323 bytes, 4 lines md5sums 35 bytes, 1 lines shlibs 67 bytes, 2 lines triggers Package: libstaden-read13 Source: staden-io-lib Version: 1.14.11-6 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 561 Depends: libc6 (>= 2.28), libcurl3-gnutls (>= 7.16.2), zlib1g (>= 1:1.2.3.3) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/jkbonfield/io_lib Description: Staden library for reading and writing DNA sequencing results This package contains the Staden io_lib, that is renamed in Debian and Fedora ‘staden-read’ instead of ‘read’. This library supports various DNA sequence read formats, in particular SCF, ABI, ALF, CTF, ZTR, SFF and SRF. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/arm-linux-gnueabi/ lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/lib/arm-linux-gnueabi/libstaden-read.so.13 -> libstaden-read.so.13.0.1 -rw-r--r-- root/root 524284 2019-01-02 11:08 ./usr/lib/arm-linux-gnueabi/libstaden-read.so.13.0.1 drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/libstaden-read13/ -rw-r--r-- root/root 3150 2019-01-02 11:08 ./usr/share/doc/libstaden-read13/changelog.Debian.gz -rw-r--r-- root/root 26606 2018-10-16 09:06 ./usr/share/doc/libstaden-read13/changelog.gz -rw-r--r-- root/root 7382 2019-01-01 09:22 ./usr/share/doc/libstaden-read13/copyright staden-io-lib-utils-dbgsym_1.14.11-6_armel.deb ---------------------------------------------- new Debian package, version 2.0. size 401984 bytes: control archive=2188 bytes. 1851 bytes, 12 lines control 3816 bytes, 36 lines md5sums Package: staden-io-lib-utils-dbgsym Source: staden-io-lib Version: 1.14.11-6 Auto-Built-Package: debug-symbols Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 648 Depends: staden-io-lib-utils (= 1.14.11-6) Section: debug Priority: optional Description: debug symbols for staden-io-lib-utils Build-Ids: 004931ef59d9dab2002ed0a83166139d4d911640 0eb7affea11e5c6b5246bebed96d39e386c1b582 200dcaa9ba2c88fd7e2ac73be4991c100a55feea 3763a6467b3ae3254e3b34a6f5a975c97492fe55 38c12e6b68dda900ffce5b4316b53fc64f97b256 3f84d0166d17b2086df02250cd0d456659a08f17 42a0daf2a81bc03374fa19e780dd6afddf08b152 431813e03b4017ba00689e49e000a0f1ead8d555 4496e755bd696129df2e8485090a19bda9854329 5a0818e99e601317d12bb607f24ce4b4ef87be44 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./usr/lib/debug/.build-id/ed/ba0b428f8ad36b930b7d951384e52752129c5e.debug drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/.build-id/fd/ -rw-r--r-- root/root 11628 2019-01-02 11:08 ./usr/lib/debug/.build-id/fd/8b1d1785841c8e77f5b32d35faedbd3b04180c.debug drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/.build-id/ff/ -rw-r--r-- root/root 9768 2019-01-02 11:08 ./usr/lib/debug/.build-id/ff/2d7669157d29cec90ca047ec24426a9319a5b7.debug drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/doc/staden-io-lib-utils-dbgsym -> staden-io-lib-utils staden-io-lib-utils_1.14.11-6_armel.deb --------------------------------------- new Debian package, version 2.0. size 158288 bytes: control archive=2212 bytes. 935 bytes, 21 lines control 3197 bytes, 53 lines md5sums Package: staden-io-lib-utils Source: staden-io-lib Version: 1.14.11-6 Architecture: armel Maintainer: Debian Med Packaging Team Installed-Size: 531 Depends: libc6 (>= 2.7), libstaden-read13 Suggests: staden-io-lib-examples Section: science Priority: optional Homepage: https://github.com/jkbonfield/io_lib Description: programs for manipulating DNA sequencing files The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. . This package contains the programs that are distributed with the Staden io_lib for manipulating and converting sequencing data files, and in particular files to maniuplate short reads generated by second and third generation sequencers and stored in SRF format. drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/bin/ -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/append_sff -rwxr-xr-x root/root 17980 2019-01-02 11:08 ./usr/bin/convert_trace -rwxr-xr-x root/root 21916 2019-01-02 11:08 ./usr/bin/cram_dump -rwxr-xr-x root/root 17820 2019-01-02 11:08 ./usr/bin/cram_filter -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/cram_index -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/cram_size -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/extract_fastq -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/extract_qual -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/extract_seq -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/get_comment -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/hash_exp -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/hash_extract -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/hash_list -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/hash_sff -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/hash_tar -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/index_tar -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/makeSCF -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/scf_dump -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/scf_info -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/scf_update -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/scram_flagstat -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/scram_merge -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/scram_pileup -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/scram_test -rwxr-xr-x root/root 17820 2019-01-02 11:08 ./usr/bin/scramble -rwxr-xr-x root/root 5532 2019-01-02 11:08 ./usr/bin/srf2fasta -rwxr-xr-x root/root 17820 2019-01-02 11:08 ./usr/bin/srf2fastq -rwxr-xr-x root/root 26048 2019-01-02 11:08 ./usr/bin/srf_dump_all -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/srf_extract_hash -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/srf_extract_linear -rwxr-xr-x root/root 26068 2019-01-02 11:08 ./usr/bin/srf_filter -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/srf_index_hash -rwxr-xr-x root/root 17888 2019-01-02 11:08 ./usr/bin/srf_info -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/srf_list -rwxr-xr-x root/root 9628 2019-01-02 11:08 ./usr/bin/trace_dump -rwxr-xr-x root/root 13724 2019-01-02 11:08 ./usr/bin/ztr_dump drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc-base/ -rw-r--r-- root/root 304 2019-01-01 09:22 ./usr/share/doc-base/staden-io-lib-hash-file-format -rw-r--r-- root/root 349 2019-01-01 09:22 ./usr/share/doc-base/staden-io-lib-ztr-format drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/staden-io-lib-utils/ -rw-r--r-- root/root 3266 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/Hash_File_Format -rw-r--r-- root/root 4890 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/README.md.gz -rw-r--r-- root/root 20980 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/ZTR_format.gz -rw-r--r-- root/root 3150 2019-01-02 11:08 ./usr/share/doc/staden-io-lib-utils/changelog.Debian.gz -rw-r--r-- root/root 26606 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/changelog.gz -rw-r--r-- root/root 7382 2019-01-01 09:22 ./usr/share/doc/staden-io-lib-utils/copyright drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/man1/ -rw-r--r-- root/root 380 2019-01-02 11:08 ./usr/share/man/man1/append_sff.1.gz -rw-r--r-- root/root 2043 2019-01-02 11:08 ./usr/share/man/man1/scramble.1.gz -rw-r--r-- root/root 358 2019-01-02 11:08 ./usr/share/man/man1/srf2fasta.1.gz -rw-r--r-- root/root 1321 2019-01-02 11:08 ./usr/share/man/man1/srf2fastq.1.gz -rw-r--r-- root/root 836 2019-01-02 11:08 ./usr/share/man/man1/srf_dump_all.1.gz -rw-r--r-- root/root 859 2019-01-02 11:08 ./usr/share/man/man1/srf_filter.1.gz -rw-r--r-- root/root 572 2019-01-02 11:08 ./usr/share/man/man1/srf_index_hash.1.gz -rw-r--r-- root/root 748 2019-01-02 11:08 ./usr/share/man/man1/srf_info.1.gz -rw-r--r-- root/root 804 2019-01-02 11:08 ./usr/share/man/man1/srf_list.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 39460 Build-Time: 96 Distribution: unstable Foreign Architectures: armel Host Architecture: armel Install-Time: 21 Job: staden-io-lib_1.14.11-6 Lintian: pass Machine Architecture: amd64 Package: staden-io-lib Package-Time: 128 Source-Version: 1.14.11-6 Space: 39460 Status: successful Version: 1.14.11-6 -------------------------------------------------------------------------------- Finished at 2019-03-22T10:34:26Z Build needed 00:02:08, 39460k disk space