sbuild (Debian sbuild) 0.73.0 (23 Dec 2016) on gcc131.bak.milne.osuosl.org +==============================================================================+ | staden-io-lib 1.14.11-6 (mipsel) Mon, 03 Jun 2019 11:41:14 +0000 | +==============================================================================+ Package: staden-io-lib Version: 1.14.11-6 Source Version: 1.14.11-6 Distribution: unstable Machine Architecture: amd64 Host Architecture: mipsel Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-4441e4e0-88d1-440a-bbd8-94c221551cda' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [247 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-06-03-0819.48.pdiff [1693 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-06-03-0819.48.pdiff [1051 B] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2019-06-03-0819.48.pdiff [1693 B] Get:6 http://debian.oregonstate.edu/debian unstable/main mipsel Packages [8027 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2019-06-03-0819.48.pdiff [1051 B] Fetched 8333 kB in 2s (4465 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'staden-io-lib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/staden-io-lib.git Please use: git clone https://salsa.debian.org/med-team/staden-io-lib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 3408 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.11-6 (dsc) [2453 B] Get:2 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.11-6 (tar) [3392 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.11-6 (diff) [14.0 kB] Fetched 3408 kB in 0s (43.8 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/staden-io-lib-TIptdY/staden-io-lib-1.14.11' with '<>' I: NOTICE: Log filtering will replace 'build/staden-io-lib-TIptdY' with '<>' +------------------------------------------------------------------------------+ | Install crossbuild-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64 Filtered Build-Depends: build-essential:amd64, fakeroot:amd64, crossbuild-essential-mipsel:amd64 dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-nJxa0w/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-nJxa0w/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nJxa0w/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-nJxa0w/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nJxa0w/apt_archive ./ Sources [363 B] Get:5 copy:/<>/resolver-nJxa0w/apt_archive ./ Packages [453 B] Fetched 1773 B in 0s (95.1 kB/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: binutils-mipsel-linux-gnu cpp-8-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel dpkg-cross file g++-8-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-8-cross-base gcc-8-mipsel-linux-gnu gcc-8-mipsel-linux-gnu-base gcc-mipsel-linux-gnu libatomic1-mipsel-cross libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mipsel-cross libgcc1-mipsel-cross libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mipsel-cross libstdc++6-mipsel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mipsel-cross sensible-utils ucf Suggested packages: binutils-doc gcc-8-locales cpp-doc binutils-multiarch g++-8-multilib-mipsel-linux-gnu gcc-8-doc libstdc++6-8-dbg-mipsel-cross gcc-8-multilib-mipsel-linux-gnu libgcc1-dbg-mipsel-cross libgomp1-dbg-mipsel-cross libitm1-dbg-mipsel-cross libatomic1-dbg-mipsel-cross libasan5-dbg-mipsel-cross liblsan0-dbg-mipsel-cross libtsan0-dbg-mipsel-cross libubsan1-dbg-mipsel-cross libmpx2-dbg-mipsel-cross libquadmath0-dbg-mipsel-cross manpages-dev autoconf automake libtool flex bison gdb-mipsel-linux-gnu gcc-doc libyaml-shell-perl Recommended packages: libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl The following NEW packages will be installed: binutils-mipsel-linux-gnu cpp-8-mipsel-linux-gnu cpp-mipsel-linux-gnu cross-config crossbuild-essential-mipsel dpkg-cross file g++-8-mipsel-linux-gnu g++-mipsel-linux-gnu gcc-8-cross-base gcc-8-mipsel-linux-gnu gcc-8-mipsel-linux-gnu-base gcc-mipsel-linux-gnu libatomic1-mipsel-cross libc6-dev-mipsel-cross libc6-mipsel-cross libconfig-auto-perl libconfig-inifiles-perl libdebian-dpkgcross-perl libfile-homedir-perl libfile-which-perl libgcc-8-dev-mipsel-cross libgcc1-mipsel-cross libgomp1-mipsel-cross libicu63 libio-string-perl liblocale-gettext-perl libmagic-mgc libmagic1 libstdc++-8-dev-mipsel-cross libstdc++6-mipsel-cross libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev-mipsel-cross sbuild-build-depends-core-dummy:mipsel sensible-utils ucf 0 upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 40.0 MB of archives. After this operation, 146 MB of additional disk space will be used. Get:1 copy:/<>/resolver-nJxa0w/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [876 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.35-4 [242 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.35-4 [117 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.35-4 [66.3 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mipsel-linux-gnu amd64 2.31.1-16 [2487 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mipsel-linux-gnu-base amd64 8.3.0-7cross1 [191 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-8-mipsel-linux-gnu amd64 8.3.0-7cross1 [6278 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mipsel-linux-gnu amd64 4:8.3.0-1 [16.5 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3 [39.9 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-cross-base all 8.3.0-7cross1 [186 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mipsel-cross all 2.28-10cross2 [1229 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc1-mipsel-cross all 1:8.3.0-7cross1 [46.0 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mipsel-cross all 8.3.0-7cross1 [69.5 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mipsel-cross all 8.3.0-7cross1 [6692 B] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-8-dev-mipsel-cross all 8.3.0-7cross1 [211 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-8-mipsel-linux-gnu amd64 8.3.0-7cross1 [6691 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mipsel-linux-gnu amd64 4:8.3.0-1 [1452 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mipsel-cross all 8.3.0-7cross1 [311 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mipsel-cross all 4.19.28-2cross2 [1240 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mipsel-cross all 2.28-10cross2 [2320 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-8-dev-mipsel-cross all 8.3.0-7cross1 [1535 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 g++-8-mipsel-linux-gnu amd64 8.3.0-7cross1 [6853 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mipsel-linux-gnu amd64 4:8.3.0-1 [1172 B] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000001-1 [51.9 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libicu63 amd64 63.1-6 [8292 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.4+dfsg1-7+b3 [687 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.00+dfsg-1 [58.6 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-1 [344 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.27-1 [66.8 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3 [38.7 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3 [49.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mipsel all 12.6 [6564 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 40.0 MB in 1s (63.9 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11953 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-3+b4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4_amd64.deb ... Unpacking file (1:5.35-4) ... Selecting previously unselected package ucf. Preparing to unpack .../05-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... 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Preparing to unpack .../37-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../38-libdebian-dpkgcross-perl_2.6.15-3_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../39-dpkg-cross_2.6.15-3_all.deb ... Unpacking dpkg-cross (2.6.15-3) ... Selecting previously unselected package crossbuild-essential-mipsel. Preparing to unpack .../40-crossbuild-essential-mipsel_12.6_all.deb ... Unpacking crossbuild-essential-mipsel (12.6) ... Selecting previously unselected package sbuild-build-depends-core-dummy:mipsel. Preparing to unpack .../41-sbuild-build-depends-core-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-core-dummy:mipsel (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000001-1) ... Setting up libfile-which-perl (1.23-1) ... Setting up libmagic-mgc (1:5.35-4) ... Setting up gcc-8-cross-base (8.3.0-7cross1) ... Setting up libmagic1:amd64 (1:5.35-4) ... Setting up libc6-mipsel-cross (2.28-10cross2) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up libatomic1-mipsel-cross (8.3.0-7cross1) ... Setting up file (1:5.35-4) ... Setting up libyaml-perl (1.27-1) ... Setting up libicu63:amd64 (63.1-6) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up cross-config (2.6.15-3) ... Setting up libgcc1-mipsel-cross (1:8.3.0-7cross1) ... Setting up binutils-mipsel-linux-gnu (2.31.1-16) ... Setting up libgomp1-mipsel-cross (8.3.0-7cross1) ... Setting up gcc-8-mipsel-linux-gnu-base:amd64 (8.3.0-7cross1) ... Setting up linux-libc-dev-mipsel-cross (4.19.28-2cross2) ... Setting up sensible-utils (0.0.12) ... Setting up cpp-8-mipsel-linux-gnu (8.3.0-7cross1) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libgcc-8-dev-mipsel-cross (8.3.0-7cross1) ... Setting up libc6-dev-mipsel-cross (2.28-10cross2) ... Setting up libstdc++6-mipsel-cross (8.3.0-7cross1) ... Setting up cpp-mipsel-linux-gnu (4:8.3.0-1) ... Setting up ucf (3.0038+nmu1) ... Setting up libstdc++-8-dev-mipsel-cross (8.3.0-7cross1) ... Setting up gcc-8-mipsel-linux-gnu (8.3.0-7cross1) ... Setting up libxml-sax-perl (1.00+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mipsel-linux-gnu (4:8.3.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-8-mipsel-linux-gnu (8.3.0-7cross1) ... Setting up g++-mipsel-linux-gnu (4:8.3.0-1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3) ... Setting up dpkg-cross (2.6.15-3) ... Setting up crossbuild-essential-mipsel (12.6) ... Setting up sbuild-build-depends-core-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mipsel included in any all) Setup apt archive ----------------- dpkg-deb: building package 'sbuild-build-depends-essential-dummy' in '/<>/resolver-nJxa0w/apt_archive/sbuild-build-depends-essential-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-nJxa0w/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nJxa0w/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-nJxa0w/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nJxa0w/apt_archive ./ Sources [482 B] Get:5 copy:/<>/resolver-nJxa0w/apt_archive ./ Packages [571 B] Fetched 2016 B in 0s (113 kB/s) Reading package lists... Reading package lists... Install essential build dependencies (apt-based resolver) --------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following NEW packages will be installed: sbuild-build-depends-essential-dummy:mipsel 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 844 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-nJxa0w/apt_archive ./ sbuild-build-depends-essential-dummy 0.invalid.0 [844 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 844 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-essential-dummy:mipsel. (Reading database ... 15127 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-essential-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-essential-dummy:mipsel (0.invalid.0) ... Setting up sbuild-build-depends-essential-dummy:mipsel (0.invalid.0) ... +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), zlib1g-dev, libcurl4-gnutls-dev | libcurl4-nss-dev, d-shlibs Filtered Build-Depends: libc-dev, libstdc++-dev, debhelper (>= 11~), zlib1g-dev, libcurl4-gnutls-dev, d-shlibs dpkg-deb: building package 'sbuild-build-depends-staden-io-lib-dummy' in '/<>/resolver-nJxa0w/apt_archive/sbuild-build-depends-staden-io-lib-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-staden-io-lib-dummy dpkg-scanpackages: info: Wrote 3 entries to output Packages file. Ign:1 copy:/<>/resolver-nJxa0w/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nJxa0w/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-nJxa0w/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nJxa0w/apt_archive ./ Sources [670 B] Get:5 copy:/<>/resolver-nJxa0w/apt_archive ./ Packages [746 B] Fetched 2379 B in 0s (121 kB/s) Reading package lists... Reading package lists... Install staden-io-lib build dependencies (apt-based resolver) ------------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mipsel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libbsd0 libc6:mipsel libc6-dev:mipsel libcom-err2:mipsel libcroco3 libcurl3-gnutls:mipsel libcurl4-gnutls-dev:mipsel libdb5.3:mipsel libelf1 libffi6:mipsel libfile-stripnondeterminism-perl libgcc-8-dev:mipsel libgcc1:mipsel libgcrypt20:mipsel libglib2.0-0 libgmp10:mipsel libgnutls30:mipsel libgomp1:mipsel libgpg-error0:mipsel libgssapi-krb5-2:mipsel libhogweed4:mipsel libidn2-0:mipsel libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel libldap-2.4-2:mipsel libldap-common libncurses6 libnettle6:mipsel libnghttp2-14:mipsel libp11-kit0:mipsel libpipeline1 libpsl5:mipsel librtmp1:mipsel libsasl2-2:mipsel libsasl2-modules-db:mipsel libsigsegv2 libssh2-1:mipsel libssl1.1:mipsel libstdc++-8-dev:mipsel libstdc++6:mipsel libtasn1-6:mipsel libtool libuchardet0 libunistring2:mipsel linux-libc-dev:mipsel m4 man-db po-debconf zlib1g:mipsel zlib1g-dev:mipsel Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mipsel libc-l10n:mipsel locales:mipsel manpages-dev:mipsel libcurl4-doc:mipsel libgnutls28-dev:mipsel libidn11-dev:mipsel libkrb5-dev:mipsel libldap2-dev:mipsel librtmp-dev:mipsel libssh2-1-dev:mipsel pkg-config:mipsel rng-tools:mipsel gnutls-bin:mipsel krb5-doc:mipsel krb5-user:mipsel libstdc++-8-doc:mipsel libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx ca-certificates:mipsel libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:mipsel krb5-locales:mipsel libgpm2 publicsuffix:mipsel libsasl2-modules:mipsel libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dwz gcc-8-base:mipsel gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mipsel libbsd0 libc6:mipsel libc6-dev:mipsel libcom-err2:mipsel libcroco3 libcurl3-gnutls:mipsel libcurl4-gnutls-dev:mipsel libdb5.3:mipsel libelf1 libffi6:mipsel libfile-stripnondeterminism-perl libgcc-8-dev:mipsel libgcc1:mipsel libgcrypt20:mipsel libglib2.0-0 libgmp10:mipsel libgnutls30:mipsel libgomp1:mipsel libgpg-error0:mipsel libgssapi-krb5-2:mipsel libhogweed4:mipsel libidn2-0:mipsel libk5crypto3:mipsel libkeyutils1:mipsel libkrb5-3:mipsel libkrb5support0:mipsel libldap-2.4-2:mipsel libldap-common libncurses6 libnettle6:mipsel libnghttp2-14:mipsel libp11-kit0:mipsel libpipeline1 libpsl5:mipsel librtmp1:mipsel libsasl2-2:mipsel libsasl2-modules-db:mipsel libsigsegv2 libssh2-1:mipsel libssl1.1:mipsel libstdc++-8-dev:mipsel libstdc++6:mipsel libtasn1-6:mipsel libtool libuchardet0 libunistring2:mipsel linux-libc-dev:mipsel m4 man-db po-debconf sbuild-build-depends-staden-io-lib-dummy:mipsel zlib1g:mipsel zlib1g-dev:mipsel 0 upgraded, 70 newly installed, 0 to remove and 0 not upgraded. Need to get 25.3 MB of archives. After this operation, 100 MB of additional disk space will be used. Get:1 copy:/<>/resolver-nJxa0w/apt_archive ./ sbuild-build-depends-staden-io-lib-dummy 0.invalid.0 [904 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 libbsd0 amd64 0.9.1-2 [99.5 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-3 [916 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-2 [203 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11 [341 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.1-4 [771 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.84 [17.2 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-10 [547 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.12-3 [78.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.58.3-1 [1258 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.1+20181013-2 [102 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 12.1.1 [1016 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main mipsel gcc-8-base mipsel 8.3.0-7 [191 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc1 mipsel 1:8.3.0-7 [45.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main mipsel libc6 mipsel 2.28-10 [2429 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main mipsel libatomic1 mipsel 8.3.0-7 [6692 B] Get:34 http://debian.oregonstate.edu/debian unstable/main mipsel linux-libc-dev mipsel 4.19.37-3 [1178 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main mipsel libc6-dev mipsel 2.28-10 [2322 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main mipsel libcom-err2 mipsel 1.45.1-3 [69.2 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main mipsel libgmp10 mipsel 2:6.1.2+dfsg-4 [222 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main mipsel libnettle6 mipsel 3.4.1-1 [238 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main mipsel libhogweed4 mipsel 3.4.1-1 [133 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main mipsel libunistring2 mipsel 0.9.10-1 [365 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main mipsel libidn2-0 mipsel 2.0.5-1 [75.2 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main mipsel libffi6 mipsel 3.2.1-9 [18.9 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main mipsel libp11-kit0 mipsel 0.23.15-2 [265 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main mipsel libtasn1-6 mipsel 4.13-3 [50.3 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main mipsel libgnutls30 mipsel 3.6.7-3 [989 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main mipsel libkeyutils1 mipsel 1.6-6 [14.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main mipsel libkrb5support0 mipsel 1.17-2 [64.6 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main mipsel libk5crypto3 mipsel 1.17-2 [125 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main mipsel libssl1.1 mipsel 1.1.1c-1 [1175 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main mipsel libkrb5-3 mipsel 1.17-2 [341 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main mipsel libgssapi-krb5-2 mipsel 1.17-2 [143 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main mipsel libdb5.3 mipsel 5.3.28+dfsg1-0.6 [598 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main mipsel libsasl2-modules-db mipsel 2.1.27+dfsg-1 [68.1 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main mipsel libsasl2-2 mipsel 2.1.27+dfsg-1 [101 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.47+dfsg-3 [89.4 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main mipsel libldap-2.4-2 mipsel 2.4.47+dfsg-3 [203 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main mipsel libnghttp2-14 mipsel 1.37.0-1 [80.7 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main mipsel libpsl5 mipsel 0.20.2-2 [53.3 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g mipsel 1:1.2.11.dfsg-1 [90.3 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main mipsel librtmp1 mipsel 2.4+20151223.gitfa8646d.1-2 [55.7 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main mipsel libgpg-error0 mipsel 1.35-1 [68.6 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main mipsel libgcrypt20 mipsel 1.8.4-5 [536 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main mipsel libssh2-1 mipsel 1.8.0-2.1 [134 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main mipsel libcurl3-gnutls mipsel 7.64.0-3 [311 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main mipsel libcurl4-gnutls-dev mipsel 7.64.0-3 [430 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main mipsel libgomp1 mipsel 8.3.0-7 [70.9 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main mipsel libgcc-8-dev mipsel 8.3.0-7 [210 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++6 mipsel 8.3.0-7 [349 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main mipsel libstdc++-8-dev mipsel 8.3.0-7 [1552 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main mipsel zlib1g-dev mipsel 1:1.2.11.dfsg-1 [213 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 25.3 MB in 0s (55.3 MB/s) Selecting previously unselected package libbsd0:amd64. (Reading database ... 15127 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_amd64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../13-d-shlibs_0.84_all.deb ... Unpacking d-shlibs (0.84) ... Selecting previously unselected package libtool. Preparing to unpack .../14-libtool_2.4.6-10_all.deb ... Unpacking libtool (2.4.6-10) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../15-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../16-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../17-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../18-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../19-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../20-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../21-libglib2.0-0_2.58.3-1_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-1) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../22-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../23-libncurses6_6.1+20181013-2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2) ... Selecting previously unselected package gettext. Preparing to unpack .../24-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../25-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../26-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../27-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package gcc-8-base:mipsel. Preparing to unpack .../28-gcc-8-base_8.3.0-7_mipsel.deb ... Unpacking gcc-8-base:mipsel (8.3.0-7) ... Selecting previously unselected package libgcc1:mipsel. Preparing to unpack .../29-libgcc1_1%3a8.3.0-7_mipsel.deb ... Unpacking libgcc1:mipsel (1:8.3.0-7) ... Selecting previously unselected package libc6:mipsel. Preparing to unpack .../30-libc6_2.28-10_mipsel.deb ... Unpacking libc6:mipsel (2.28-10) ... Selecting previously unselected package libatomic1:mipsel. Preparing to unpack .../31-libatomic1_8.3.0-7_mipsel.deb ... Unpacking libatomic1:mipsel (8.3.0-7) ... Selecting previously unselected package linux-libc-dev:mipsel. Preparing to unpack .../32-linux-libc-dev_4.19.37-3_mipsel.deb ... Unpacking linux-libc-dev:mipsel (4.19.37-3) ... Selecting previously unselected package libc6-dev:mipsel. Preparing to unpack .../33-libc6-dev_2.28-10_mipsel.deb ... Unpacking libc6-dev:mipsel (2.28-10) ... Selecting previously unselected package libcom-err2:mipsel. Preparing to unpack .../34-libcom-err2_1.45.1-3_mipsel.deb ... Unpacking libcom-err2:mipsel (1.45.1-3) ... Selecting previously unselected package libgmp10:mipsel. Preparing to unpack .../35-libgmp10_2%3a6.1.2+dfsg-4_mipsel.deb ... Unpacking libgmp10:mipsel (2:6.1.2+dfsg-4) ... Selecting previously unselected package libnettle6:mipsel. Preparing to unpack .../36-libnettle6_3.4.1-1_mipsel.deb ... Unpacking libnettle6:mipsel (3.4.1-1) ... Selecting previously unselected package libhogweed4:mipsel. Preparing to unpack .../37-libhogweed4_3.4.1-1_mipsel.deb ... Unpacking libhogweed4:mipsel (3.4.1-1) ... Selecting previously unselected package libunistring2:mipsel. Preparing to unpack .../38-libunistring2_0.9.10-1_mipsel.deb ... Unpacking libunistring2:mipsel (0.9.10-1) ... Selecting previously unselected package libidn2-0:mipsel. Preparing to unpack .../39-libidn2-0_2.0.5-1_mipsel.deb ... Unpacking libidn2-0:mipsel (2.0.5-1) ... Selecting previously unselected package libffi6:mipsel. Preparing to unpack .../40-libffi6_3.2.1-9_mipsel.deb ... Unpacking libffi6:mipsel (3.2.1-9) ... Selecting previously unselected package libp11-kit0:mipsel. Preparing to unpack .../41-libp11-kit0_0.23.15-2_mipsel.deb ... Unpacking libp11-kit0:mipsel (0.23.15-2) ... Selecting previously unselected package libtasn1-6:mipsel. Preparing to unpack .../42-libtasn1-6_4.13-3_mipsel.deb ... Unpacking libtasn1-6:mipsel (4.13-3) ... Selecting previously unselected package libgnutls30:mipsel. Preparing to unpack .../43-libgnutls30_3.6.7-3_mipsel.deb ... Unpacking libgnutls30:mipsel (3.6.7-3) ... Selecting previously unselected package libkeyutils1:mipsel. Preparing to unpack .../44-libkeyutils1_1.6-6_mipsel.deb ... Unpacking libkeyutils1:mipsel (1.6-6) ... Selecting previously unselected package libkrb5support0:mipsel. Preparing to unpack .../45-libkrb5support0_1.17-2_mipsel.deb ... Unpacking libkrb5support0:mipsel (1.17-2) ... Selecting previously unselected package libk5crypto3:mipsel. Preparing to unpack .../46-libk5crypto3_1.17-2_mipsel.deb ... Unpacking libk5crypto3:mipsel (1.17-2) ... Selecting previously unselected package libssl1.1:mipsel. Preparing to unpack .../47-libssl1.1_1.1.1c-1_mipsel.deb ... Unpacking libssl1.1:mipsel (1.1.1c-1) ... Selecting previously unselected package libkrb5-3:mipsel. Preparing to unpack .../48-libkrb5-3_1.17-2_mipsel.deb ... Unpacking libkrb5-3:mipsel (1.17-2) ... Selecting previously unselected package libgssapi-krb5-2:mipsel. 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Unpacking libldap-2.4-2:mipsel (2.4.47+dfsg-3) ... Selecting previously unselected package libnghttp2-14:mipsel. Preparing to unpack .../55-libnghttp2-14_1.37.0-1_mipsel.deb ... Unpacking libnghttp2-14:mipsel (1.37.0-1) ... Selecting previously unselected package libpsl5:mipsel. Preparing to unpack .../56-libpsl5_0.20.2-2_mipsel.deb ... Unpacking libpsl5:mipsel (0.20.2-2) ... Selecting previously unselected package zlib1g:mipsel. Preparing to unpack .../57-zlib1g_1%3a1.2.11.dfsg-1_mipsel.deb ... Unpacking zlib1g:mipsel (1:1.2.11.dfsg-1) ... Selecting previously unselected package librtmp1:mipsel. Preparing to unpack .../58-librtmp1_2.4+20151223.gitfa8646d.1-2_mipsel.deb ... Unpacking librtmp1:mipsel (2.4+20151223.gitfa8646d.1-2) ... Selecting previously unselected package libgpg-error0:mipsel. Preparing to unpack .../59-libgpg-error0_1.35-1_mipsel.deb ... Unpacking libgpg-error0:mipsel (1.35-1) ... Selecting previously unselected package libgcrypt20:mipsel. Preparing to unpack .../60-libgcrypt20_1.8.4-5_mipsel.deb ... Unpacking libgcrypt20:mipsel (1.8.4-5) ... Selecting previously unselected package libssh2-1:mipsel. Preparing to unpack .../61-libssh2-1_1.8.0-2.1_mipsel.deb ... Unpacking libssh2-1:mipsel (1.8.0-2.1) ... Selecting previously unselected package libcurl3-gnutls:mipsel. Preparing to unpack .../62-libcurl3-gnutls_7.64.0-3_mipsel.deb ... Unpacking libcurl3-gnutls:mipsel (7.64.0-3) ... Selecting previously unselected package libcurl4-gnutls-dev:mipsel. Preparing to unpack .../63-libcurl4-gnutls-dev_7.64.0-3_mipsel.deb ... Unpacking libcurl4-gnutls-dev:mipsel (7.64.0-3) ... Selecting previously unselected package libgomp1:mipsel. Preparing to unpack .../64-libgomp1_8.3.0-7_mipsel.deb ... Unpacking libgomp1:mipsel (8.3.0-7) ... Selecting previously unselected package libgcc-8-dev:mipsel. Preparing to unpack .../65-libgcc-8-dev_8.3.0-7_mipsel.deb ... Unpacking libgcc-8-dev:mipsel (8.3.0-7) ... Selecting previously unselected package libstdc++6:mipsel. Preparing to unpack .../66-libstdc++6_8.3.0-7_mipsel.deb ... Unpacking libstdc++6:mipsel (8.3.0-7) ... Selecting previously unselected package libstdc++-8-dev:mipsel. Preparing to unpack .../67-libstdc++-8-dev_8.3.0-7_mipsel.deb ... Unpacking libstdc++-8-dev:mipsel (8.3.0-7) ... Selecting previously unselected package zlib1g-dev:mipsel. Preparing to unpack .../68-zlib1g-dev_1%3a1.2.11.dfsg-1_mipsel.deb ... Unpacking zlib1g-dev:mipsel (1:1.2.11.dfsg-1) ... Selecting previously unselected package sbuild-build-depends-staden-io-lib-dummy:mipsel. Preparing to unpack .../69-sbuild-build-depends-staden-io-lib-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-staden-io-lib-dummy:mipsel (0.invalid.0) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-1) ... No schema files found: doing nothing. Setting up linux-libc-dev:mipsel (4.19.37-3) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libldap-common (2.4.47+dfsg-3) ... Setting up autotools-dev (20180224.1) ... Setting up libncurses6:amd64 (6.1+20181013-2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up gcc-8-base:mipsel (8.3.0-7) ... Setting up autopoint (0.19.8.1-9) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up d-shlibs (0.84) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libbsd0:amd64 (0.9.1-2) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libtool (2.4.6-10) ... Setting up m4 (1.4.18-2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libc6:mipsel (2.28-10) ... Setting up libtasn1-6:mipsel (4.13-3) ... Setting up libc6-dev:mipsel (2.28-10) ... Setting up libdb5.3:mipsel (5.3.28+dfsg1-0.6) ... Setting up libkeyutils1:mipsel (1.6-6) ... Setting up libgpg-error0:mipsel (1.35-1) ... Setting up libgcc1:mipsel (1:8.3.0-7) ... Setting up libssl1.1:mipsel (1.1.1c-1) ... Setting up libnghttp2-14:mipsel (1.37.0-1) ... Setting up libunistring2:mipsel (0.9.10-1) ... Setting up libgcrypt20:mipsel (1.8.4-5) ... Setting up zlib1g:mipsel (1:1.2.11.dfsg-1) ... Setting up libffi6:mipsel (3.2.1-9) ... Setting up libidn2-0:mipsel (2.0.5-1) ... Setting up libcom-err2:mipsel (1.45.1-3) ... Setting up libgomp1:mipsel (8.3.0-7) ... Setting up libkrb5support0:mipsel (1.17-2) ... Setting up libsasl2-modules-db:mipsel (2.1.27+dfsg-1) ... Setting up dh-autoreconf (19) ... Setting up libgmp10:mipsel (2:6.1.2+dfsg-4) ... Setting up libp11-kit0:mipsel (0.23.15-2) ... Setting up libatomic1:mipsel (8.3.0-7) ... Setting up libk5crypto3:mipsel (1.17-2) ... Setting up libnettle6:mipsel (3.4.1-1) ... Setting up libgcc-8-dev:mipsel (8.3.0-7) ... Setting up libsasl2-2:mipsel (2.1.27+dfsg-1) ... Setting up zlib1g-dev:mipsel (1:1.2.11.dfsg-1) ... Setting up libssh2-1:mipsel (1.8.0-2.1) ... Setting up libkrb5-3:mipsel (1.17-2) ... Setting up libstdc++6:mipsel (8.3.0-7) ... Setting up libstdc++-8-dev:mipsel (8.3.0-7) ... Setting up libpsl5:mipsel (0.20.2-2) ... Setting up libhogweed4:mipsel (3.4.1-1) ... Setting up debhelper (12.1.1) ... Setting up libgnutls30:mipsel (3.6.7-3) ... Setting up librtmp1:mipsel (2.4+20151223.gitfa8646d.1-2) ... Setting up libgssapi-krb5-2:mipsel (1.17-2) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up libldap-2.4-2:mipsel (2.4.47+dfsg-3) ... Setting up libcurl3-gnutls:mipsel (7.64.0-3) ... Setting up libcurl4-gnutls-dev:mipsel (7.64.0-3) ... Setting up sbuild-build-depends-staden-io-lib-dummy:mipsel (0.invalid.0) ... Processing triggers for libc-bin (2.28-10) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.9.0-8-amd64 amd64 (x86_64) Toolchain package versions: binutils_2.31.1-16 dpkg-dev_1.19.6 g++-8_8.3.0-7 gcc-8_8.3.0-7 libc6-dev_2.28-10 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-mipsel-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-mipsel-cross_8.3.0-7cross1 linux-libc-dev_4.19.37-3 Package versions: adduser_3.118 apt_1.8.2 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.3 base-passwd_3.5.46 bash_5.0-4 binutils_2.31.1-16 binutils-common_2.31.1-16 binutils-mipsel-linux-gnu_2.31.1-16 binutils-x86-64-linux-gnu_2.31.1-16 bsdmainutils_11.1.2+b1 bsdutils_1:2.33.1-0.1 build-essential_12.6 bzip2_1.0.6-9 coreutils_8.30-3 cpp_4:8.3.0-1 cpp-8_8.3.0-7 cpp-8-mipsel-linux-gnu_8.3.0-7cross1 cpp-mipsel-linux-gnu_4:8.3.0-1 cross-config_2.6.15-3 crossbuild-essential-mipsel_12.6 d-shlibs_0.84 dash_0.5.10.2-5 debconf_1.5.72 debhelper_12.1.1 debian-archive-keyring_2019.1 debianutils_4.8.6.1 dh-autoreconf_19 dh-strip-nondeterminism_1.1.2-1 diffutils_1:3.7-3 dpkg_1.19.6 dpkg-cross_2.6.15-3 dpkg-dev_1.19.6 dwz_0.12-3 e2fsprogs_1.45.1-3 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.35-4 findutils_4.6.0+git+20190209-2 g++_4:8.3.0-1 g++-8_8.3.0-7 g++-8-mipsel-linux-gnu_8.3.0-7cross1 g++-mipsel-linux-gnu_4:8.3.0-1 gcc_4:8.3.0-1 gcc-8_8.3.0-7 gcc-8-base_8.3.0-7 gcc-8-cross-base_8.3.0-7cross1 gcc-8-mipsel-linux-gnu_8.3.0-7cross1 gcc-8-mipsel-linux-gnu-base_8.3.0-7cross1 gcc-mipsel-linux-gnu_4:8.3.0-1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 gpgv_2.2.13-2 grep_3.3-1 groff-base_1.22.4-3 gzip_1.9-3 hostname_3.21 init-system-helpers_1.56+nmu1 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-4 libapt-pkg5.0_1.8.2 libarchive-zip-perl_1.64-1 libasan5_8.3.0-7 libatomic1_8.3.0-7 libatomic1-mipsel-cross_8.3.0-7cross1 libattr1_1:2.4.48-4 libaudit-common_1:2.8.4-3 libaudit1_1:2.8.4-3 libbinutils_2.31.1-16 libblkid1_2.33.1-0.1 libbsd0_0.9.1-2 libbz2-1.0_1.0.6-9 libc-bin_2.28-10 libc-dev-bin_2.28-10 libc6_2.28-10 libc6-dev_2.28-10 libc6-dev-mipsel-cross_2.28-10cross2 libc6-mipsel-cross_2.28-10cross2 libcap-ng0_0.7.9-2 libcc1-0_8.3.0-7 libcom-err2_1.45.1-3 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000001-1 libcroco3_0.6.12-3 libcurl3-gnutls_7.64.0-3 libcurl4-gnutls-dev_7.64.0-3 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.249 libdebian-dpkgcross-perl_2.6.15-3 libdpkg-perl_1.19.6 libelf1_0.176-1.1 libext2fs2_1.45.1-3 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi6_3.2.1-9 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.1.2-1 libfile-which-perl_1.23-1 libgcc-8-dev_8.3.0-7 libgcc-8-dev-mipsel-cross_8.3.0-7cross1 libgcc1_1:8.3.0-7 libgcc1-mipsel-cross_1:8.3.0-7cross1 libgcrypt20_1.8.4-5 libgdbm-compat4_1.18.1-4 libgdbm6_1.18.1-4 libglib2.0-0_2.58.3-1 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.7-3 libgomp1_8.3.0-7 libgomp1-mipsel-cross_8.3.0-7cross1 libgpg-error0_1.35-1 libgssapi-krb5-2_1.17-2 libhogweed4_3.4.1-1 libicu63_63.1-6 libidn2-0_2.0.5-1 libio-string-perl_1.08-3 libisl19_0.20-2 libitm1_8.3.0-7 libk5crypto3_1.17-2 libkeyutils1_1.6-6 libkrb5-3_1.17-2 libkrb5support0_1.17-2 libldap-2.4-2_2.4.47+dfsg-3 libldap-common_2.4.47+dfsg-3 liblocale-gettext-perl_1.07-3+b4 liblsan0_8.3.0-7 liblz4-1_1.8.3-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.35-4 libmagic1_1:5.35-4 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.3.0-7 libncurses6_6.1+20181013-2 libncursesw6_6.1+20181013-2 libnettle6_3.4.1-1 libnghttp2-14_1.37.0-1 libp11-kit0_0.23.15-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre3_2:8.39-12 libperl5.28_5.28.1-6 libpipeline1_1.5.1-2 libpsl5_0.20.2-2 libquadmath0_8.3.0-7 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libseccomp2_2.3.3-4 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsmartcols1_2.33.1-0.1 libss2_1.45.1-3 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1c-1 libstdc++-8-dev_8.3.0-7 libstdc++-8-dev-mipsel-cross_8.3.0-7cross1 libstdc++6_8.3.0-7 libstdc++6-mipsel-cross_8.3.0-7cross1 libsystemd0_241-5 libtasn1-6_4.13-3 libtinfo6_6.1+20181013-2 libtool_2.4.6-10 libtsan0_8.3.0-7 libubsan1_8.3.0-7 libuchardet0_0.0.6-3 libudev1_241-5 libunistring2_0.9.10-1 libuuid1_2.33.1-0.1 libxml-libxml-perl_2.0134+dfsg-1 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.00+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.4+dfsg1-7+b3 libyaml-perl_1.27-1 libzstd1_1.3.8+dfsg-3 linux-libc-dev_4.19.37-3 linux-libc-dev-mipsel-cross_4.19.28-2cross2 login_1:4.5-1.1 m4_1.4.18-2 make_4.2.1-1.2 man-db_2.8.5-2 mawk_1.3.3-17+b3 mount_2.33.1-0.1 ncurses-base_6.1+20181013-2 ncurses-bin_6.1+20181013-2 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-6 perl-base_5.28.1-6 perl-modules-5.28_5.28.1-6 po-debconf_1.0.21 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-essential-dummy_0.invalid.0 sbuild-build-depends-staden-io-lib-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sysvinit-utils_2.93-8 tar_1.30+dfsg-6 tzdata_2019a-1 ucf_3.0038+nmu1 util-linux_2.33.1-0.1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-1 zlib1g-dev_1:1.2.11.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Jan 2 11:09:19 2019 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./staden-io-lib_1.14.11-6.dsc dpkg-source: info: extracting staden-io-lib in /<> dpkg-source: info: unpacking staden-io-lib_1.14.11.orig.tar.gz dpkg-source: info: unpacking staden-io-lib_1.14.11-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying pathmax.patch dpkg-source: info: applying fix_fseeko.patch dpkg-source: info: applying fix_non_x86.patch dpkg-source: info: applying remove_bashism.patch dpkg-source: info: applying d4591b5.patch dpkg-source: info: applying 37b33d3.patch dpkg-source: info: applying 1b28b6a.patch dpkg-source: info: applying 242cd6b.patch dpkg-source: info: applying serial-tests.patch dpkg-source: info: applying spelling Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mipsel DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=POSIX LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-4441e4e0-88d1-440a-bbd8-94c221551cda SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package staden-io-lib dpkg-buildpackage: info: source version 1.14.11-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type mipsel-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mipsel fakeroot debian/rules clean dh clean --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -f tests/.done tests/data/ce\#sorted.sam tests/data/ce\#unsorted.sam ## ## Try to verify correct ABI version right in the beginning ## Strangely enough d-shlibmove fails in detecting it in this package ## Since upstream build system creates libstaden-read.so.11.1.0 this code is not ## activated but it should be considered in case of future problems with ABI version ## #UPSTREAMABI=`grep ^VERS_CURRENT configure.in | sed 's/^VERS_CURRENT[[:space:]]*=\([0-9]\+\)[[:space:]]*/\1/'` ; \ #DEBABI=`grep '^Package: libstaden-read[0-9]\+' debian/control | sed 's/Package: libstaden-read\([0-9]\+\)/\1/'` ; \ #if [ ${UPSTREAMABI} -ne ${DEBABI} ] ; then \ # echo "Upstream has bumped ABI to ${UPSTREAMABI} but Debian is using libstaden-read${DEBABI} (see bug #710225)" ; \ # exit 1 ; \ #fi make[1]: Leaving directory '/<>' dh_clean debian/rules build-arch dh build-arch --no-parallel dh_update_autotools_config -a dh_autoreconf -a aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' configure.in:65: installing './compile' configure.in:67: installing './config.guess' configure.in:67: installing './config.sub' configure.in:5: installing './install-sh' configure.in:5: installing './missing' io_lib/Makefile.am:152: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') automake: warning: autoconf input should be named 'configure.ac', not 'configure.in' io_lib/Makefile.am: installing './depcomp' progs/Makefile.am:150: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') tests/Makefile.am:59: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS') dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/mipsel-linux-gnu --libexecdir=\${prefix}/lib/mipsel-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mipsel-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.mipsel checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mipsel-linux-gnu-strip... mipsel-linux-gnu-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for mipsel-linux-gnu-gcc... mipsel-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mipsel-linux-gnu-gcc accepts -g... yes checking for mipsel-linux-gnu-gcc option to accept ISO C89... none needed checking whether mipsel-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mipsel-linux-gnu-gcc... none checking build system type... x86_64-pc-linux-gnu checking host system type... mipsel-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mipsel-linux-gnu-gcc... /usr/mipsel-linux-gnu/bin/ld checking if the linker (/usr/mipsel-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/mipsel-linux-gnu-nm -B checking the name lister (/usr/bin/mipsel-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to mipsel-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/mipsel-linux-gnu/bin/ld option to reload object files... -r checking for mipsel-linux-gnu-objdump... mipsel-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for mipsel-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for mipsel-linux-gnu-ar... mipsel-linux-gnu-ar checking for archiver @FILE support... @ checking for mipsel-linux-gnu-strip... (cached) mipsel-linux-gnu-strip checking for mipsel-linux-gnu-ranlib... mipsel-linux-gnu-ranlib checking command to parse /usr/bin/mipsel-linux-gnu-nm -B output from mipsel-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mipsel-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mipsel-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mipsel-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for mipsel-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if mipsel-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if mipsel-linux-gnu-gcc static flag -static works... yes checking if mipsel-linux-gnu-gcc supports -c -o file.o... yes checking if mipsel-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the mipsel-linux-gnu-gcc linker (/usr/mipsel-linux-gnu/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for grep that handles long lines and -e... (cached) /bin/grep checking for C compiler warning flags... -Wall checking for gawk... (cached) mawk checking for curl-config... /usr/bin/curl-config checking for the version of libcurl... 7.64.0 checking whether libcurl just needs -lcurl... yes checking whether libcurl is usable... yes checking for curl_free... yes checking for inflateEnd in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for library containing gethostbyname... none required checking for library containing socket... none required checking for BZ2_bzBuffToBuffCompress in -lbz2... no checking for lzma_easy_buffer_encode in -llzma... no checking for bsc_compress in -lbsc... no checking whether byte ordering is bigendian... (cached) no checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for unistd.h... (cached) yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for zlib.h... (cached) yes checking stdio_ext.h usability... yes checking stdio_ext.h presence... yes checking for stdio_ext.h... yes checking whether byte ordering is bigendian... (cached) no checking size of short... 2 checking size of int... (cached) 4 checking size of long... (cached) 4 checking for inline... inline checking for mode_t... yes checking for fileno... yes checking for fstat... yes checking for mallopt... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... 64 checking for _LARGEFILE_SOURCE value needed for large files... no checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... no checking for library containing pthread_join... -lpthread checking for library containing cos... -lm checking for strdup... yes checking for fsync... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating io_lib/Makefile config.status: creating progs/Makefile config.status: creating tests/Makefile config.status: creating io_lib-config config.status: creating io_lib/os.h config.status: creating io_lib_config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in io_lib make[3]: Entering directory '/<>/io_lib' /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo './'`Read.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Read.c -fPIC -DPIC -o .libs/libstaden_read_la-Read.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Read.c -o libstaden_read_la-Read.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -o libstaden_read_la-scf_extras.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -fPIC -DPIC -o .libs/libstaden_read_la-translate.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -o libstaden_read_la-translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo './'`compression.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c compression.c -fPIC -DPIC -o .libs/libstaden_read_la-compression.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c compression.c -o libstaden_read_la-compression.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo './'`ztr.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr.c -o libstaden_read_la-ztr.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo './'`ztr_translate.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -o libstaden_read_la-ztr_translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c deflate_interlaced.c -fPIC -DPIC -o .libs/libstaden_read_la-deflate_interlaced.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c deflate_interlaced.c -o libstaden_read_la-deflate_interlaced.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo './'`fpoint.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fpoint.c -fPIC -DPIC -o .libs/libstaden_read_la-fpoint.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fpoint.c -o libstaden_read_la-fpoint.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo './'`seqIOABI.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOABI.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOABI.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOABI.c -o libstaden_read_la-seqIOABI.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo './'`seqIOALF.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOALF.c -fPIC -DPIC -o 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-Werror=format-security -c bgzip.c -fPIC -DPIC -o .libs/libstaden_read_la-bgzip.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bgzip.c -o libstaden_read_la-bgzip.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-tokenise_name3.lo `test -f 'tokenise_name3.c' || echo './'`tokenise_name3.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c tokenise_name3.c -fPIC -DPIC -o .libs/libstaden_read_la-tokenise_name3.o tokenise_name3.c: In function 'decode_names': tokenise_name3.c:1508:52: warning: passing argument 4 of 'uncompress' from incompatible pointer type [-Wincompatible-pointer-types] clen = uncompress(&in[o], sz-o, ctx->desc[i].buf, &ctx->desc[i].buf_a); ^~~~~~~~~~~~~~~~~~~ tokenise_name3.c:1179:77: note: expected 'uint64_t *' {aka 'long long unsigned int *'} but argument is of type 'size_t *' {aka 'unsigned int *'} static int uncompress(uint8_t *in, uint64_t in_len, uint8_t *out, uint64_t *out_len) { ~~~~~~~~~~^~~~~~~ libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c tokenise_name3.c -o libstaden_read_la-tokenise_name3.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-fqzcomp_qual.lo `test -f 'fqzcomp_qual.c' || echo './'`fqzcomp_qual.c libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fqzcomp_qual.c -fPIC -DPIC -o .libs/libstaden_read_la-fqzcomp_qual.o libtool: compile: mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fqzcomp_qual.c -o libstaden_read_la-fqzcomp_qual.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 13:1:0 -Wl,-z,relro -Wl,-z,now -o libstaden-read.la -rpath /usr/lib/mipsel-linux-gnu libstaden_read_la-Read.lo libstaden_read_la-scf_extras.lo libstaden_read_la-translate.lo libstaden_read_la-compression.lo libstaden_read_la-ztr.lo libstaden_read_la-ztr_translate.lo libstaden_read_la-deflate_interlaced.lo libstaden_read_la-fpoint.lo libstaden_read_la-seqIOABI.lo libstaden_read_la-seqIOALF.lo libstaden_read_la-expFileIO.lo libstaden_read_la-seqIOPlain.lo libstaden_read_la-misc_scf.lo libstaden_read_la-read_scf.lo libstaden_read_la-write_scf.lo libstaden_read_la-sff.lo libstaden_read_la-srf.lo libstaden_read_la-array.lo libstaden_read_la-compress.lo libstaden_read_la-error.lo libstaden_read_la-files.lo libstaden_read_la-find.lo libstaden_read_la-mach-io.lo libstaden_read_la-open_trace_file.lo libstaden_read_la-read_alloc.lo libstaden_read_la-strings.lo libstaden_read_la-traceType.lo libstaden_read_la-xalloc.lo libstaden_read_la-vlen.lo libstaden_read_la-hash_table.lo libstaden_read_la-jenkins_lookup3.lo libstaden_read_la-mFILE.lo libstaden_read_la-pooled_alloc.lo libstaden_read_la-bam.lo libstaden_read_la-sam_header.lo libstaden_read_la-rANS_static.lo libstaden_read_la-rANS_static4x16pr.lo libstaden_read_la-cram_codecs.lo libstaden_read_la-cram_encode.lo libstaden_read_la-cram_decode.lo libstaden_read_la-cram_stats.lo libstaden_read_la-cram_io.lo libstaden_read_la-cram_index.lo libstaden_read_la-zfio.lo libstaden_read_la-dstring.lo libstaden_read_la-string_alloc.lo libstaden_read_la-md5.lo libstaden_read_la-crc32.lo libstaden_read_la-scram.lo libstaden_read_la-thread_pool.lo libstaden_read_la-binning.lo libstaden_read_la-cram_bambam.lo libstaden_read_la-bgzip.lo libstaden_read_la-tokenise_name3.lo libstaden_read_la-fqzcomp_qual.lo -lz -lcurl -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -shared -fPIC -DPIC .libs/libstaden_read_la-Read.o .libs/libstaden_read_la-scf_extras.o .libs/libstaden_read_la-translate.o .libs/libstaden_read_la-compression.o .libs/libstaden_read_la-ztr.o .libs/libstaden_read_la-ztr_translate.o .libs/libstaden_read_la-deflate_interlaced.o .libs/libstaden_read_la-fpoint.o .libs/libstaden_read_la-seqIOABI.o .libs/libstaden_read_la-seqIOALF.o .libs/libstaden_read_la-expFileIO.o .libs/libstaden_read_la-seqIOPlain.o .libs/libstaden_read_la-misc_scf.o .libs/libstaden_read_la-read_scf.o .libs/libstaden_read_la-write_scf.o .libs/libstaden_read_la-sff.o .libs/libstaden_read_la-srf.o .libs/libstaden_read_la-array.o .libs/libstaden_read_la-compress.o .libs/libstaden_read_la-error.o .libs/libstaden_read_la-files.o .libs/libstaden_read_la-find.o .libs/libstaden_read_la-mach-io.o .libs/libstaden_read_la-open_trace_file.o .libs/libstaden_read_la-read_alloc.o .libs/libstaden_read_la-strings.o .libs/libstaden_read_la-traceType.o .libs/libstaden_read_la-xalloc.o .libs/libstaden_read_la-vlen.o .libs/libstaden_read_la-hash_table.o .libs/libstaden_read_la-jenkins_lookup3.o .libs/libstaden_read_la-mFILE.o .libs/libstaden_read_la-pooled_alloc.o .libs/libstaden_read_la-bam.o .libs/libstaden_read_la-sam_header.o .libs/libstaden_read_la-rANS_static.o .libs/libstaden_read_la-rANS_static4x16pr.o .libs/libstaden_read_la-cram_codecs.o .libs/libstaden_read_la-cram_encode.o .libs/libstaden_read_la-cram_decode.o .libs/libstaden_read_la-cram_stats.o .libs/libstaden_read_la-cram_io.o .libs/libstaden_read_la-cram_index.o .libs/libstaden_read_la-zfio.o .libs/libstaden_read_la-dstring.o .libs/libstaden_read_la-string_alloc.o .libs/libstaden_read_la-md5.o .libs/libstaden_read_la-crc32.o .libs/libstaden_read_la-scram.o .libs/libstaden_read_la-thread_pool.o .libs/libstaden_read_la-binning.o .libs/libstaden_read_la-cram_bambam.o .libs/libstaden_read_la-bgzip.o .libs/libstaden_read_la-tokenise_name3.o .libs/libstaden_read_la-fqzcomp_qual.o -lz /usr/lib/mipsel-linux-gnu/libcurl-gnutls.so -lm -lpthread -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libstaden-read.so.13 -o .libs/libstaden-read.so.13.0.1 libtool: link: (cd ".libs" && rm -f "libstaden-read.so.13" && ln -s "libstaden-read.so.13.0.1" "libstaden-read.so.13") libtool: link: (cd ".libs" && rm -f "libstaden-read.so" && ln -s "libstaden-read.so.13.0.1" "libstaden-read.so") libtool: link: mipsel-linux-gnu-ar cru .libs/libstaden-read.a libstaden_read_la-Read.o libstaden_read_la-scf_extras.o libstaden_read_la-translate.o libstaden_read_la-compression.o libstaden_read_la-ztr.o libstaden_read_la-ztr_translate.o libstaden_read_la-deflate_interlaced.o libstaden_read_la-fpoint.o libstaden_read_la-seqIOABI.o libstaden_read_la-seqIOALF.o libstaden_read_la-expFileIO.o libstaden_read_la-seqIOPlain.o libstaden_read_la-misc_scf.o libstaden_read_la-read_scf.o libstaden_read_la-write_scf.o libstaden_read_la-sff.o libstaden_read_la-srf.o libstaden_read_la-array.o libstaden_read_la-compress.o libstaden_read_la-error.o libstaden_read_la-files.o libstaden_read_la-find.o libstaden_read_la-mach-io.o libstaden_read_la-open_trace_file.o libstaden_read_la-read_alloc.o libstaden_read_la-strings.o libstaden_read_la-traceType.o libstaden_read_la-xalloc.o libstaden_read_la-vlen.o libstaden_read_la-hash_table.o libstaden_read_la-jenkins_lookup3.o libstaden_read_la-mFILE.o libstaden_read_la-pooled_alloc.o libstaden_read_la-bam.o libstaden_read_la-sam_header.o libstaden_read_la-rANS_static.o libstaden_read_la-rANS_static4x16pr.o libstaden_read_la-cram_codecs.o libstaden_read_la-cram_encode.o libstaden_read_la-cram_decode.o libstaden_read_la-cram_stats.o libstaden_read_la-cram_io.o libstaden_read_la-cram_index.o libstaden_read_la-zfio.o libstaden_read_la-dstring.o libstaden_read_la-string_alloc.o libstaden_read_la-md5.o libstaden_read_la-crc32.o libstaden_read_la-scram.o libstaden_read_la-thread_pool.o libstaden_read_la-binning.o libstaden_read_la-cram_bambam.o libstaden_read_la-bgzip.o libstaden_read_la-tokenise_name3.o libstaden_read_la-fqzcomp_qual.o mipsel-linux-gnu-ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: mipsel-linux-gnu-ranlib .libs/libstaden-read.a libtool: link: ( cd ".libs" && rm -f "libstaden-read.la" && ln -s "../libstaden-read.la" "libstaden-read.la" ) make[3]: Leaving directory '/<>/io_lib' Making all in progs make[3]: Entering directory '/<>/progs' mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o convert_trace.o convert_trace.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o convert_trace convert_trace.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/convert_trace convert_trace.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o makeSCF.o makeSCF.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o makeSCF makeSCF.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/makeSCF makeSCF.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract_seq.o extract_seq.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o extract_seq extract_seq.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extract_seq extract_seq.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract_qual.o extract_qual.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o extract_qual extract_qual.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extract_qual extract_qual.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o extract_fastq.o extract_fastq.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o extract_fastq extract_fastq.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/extract_fastq extract_fastq.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o index_tar.o index_tar.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o index_tar index_tar.o -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o index_tar index_tar.o -lm -lpthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scf_dump.o scf_dump.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scf_dump scf_dump.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scf_dump scf_dump.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scf_info.o scf_info.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scf_info scf_info.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scf_info scf_info.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong 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-Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_pileup scram_pileup.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_flagstat.o scram_flagstat.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_flagstat scram_flagstat.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_flagstat scram_flagstat.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_test.o scram_test.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_test scram_test.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_test scram_test.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_size.o cram_size.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_size cram_size.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_size cram_size.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_filter.o cram_filter.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_filter cram_filter.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_filter cram_filter.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread make[3]: Leaving directory '/<>/progs' Making all in tests make[3]: Entering directory '/<>/tests' mipsel-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_io_test.o cram_io_test.c /bin/bash ../libtool --tag=CC --mode=link mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_io_test cram_io_test.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mipsel-linux-gnu-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_io_test cram_io_test.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread make[3]: Leaving directory '/<>/tests' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --no-parallel dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in io_lib make[2]: Entering directory '/<>/io_lib' make[3]: Entering directory '/<>/io_lib' /bin/mkdir -p '/<>/debian/tmp/usr/lib/mipsel-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libstaden-read.la '/<>/debian/tmp/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/libstaden-read.so.13.0.1 /<>/debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.so.13.0.1 libtool: install: (cd /<>/debian/tmp/usr/lib/mipsel-linux-gnu && { ln -s -f libstaden-read.so.13.0.1 libstaden-read.so.13 || { rm -f libstaden-read.so.13 && ln -s libstaden-read.so.13.0.1 libstaden-read.so.13; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/mipsel-linux-gnu && { ln -s -f libstaden-read.so.13.0.1 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.13.0.1 libstaden-read.so; }; }) libtool: install: /usr/bin/install -c .libs/libstaden-read.lai /<>/debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.la libtool: install: /usr/bin/install -c .libs/libstaden-read.a /<>/debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.a libtool: install: mipsel-linux-gnu-ranlib /<>/debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.a libtool: warning: remember to run 'libtool --finish /usr/lib/mipsel-linux-gnu' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/io_lib' make[2]: Leaving directory '/<>/io_lib' Making install in progs make[2]: Entering directory '/<>/progs' make[3]: Entering directory '/<>/progs' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c convert_trace makeSCF extract_seq extract_qual extract_fastq index_tar scf_dump scf_info scf_update get_comment hash_tar hash_extract hash_list trace_dump hash_sff append_sff ztr_dump srf_dump_all srf_index_hash srf_extract_linear srf_extract_hash srf2fastq srf2fasta srf_filter srf_info srf_list hash_exp cram_dump cram_index scramble scram_merge scram_pileup scram_flagstat scram_test cram_size cram_filter '/<>/debian/tmp/usr/bin' libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/convert_trace /<>/debian/tmp/usr/bin/convert_trace libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/makeSCF /<>/debian/tmp/usr/bin/makeSCF libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/extract_seq /<>/debian/tmp/usr/bin/extract_seq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/extract_qual /<>/debian/tmp/usr/bin/extract_qual libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/extract_fastq /<>/debian/tmp/usr/bin/extract_fastq libtool: install: /usr/bin/install -c index_tar /<>/debian/tmp/usr/bin/index_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scf_dump /<>/debian/tmp/usr/bin/scf_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scf_info /<>/debian/tmp/usr/bin/scf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scf_update /<>/debian/tmp/usr/bin/scf_update libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/get_comment /<>/debian/tmp/usr/bin/get_comment libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_tar /<>/debian/tmp/usr/bin/hash_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_extract /<>/debian/tmp/usr/bin/hash_extract libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_list /<>/debian/tmp/usr/bin/hash_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/trace_dump /<>/debian/tmp/usr/bin/trace_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_sff /<>/debian/tmp/usr/bin/hash_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/append_sff /<>/debian/tmp/usr/bin/append_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/ztr_dump /<>/debian/tmp/usr/bin/ztr_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_dump_all /<>/debian/tmp/usr/bin/srf_dump_all libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_index_hash /<>/debian/tmp/usr/bin/srf_index_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_extract_linear /<>/debian/tmp/usr/bin/srf_extract_linear libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_extract_hash /<>/debian/tmp/usr/bin/srf_extract_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf2fastq /<>/debian/tmp/usr/bin/srf2fastq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf2fasta /<>/debian/tmp/usr/bin/srf2fasta libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_filter /<>/debian/tmp/usr/bin/srf_filter libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_info /<>/debian/tmp/usr/bin/srf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_list /<>/debian/tmp/usr/bin/srf_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_exp /<>/debian/tmp/usr/bin/hash_exp libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_dump /<>/debian/tmp/usr/bin/cram_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_index /<>/debian/tmp/usr/bin/cram_index libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scramble /<>/debian/tmp/usr/bin/scramble libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_merge /<>/debian/tmp/usr/bin/scram_merge libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_pileup /<>/debian/tmp/usr/bin/scram_pileup libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_flagstat /<>/debian/tmp/usr/bin/scram_flagstat libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_test /<>/debian/tmp/usr/bin/scram_test libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_size /<>/debian/tmp/usr/bin/cram_size libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mipsel-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_filter /<>/debian/tmp/usr/bin/cram_filter make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/progs' make[2]: Leaving directory '/<>/progs' Making install in tests make[2]: Entering directory '/<>/tests' make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/tests' make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c io_lib-config '/<>/debian/tmp/usr/bin' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 man/man1/srf_index_hash.1 man/man1/srf_info.1 man/man1/srf_list.1 man/man1/srf2fasta.1 man/man1/srf2fastq.1 man/man1/scramble.1 '/<>/debian/tmp/usr/share/man/man1' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man3' /usr/bin/install -c -m 644 man/man3/read_scf_header.3 man/man3/read_allocate.3 man/man3/ExperimentFile.3 man/man3/write_reading.3 man/man3/write_scf.3 man/man3/read_deallocate.3 man/man3/fwrite_reading.3 man/man3/read2scf.3 man/man3/scf2read.3 man/man3/fwrite_scf.3 man/man3/write_scf_header.3 man/man3/read_reading.3 man/man3/read_scf.3 man/man3/exp2read.3 man/man3/fread_reading.3 man/man3/read2exp.3 man/man3/fread_scf.3 '/<>/debian/tmp/usr/share/man/man3' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man4' /usr/bin/install -c -m 644 man/man4/Read.4 '/<>/debian/tmp/usr/share/man/man4' /bin/mkdir -p '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/Read.h io_lib/scf_extras.h io_lib/translate.h io_lib/abi.h io_lib/fpoint.h io_lib/seqIOABI.h io_lib/alf.h io_lib/expFileIO.h io_lib/plain.h io_lib/scf.h io_lib/sff.h io_lib/array.h io_lib/compress.h io_lib/error.h io_lib/mach-io.h io_lib/misc.h io_lib/open_trace_file.h io_lib/tar_format.h io_lib/traceType.h io_lib/xalloc.h io_lib/mFILE.h io_lib/stdio_hack.h io_lib/vlen.h io_lib/hash_table.h io_lib/jenkins_lookup3.h io_lib/os.h io_lib/compression.h io_lib/ztr.h io_lib/deflate_interlaced.h io_lib/srf.h io_lib/pooled_alloc.h io_lib/cram.h io_lib/cram_structs.h io_lib/cram_io.h io_lib/cram_encode.h io_lib/cram_decode.h io_lib/cram_codecs.h io_lib/cram_index.h io_lib/cram_stats.h io_lib/zfio.h '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/scram.h io_lib/bam.h io_lib/sam_header.h io_lib/dstring.h io_lib/string_alloc.h io_lib_config.h io_lib/md5.h io_lib/thread_pool.h io_lib/binning.h io_lib/bgzip.h '/<>/debian/tmp/usr/include/io_lib' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' dh_install -a mkdir -p /<>/debian/libstaden-read-dev/usr/bin mv /<>/debian/staden-io-lib-utils/usr/bin/io_lib-config /<>/debian/libstaden-read-dev/usr/bin # # Call d-shlibmove to comply with library packaging guide d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev "debian/tmp/usr/include" usr \ debian/tmp/usr/lib/*/libstaden-read.so Library package automatic movement utility --> libcurl4-gnutls-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libstaden-read-dev/usr/lib/mipsel-linux-gnu install -d -m 755 debian/libstaden-read13/usr/lib/mipsel-linux-gnu mv debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.a debian/libstaden-read-dev/usr/lib/mipsel-linux-gnu mv debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.so debian/libstaden-read-dev/usr/lib/mipsel-linux-gnu mv /<>/debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.so.13 debian/libstaden-read13/usr/lib/mipsel-linux-gnu mv /<>/debian/tmp/usr/lib/mipsel-linux-gnu/libstaden-read.so.13.0.1 debian/libstaden-read13/usr/lib/mipsel-linux-gnu PKGDEV=libstaden-read-dev PKGSHL=libstaden-read13 install -d -m 755 debian/libstaden-read-dev/usr mv debian/tmp/usr/include debian/libstaden-read-dev/usr # # make sure io_lib-config --libs will not return -pie (see #825461) find debian/*/usr/bin -name io_lib-config -exec sed -i -e 's/ *-fPIE//' -e 's/ *-pie//' \{\} \; #dh_installman # manpages need some post editing but in case it could be automated, this code would help # mkdir -p # help2man --no-discard-stderr --no-info --help-option='""' \ # --name='filter SRF files for various purposes' \ # --version-string="" \ # /<>/debian//usr/bin/srf_filter > /srf_filter.1 make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'staden-io-lib-utils' in '../staden-io-lib-utils_1.14.11-6_mipsel.deb'. dpkg-deb: building package 'staden-io-lib-utils-dbgsym' in '../staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb'. dpkg-deb: building package 'libstaden-read-dev' in '../libstaden-read-dev_1.14.11-6_mipsel.deb'. dpkg-deb: building package 'libstaden-read13' in '../libstaden-read13_1.14.11-6_mipsel.deb'. dpkg-deb: building package 'libstaden-read13-dbgsym' in '../libstaden-read13-dbgsym_1.14.11-6_mipsel.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../staden-io-lib_1.14.11-6_mipsel.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2019-06-03T11:43:50Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/resolver-nJxa0w/apt_archive/sbuild-build-depends-lintian-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-essential-dummy sbuild-build-depends-lintian-dummy sbuild-build-depends-staden-io-lib-dummy dpkg-scanpackages: info: Wrote 4 entries to output Packages file. Ign:1 copy:/<>/resolver-nJxa0w/apt_archive ./ InRelease Get:2 copy:/<>/resolver-nJxa0w/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-nJxa0w/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-nJxa0w/apt_archive ./ Sources [789 B] Get:5 copy:/<>/resolver-nJxa0w/apt_archive ./ Packages [859 B] Fetched 2611 B in 0s (131 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common t1utils Suggested packages: libdata-dump-perl ca-certificates libhtml-template-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libcgi-fast-perl libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libdigest-bubblebabble-perl libnet-dns-sec-perl libnet-libidn-perl libauthen-sasl-perl libunicode-utf8-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libcapture-tiny-perl libcgi-pm-perl libclass-accessor-perl libclone-perl libdigest-hmac-perl libemail-valid-perl libexporter-tiny-perl libfile-basedir-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libio-async-perl libio-pty-perl libio-socket-ssl-perl libipc-run-perl libipc-system-simple-perl liblist-moreutils-perl libmailtools-perl libnet-dns-perl libnet-domain-tld-perl libnet-ip-perl libnet-smtp-ssl-perl libnet-ssleay-perl libparse-debianchangelog-perl libpath-tiny-perl libreadline7 libsqlite3-0 libssl1.1 libstruct-dumb-perl libsub-name-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl liburi-perl libyaml-0-2 libyaml-libyaml-perl lintian netbase patchutils perl-openssl-defaults readline-common sbuild-build-depends-lintian-dummy:mipsel t1utils 0 upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 7773 kB of archives. After this operation, 20.8 MB of additional disk space will be used. Get:1 copy:/<>/resolver-nJxa0w/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 netbase all 5.6 [19.4 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 readline-common all 7.0-5 [70.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.62-1 [33.4 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.2-1 [49.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.13-2 [512 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.27.2-2 [640 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.13-2 [866 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.34+b1 [71.2 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libcgi-pm-perl all 4.40-1 [222 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.21-1+b3 [13.6 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-accessor-perl all 0.51-1 [23.2 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.41-1+b1 [14.6 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libdigest-hmac-perl all 1.03+dfsg-2 [10.6 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3000-2 [42.2 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libssl1.1 amd64 1.1.1c-1 [1535 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-smtp-ssl-perl all 1.04-1 [6184 B] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libmailtools-perl all 2.18-1 [88.5 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ip-perl all 1.26-2 [29.0 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-dns-perl all 1.19-1 [372 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1 [33.3 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-valid-perl all 1.202-1 [23.0 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002001-1 [36.9 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.25-4 [26.5 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.08-1 [17.7 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libfuture-perl all 0.39-1 [74.5 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libstruct-dumb-perl all 0.09-1 [11.1 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libio-async-perl all 0.72-1 [262 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 libio-pty-perl amd64 1:1.08-1.1+b5 [33.7 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run-perl all 20180523.0-1 [101 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl amd64 0.416-1+b4 [64.2 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libparse-debianchangelog-perl all 1.2.0-13 [59.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.108-1 [53.3 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshtein-perl all 0.13-1 [11.1 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.1-1 [47.2 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.76+repack-1 [33.1 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.3.4-2 [90.4 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.15.0 [1181 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7773 kB in 0s (36.4 MB/s) Selecting previously unselected package netbase. (Reading database ... 18047 files and directories currently installed.) Preparing to unpack .../00-netbase_5.6_all.deb ... Unpacking netbase (5.6) ... Selecting previously unselected package readline-common. Preparing to unpack .../01-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.62-1_amd64.deb ... Unpacking diffstat (1.62-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.2-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.2-1) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../04-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package gpgconf. Preparing to unpack .../05-gpgconf_2.2.13-2_amd64.deb ... Unpacking gpgconf (2.2.13-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../06-libsqlite3-0_3.27.2-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.27.2-2) ... Selecting previously unselected package gpg. Preparing to unpack .../07-gpg_2.2.13-2_amd64.deb ... Unpacking gpg (2.2.13-2) ... Selecting previously unselected package libapt-pkg-perl. Preparing to unpack .../08-libapt-pkg-perl_0.1.34+b1_amd64.deb ... Unpacking libapt-pkg-perl (0.1.34+b1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../09-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../10-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../11-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. 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Unpacking libnet-smtp-ssl-perl (1.04-1) ... Selecting previously unselected package libmailtools-perl. Preparing to unpack .../24-libmailtools-perl_2.18-1_all.deb ... Unpacking libmailtools-perl (2.18-1) ... Selecting previously unselected package libnet-ip-perl. Preparing to unpack .../25-libnet-ip-perl_1.26-2_all.deb ... Unpacking libnet-ip-perl (1.26-2) ... Selecting previously unselected package libnet-dns-perl. Preparing to unpack .../26-libnet-dns-perl_1.19-1_all.deb ... Unpacking libnet-dns-perl (1.19-1) ... Selecting previously unselected package libnet-domain-tld-perl. Preparing to unpack .../27-libnet-domain-tld-perl_1.75-1_all.deb ... Unpacking libnet-domain-tld-perl (1.75-1) ... Selecting previously unselected package libemail-valid-perl. Preparing to unpack .../28-libemail-valid-perl_1.202-1_all.deb ... Unpacking libemail-valid-perl (1.202-1) ... Selecting previously unselected package libexporter-tiny-perl. 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Preparing to unpack .../40-libtext-levenshtein-perl_0.13-1_all.deb ... Unpacking libtext-levenshtein-perl (0.13-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../41-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libyaml-0-2:amd64. Preparing to unpack .../42-libyaml-0-2_0.2.1-1_amd64.deb ... Unpacking libyaml-0-2:amd64 (0.2.1-1) ... Selecting previously unselected package libyaml-libyaml-perl. Preparing to unpack .../43-libyaml-libyaml-perl_0.76+repack-1_amd64.deb ... Unpacking libyaml-libyaml-perl (0.76+repack-1) ... Selecting previously unselected package patchutils. Preparing to unpack .../44-patchutils_0.3.4-2_amd64.deb ... Unpacking patchutils (0.3.4-2) ... Selecting previously unselected package t1utils. Preparing to unpack .../45-t1utils_1.41-3_amd64.deb ... Unpacking t1utils (1.41-3) ... Selecting previously unselected package lintian. Preparing to unpack .../46-lintian_2.15.0_all.deb ... Unpacking lintian (2.15.0) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:mipsel. Preparing to unpack .../47-sbuild-build-depends-lintian-dummy_0.invalid.0_mipsel.deb ... Unpacking sbuild-build-depends-lintian-dummy:mipsel (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.34+b1) ... Setting up libstruct-dumb-perl (0.09-1) ... Setting up libio-pty-perl (1:1.08-1.1+b5) ... Setting up libclone-perl (0.41-1+b1) ... Setting up libyaml-0-2:amd64 (0.2.1-1) ... Setting up libssl1.1:amd64 (1.1.1c-1) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up libsqlite3-0:amd64 (3.27.2-2) ... Setting up libfuture-perl (0.39-1) ... Setting up libyaml-libyaml-perl (0.76+repack-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up libtext-levenshtein-perl (0.13-1) ... Setting up libassuan0:amd64 (2.5.2-1) ... Setting up libio-async-perl (0.72-1) ... Setting up patchutils (0.3.4-2) ... Setting up libdigest-hmac-perl (1.03+dfsg-2) ... Setting up libipc-system-simple-perl (1.25-4) ... Setting up libnet-domain-tld-perl (1.75-1) ... Setting up t1utils (1.41-3) ... Setting up diffstat (1.62-1) ... Setting up libipc-run-perl (20180523.0-1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libsub-name-perl (0.21-1+b3) ... Setting up libpath-tiny-perl (0.108-1) ... Setting up netbase (5.6) ... Setting up libexporter-tiny-perl (1.002001-1) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up libnet-ip-perl (1.26-2) ... Setting up readline-common (7.0-5) ... Setting up liburi-perl (1.76-1) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b4) ... Setting up libnet-dns-perl (1.19-1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up gpgconf (2.2.13-2) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up gpg (2.2.13-2) ... Setting up libcgi-pm-perl (4.40-1) ... Setting up libnet-smtp-ssl-perl (1.04-1) ... Setting up libmailtools-perl (2.18-1) ... Setting up libparse-debianchangelog-perl (1.2.0-13) ... Setting up libemail-valid-perl (1.202-1) ... Setting up lintian (2.15.0) ... Setting up sbuild-build-depends-lintian-dummy:mipsel (0.invalid.0) ... Processing triggers for man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.28-10) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ staden-io-lib_1.14.11-6_mipsel.changes: --------------------------------------- Format: 1.8 Date: Wed, 02 Jan 2019 03:08:23 -0800 Source: staden-io-lib Binary: libstaden-read-dev libstaden-read13 libstaden-read13-dbgsym staden-io-lib-utils staden-io-lib-utils-dbgsym Built-For-Profiles: cross nocheck Architecture: mipsel Version: 1.14.11-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libstaden-read-dev - development files for libstaden-read libstaden-read13 - Staden library for reading and writing DNA sequencing results staden-io-lib-utils - programs for manipulating DNA sequencing files Closes: 916262 Changes: staden-io-lib (1.14.11-6) unstable; urgency=medium . * Switch to -O0 on armhf, mips. Closes: #916262 * Standards-Version: 4.3.0 * debian/control: mark staden-io-lib-examples as Multi-Arch: foreign * changelog & debian/patches/spelling: typo fix (independent) Checksums-Sha1: da24d12e7940b23243c3612d717d6e2da4ac3441 378264 libstaden-read-dev_1.14.11-6_mipsel.deb 5ef2de3332719b02d4de656eee472e911b472d4c 702672 libstaden-read13-dbgsym_1.14.11-6_mipsel.deb b33ada2d5b2e4997670a21fd81656cb2e4e7ae3b 270260 libstaden-read13_1.14.11-6_mipsel.deb e3426910218681506c37edc7ed8aaf3364eb1907 400296 staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb 75ebc1d47ea0274146c5736f14437989766e62f2 167672 staden-io-lib-utils_1.14.11-6_mipsel.deb b3d8897137cf90bcf304bc9761d3a09b861904e3 6423 staden-io-lib_1.14.11-6_mipsel.buildinfo Checksums-Sha256: a88dbf760518fd5c0a00fa5a43dbc45292dffbc369e51f05c26be6b5d7548afb 378264 libstaden-read-dev_1.14.11-6_mipsel.deb 3608e8d1d60c3ea477fa21b754e457d1524d35e50561114bd2494ade33e68737 702672 libstaden-read13-dbgsym_1.14.11-6_mipsel.deb 81f9770a1d3ad9872f372d2247721371c758b670f4453cbc7deacf5ea7917ece 270260 libstaden-read13_1.14.11-6_mipsel.deb 079228e80573713a7ca6dd0d41cab3c6546c14dbd7b86b3015098c1078b86755 400296 staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb dd402cf4c722184701bb84e859aa8542bf94ee5a390bdce192cd423e44339c2f 167672 staden-io-lib-utils_1.14.11-6_mipsel.deb 40ec7c9c6cf5cd4a1c409bceae4bf341e39133888a03a6f420b5709a20fed11b 6423 staden-io-lib_1.14.11-6_mipsel.buildinfo Files: 5b584ae83982888000772a563c08dd66 378264 libdevel optional libstaden-read-dev_1.14.11-6_mipsel.deb 04f50d742219257f66289e066d26e981 702672 debug optional libstaden-read13-dbgsym_1.14.11-6_mipsel.deb bd4e5a8f62dfe3cc50d568c72e45896d 270260 libs optional libstaden-read13_1.14.11-6_mipsel.deb a7b73e27a5f6588a961f4d5d89f5e4d5 400296 debug optional staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb 885a476afdc44f0d38ef66364648c42e 167672 science optional staden-io-lib-utils_1.14.11-6_mipsel.deb d9025891a5b3c7574eb9b5ff92b4c336 6423 science optional staden-io-lib_1.14.11-6_mipsel.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: staden-io-lib Binary: staden-io-lib-utils libstaden-read-dev libstaden-read13 staden-io-lib-examples Architecture: mipsel Version: 1.14.11-6 Checksums-Md5: 5b584ae83982888000772a563c08dd66 378264 libstaden-read-dev_1.14.11-6_mipsel.deb 04f50d742219257f66289e066d26e981 702672 libstaden-read13-dbgsym_1.14.11-6_mipsel.deb bd4e5a8f62dfe3cc50d568c72e45896d 270260 libstaden-read13_1.14.11-6_mipsel.deb a7b73e27a5f6588a961f4d5d89f5e4d5 400296 staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb 885a476afdc44f0d38ef66364648c42e 167672 staden-io-lib-utils_1.14.11-6_mipsel.deb Checksums-Sha1: da24d12e7940b23243c3612d717d6e2da4ac3441 378264 libstaden-read-dev_1.14.11-6_mipsel.deb 5ef2de3332719b02d4de656eee472e911b472d4c 702672 libstaden-read13-dbgsym_1.14.11-6_mipsel.deb b33ada2d5b2e4997670a21fd81656cb2e4e7ae3b 270260 libstaden-read13_1.14.11-6_mipsel.deb e3426910218681506c37edc7ed8aaf3364eb1907 400296 staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb 75ebc1d47ea0274146c5736f14437989766e62f2 167672 staden-io-lib-utils_1.14.11-6_mipsel.deb Checksums-Sha256: a88dbf760518fd5c0a00fa5a43dbc45292dffbc369e51f05c26be6b5d7548afb 378264 libstaden-read-dev_1.14.11-6_mipsel.deb 3608e8d1d60c3ea477fa21b754e457d1524d35e50561114bd2494ade33e68737 702672 libstaden-read13-dbgsym_1.14.11-6_mipsel.deb 81f9770a1d3ad9872f372d2247721371c758b670f4453cbc7deacf5ea7917ece 270260 libstaden-read13_1.14.11-6_mipsel.deb 079228e80573713a7ca6dd0d41cab3c6546c14dbd7b86b3015098c1078b86755 400296 staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb dd402cf4c722184701bb84e859aa8542bf94ee5a390bdce192cd423e44339c2f 167672 staden-io-lib-utils_1.14.11-6_mipsel.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Mon, 03 Jun 2019 11:43:49 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 1.8.2), autoconf (= 2.69-11), automake (= 1:1.16.1-4), autopoint (= 0.19.8.1-9), autotools-dev (= 20180224.1), base-files (= 10.3), base-passwd (= 3.5.46), bash (= 5.0-4), binutils (= 2.31.1-16), binutils-common (= 2.31.1-16), binutils-x86-64-linux-gnu (= 2.31.1-16), bsdmainutils (= 11.1.2+b1), bsdutils (= 1:2.33.1-0.1), build-essential (= 12.6), bzip2 (= 1.0.6-9), coreutils (= 8.30-3), cpp (= 4:8.3.0-1), cpp-8 (= 8.3.0-7), d-shlibs (= 0.84), dash (= 0.5.10.2-5), debconf (= 1.5.72), debhelper (= 12.1.1), debian-archive-keyring (= 2019.1), debianutils (= 4.8.6.1), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.1.2-1), diffutils (= 1:3.7-3), dpkg (= 1.19.6), dpkg-dev (= 1.19.6), dwz (= 0.12-3), fdisk (= 2.33.1-0.1), file (= 1:5.35-4), findutils (= 4.6.0+git+20190209-2), g++ (= 4:8.3.0-1), g++-8 (= 8.3.0-7), gcc (= 4:8.3.0-1), gcc-8 (= 8.3.0-7), gcc-8-base (= 8.3.0-7), gettext (= 0.19.8.1-9), gettext-base (= 0.19.8.1-9), gpgv (= 2.2.13-2), grep (= 3.3-1), groff-base (= 1.22.4-3), gzip (= 1.9-3), hostname (= 3.21), init-system-helpers (= 1.56+nmu1), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-4), libapt-pkg5.0 (= 1.8.2), libarchive-zip-perl (= 1.64-1), libasan5 (= 8.3.0-7), libatomic1 (= 8.3.0-7), libattr1 (= 1:2.4.48-4), libaudit-common (= 1:2.8.4-3), libaudit1 (= 1:2.8.4-3), libbinutils (= 2.31.1-16), libblkid1 (= 2.33.1-0.1), libbsd0 (= 0.9.1-2), libbz2-1.0 (= 1.0.6-9), libc-bin (= 2.28-10), libc-dev-bin (= 2.28-10), libc6 (= 2.28-10), libc6-dev (= 2.28-10), libcap-ng0 (= 0.7.9-2), libcc1-0 (= 8.3.0-7), libcom-err2 (= 1.45.1-3), libcroco3 (= 0.6.12-3), libcurl3-gnutls (= 7.64.0-3), libcurl4-gnutls-dev (= 7.64.0-3), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.249), libdpkg-perl (= 1.19.6), libelf1 (= 0.176-1.1), libfdisk1 (= 2.33.1-0.1), libffi6 (= 3.2.1-9), libfile-stripnondeterminism-perl (= 1.1.2-1), libgcc-8-dev (= 8.3.0-7), libgcc1 (= 1:8.3.0-7), libgcrypt20 (= 1.8.4-5), libgdbm-compat4 (= 1.18.1-4), libgdbm6 (= 1.18.1-4), libglib2.0-0 (= 2.58.3-1), libgmp10 (= 2:6.1.2+dfsg-4), libgnutls30 (= 3.6.7-3), libgomp1 (= 8.3.0-7), libgpg-error0 (= 1.35-1), libgssapi-krb5-2 (= 1.17-2), libhogweed4 (= 3.4.1-1), libicu63 (= 63.1-6), libidn2-0 (= 2.0.5-1), libisl19 (= 0.20-2), libitm1 (= 8.3.0-7), libk5crypto3 (= 1.17-2), libkeyutils1 (= 1.6-6), libkrb5-3 (= 1.17-2), libkrb5support0 (= 1.17-2), libldap-2.4-2 (= 2.4.47+dfsg-3), libldap-common (= 2.4.47+dfsg-3), liblsan0 (= 8.3.0-7), liblz4-1 (= 1.8.3-1), liblzma5 (= 5.2.4-1), libmagic-mgc (= 1:5.35-4), libmagic1 (= 1:5.35-4), libmount1 (= 2.33.1-0.1), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libmpx2 (= 8.3.0-7), libncurses6 (= 6.1+20181013-2), libncursesw6 (= 6.1+20181013-2), libnettle6 (= 3.4.1-1), libnghttp2-14 (= 1.37.0-1), libp11-kit0 (= 0.23.15-2), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre3 (= 2:8.39-12), libperl5.28 (= 5.28.1-6), libpipeline1 (= 1.5.1-2), libpsl5 (= 0.20.2-2), libquadmath0 (= 8.3.0-7), librtmp1 (= 2.4+20151223.gitfa8646d.1-2), libsasl2-2 (= 2.1.27+dfsg-1), libsasl2-modules-db (= 2.1.27+dfsg-1), libseccomp2 (= 2.3.3-4), libselinux1 (= 2.8-1+b1), libsemanage-common (= 2.8-2), libsemanage1 (= 2.8-2), libsepol1 (= 2.8-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.33.1-0.1), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1c-1), libstdc++-8-dev (= 8.3.0-7), libstdc++6 (= 8.3.0-7), libsystemd0 (= 241-5), libtasn1-6 (= 4.13-3), libtinfo6 (= 6.1+20181013-2), libtool (= 2.4.6-10), libtsan0 (= 8.3.0-7), libubsan1 (= 8.3.0-7), libuchardet0 (= 0.0.6-3), libudev1 (= 241-5), libunistring2 (= 0.9.10-1), libuuid1 (= 2.33.1-0.1), libxml2 (= 2.9.4+dfsg1-7+b3), libzstd1 (= 1.3.8+dfsg-3), linux-libc-dev (= 4.19.37-3), login (= 1:4.5-1.1), m4 (= 1.4.18-2), make (= 4.2.1-1.2), man-db (= 2.8.5-2), mawk (= 1.3.3-17+b3), ncurses-base (= 6.1+20181013-2), ncurses-bin (= 6.1+20181013-2), passwd (= 1:4.5-1.1), patch (= 2.7.6-3), perl (= 5.28.1-6), perl-base (= 5.28.1-6), perl-modules-5.28 (= 5.28.1-6), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12), sysvinit-utils (= 2.93-8), tar (= 1.30+dfsg-6), util-linux (= 2.33.1-0.1), xz-utils (= 5.2.4-1), zlib1g (= 1:1.2.11.dfsg-1), zlib1g-dev (= 1:1.2.11.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="POSIX" SOURCE_DATE_EPOCH="1546427303" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libstaden-read-dev_1.14.11-6_mipsel.deb --------------------------------------- new Debian package, version 2.0. size 378264 bytes: control archive=2400 bytes. 779 bytes, 18 lines control 4047 bytes, 62 lines md5sums Package: libstaden-read-dev Source: staden-io-lib Version: 1.14.11-6 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 1313 Depends: libstaden-read13 (= 1.14.11-6), libcurl4-gnutls-dev, zlib1g-dev Section: libdevel Priority: optional Homepage: https://github.com/jkbonfield/io_lib Description: development files for libstaden-read This package contains the header and development files needed to build programs and packages using the Staden io_lib. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/bin/ -rwxr-xr-x root/root 898 2019-01-02 11:08 ./usr/bin/io_lib-config drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/include/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/include/io_lib/ -rw-r--r-- root/root 10263 2019-01-02 11:08 ./usr/include/io_lib/Read.h -rw-r--r-- root/root 2471 2019-01-02 11:08 ./usr/include/io_lib/abi.h -rw-r--r-- root/root 2480 2019-01-02 11:08 ./usr/include/io_lib/alf.h -rw-r--r-- root/root 3536 2019-01-02 11:08 ./usr/include/io_lib/array.h -rw-r--r-- root/root 24731 2019-01-02 11:08 ./usr/include/io_lib/bam.h -rw-r--r-- root/root 2398 2019-01-02 11:08 ./usr/include/io_lib/bgzip.h -rw-r--r-- root/root 2075 2019-01-02 11:08 ./usr/include/io_lib/binning.h -rw-r--r-- root/root 6268 2019-01-02 11:08 ./usr/include/io_lib/compress.h -rw-r--r-- root/root 15348 2019-01-02 11:08 ./usr/include/io_lib/compression.h -rw-r--r-- root/root 2405 2019-01-02 11:08 ./usr/include/io_lib/cram.h -rw-r--r-- root/root 6269 2019-01-02 11:08 ./usr/include/io_lib/cram_codecs.h -rw-r--r-- root/root 3612 2019-01-02 11:08 ./usr/include/io_lib/cram_decode.h -rw-r--r-- root/root 3769 2019-01-02 11:08 ./usr/include/io_lib/cram_encode.h -rw-r--r-- root/root 3365 2019-01-02 11:08 ./usr/include/io_lib/cram_index.h -rw-r--r-- root/root 25847 2019-01-02 11:08 ./usr/include/io_lib/cram_io.h -rw-r--r-- root/root 2481 2019-01-02 11:08 ./usr/include/io_lib/cram_stats.h -rw-r--r-- root/root 30065 2019-01-02 11:08 ./usr/include/io_lib/cram_structs.h -rw-r--r-- root/root 4951 2019-01-02 11:08 ./usr/include/io_lib/deflate_interlaced.h -rw-r--r-- root/root 9589 2019-01-02 11:08 ./usr/include/io_lib/dstring.h -rw-r--r-- root/root 2430 2019-01-02 11:08 ./usr/include/io_lib/error.h -rw-r--r-- root/root 10646 2019-01-02 11:08 ./usr/include/io_lib/expFileIO.h -rw-r--r-- root/root 2392 2019-01-02 11:08 ./usr/include/io_lib/fpoint.h -rw-r--r-- root/root 6952 2019-01-02 11:08 ./usr/include/io_lib/hash_table.h -rw-r--r-- root/root 6146 2019-01-02 11:08 ./usr/include/io_lib/io_lib_config.h -rw-r--r-- root/root 923 2019-01-02 11:08 ./usr/include/io_lib/jenkins_lookup3.h -rw-r--r-- root/root 2969 2019-01-02 11:08 ./usr/include/io_lib/mFILE.h -rw-r--r-- root/root 6459 2019-01-02 11:08 ./usr/include/io_lib/mach-io.h -rw-r--r-- root/root 1479 2019-01-02 11:08 ./usr/include/io_lib/md5.h -rw-r--r-- root/root 6841 2019-01-02 11:08 ./usr/include/io_lib/misc.h -rw-r--r-- root/root 5965 2019-01-02 11:08 ./usr/include/io_lib/open_trace_file.h -rw-r--r-- root/root 10487 2019-01-02 11:08 ./usr/include/io_lib/os.h -rw-r--r-- root/root 4216 2019-01-02 11:08 ./usr/include/io_lib/plain.h -rw-r--r-- root/root 2183 2019-01-02 11:08 ./usr/include/io_lib/pooled_alloc.h -rw-r--r-- root/root 13970 2019-01-02 11:08 ./usr/include/io_lib/sam_header.h -rw-r--r-- root/root 13901 2019-01-02 11:08 ./usr/include/io_lib/scf.h -rw-r--r-- root/root 4238 2019-01-02 11:08 ./usr/include/io_lib/scf_extras.h -rw-r--r-- root/root 8055 2019-01-02 11:08 ./usr/include/io_lib/scram.h -rw-r--r-- root/root 8453 2019-01-02 11:08 ./usr/include/io_lib/seqIOABI.h -rw-r--r-- root/root 3793 2019-01-02 11:08 ./usr/include/io_lib/sff.h -rw-r--r-- root/root 7141 2019-01-02 11:08 ./usr/include/io_lib/srf.h -rw-r--r-- root/root 3350 2019-01-02 11:08 ./usr/include/io_lib/stdio_hack.h -rw-r--r-- root/root 2423 2019-01-02 11:08 ./usr/include/io_lib/string_alloc.h -rw-r--r-- root/root 3253 2019-01-02 11:08 ./usr/include/io_lib/tar_format.h -rw-r--r-- root/root 6759 2019-01-02 11:08 ./usr/include/io_lib/thread_pool.h -rw-r--r-- root/root 5383 2019-01-02 11:08 ./usr/include/io_lib/traceType.h -rw-r--r-- root/root 7365 2019-01-02 11:08 ./usr/include/io_lib/translate.h -rw-r--r-- root/root 3578 2019-01-02 11:08 ./usr/include/io_lib/vlen.h -rw-r--r-- root/root 2562 2019-01-02 11:08 ./usr/include/io_lib/xalloc.h -rw-r--r-- root/root 2118 2019-01-02 11:08 ./usr/include/io_lib/zfio.h -rw-r--r-- root/root 8081 2019-01-02 11:08 ./usr/include/io_lib/ztr.h drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/mipsel-linux-gnu/ -rw-r--r-- root/root 901604 2019-01-02 11:08 ./usr/lib/mipsel-linux-gnu/libstaden-read.a lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/lib/mipsel-linux-gnu/libstaden-read.so -> libstaden-read.so.13.0.1 drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/libstaden-read-dev/ -rw-r--r-- root/root 3150 2019-01-02 11:08 ./usr/share/doc/libstaden-read-dev/changelog.Debian.gz -rw-r--r-- root/root 26606 2018-10-16 09:06 ./usr/share/doc/libstaden-read-dev/changelog.gz -rw-r--r-- root/root 7382 2019-01-01 09:22 ./usr/share/doc/libstaden-read-dev/copyright drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/man3/ -rw-r--r-- root/root 2119 2019-01-02 11:08 ./usr/share/man/man3/ExperimentFile.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/exp2read.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fread_reading.3.gz -> read_reading.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fread_scf.3.gz -> read_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fwrite_reading.3.gz -> write_reading.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/fwrite_scf.3.gz -> write_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read2exp.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read2scf.3.gz -> scf2read.3.gz -rw-r--r-- root/root 591 2019-01-02 11:08 ./usr/share/man/man3/read_allocate.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read_deallocate.3.gz -> read_allocate.3.gz -rw-r--r-- root/root 1550 2019-01-02 11:08 ./usr/share/man/man3/read_reading.3.gz -rw-r--r-- root/root 610 2019-01-02 11:08 ./usr/share/man/man3/read_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/read_scf_header.3.gz -> read_scf.3.gz -rw-r--r-- root/root 783 2019-01-02 11:08 ./usr/share/man/man3/scf2read.3.gz -rw-r--r-- root/root 804 2019-01-02 11:08 ./usr/share/man/man3/write_reading.3.gz -rw-r--r-- root/root 608 2019-01-02 11:08 ./usr/share/man/man3/write_scf.3.gz lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man3/write_scf_header.3.gz -> write_scf.3.gz drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/man4/ lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/man/man4/Read.4.gz -> ../man3/read_reading.3.gz libstaden-read13-dbgsym_1.14.11-6_mipsel.deb -------------------------------------------- new Debian package, version 2.0. size 702672 bytes: control archive=564 bytes. 425 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libstaden-read13-dbgsym Source: staden-io-lib Version: 1.14.11-6 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 748 Depends: libstaden-read13 (= 1.14.11-6) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libstaden-read13 Build-Ids: 2dba4c4239482d25f29992d75582089885f7f7d5 drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/debug/.build-id/2d/ -rw-r--r-- root/root 754864 2019-01-02 11:08 ./usr/lib/debug/.build-id/2d/ba4c4239482d25f29992d75582089885f7f7d5.debug drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/share/doc/libstaden-read13-dbgsym -> libstaden-read13 libstaden-read13_1.14.11-6_mipsel.deb ------------------------------------- new Debian package, version 2.0. size 270260 bytes: control archive=1092 bytes. 929 bytes, 20 lines control 322 bytes, 4 lines md5sums 35 bytes, 1 lines shlibs 67 bytes, 2 lines triggers Package: libstaden-read13 Source: staden-io-lib Version: 1.14.11-6 Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 667 Depends: libc6 (>= 2.28), libcurl3-gnutls (>= 7.16.2), zlib1g (>= 1:1.2.3.3) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/jkbonfield/io_lib Description: Staden library for reading and writing DNA sequencing results This package contains the Staden io_lib, that is renamed in Debian and Fedora ‘staden-read’ instead of ‘read’. This library supports various DNA sequence read formats, in particular SCF, ABI, ALF, CTF, ZTR, SFF and SRF. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/lib/mipsel-linux-gnu/ lrwxrwxrwx root/root 0 2019-01-02 11:08 ./usr/lib/mipsel-linux-gnu/libstaden-read.so.13 -> libstaden-read.so.13.0.1 -rw-r--r-- root/root 632232 2019-01-02 11:08 ./usr/lib/mipsel-linux-gnu/libstaden-read.so.13.0.1 drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/libstaden-read13/ -rw-r--r-- root/root 3150 2019-01-02 11:08 ./usr/share/doc/libstaden-read13/changelog.Debian.gz -rw-r--r-- root/root 26606 2018-10-16 09:06 ./usr/share/doc/libstaden-read13/changelog.gz -rw-r--r-- root/root 7382 2019-01-01 09:22 ./usr/share/doc/libstaden-read13/copyright staden-io-lib-utils-dbgsym_1.14.11-6_mipsel.deb ----------------------------------------------- new Debian package, version 2.0. size 400296 bytes: control archive=2176 bytes. 1852 bytes, 12 lines control 3816 bytes, 36 lines md5sums Package: staden-io-lib-utils-dbgsym Source: staden-io-lib Version: 1.14.11-6 Auto-Built-Package: debug-symbols Architecture: mipsel Maintainer: Debian Med Packaging Team Installed-Size: 633 Depends: staden-io-lib-utils (= 1.14.11-6) Section: debug Priority: optional Description: debug symbols for staden-io-lib-utils Build-Ids: 12bcb96139fb8633150f91c7e775271ad7503b18 1af771d5794864af11506c5927bc3d640fdc07f2 2b7f68f291ec708fde88b47c5cdac64bda8823be 42a0ab1ad0d320432f6676308c38e419c6741e7c 46a02b58e3fd9c69f7bdf13bcec3453b187804d4 51949228bd4c5a374f6b0c67dc926fc840fe714f 5e3db96b0e014bd852606307f43f602968ffc1df 700d28fc26840b24cacbffb00e1d7a9d396e1fa9 79d97560cdea26bcb496754669591e6286749e9c 8acae1592d1e6185c3560ef7c6b80b26c05ab7cb 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file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. . This package contains the programs that are distributed with the Staden io_lib for manipulating and converting sequencing data files, and in particular files to maniuplate short reads generated by second and third generation sequencers and stored in SRF format. drwxr-xr-x root/root 0 2019-01-02 11:08 ./ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/bin/ -rwxr-xr-x root/root 10072 2019-01-02 11:08 ./usr/bin/append_sff -rwxr-xr-x root/root 19036 2019-01-02 11:08 ./usr/bin/convert_trace -rwxr-xr-x root/root 26792 2019-01-02 11:08 ./usr/bin/cram_dump -rwxr-xr-x root/root 22792 2019-01-02 11:08 ./usr/bin/cram_filter -rwxr-xr-x root/root 5936 2019-01-02 11:08 ./usr/bin/cram_index -rwxr-xr-x root/root 14320 2019-01-02 11:08 ./usr/bin/cram_size -rwxr-xr-x root/root 10136 2019-01-02 11:08 ./usr/bin/extract_fastq -rwxr-xr-x root/root 14256 2019-01-02 11:08 ./usr/bin/extract_qual -rwxr-xr-x root/root 10152 2019-01-02 11:08 ./usr/bin/extract_seq 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2019-01-02 11:08 ./usr/bin/scramble -rwxr-xr-x root/root 10140 2019-01-02 11:08 ./usr/bin/srf2fasta -rwxr-xr-x root/root 18524 2019-01-02 11:08 ./usr/bin/srf2fastq -rwxr-xr-x root/root 31424 2019-01-02 11:08 ./usr/bin/srf_dump_all -rwxr-xr-x root/root 10204 2019-01-02 11:08 ./usr/bin/srf_extract_hash -rwxr-xr-x root/root 10160 2019-01-02 11:08 ./usr/bin/srf_extract_linear -rwxr-xr-x root/root 27068 2019-01-02 11:08 ./usr/bin/srf_filter -rwxr-xr-x root/root 10140 2019-01-02 11:08 ./usr/bin/srf_index_hash -rwxr-xr-x root/root 18656 2019-01-02 11:08 ./usr/bin/srf_info -rwxr-xr-x root/root 10252 2019-01-02 11:08 ./usr/bin/srf_list -rwxr-xr-x root/root 10032 2019-01-02 11:08 ./usr/bin/trace_dump -rwxr-xr-x root/root 10188 2019-01-02 11:08 ./usr/bin/ztr_dump drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc-base/ -rw-r--r-- root/root 304 2019-01-01 09:22 ./usr/share/doc-base/staden-io-lib-hash-file-format -rw-r--r-- root/root 349 2019-01-01 09:22 ./usr/share/doc-base/staden-io-lib-ztr-format drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/doc/staden-io-lib-utils/ -rw-r--r-- root/root 3266 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/Hash_File_Format -rw-r--r-- root/root 4890 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/README.md.gz -rw-r--r-- root/root 20980 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/ZTR_format.gz -rw-r--r-- root/root 3150 2019-01-02 11:08 ./usr/share/doc/staden-io-lib-utils/changelog.Debian.gz -rw-r--r-- root/root 26606 2018-10-16 09:06 ./usr/share/doc/staden-io-lib-utils/changelog.gz -rw-r--r-- root/root 7382 2019-01-01 09:22 ./usr/share/doc/staden-io-lib-utils/copyright drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/ drwxr-xr-x root/root 0 2019-01-02 11:08 ./usr/share/man/man1/ -rw-r--r-- root/root 380 2019-01-02 11:08 ./usr/share/man/man1/append_sff.1.gz -rw-r--r-- root/root 2043 2019-01-02 11:08 ./usr/share/man/man1/scramble.1.gz -rw-r--r-- root/root 358 2019-01-02 11:08 ./usr/share/man/man1/srf2fasta.1.gz -rw-r--r-- root/root 1321 2019-01-02 11:08 ./usr/share/man/man1/srf2fastq.1.gz -rw-r--r-- root/root 836 2019-01-02 11:08 ./usr/share/man/man1/srf_dump_all.1.gz -rw-r--r-- root/root 859 2019-01-02 11:08 ./usr/share/man/man1/srf_filter.1.gz -rw-r--r-- root/root 572 2019-01-02 11:08 ./usr/share/man/man1/srf_index_hash.1.gz -rw-r--r-- root/root 748 2019-01-02 11:08 ./usr/share/man/man1/srf_info.1.gz -rw-r--r-- root/root 804 2019-01-02 11:08 ./usr/share/man/man1/srf_list.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 41080 Build-Time: 120 Distribution: unstable Foreign Architectures: mipsel Host Architecture: mipsel Install-Time: 26 Job: staden-io-lib_1.14.11-6 Lintian: pass Machine Architecture: amd64 Package: staden-io-lib Package-Time: 156 Source-Version: 1.14.11-6 Space: 41080 Status: successful Version: 1.14.11-6 -------------------------------------------------------------------------------- Finished at 2019-06-03T11:43:50Z Build needed 00:02:36, 41080k disk space