sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +==============================================================================+ | staden-io-lib 1.14.12-2 (mips64el) Sat, 04 Jul 2020 22:01:26 +0000 | +==============================================================================+ Package: staden-io-lib Version: 1.14.12-2 Source Version: 1.14.12-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-162eb9c6-9495-4540-8a5e-fa5bd455c4f6' with '<>' I: NOTICE: Log filtering will replace 'build/staden-io-lib-eeKlfO/resolver-Xv0nzA' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [146 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [27.9 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [27.9 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-04-0803.37.pdiff [3374 B] Get:5 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-04-1402.04.pdiff [17.6 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-04-2007.02.pdiff [20.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main Sources 2020-07-04-2007.02.pdiff [20.9 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-04-0803.37.pdiff [3658 B] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-04-1402.04.pdiff [10.3 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-04-2007.02.pdiff [13.7 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 Packages 2020-07-04-2007.02.pdiff [13.7 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main mips64el Packages [7949 kB] Fetched 8221 kB in 2s (5286 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'staden-io-lib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/staden-io-lib.git Please use: git clone https://salsa.debian.org/med-team/staden-io-lib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 3385 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.12-2 (dsc) [2476 B] Get:2 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.12-2 (tar) [3367 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main staden-io-lib 1.14.12-2 (diff) [16.0 kB] Fetched 3385 kB in 0s (31.3 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/staden-io-lib-eeKlfO/staden-io-lib-1.14.12' with '<>' I: NOTICE: Log filtering will replace 'build/staden-io-lib-eeKlfO' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), zlib1g-dev, libcurl4-gnutls-dev | libcurl4-nss-dev, libhtscodecs-dev, d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 12), zlib1g-dev, libcurl4-gnutls-dev, libhtscodecs-dev, d-shlibs, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [442 B] Get:5 copy:/<>/apt_archive ./ Packages [525 B] Fetched 1924 B in 0s (77.3 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libbrotli1:mips64el libbz2-1.0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl3-gnutls:mips64el libcurl4-gnutls-dev:mips64el libdb5.3:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libffi7:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgcrypt20:mips64el libglib2.0-0 libgmp10:mips64el libgnutls30:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgpg-error0:mips64el libgssapi-krb5-2:mips64el libhogweed5:mips64el libhtscodecs-dev:mips64el libhtscodecs2:mips64el libicu67 libidn2-0:mips64el libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el libldap-2.4-2:mips64el libldap-common liblocale-gettext-perl libmagic-mgc libmagic1 libnettle7:mips64el libnghttp2-14:mips64el libp11-kit0:mips64el libperl5.30 libpipeline1 libpsl5:mips64el librtmp1:mips64el libsasl2-2:mips64el libsasl2-modules-db:mips64el libsigsegv2 libssh2-1:mips64el libssl1.1:mips64el libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtasn1-6:mips64el libtool libuchardet0 libunistring2:mips64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.30 po-debconf sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-9-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-9-multilib gcc-9-doc g++-9-multilib-mips64el-linux-gnuabi64 gcc-9-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips64el libc-l10n:mips64el locales:mips64el glibc-doc manpages-dev:mips64el libcurl4-doc:mips64el libgnutls28-dev:mips64el libidn11-dev:mips64el libkrb5-dev:mips64el libldap2-dev:mips64el librtmp-dev:mips64el libssh2-1-dev:mips64el pkg-config:mips64el gnupg git bzr rng-tools:mips64el gnutls-bin:mips64el krb5-doc:mips64el krb5-user:mips64el libstdc++-9-doc libstdc++-9-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates:mips64el libfile-fcntllock-perl libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpg-error-l10n:mips64el krb5-locales:mips64el publicsuffix:mips64el libsasl2-modules:mips64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils build-essential cpp-9-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dpkg-dev dwz file g++ g++-9 g++-9-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-10-base:mips64el gcc-10-cross-base-mipsen gcc-9-base:mips64el gcc-9-cross-base-mipsen gcc-9-mips64el-linux-gnuabi64 gcc-9-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libbrotli1:mips64el libbz2-1.0:mips64el libc6:mips64el libc6-dev libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcroco3 libcrypt-dev libcrypt-dev:mips64el libcrypt1:mips64el libcurl3-gnutls:mips64el libcurl4-gnutls-dev:mips64el libdb5.3:mips64el libdebhelper-perl libdebian-dpkgcross-perl libdpkg-perl libelf1 libffi7:mips64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-9-dev:mips64el libgcc-9-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgcrypt20:mips64el libglib2.0-0 libgmp10:mips64el libgnutls30:mips64el libgomp1:mips64el libgomp1-mips64el-cross libgpg-error0:mips64el libgssapi-krb5-2:mips64el libhogweed5:mips64el libhtscodecs-dev:mips64el libhtscodecs2:mips64el libicu67 libidn2-0:mips64el libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el libldap-2.4-2:mips64el libldap-common liblocale-gettext-perl libmagic-mgc libmagic1 libnettle7:mips64el libnghttp2-14:mips64el libp11-kit0:mips64el libperl5.30 libpipeline1 libpsl5:mips64el librtmp1:mips64el libsasl2-2:mips64el libsasl2-modules-db:mips64el libsigsegv2 libssh2-1:mips64el libssl1.1:mips64el libstdc++-9-dev libstdc++-9-dev:mips64el libstdc++-9-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtasn1-6:mips64el libtool libuchardet0 libunistring2:mips64el libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db perl perl-modules-5.30 po-debconf sbuild-build-depends-main-dummy:mips64el sensible-utils ucf zlib1g:mips64el zlib1g-dev:mips64el 0 upgraded, 130 newly installed, 0 to remove and 0 not upgraded. Need to get 96.4 MB of archives. After this operation, 395 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [952 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.35.2-6 [129 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-5 [920 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.2-2 [33.9 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.3-1 [1315 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.30 all 5.30.3-4 [2806 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.30 amd64 5.30.3-4 [4019 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.30.3-4 [290 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4 [18.8 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-10-base mips64el 10.1.0-4 [198 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main mips64el gcc-9-base mips64el 9.3.0-14 [197 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.12+nmu1 [16.0 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.38-5 [262 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.38-5 [120 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.38-5 [67.9 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.19.8.1-10 [123 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-4 [203 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.69-11.1 [341 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.2-1 [775 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.19.8.1-10 [435 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-mips64el-linux-gnuabi64 amd64 2.34-5cross6 [2310 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.16-1 [104 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.30-8 [2631 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev amd64 9.3.0-14 [1701 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9 amd64 9.3.0-14 [10.7 MB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:9.2.1-3.1 [1644 B] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.3 [1468 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.3 [1905 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.8 [7640 B] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64-base amd64 9.3.0-8cross1 [196 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-9-mips64el-linux-gnuabi64 amd64 9.3.0-8cross1 [6468 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [16.7 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.15-3.1 [39.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-cross-base-mipsen all 9.3.0-8cross1 [192 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-10-cross-base-mipsen all 10-20200324-1cross1 [192 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-mips64el-cross all 2.30-2cross1 [1327 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-mips64el-cross all 10-20200324-1cross1 [69.8 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-mips64el-cross all 10-20200324-1cross1 [87.5 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-mips64el-cross all 10-20200324-1cross1 [7388 B] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-9-dev-mips64el-cross all 9.3.0-8cross1 [248 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-9-mips64el-linux-gnuabi64 amd64 9.3.0-8cross1 [6825 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1484 B] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-mips64el-cross all 10-20200324-1cross1 [393 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-mips64el-cross all 5.4.19-1cross1 [1166 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-mips64el-cross all 2.30-2cross1 [2476 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-9-dev-mips64el-cross all 9.3.0-8cross1 [1726 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 g++-9-mips64el-linux-gnuabi64 amd64 9.3.0-8cross1 [7050 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:9.2.1-4.1 [1192 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-2 [8610 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.10+dfsg-5+b1 [710 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1 [14.8 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1 [20.4 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2 [343 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1 [19.5 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.004-1 [42.7 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.15-3.1 [38.9 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.15-3.1 [49.9 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-mips64el all 12.8 [6704 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 d-shlibs all 0.93 [17.7 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-14 [513 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 19 [16.9 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.1 [187 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.8.1-1 [14.9 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.13-5 [151 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libglib2.0-0 amd64 2.64.3-2 [1343 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libcroco3 amd64 0.6.13-1 [146 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.19.8.1-10 [1303 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21 [248 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.1 [1012 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-s1 mips64el 10.1.0-4 [69.4 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt1 mips64el 1:4.4.16-1 [95.5 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main mips64el libc6 mips64el 2.30-8 [2554 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main mips64el libatomic1 mips64el 10.1.0-4 [7480 B] Get:89 http://debian.oregonstate.edu/debian unstable/main mips64el libbrotli1 mips64el 1.0.7-6.1 [271 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main mips64el libbz2-1.0 mips64el 1.0.8-3 [47.4 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main mips64el linux-libc-dev mips64el 5.7.6-1 [1120 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main mips64el libcrypt-dev mips64el 1:4.4.16-1 [118 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main mips64el libc6-dev mips64el 2.30-8 [2476 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main mips64el libcom-err2 mips64el 1.45.6-1 [71.5 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main mips64el libgmp10 mips64el 2:6.2.0+dfsg-6 [241 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main mips64el libnettle7 mips64el 3.5.1+really3.5.1-2 [236 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main mips64el libhogweed5 mips64el 3.5.1+really3.5.1-2 [132 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main mips64el libunistring2 mips64el 0.9.10-4 [371 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main mips64el libidn2-0 mips64el 2.3.0-1 [84.5 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main mips64el libffi7 mips64el 3.3-4 [22.6 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main mips64el libp11-kit0 mips64el 0.23.20-1 [269 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main mips64el libtasn1-6 mips64el 4.16.0-2 [52.6 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main mips64el libgnutls30 mips64el 3.6.14-2 [1089 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5support0 mips64el 1.17-10 [62.7 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main mips64el libk5crypto3 mips64el 1.17-10 [121 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main mips64el libkeyutils1 mips64el 1.6.1-2 [15.0 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main mips64el libssl1.1 mips64el 1.1.1g-1 [1143 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main mips64el libkrb5-3 mips64el 1.17-10 [333 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main mips64el libgssapi-krb5-2 mips64el 1.17-10 [142 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main mips64el libdb5.3 mips64el 5.3.28+dfsg1-0.6 [597 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main mips64el libsasl2-modules-db mips64el 2.1.27+dfsg-2 [68.3 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main mips64el libsasl2-2 mips64el 2.1.27+dfsg-2 [102 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-common all 2.4.50+dfsg-1 [92.9 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main mips64el libldap-2.4-2 mips64el 2.4.50+dfsg-1 [207 kB] Get:115 http://debian.oregonstate.edu/debian unstable/main mips64el libnghttp2-14 mips64el 1.41.0-2 [68.2 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main mips64el libpsl5 mips64el 0.21.0-1.1 [55.0 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g mips64el 1:1.2.11.dfsg-2 [88.2 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main mips64el librtmp1 mips64el 2.4+20151223.gitfa8646d.1-2+b1 [56.0 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main mips64el libgpg-error0 mips64el 1.38-2 [74.2 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main mips64el libgcrypt20 mips64el 1.8.5-5 [497 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main mips64el libssh2-1 mips64el 1.8.0-2.1 [134 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main mips64el libcurl3-gnutls mips64el 7.68.0-1 [296 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main mips64el libcurl4-gnutls-dev mips64el 7.68.0-1 [420 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main mips64el libgomp1 mips64el 10.1.0-4 [89.6 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main mips64el libgcc-9-dev mips64el 9.3.0-14 [248 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main mips64el libhtscodecs2 mips64el 0.5-3 [54.4 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main mips64el libhtscodecs-dev mips64el 0.5-3 [2518 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++6 mips64el 10.1.0-4 [432 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main mips64el libstdc++-9-dev mips64el 9.3.0-14 [1736 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main mips64el zlib1g-dev mips64el 1:1.2.11.dfsg-2 [191 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 96.4 MB in 1s (114 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10480 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.35.2-6_amd64.deb ... Unpacking bsdextrautils (2.35.2-6) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-5_amd64.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.2-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.2-2) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.3-1_amd64.deb ... Unpacking man-db (2.9.3-1) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../005-perl-modules-5.30_5.30.3-4_all.deb ... Unpacking perl-modules-5.30 (5.30.3-4) ... Selecting previously unselected package libperl5.30:amd64. Preparing to unpack .../006-libperl5.30_5.30.3-4_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.3-4) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.30.3-4_amd64.deb ... Unpacking perl (5.30.3-4) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4) ... Selecting previously unselected package gcc-10-base:mips64el. Preparing to unpack .../009-gcc-10-base_10.1.0-4_mips64el.deb ... Unpacking gcc-10-base:mips64el (10.1.0-4) ... Selecting previously unselected package gcc-9-base:mips64el. Preparing to unpack .../010-gcc-9-base_9.3.0-14_mips64el.deb ... Unpacking gcc-9-base:mips64el (9.3.0-14) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../011-sensible-utils_0.0.12+nmu1_all.deb ... Unpacking sensible-utils (0.0.12+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../012-libmagic-mgc_1%3a5.38-5_amd64.deb ... Unpacking libmagic-mgc (1:5.38-5) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../013-libmagic1_1%3a5.38-5_amd64.deb ... Unpacking libmagic1:amd64 (1:5.38-5) ... Selecting previously unselected package file. Preparing to unpack .../014-file_1%3a5.38-5_amd64.deb ... Unpacking file (1:5.38-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../015-gettext-base_0.19.8.1-10_amd64.deb ... Unpacking gettext-base (0.19.8.1-10) ... Selecting previously unselected package ucf. Preparing to unpack .../016-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../017-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. 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Preparing to unpack .../024-libcrypt-dev_1%3a4.4.16-1_amd64.deb ... Unpacking libcrypt-dev:amd64 (1:4.4.16-1) ... Selecting previously unselected package libc6-dev:amd64. Preparing to unpack .../025-libc6-dev_2.30-8_amd64.deb ... Unpacking libc6-dev:amd64 (2.30-8) ... Selecting previously unselected package libstdc++-9-dev:amd64. Preparing to unpack .../026-libstdc++-9-dev_9.3.0-14_amd64.deb ... Unpacking libstdc++-9-dev:amd64 (9.3.0-14) ... Selecting previously unselected package g++-9. Preparing to unpack .../027-g++-9_9.3.0-14_amd64.deb ... Unpacking g++-9 (9.3.0-14) ... Selecting previously unselected package g++. Preparing to unpack .../028-g++_4%3a9.2.1-3.1_amd64.deb ... Unpacking g++ (4:9.2.1-3.1) ... Selecting previously unselected package libdpkg-perl. Preparing to unpack .../029-libdpkg-perl_1.20.3_all.deb ... Unpacking libdpkg-perl (1.20.3) ... Selecting previously unselected package dpkg-dev. Preparing to unpack .../030-dpkg-dev_1.20.3_all.deb ... Unpacking dpkg-dev (1.20.3) ... Selecting previously unselected package build-essential. Preparing to unpack .../031-build-essential_12.8_amd64.deb ... Unpacking build-essential (12.8) ... Selecting previously unselected package gcc-9-mips64el-linux-gnuabi64-base:amd64. Preparing to unpack .../032-gcc-9-mips64el-linux-gnuabi64-base_9.3.0-8cross1_amd64.deb ... Unpacking gcc-9-mips64el-linux-gnuabi64-base:amd64 (9.3.0-8cross1) ... Selecting previously unselected package cpp-9-mips64el-linux-gnuabi64. Preparing to unpack .../033-cpp-9-mips64el-linux-gnuabi64_9.3.0-8cross1_amd64.deb ... Unpacking cpp-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Selecting previously unselected package cpp-mips64el-linux-gnuabi64. Preparing to unpack .../034-cpp-mips64el-linux-gnuabi64_4%3a9.2.1-4.1_amd64.deb ... Unpacking cpp-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Selecting previously unselected package cross-config. Preparing to unpack .../035-cross-config_2.6.15-3.1_all.deb ... Unpacking cross-config (2.6.15-3.1) ... Selecting previously unselected package gcc-9-cross-base-mipsen. Preparing to unpack .../036-gcc-9-cross-base-mipsen_9.3.0-8cross1_all.deb ... Unpacking gcc-9-cross-base-mipsen (9.3.0-8cross1) ... Selecting previously unselected package gcc-10-cross-base-mipsen. Preparing to unpack .../037-gcc-10-cross-base-mipsen_10-20200324-1cross1_all.deb ... Unpacking gcc-10-cross-base-mipsen (10-20200324-1cross1) ... Selecting previously unselected package libc6-mips64el-cross. Preparing to unpack .../038-libc6-mips64el-cross_2.30-2cross1_all.deb ... Unpacking libc6-mips64el-cross (2.30-2cross1) ... Selecting previously unselected package libgcc-s1-mips64el-cross. Preparing to unpack .../039-libgcc-s1-mips64el-cross_10-20200324-1cross1_all.deb ... Unpacking libgcc-s1-mips64el-cross (10-20200324-1cross1) ... Selecting previously unselected package libgomp1-mips64el-cross. Preparing to unpack .../040-libgomp1-mips64el-cross_10-20200324-1cross1_all.deb ... Unpacking libgomp1-mips64el-cross (10-20200324-1cross1) ... Selecting previously unselected package libatomic1-mips64el-cross. Preparing to unpack .../041-libatomic1-mips64el-cross_10-20200324-1cross1_all.deb ... Unpacking libatomic1-mips64el-cross (10-20200324-1cross1) ... Selecting previously unselected package libgcc-9-dev-mips64el-cross. Preparing to unpack .../042-libgcc-9-dev-mips64el-cross_9.3.0-8cross1_all.deb ... Unpacking libgcc-9-dev-mips64el-cross (9.3.0-8cross1) ... Selecting previously unselected package gcc-9-mips64el-linux-gnuabi64. Preparing to unpack .../043-gcc-9-mips64el-linux-gnuabi64_9.3.0-8cross1_amd64.deb ... Unpacking gcc-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Selecting previously unselected package gcc-mips64el-linux-gnuabi64. Preparing to unpack .../044-gcc-mips64el-linux-gnuabi64_4%3a9.2.1-4.1_amd64.deb ... Unpacking gcc-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Selecting previously unselected package libstdc++6-mips64el-cross. 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Selecting previously unselected package g++-mips64el-linux-gnuabi64. Preparing to unpack .../050-g++-mips64el-linux-gnuabi64_4%3a9.2.1-4.1_amd64.deb ... Unpacking g++-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../051-libconfig-inifiles-perl_3.000003-1_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-1) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../052-libio-string-perl_1.08-3_all.deb ... Unpacking libio-string-perl (1.08-3) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../053-libicu67_67.1-2_amd64.deb ... Unpacking libicu67:amd64 (67.1-2) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../054-libxml2_2.9.10+dfsg-5+b1_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-5+b1) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../055-libxml-namespacesupport-perl_1.12-1_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-1) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../056-libxml-sax-base-perl_1.09-1_all.deb ... Unpacking libxml-sax-base-perl (1.09-1) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../057-libxml-sax-perl_1.02+dfsg-1_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-1) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../058-libxml-libxml-perl_2.0134+dfsg-2_amd64.deb ... Unpacking libxml-libxml-perl (2.0134+dfsg-2) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../059-libxml-simple-perl_2.25-1_all.deb ... Unpacking libxml-simple-perl (2.25-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../060-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../061-libconfig-auto-perl_0.44-1_all.deb ... Unpacking libconfig-auto-perl (0.44-1) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../062-libfile-which-perl_1.23-1_all.deb ... Unpacking libfile-which-perl (1.23-1) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../063-libfile-homedir-perl_1.004-1_all.deb ... Unpacking libfile-homedir-perl (1.004-1) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../064-libdebian-dpkgcross-perl_2.6.15-3.1_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.15-3.1) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../065-dpkg-cross_2.6.15-3.1_all.deb ... Unpacking dpkg-cross (2.6.15-3.1) ... Selecting previously unselected package crossbuild-essential-mips64el. Preparing to unpack .../066-crossbuild-essential-mips64el_12.8_all.deb ... Unpacking crossbuild-essential-mips64el (12.8) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../067-d-shlibs_0.93_all.deb ... Unpacking d-shlibs (0.93) ... Selecting previously unselected package libtool. Preparing to unpack .../068-libtool_2.4.6-14_all.deb ... Unpacking libtool (2.4.6-14) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../069-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../070-libdebhelper-perl_13.1_all.deb ... Unpacking libdebhelper-perl (13.1) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../071-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. 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Setting up gcc-9-cross-base-mipsen (9.3.0-8cross1) ... Setting up libldap-common (2.4.50+dfsg-1) ... Setting up binutils-mips64el-linux-gnuabi64 (2.34-5cross6) ... Setting up gcc-10-base:mips64el (10.1.0-4) ... Setting up autotools-dev (20180224.1) ... Setting up cross-config (2.6.15-3.1) ... Setting up gcc-10-cross-base-mipsen (10-20200324-1cross1) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up autopoint (0.19.8.1-10) ... Setting up d-shlibs (0.93) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.16-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libperl5.30:amd64 (5.30.3-4) ... Setting up libc6-dev:amd64 (2.30-8) ... Setting up linux-libc-dev-mips64el-cross (5.4.19-1cross1) ... Setting up cpp-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Setting up cpp-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libgomp1-mips64el-cross (10-20200324-1cross1) ... Setting up libgcc-s1-mips64el-cross (10-20200324-1cross1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.10+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4) ... Setting up gcc-9-base:mips64el (9.3.0-14) ... Setting up libatomic1-mips64el-cross (10-20200324-1cross1) ... Setting up libstdc++-9-dev:amd64 (9.3.0-14) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up perl (5.30.3-4) ... Setting up libc6-dev-mips64el-cross (2.30-2cross1) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up ucf (3.0043) ... Setting up g++-9 (9.3.0-14) ... Setting up libdpkg-perl (1.20.3) ... Setting up autoconf (2.69-11.1) ... Setting up libstdc++6-mips64el-cross (10-20200324-1cross1) ... Setting up g++ (4:9.2.1-3.1) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up libgcc-9-dev-mips64el-cross (9.3.0-8cross1) ... Setting up libsub-override-perl (0.09-2) ... Setting up automake (1:1.16.2-1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up gettext (0.19.8.1-10) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libstdc++-9-dev-mips64el-cross (9.3.0-8cross1) ... Setting up libdebhelper-perl (13.1) ... Setting up libxml-namespacesupport-perl (1.12-1) ... Setting up man-db (2.9.3-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up gcc-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Setting up dpkg-dev (1.20.3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxml-sax-base-perl (1.09-1) ... Setting up libio-string-perl (1.08-3) ... Setting up gcc-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up build-essential (12.8) ... Setting up libfile-homedir-perl (1.004-1) ... Setting up libfile-stripnondeterminism-perl (1.8.1-1) ... Setting up g++-9-mips64el-linux-gnuabi64 (9.3.0-8cross1) ... Setting up po-debconf (1.0.21) ... Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libxml-libxml-perl (2.0134+dfsg-2) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.8.1-1) ... Setting up g++-mips64el-linux-gnuabi64 (4:9.2.1-4.1) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1) ... Setting up libdebian-dpkgcross-perl (2.6.15-3.1) ... Setting up dpkg-cross (2.6.15-3.1) ... Setting up crossbuild-essential-mips64el (12.8) ... Setting up libcrypt1:mips64el (1:4.4.16-1) ... Setting up libgcc-s1:mips64el (10.1.0-4) ... Setting up dh-autoreconf (19) ... Setting up libc6:mips64el (2.30-8) ... Setting up libnettle7:mips64el (3.5.1+really3.5.1-2) ... Setting up libcrypt-dev:mips64el (1:4.4.16-1) ... Setting up libtasn1-6:mips64el (4.16.0-2) ... Setting up libc6-dev:mips64el (2.30-8) ... Setting up libbz2-1.0:mips64el (1.0.8-3) ... Setting up libdb5.3:mips64el (5.3.28+dfsg1-0.6) ... Setting up libstdc++6:mips64el (10.1.0-4) ... Setting up libhtscodecs2:mips64el (0.5-3) ... Setting up libkeyutils1:mips64el (1.6.1-2) ... Setting up libgpg-error0:mips64el (1.38-2) ... Setting up libssl1.1:mips64el (1.1.1g-1) ... Setting up libbrotli1:mips64el (1.0.7-6.1) ... Setting up libffi7:mips64el (3.3-4) ... Setting up libnghttp2-14:mips64el (1.41.0-2) ... Setting up libunistring2:mips64el (0.9.10-4) ... Setting up libgcrypt20:mips64el (1.8.5-5) ... Setting up debhelper (13.1) ... Setting up zlib1g:mips64el (1:1.2.11.dfsg-2) ... Setting up libidn2-0:mips64el (2.3.0-1) ... Setting up libcom-err2:mips64el (1.45.6-1) ... Setting up libgomp1:mips64el (10.1.0-4) ... Setting up libkrb5support0:mips64el (1.17-10) ... Setting up libsasl2-modules-db:mips64el (2.1.27+dfsg-2) ... Setting up libhtscodecs-dev:mips64el (0.5-3) ... Setting up libgmp10:mips64el (2:6.2.0+dfsg-6) ... Setting up libp11-kit0:mips64el (0.23.20-1) ... Setting up libatomic1:mips64el (10.1.0-4) ... Setting up libk5crypto3:mips64el (1.17-10) ... Setting up libsasl2-2:mips64el (2.1.27+dfsg-2) ... Setting up zlib1g-dev:mips64el (1:1.2.11.dfsg-2) ... Setting up libssh2-1:mips64el (1.8.0-2.1) ... Setting up libkrb5-3:mips64el (1.17-10) ... Setting up libpsl5:mips64el (0.21.0-1.1) ... Setting up libhogweed5:mips64el (3.5.1+really3.5.1-2) ... Setting up libgcc-9-dev:mips64el (9.3.0-14) ... Setting up libgnutls30:mips64el (3.6.14-2) ... Setting up librtmp1:mips64el (2.4+20151223.gitfa8646d.1-2+b1) ... Setting up libgssapi-krb5-2:mips64el (1.17-10) ... Setting up libstdc++-9-dev:mips64el (9.3.0-14) ... Setting up libldap-2.4-2:mips64el (2.4.50+dfsg-1) ... Setting up libcurl3-gnutls:mips64el (7.68.0-1) ... Setting up libcurl4-gnutls-dev:mips64el (7.68.0-1) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.30-8) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-9-amd64 #1 SMP Debian 4.19.118-2 (2020-04-29) amd64 (x86_64) Toolchain package versions: binutils_2.34-8 dpkg-dev_1.20.3 g++-9_9.3.0-14 gcc-9_9.3.0-14 libc6-dev_2.30-8 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-mips64el-cross_9.3.0-8cross1 libstdc++6_10.1.0-4 libstdc++6-mips64el-cross_10-20200324-1cross1 linux-libc-dev_5.7.6-1 Package versions: adduser_3.118 apt_2.1.6 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8 binutils-common_2.34-8 binutils-mips64el-linux-gnuabi64_2.34-5cross6 binutils-x86-64-linux-gnu_2.34-8 bsdextrautils_2.35.2-6 bsdutils_1:2.35.2-6 build-essential_12.8 bzip2_1.0.8-3 coreutils_8.32-2 cpp_4:9.2.1-3.1 cpp-8_8.4.0-4 cpp-9_9.3.0-14 cpp-9-mips64el-linux-gnuabi64_9.3.0-8cross1 cpp-mips64el-linux-gnuabi64_4:9.2.1-4.1 cross-config_2.6.15-3.1 crossbuild-essential-mips64el_12.8 d-shlibs_0.93 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.1 debian-archive-keyring_2019.1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dmsetup_2:1.02.167-1+b1 dpkg_1.20.3 dpkg-cross_2.6.15-3.1 dpkg-dev_1.20.3 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.2-6 file_1:5.38-5 findutils_4.7.0-1 g++_4:9.2.1-3.1 g++-9_9.3.0-14 g++-9-mips64el-linux-gnuabi64_9.3.0-8cross1 g++-mips64el-linux-gnuabi64_4:9.2.1-4.1 gcc_4:9.2.1-3.1 gcc-10-base_10.1.0-4 gcc-10-cross-base-mipsen_10-20200324-1cross1 gcc-8-base_8.4.0-4 gcc-9_9.3.0-14 gcc-9-base_9.3.0-14 gcc-9-cross-base-mipsen_9.3.0-8cross1 gcc-9-mips64el-linux-gnuabi64_9.3.0-8cross1 gcc-9-mips64el-linux-gnuabi64-base_9.3.0-8cross1 gcc-mips64el-linux-gnuabi64_4:9.2.1-4.1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.1.6 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2 libasan5_9.3.0-14 libatomic1_10.1.0-4 libatomic1-mips64el-cross_10-20200324-1cross1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3+b1 libbinutils_2.34-8 libblkid1_2.35.2-6 libbrotli1_1.0.7-6.1 libbz2-1.0_1.0.8-3 libc-bin_2.30-8 libc-dev-bin_2.30-8 libc6_2.30-8 libc6-dev_2.30-8 libc6-dev-mips64el-cross_2.30-2cross1 libc6-mips64el-cross_2.30-2cross1 libcap-ng0_0.7.9-2.2 libcc1-0_10.1.0-4 libcom-err2_1.45.6-1 libconfig-auto-perl_0.44-1 libconfig-inifiles-perl_3.000003-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libcryptsetup12_2:2.3.3-1 libctf-nobfd0_2.34-8 libctf0_2.34-8 libcurl3-gnutls_7.68.0-1 libcurl4-gnutls-dev_7.68.0-1 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdebian-dpkgcross-perl_2.6.15-3.1 libdevmapper1.02.1_2:1.02.167-1+b1 libdpkg-perl_1.20.3 libelf1_0.176-1.1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.2-6 libffi6_3.2.1-9 libffi7_3.3-4 libfile-homedir-perl_1.004-1 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libgcc-9-dev_9.3.0-14 libgcc-9-dev-mips64el-cross_9.3.0-8cross1 libgcc-s1_10.1.0-4 libgcc-s1-mips64el-cross_10-20200324-1cross1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libglib2.0-0_2.64.3-2 libgmp10_2:6.2.0+dfsg-6 libgnutls30_3.6.14-2 libgomp1_10.1.0-4 libgomp1-mips64el-cross_10-20200324-1cross1 libgpg-error0_1.38-2 libgssapi-krb5-2_1.17-10 libhogweed4_3.5.1+really3.4.1-1 libhogweed5_3.5.1+really3.5.1-2 libhtscodecs-dev_0.5-3 libhtscodecs2_0.5-3 libicu67_67.1-2 libidn2-0_2.3.0-1 libio-string-perl_1.08-3 libisl19_0.20-2 libisl22_0.22.1-1 libitm1_10.1.0-4 libjson-c4_0.13.1+dfsg-9 libk5crypto3_1.17-10 libkeyutils1_1.6.1-2 libkrb5-3_1.17-10 libkrb5support0_1.17-10 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblocale-gettext-perl_1.07-4 liblsan0_10.1.0-4 liblz4-1_1.9.2-2 liblzma5_5.2.4-1+b1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.2-6 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmpx2_8.4.0-4 libncursesw6_6.2-1 libnettle6_3.5.1+really3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.41.0-2 libp11-kit0_0.23.20-1 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.30_5.30.3-4 libpipeline1_1.5.2-2 libpsl5_0.21.0-1.1 libquadmath0_10.1.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+b1 libselinux1_3.0-1+b3 libsemanage-common_3.0-1 libsemanage1_3.0-1+b3 libsepol1_3.0-1 libsigsegv2_2.12-2 libsmartcols1_2.35.2-6 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-14 libstdc++-9-dev-mips64el-cross_9.3.0-8cross1 libstdc++6_10.1.0-4 libstdc++6-mips64el-cross_10-20200324-1cross1 libsub-override-perl_0.09-2 libsystemd0_245.6-1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libtsan0_10.1.0-4 libubsan1_10.1.0-4 libuchardet0_0.0.7-1 libudev1_245.6-1 libunistring2_0.9.10-4 libuuid1_2.35.2-6 libxml-libxml-perl_2.0134+dfsg-2 libxml-namespacesupport-perl_1.12-1 libxml-sax-base-perl_1.09-1 libxml-sax-perl_1.02+dfsg-1 libxml-simple-perl_2.25-1 libxml2_2.9.10+dfsg-5+b1 libyaml-perl_1.30-1 libzstd1_1.4.5+dfsg-3 linux-libc-dev_5.7.6-1 linux-libc-dev-mips64el-cross_5.4.19-1cross1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0 m4_1.4.18-4 make_4.3-4 man-db_2.9.3-1 mawk_1.3.4.20200120-2 mount_2.35.2-6 ncurses-base_6.2-1 ncurses-bin_6.2-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.28_5.28.1-6 perl-modules-5.30_5.30.3-4 po-debconf_1.0.21 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0043 util-linux_2.35.2-6 xz-utils_5.2.4-1+b1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: staden-io-lib Binary: staden-io-lib-utils, libstaden-read-dev, libstaden-read14, staden-io-lib-examples Architecture: any all Version: 1.14.12-2 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille , Thorsten Alteholz , Michael R. Crusoe Homepage: https://github.com/jkbonfield/io_lib Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/staden-io-lib Vcs-Git: https://salsa.debian.org/med-team/staden-io-lib.git Testsuite: autopkgtest Testsuite-Triggers: smalt-examples Build-Depends: debhelper-compat (= 12), zlib1g-dev, libcurl4-gnutls-dev | libcurl4-nss-dev, libhtscodecs-dev, d-shlibs Package-List: libstaden-read-dev deb libdevel optional arch=any libstaden-read14 deb libs optional arch=any staden-io-lib-examples deb science optional arch=all staden-io-lib-utils deb science optional arch=any Checksums-Sha1: a65bfd4cd7325193ddc49f10a31f8f03d25830c4 3367005 staden-io-lib_1.14.12.orig.tar.gz f967550fd291ff4674cce73a353752a33dd0f979 15956 staden-io-lib_1.14.12-2.debian.tar.xz Checksums-Sha256: 34339605809bfef30874792d7ec44b7d399cbdfa1bf5fb868237429339a0ef99 3367005 staden-io-lib_1.14.12.orig.tar.gz 5138db587ec60326e56f5e00d7b70d2363c71e23e8d31087e6c1fac167c543d0 15956 staden-io-lib_1.14.12-2.debian.tar.xz Files: c49b2d08035b7e1ff062aea1c44b2aa5 3367005 staden-io-lib_1.14.12.orig.tar.gz c7f2ca5068520a74350ba790d7149253 15956 staden-io-lib_1.14.12-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl7GYvcACgkQPCZ2P2xn 5uJhQg//XnnMgsKM5W5etwSo5gN9CVc5opT29N109m6DzGcsGf8U6YPj3uNJUqwu 3xT1eSkan8/7caHSKCGXs/PF5KjKRXZ+RLRBC/7CPykwZ7EEZj8HZ7cv8zVQdcJU kynaE15pyjeK3i/oVoZGYMjq6N1BVgVNTbKKLCfPNDR543gIvtG9FnVFoW7OxJV8 b6lWToUeQdGWOi3qLj/oul+jvkv6QEM+rzo0V/sBrorUX3sKT6SlAVpNThqHItee h2Mp86pNXtum7mnVR3za37P6JHp3612RRNRS+Lo4AU80jsgfO0GOSNlNWwgAP3ij s2bOZg45Cu7hP005ygTRAMxLDT9NwOCDpi1N1mR1QsFEwBm6dekPMFE44f91/ZqA L8BTE0LDS/4Ii99PAGC6XRBycW2KhFJm22tabZwiWATZ2q6/TLjMV95HgrQ+iTdM BSm3+roArerGjv6BsjUevkjMqqp/lQwWtez7/iJXHXGVxeXKgkGHav03Cd4cfvL8 AIM7Xzzk29O/YSV1SQ8TlibyV1bj/MooHiX4CUsU3Dr60yHnYzjVLHfVp1zkDPFQ jef3hHqDot5ObC2eh7Be0uBWl+/Qn5m5x+EW51IWt027z/WfNbOI5jPDLh7G4sOn LYEFv9NuJJ/BvDvgbv3G9Tb0l2nOtKSHr9A0Us4US7nW7B+npUo= =pTJ2 -----END PGP SIGNATURE----- gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu May 21 11:16:07 2020 UTC gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./staden-io-lib_1.14.12-2.dsc dpkg-source: info: extracting staden-io-lib in /<> dpkg-source: info: unpacking staden-io-lib_1.14.12.orig.tar.gz dpkg-source: info: unpacking staden-io-lib_1.14.12-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying s390x.patch dpkg-source: info: applying pathmax.patch dpkg-source: info: applying fix_fseeko.patch dpkg-source: info: applying spelling dpkg-source: info: applying usedebianhtscodecs.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-162eb9c6-9495-4540-8a5e-fa5bd455c4f6 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package staden-io-lib dpkg-buildpackage: info: source version 1.14.12-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -f tests/.done tests/data/ce\#sorted.sam tests/data/ce\#unsorted.sam rm -f config.sub config.guess ## ## Try to verify correct ABI version right in the beginning ## Strangely enough d-shlibmove fails in detecting it in this package ## Since upstream build system creates libstaden-read.so.11.1.0 this code is not ## activated but it should be considered in case of future problems with ABI version ## #UPSTREAMABI=`grep ^VERS_CURRENT configure.in | sed 's/^VERS_CURRENT[[:space:]]*=\([0-9]\+\)[[:space:]]*/\1/'` ; \ #DEBABI=`grep '^Package: libstaden-read[0-9]\+' debian/control | sed 's/Package: libstaden-read\([0-9]\+\)/\1/'` ; \ #if [ ${UPSTREAMABI} -ne ${DEBABI} ] ; then \ # echo "Upstream has bumped ABI to ${UPSTREAMABI} but Debian is using libstaden-read${DEBABI} (see bug #710225)" ; \ # exit 1 ; \ #fi make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch --no-parallel dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:74: installing './compile' configure.ac:76: installing './config.guess' configure.ac:76: installing './config.sub' configure.ac:5: installing './install-sh' configure.ac:5: installing './missing' io_lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' export ac_cv_func_mmap_fixed_mapped=yes && dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/mips64el-linux-gnuabi64 --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mips64el-linux-gnuabi64 configure: loading site script /etc/dpkg-cross/cross-config.mips64el checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mips64el-linux-gnuabi64-strip... mips64el-linux-gnuabi64-strip checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for mips64el-linux-gnuabi64-gcc... mips64el-linux-gnuabi64-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether mips64el-linux-gnuabi64-gcc accepts -g... yes checking for mips64el-linux-gnuabi64-gcc option to accept ISO C89... none needed checking whether mips64el-linux-gnuabi64-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of mips64el-linux-gnuabi64-gcc... none checking build system type... x86_64-pc-linux-gnu checking host system type... mips64el-unknown-linux-gnuabi64 checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by mips64el-linux-gnuabi64-gcc... /usr/mips64el-linux-gnuabi64/bin/ld checking if the linker (/usr/mips64el-linux-gnuabi64/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/mips64el-linux-gnuabi64-nm -B checking the name lister (/usr/bin/mips64el-linux-gnuabi64-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to mips64el-unknown-linux-gnuabi64 format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/mips64el-linux-gnuabi64/bin/ld option to reload object files... -r checking for mips64el-linux-gnuabi64-objdump... mips64el-linux-gnuabi64-objdump checking how to recognize dependent libraries... pass_all checking for mips64el-linux-gnuabi64-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for mips64el-linux-gnuabi64-ar... mips64el-linux-gnuabi64-ar checking for archiver @FILE support... @ checking for mips64el-linux-gnuabi64-strip... (cached) mips64el-linux-gnuabi64-strip checking for mips64el-linux-gnuabi64-ranlib... mips64el-linux-gnuabi64-ranlib checking command to parse /usr/bin/mips64el-linux-gnuabi64-nm -B output from mips64el-linux-gnuabi64-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mips64el-linux-gnuabi64-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... mips64el-linux-gnuabi64-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if mips64el-linux-gnuabi64-gcc supports -fno-rtti -fno-exceptions... no checking for mips64el-linux-gnuabi64-gcc option to produce PIC... -fPIC -DPIC checking if mips64el-linux-gnuabi64-gcc PIC flag -fPIC -DPIC works... yes checking if mips64el-linux-gnuabi64-gcc static flag -static works... yes checking if mips64el-linux-gnuabi64-gcc supports -c -o file.o... yes checking if mips64el-linux-gnuabi64-gcc supports -c -o file.o... (cached) yes checking whether the mips64el-linux-gnuabi64-gcc linker (/usr/mips64el-linux-gnuabi64/bin/ld -m elf64ltsmip) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for grep that handles long lines and -e... (cached) /bin/grep checking for C compiler warning flags... -Wall checking for gawk... (cached) mawk checking for curl-config... /usr/bin/curl-config checking for the version of libcurl... 7.68.0 checking whether libcurl just needs -lcurl... yes checking whether libcurl is usable... yes checking for curl_free... yes checking for inflateEnd in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for library containing gethostbyname... none required checking for library containing socket... none required checking for BZ2_bzBuffToBuffCompress in -lbz2... no checking for lzma_easy_buffer_encode in -llzma... no checking for bsc_compress in -lbsc... no checking whether byte ordering is bigendian... no checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for unistd.h... (cached) yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for zlib.h... (cached) yes checking stdio_ext.h usability... yes checking stdio_ext.h presence... yes checking for stdio_ext.h... yes checking whether byte ordering is bigendian... (cached) no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking for inline... inline checking for mode_t... yes checking for fileno... yes checking for fstat... yes checking for mallopt... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... (cached) yes checking for library containing pthread_join... -lpthread checking for library containing cos... -lm checking for strdup... yes checking for fsync... yes checking that generated files are newer than configure... done === configuring in htscodecs (/<>/htscodecs) configure: WARNING: no configuration information is in htscodecs configure: creating ./config.status config.status: creating Makefile config.status: creating io_lib/Makefile config.status: creating progs/Makefile config.status: creating tests/Makefile config.status: creating io_lib-config config.status: creating io_lib/os.h config.status: creating io_lib_config.h config.status: executing depfiles commands config.status: executing libtool commands make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in io_lib make[3]: Entering directory '/<>/io_lib' /bin/bash ../libtool --tag=CC --mode=compile 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-D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -o libstaden_read_la-scf_extras.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -fPIC -DPIC -o .libs/libstaden_read_la-translate.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -o libstaden_read_la-translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o 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-I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -o libstaden_read_la-ztr_translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. 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-I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOPlain.c -o libstaden_read_la-seqIOPlain.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-misc_scf.lo `test -f 'misc_scf.c' || echo './'`misc_scf.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c misc_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-misc_scf.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 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>/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-sff.lo `test -f 'sff.c' || echo './'`sff.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sff.c -fPIC -DPIC -o .libs/libstaden_read_la-sff.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sff.c -o libstaden_read_la-sff.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-srf.lo `test -f 'srf.c' || echo './'`srf.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c srf.c -fPIC -DPIC -o .libs/libstaden_read_la-srf.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c srf.c -o libstaden_read_la-srf.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. 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-I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_stats.c -o libstaden_read_la-cram_stats.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-cram_io.lo `test -f 'cram_io.c' || echo './'`cram_io.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_io.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_io.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 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-Werror=format-security -c cram_index.c -o libstaden_read_la-cram_index.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-zfio.lo `test -f 'zfio.c' || echo './'`zfio.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c zfio.c -fPIC -DPIC -o .libs/libstaden_read_la-zfio.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c zfio.c -o libstaden_read_la-zfio.o >/dev/null 2>&1 /bin/bash 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-I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-string_alloc.lo `test -f 'string_alloc.c' || echo './'`string_alloc.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c string_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-string_alloc.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c string_alloc.c -o libstaden_read_la-string_alloc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-md5.lo `test -f 'md5.c' || echo './'`md5.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c md5.c -fPIC -DPIC -o .libs/libstaden_read_la-md5.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c md5.c -o libstaden_read_la-md5.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-crc32.lo `test -f 'crc32.c' || echo './'`crc32.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c crc32.c -fPIC -DPIC -o .libs/libstaden_read_la-crc32.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c crc32.c -o libstaden_read_la-crc32.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-scram.lo `test -f 'scram.c' || echo './'`scram.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scram.c -fPIC -DPIC -o .libs/libstaden_read_la-scram.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scram.c -o libstaden_read_la-scram.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-thread_pool.lo `test -f 'thread_pool.c' || echo './'`thread_pool.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c thread_pool.c -fPIC -DPIC -o .libs/libstaden_read_la-thread_pool.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c thread_pool.c -o libstaden_read_la-thread_pool.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-binning.lo `test -f 'binning.c' || echo './'`binning.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 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-Werror=format-security -c cram_bambam.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_bambam.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_bambam.c -o libstaden_read_la-cram_bambam.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-bgzip.lo `test -f 'bgzip.c' || echo './'`bgzip.c libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bgzip.c -fPIC -DPIC -o .libs/libstaden_read_la-bgzip.o libtool: compile: mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bgzip.c -o libstaden_read_la-bgzip.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 14:0:0 -Wl,-z,relro -Wl,-z,now -o libstaden-read.la -rpath /usr/lib/mips64el-linux-gnuabi64 libstaden_read_la-Read.lo libstaden_read_la-scf_extras.lo libstaden_read_la-translate.lo libstaden_read_la-compression.lo libstaden_read_la-ztr.lo libstaden_read_la-ztr_translate.lo libstaden_read_la-deflate_interlaced.lo libstaden_read_la-fpoint.lo libstaden_read_la-seqIOABI.lo libstaden_read_la-seqIOALF.lo libstaden_read_la-expFileIO.lo libstaden_read_la-seqIOPlain.lo libstaden_read_la-misc_scf.lo 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libstaden_read_la-scram.lo libstaden_read_la-thread_pool.lo libstaden_read_la-binning.lo libstaden_read_la-cram_bambam.lo libstaden_read_la-bgzip.lo -lz -lcurl -lhtscodecs -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -shared -fPIC -DPIC .libs/libstaden_read_la-Read.o .libs/libstaden_read_la-scf_extras.o .libs/libstaden_read_la-translate.o .libs/libstaden_read_la-compression.o .libs/libstaden_read_la-ztr.o .libs/libstaden_read_la-ztr_translate.o .libs/libstaden_read_la-deflate_interlaced.o .libs/libstaden_read_la-fpoint.o .libs/libstaden_read_la-seqIOABI.o .libs/libstaden_read_la-seqIOALF.o .libs/libstaden_read_la-expFileIO.o .libs/libstaden_read_la-seqIOPlain.o .libs/libstaden_read_la-misc_scf.o .libs/libstaden_read_la-read_scf.o .libs/libstaden_read_la-write_scf.o .libs/libstaden_read_la-sff.o .libs/libstaden_read_la-srf.o .libs/libstaden_read_la-array.o .libs/libstaden_read_la-compress.o .libs/libstaden_read_la-error.o .libs/libstaden_read_la-files.o .libs/libstaden_read_la-find.o .libs/libstaden_read_la-mach-io.o .libs/libstaden_read_la-open_trace_file.o .libs/libstaden_read_la-read_alloc.o .libs/libstaden_read_la-strings.o .libs/libstaden_read_la-traceType.o .libs/libstaden_read_la-xalloc.o .libs/libstaden_read_la-vlen.o .libs/libstaden_read_la-hash_table.o .libs/libstaden_read_la-jenkins_lookup3.o .libs/libstaden_read_la-mFILE.o .libs/libstaden_read_la-pooled_alloc.o .libs/libstaden_read_la-bam.o .libs/libstaden_read_la-sam_header.o .libs/libstaden_read_la-cram_codecs.o .libs/libstaden_read_la-cram_encode.o .libs/libstaden_read_la-cram_decode.o .libs/libstaden_read_la-cram_stats.o .libs/libstaden_read_la-cram_io.o .libs/libstaden_read_la-cram_index.o .libs/libstaden_read_la-zfio.o .libs/libstaden_read_la-dstring.o .libs/libstaden_read_la-string_alloc.o .libs/libstaden_read_la-md5.o .libs/libstaden_read_la-crc32.o .libs/libstaden_read_la-scram.o .libs/libstaden_read_la-thread_pool.o .libs/libstaden_read_la-binning.o .libs/libstaden_read_la-cram_bambam.o .libs/libstaden_read_la-bgzip.o -lz /usr/lib/mips64el-linux-gnuabi64/libcurl-gnutls.so -lhtscodecs -lm -lpthread -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -pthread -Wl,-soname -Wl,libstaden-read.so.14 -o .libs/libstaden-read.so.14.0.0 libtool: link: (cd ".libs" && rm -f "libstaden-read.so.14" && ln -s "libstaden-read.so.14.0.0" "libstaden-read.so.14") libtool: link: (cd ".libs" && rm -f "libstaden-read.so" && ln -s "libstaden-read.so.14.0.0" "libstaden-read.so") libtool: link: mips64el-linux-gnuabi64-ar cr .libs/libstaden-read.a libstaden_read_la-Read.o libstaden_read_la-scf_extras.o libstaden_read_la-translate.o libstaden_read_la-compression.o libstaden_read_la-ztr.o libstaden_read_la-ztr_translate.o libstaden_read_la-deflate_interlaced.o libstaden_read_la-fpoint.o libstaden_read_la-seqIOABI.o libstaden_read_la-seqIOALF.o libstaden_read_la-expFileIO.o libstaden_read_la-seqIOPlain.o libstaden_read_la-misc_scf.o libstaden_read_la-read_scf.o libstaden_read_la-write_scf.o libstaden_read_la-sff.o libstaden_read_la-srf.o libstaden_read_la-array.o libstaden_read_la-compress.o libstaden_read_la-error.o libstaden_read_la-files.o libstaden_read_la-find.o libstaden_read_la-mach-io.o libstaden_read_la-open_trace_file.o libstaden_read_la-read_alloc.o libstaden_read_la-strings.o libstaden_read_la-traceType.o libstaden_read_la-xalloc.o libstaden_read_la-vlen.o libstaden_read_la-hash_table.o libstaden_read_la-jenkins_lookup3.o libstaden_read_la-mFILE.o libstaden_read_la-pooled_alloc.o libstaden_read_la-bam.o libstaden_read_la-sam_header.o libstaden_read_la-cram_codecs.o libstaden_read_la-cram_encode.o libstaden_read_la-cram_decode.o libstaden_read_la-cram_stats.o libstaden_read_la-cram_io.o libstaden_read_la-cram_index.o libstaden_read_la-zfio.o libstaden_read_la-dstring.o libstaden_read_la-string_alloc.o libstaden_read_la-md5.o libstaden_read_la-crc32.o libstaden_read_la-scram.o libstaden_read_la-thread_pool.o libstaden_read_la-binning.o libstaden_read_la-cram_bambam.o libstaden_read_la-bgzip.o libtool: link: mips64el-linux-gnuabi64-ranlib .libs/libstaden-read.a libtool: link: ( cd ".libs" && rm -f "libstaden-read.la" && ln -s "../libstaden-read.la" "libstaden-read.la" ) make[3]: Leaving directory '/<>/io_lib' Making all in progs make[3]: Entering directory '/<>/progs' mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o convert_trace.o convert_trace.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o convert_trace convert_trace.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. 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-D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_tar.o hash_tar.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o hash_tar hash_tar.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/hash_tar hash_tar.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_extract.o hash_extract.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. 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-I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_sff.o hash_sff.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o hash_sff hash_sff.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/hash_sff hash_sff.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o append_sff.o append_sff.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 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-DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf_index_hash.o srf_index_hash.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf_index_hash srf_index_hash.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf_index_hash srf_index_hash.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf_extract_linear.o srf_extract_linear.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf_extract_linear srf_extract_linear.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf_extract_linear srf_extract_linear.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf_extract_hash.o srf_extract_hash.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf_extract_hash srf_extract_hash.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf_extract_hash srf_extract_hash.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf2fastq.o srf2fastq.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf2fastq srf2fastq.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf2fastq srf2fastq.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf2fasta.o srf2fasta.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf2fasta srf2fasta.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf2fasta srf2fasta.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf_filter.o srf_filter.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf_filter srf_filter.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf_filter srf_filter.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf_info.o srf_info.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf_info srf_info.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf_info srf_info.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o srf_list.o srf_list.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o srf_list srf_list.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/srf_list srf_list.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_exp.o hash_exp.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o hash_exp hash_exp.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/hash_exp hash_exp.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_dump.o cram_dump.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_dump cram_dump.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_dump cram_dump.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_index.o cram_index.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_index cram_index.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_index cram_index.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scramble.o scramble.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scramble scramble.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scramble scramble.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_merge.o scram_merge.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_merge scram_merge.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_merge scram_merge.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_pileup.o scram_pileup.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_pileup scram_pileup.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_pileup scram_pileup.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_flagstat.o scram_flagstat.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_flagstat scram_flagstat.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_flagstat scram_flagstat.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_test.o scram_test.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_test scram_test.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_test scram_test.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_size.o cram_size.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_size cram_size.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_size cram_size.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_filter.o cram_filter.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_filter cram_filter.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_filter cram_filter.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread make[3]: Leaving directory '/<>/progs' Making all in tests make[3]: Entering directory '/<>/tests' mips64el-linux-gnuabi64-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_io_test.o cram_io_test.c /bin/bash ../libtool --tag=CC --mode=link mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_io_test cram_io_test.o ../io_lib/libstaden-read.la -lm -lpthread libtool: link: mips64el-linux-gnuabi64-gcc -Wall -g -O2 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_io_test cram_io_test.o ../io_lib/.libs/libstaden-read.so -lm -lpthread -pthread make[3]: Leaving directory '/<>/tests' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_testroot -a dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in io_lib make[2]: Entering directory '/<>/io_lib' make[3]: Entering directory '/<>/io_lib' /bin/mkdir -p '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64' /bin/bash ../libtool --mode=install /usr/bin/install -c libstaden-read.la '/<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/libstaden-read.so.14.0.0 /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.so.14.0.0 libtool: install: (cd /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64 && { ln -s -f libstaden-read.so.14.0.0 libstaden-read.so.14 || { rm -f libstaden-read.so.14 && ln -s libstaden-read.so.14.0.0 libstaden-read.so.14; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64 && { ln -s -f libstaden-read.so.14.0.0 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.14.0.0 libstaden-read.so; }; }) libtool: install: /usr/bin/install -c .libs/libstaden-read.lai /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.la libtool: install: /usr/bin/install -c .libs/libstaden-read.a /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.a libtool: install: mips64el-linux-gnuabi64-ranlib /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.a libtool: warning: remember to run 'libtool --finish /usr/lib/mips64el-linux-gnuabi64' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/io_lib' make[2]: Leaving directory '/<>/io_lib' Making install in progs make[2]: Entering directory '/<>/progs' make[3]: Entering directory '/<>/progs' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c convert_trace makeSCF extract_seq extract_qual extract_fastq index_tar scf_dump scf_info scf_update get_comment hash_tar hash_extract hash_list trace_dump hash_sff append_sff ztr_dump srf_dump_all srf_index_hash srf_extract_linear srf_extract_hash srf2fastq srf2fasta srf_filter srf_info srf_list hash_exp cram_dump cram_index scramble scram_merge scram_pileup scram_flagstat scram_test cram_size cram_filter '/<>/debian/tmp/usr/bin' libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/convert_trace /<>/debian/tmp/usr/bin/convert_trace libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/makeSCF /<>/debian/tmp/usr/bin/makeSCF libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/extract_seq /<>/debian/tmp/usr/bin/extract_seq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/extract_qual /<>/debian/tmp/usr/bin/extract_qual libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/extract_fastq /<>/debian/tmp/usr/bin/extract_fastq libtool: install: /usr/bin/install -c index_tar /<>/debian/tmp/usr/bin/index_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scf_dump /<>/debian/tmp/usr/bin/scf_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scf_info /<>/debian/tmp/usr/bin/scf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scf_update /<>/debian/tmp/usr/bin/scf_update libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/get_comment /<>/debian/tmp/usr/bin/get_comment libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/hash_tar /<>/debian/tmp/usr/bin/hash_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/hash_extract /<>/debian/tmp/usr/bin/hash_extract libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/hash_list /<>/debian/tmp/usr/bin/hash_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/trace_dump /<>/debian/tmp/usr/bin/trace_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/hash_sff /<>/debian/tmp/usr/bin/hash_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/append_sff /<>/debian/tmp/usr/bin/append_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/ztr_dump /<>/debian/tmp/usr/bin/ztr_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf_dump_all /<>/debian/tmp/usr/bin/srf_dump_all libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf_index_hash /<>/debian/tmp/usr/bin/srf_index_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf_extract_linear /<>/debian/tmp/usr/bin/srf_extract_linear libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf_extract_hash /<>/debian/tmp/usr/bin/srf_extract_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf2fastq /<>/debian/tmp/usr/bin/srf2fastq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf2fasta /<>/debian/tmp/usr/bin/srf2fasta libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf_filter /<>/debian/tmp/usr/bin/srf_filter libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf_info /<>/debian/tmp/usr/bin/srf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/srf_list /<>/debian/tmp/usr/bin/srf_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/hash_exp /<>/debian/tmp/usr/bin/hash_exp libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/cram_dump /<>/debian/tmp/usr/bin/cram_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/cram_index /<>/debian/tmp/usr/bin/cram_index libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scramble /<>/debian/tmp/usr/bin/scramble libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scram_merge /<>/debian/tmp/usr/bin/scram_merge libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scram_pileup /<>/debian/tmp/usr/bin/scram_pileup libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scram_flagstat /<>/debian/tmp/usr/bin/scram_flagstat libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/scram_test /<>/debian/tmp/usr/bin/scram_test libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/cram_size /<>/debian/tmp/usr/bin/cram_size libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/mips64el-linux-gnuabi64' libtool: install: /usr/bin/install -c .libs/cram_filter /<>/debian/tmp/usr/bin/cram_filter make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/progs' make[2]: Leaving directory '/<>/progs' Making install in tests make[2]: Entering directory '/<>/tests' make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/tests' make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c io_lib-config '/<>/debian/tmp/usr/bin' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 man/man1/srf_index_hash.1 man/man1/srf_info.1 man/man1/srf_list.1 man/man1/srf2fasta.1 man/man1/srf2fastq.1 man/man1/scramble.1 '/<>/debian/tmp/usr/share/man/man1' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man3' /usr/bin/install -c -m 644 man/man3/read_scf_header.3 man/man3/read_allocate.3 man/man3/ExperimentFile.3 man/man3/write_reading.3 man/man3/write_scf.3 man/man3/read_deallocate.3 man/man3/fwrite_reading.3 man/man3/read2scf.3 man/man3/scf2read.3 man/man3/fwrite_scf.3 man/man3/write_scf_header.3 man/man3/read_reading.3 man/man3/read_scf.3 man/man3/exp2read.3 man/man3/fread_reading.3 man/man3/read2exp.3 man/man3/fread_scf.3 '/<>/debian/tmp/usr/share/man/man3' /bin/mkdir -p '/<>/debian/tmp/usr/share/man/man4' /usr/bin/install -c -m 644 man/man4/Read.4 '/<>/debian/tmp/usr/share/man/man4' /bin/mkdir -p '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/Read.h io_lib/scf_extras.h io_lib/translate.h io_lib/abi.h io_lib/fpoint.h io_lib/seqIOABI.h io_lib/alf.h io_lib/expFileIO.h io_lib/plain.h io_lib/scf.h io_lib/sff.h io_lib/array.h io_lib/compress.h io_lib/error.h io_lib/mach-io.h io_lib/misc.h io_lib/open_trace_file.h io_lib/tar_format.h io_lib/traceType.h io_lib/xalloc.h io_lib/mFILE.h io_lib/stdio_hack.h io_lib/vlen.h io_lib/hash_table.h io_lib/jenkins_lookup3.h io_lib/os.h io_lib/compression.h io_lib/ztr.h io_lib/deflate_interlaced.h io_lib/srf.h io_lib/pooled_alloc.h io_lib/cram.h io_lib/cram_structs.h io_lib/cram_io.h io_lib/cram_encode.h io_lib/cram_decode.h io_lib/cram_codecs.h io_lib/cram_index.h io_lib/cram_stats.h io_lib/zfio.h '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/scram.h io_lib/bam.h io_lib/sam_header.h io_lib/dstring.h io_lib/string_alloc.h io_lib_config.h io_lib/md5.h io_lib/thread_pool.h io_lib/binning.h io_lib/bgzip.h '/<>/debian/tmp/usr/include/io_lib' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' dh_install -a mkdir -p /<>/debian/libstaden-read-dev/usr/bin mv /<>/debian/staden-io-lib-utils/usr/bin/io_lib-config /<>/debian/libstaden-read-dev/usr/bin # # Call d-shlibmove to comply with library packaging guide d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev "debian/tmp/usr/include" usr \ --override s/libhtscodecs2-dev/libhtscodecs-dev/ \ debian/tmp/usr/lib/*/libstaden-read.so Library package automatic movement utility --> libcurl4-gnutls-dev package exists. --> libhtscodecs-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libstaden-read-dev/usr/lib/mips64el-linux-gnuabi64 install -d -m 755 debian/libstaden-read14/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.a debian/libstaden-read-dev/usr/lib/mips64el-linux-gnuabi64 mv debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.so debian/libstaden-read-dev/usr/lib/mips64el-linux-gnuabi64 mv /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.so.14 debian/libstaden-read14/usr/lib/mips64el-linux-gnuabi64 mv /<>/debian/tmp/usr/lib/mips64el-linux-gnuabi64/libstaden-read.so.14.0.0 debian/libstaden-read14/usr/lib/mips64el-linux-gnuabi64 PKGDEV=libstaden-read-dev PKGSHL=libstaden-read14 install -d -m 755 debian/libstaden-read-dev/usr mv debian/tmp/usr/include debian/libstaden-read-dev/usr # # make sure io_lib-config --libs will not return -pie (see #825461) find debian/*/usr/bin -name io_lib-config -exec sed -i -e 's/ *-fPIE//' -e 's/ *-pie//' \{\} \; make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_missing: warning: usr/share/man/man4/Read.4 exists in debian/tmp but is not installed to anywhere (related file: "man/man4/Read.4") dh_missing: warning: usr/share/man/man3/fread_scf.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/fread_scf.3") dh_missing: warning: usr/share/man/man3/read2exp.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/read2exp.3") dh_missing: warning: usr/share/man/man3/fread_reading.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/fread_reading.3") dh_missing: warning: usr/share/man/man3/exp2read.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/exp2read.3") dh_missing: warning: usr/share/man/man3/read_scf.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/read_scf.3") dh_missing: warning: usr/share/man/man3/read_reading.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/read_reading.3") dh_missing: warning: usr/share/man/man3/write_scf_header.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/write_scf_header.3") dh_missing: warning: usr/share/man/man3/fwrite_scf.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/fwrite_scf.3") dh_missing: warning: usr/share/man/man3/scf2read.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/scf2read.3") dh_missing: warning: usr/share/man/man3/read2scf.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/read2scf.3") dh_missing: warning: usr/share/man/man3/fwrite_reading.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/fwrite_reading.3") dh_missing: warning: usr/share/man/man3/read_deallocate.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/read_deallocate.3") dh_missing: warning: usr/share/man/man3/write_scf.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/write_scf.3") dh_missing: warning: usr/share/man/man3/write_reading.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/write_reading.3") dh_missing: warning: usr/share/man/man3/ExperimentFile.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/ExperimentFile.3") dh_missing: warning: usr/share/man/man3/read_allocate.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/read_allocate.3") dh_missing: warning: usr/share/man/man3/read_scf_header.3 exists in debian/tmp but is not installed to anywhere (related file: "man/man3/read_scf_header.3") dh_missing: warning: usr/lib/mips64el-linux-gnuabi64/libstaden-read.la exists in debian/tmp but is not installed to anywhere Some of the files had a file that looked similar to a missing counter part. Perhaps one of the debhelper tools should installed the missing file instead of its related file assuming the content is identical. As an example, perhaps you want to replace: * man/man4/Read.4 with: * usr/share/man/man4/Read.4 in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: libstaden-read-dev (0), libstaden-read14 (0), staden-io-lib-examples (3), staden-io-lib-utils (37) * dh_installdocs: libstaden-read-dev (0), libstaden-read14 (0), staden-io-lib-examples (0), staden-io-lib-utils (4) * dh_installman: libstaden-read-dev (18), libstaden-read14 (0), staden-io-lib-examples (0), staden-io-lib-utils (9) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'staden-io-lib-utils' in '../staden-io-lib-utils_1.14.12-2_mips64el.deb'. dpkg-deb: building package 'staden-io-lib-utils-dbgsym' in '../staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb'. dpkg-deb: building package 'libstaden-read-dev' in '../libstaden-read-dev_1.14.12-2_mips64el.deb'. dpkg-deb: building package 'libstaden-read14' in '../libstaden-read14_1.14.12-2_mips64el.deb'. dpkg-deb: building package 'libstaden-read14-dbgsym' in '../libstaden-read14-dbgsym_1.14.12-2_mips64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../staden-io-lib_1.14.12-2_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-07-04T22:03:32Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ staden-io-lib_1.14.12-2_mips64el.changes: ----------------------------------------- Format: 1.8 Date: Thu, 21 May 2020 13:13:22 +0200 Source: staden-io-lib Binary: libstaden-read-dev libstaden-read14 libstaden-read14-dbgsym staden-io-lib-utils staden-io-lib-utils-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 1.14.12-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libstaden-read-dev - development files for libstaden-read libstaden-read14 - Staden library for reading and writing DNA sequencing results staden-io-lib-utils - programs for manipulating DNA sequencing files Changes: staden-io-lib (1.14.12-2) unstable; urgency=medium . * File more spelling typos * Install upstream's manual pages * include symbols in the package * debian/control: fix typo in the package descriptions * debian/rules: add hack to autoconf not forget MMAP with cross building * debian/patches/s390x: applied patch from upstream to fix big endian builds * debian/patches/usedebianhtscodecs.patch: added DEP-3 patch metadata * debian/upstream/metadata: added repository & bug entries Checksums-Sha1: 55e131f00a3fc36f846454c45ad47032d137fe40 353160 libstaden-read-dev_1.14.12-2_mips64el.deb d687e6bd4c13a5995aea735cc2fb2ef4213cf4d5 560988 libstaden-read14-dbgsym_1.14.12-2_mips64el.deb 20220b8278bb6f8840fc4dcf25798812fbb196d2 243708 libstaden-read14_1.14.12-2_mips64el.deb 7ef72d093b0834ee8ed82ac3e360e420887b4dc6 278852 staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb 83e079c65851f0a4d1483ee5e6d7d7263b226dac 170620 staden-io-lib-utils_1.14.12-2_mips64el.deb 760e3fb74ec8d96af6c79b8f75bc1d91542d251b 6829 staden-io-lib_1.14.12-2_mips64el.buildinfo Checksums-Sha256: 972743c829edb4a0a94fcfbc764607032f51ef11b5d505e7e7025b20daca13cf 353160 libstaden-read-dev_1.14.12-2_mips64el.deb 5a08adc32d32e4e98eb91aad070e7b0888c8111eb957844cae232c0db42aee4b 560988 libstaden-read14-dbgsym_1.14.12-2_mips64el.deb 91a4ebf219abc6157a676feb0ac8d6aca951eabf5ce9ddc0a3a6578fc30c9b2d 243708 libstaden-read14_1.14.12-2_mips64el.deb b2c05563acb3d455c6c70774cdeb4fc40ba46b472c2e863fe6aa72a8abef3a16 278852 staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb f65fc900a3d587dc26b87db36f4c942a9d4539137040cfc8ed99da7fe54e2d0e 170620 staden-io-lib-utils_1.14.12-2_mips64el.deb 30ed6df0bb550dc39f08f7a0e2e5f180b789a094010afcf9ccfea7230e6f8fb7 6829 staden-io-lib_1.14.12-2_mips64el.buildinfo Files: eaae2b53f54f410e7e7d6a098bc108d7 353160 libdevel optional libstaden-read-dev_1.14.12-2_mips64el.deb 2191367f525deeeee161e280cbaa7d85 560988 debug optional libstaden-read14-dbgsym_1.14.12-2_mips64el.deb 1ba759cc726ad27b8c16c47607420d1d 243708 libs optional libstaden-read14_1.14.12-2_mips64el.deb d1fd79d57241e6ceb54d672a895e1d49 278852 debug optional staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb 5ce80c727c2a1a699cb2d83541ac2f14 170620 science optional staden-io-lib-utils_1.14.12-2_mips64el.deb a7e29296e177655e7d53553316c5f7d3 6829 science optional staden-io-lib_1.14.12-2_mips64el.buildinfo +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: staden-io-lib Binary: libstaden-read-dev libstaden-read14 libstaden-read14-dbgsym staden-io-lib-utils staden-io-lib-utils-dbgsym Architecture: mips64el Version: 1.14.12-2 Checksums-Md5: eaae2b53f54f410e7e7d6a098bc108d7 353160 libstaden-read-dev_1.14.12-2_mips64el.deb 2191367f525deeeee161e280cbaa7d85 560988 libstaden-read14-dbgsym_1.14.12-2_mips64el.deb 1ba759cc726ad27b8c16c47607420d1d 243708 libstaden-read14_1.14.12-2_mips64el.deb d1fd79d57241e6ceb54d672a895e1d49 278852 staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb 5ce80c727c2a1a699cb2d83541ac2f14 170620 staden-io-lib-utils_1.14.12-2_mips64el.deb Checksums-Sha1: 55e131f00a3fc36f846454c45ad47032d137fe40 353160 libstaden-read-dev_1.14.12-2_mips64el.deb d687e6bd4c13a5995aea735cc2fb2ef4213cf4d5 560988 libstaden-read14-dbgsym_1.14.12-2_mips64el.deb 20220b8278bb6f8840fc4dcf25798812fbb196d2 243708 libstaden-read14_1.14.12-2_mips64el.deb 7ef72d093b0834ee8ed82ac3e360e420887b4dc6 278852 staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb 83e079c65851f0a4d1483ee5e6d7d7263b226dac 170620 staden-io-lib-utils_1.14.12-2_mips64el.deb Checksums-Sha256: 972743c829edb4a0a94fcfbc764607032f51ef11b5d505e7e7025b20daca13cf 353160 libstaden-read-dev_1.14.12-2_mips64el.deb 5a08adc32d32e4e98eb91aad070e7b0888c8111eb957844cae232c0db42aee4b 560988 libstaden-read14-dbgsym_1.14.12-2_mips64el.deb 91a4ebf219abc6157a676feb0ac8d6aca951eabf5ce9ddc0a3a6578fc30c9b2d 243708 libstaden-read14_1.14.12-2_mips64el.deb b2c05563acb3d455c6c70774cdeb4fc40ba46b472c2e863fe6aa72a8abef3a16 278852 staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb f65fc900a3d587dc26b87db36f4c942a9d4539137040cfc8ed99da7fe54e2d0e 170620 staden-io-lib-utils_1.14.12-2_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 04 Jul 2020 22:03:32 +0000 Build-Path: /<> Installed-Build-Depends: adduser (= 3.118), apt (= 2.1.6), autoconf (= 2.69-11.1), automake (= 1:1.16.2-1), autopoint (= 0.19.8.1-10), autotools-dev (= 20180224.1), base-files (= 11), base-passwd (= 3.5.47), bash (= 5.0-6), binutils (= 2.34-8), binutils-common (= 2.34-8), binutils-x86-64-linux-gnu (= 2.34-8), bsdextrautils (= 2.35.2-6), bsdutils (= 1:2.35.2-6), build-essential (= 12.8), bzip2 (= 1.0.8-3), coreutils (= 8.32-2), cpp (= 4:9.2.1-3.1), cpp-9 (= 9.3.0-14), d-shlibs (= 0.93), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.1), debian-archive-keyring (= 2019.1), debianutils (= 4.11), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.8.1-1), diffutils (= 1:3.7-3), dmsetup (= 2:1.02.167-1+b1), dpkg (= 1.20.3), dpkg-dev (= 1.20.3), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1), g++ (= 4:9.2.1-3.1), g++-9 (= 9.3.0-14), gcc (= 4:9.2.1-3.1), gcc-10-base (= 10.1.0-4), gcc-9 (= 9.3.0-14), gcc-9-base (= 9.3.0-14), gettext (= 0.19.8.1-10), gettext-base (= 0.19.8.1-10), gpgv (= 2.2.20-1), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2), hostname (= 3.23), init-system-helpers (= 1.57), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libapt-pkg6.0 (= 2.1.6), libarchive-zip-perl (= 1.68-1), libargon2-1 (= 0~20171227-0.2), libasan5 (= 9.3.0-14), libatomic1 (= 10.1.0-4), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3), libaudit1 (= 1:2.8.5-3+b1), libbinutils (= 2.34-8), libblkid1 (= 2.35.2-6), libbrotli1 (= 1.0.7-6.1), libbz2-1.0 (= 1.0.8-3), libc-bin (= 2.30-8), libc-dev-bin (= 2.30-8), libc6 (= 2.30-8), libc6-dev (= 2.30-8), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.1.0-4), libcom-err2 (= 1.45.6-1), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1), libcrypt1 (= 1:4.4.16-1), libcryptsetup12 (= 2:2.3.3-1), libctf-nobfd0 (= 2.34-8), libctf0 (= 2.34-8), libcurl3-gnutls (= 7.68.0-1), libcurl4-gnutls-dev (= 7.68.0-1), libdb5.3 (= 5.3.28+dfsg1-0.6), libdebconfclient0 (= 0.252), libdebhelper-perl (= 13.1), libdevmapper1.02.1 (= 2:1.02.167-1+b1), libdpkg-perl (= 1.20.3), libelf1 (= 0.176-1.1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.8.1-1), libgcc-9-dev (= 9.3.0-14), libgcc-s1 (= 10.1.0-4), libgcrypt20 (= 1.8.5-5), libgdbm-compat4 (= 1.18.1-5), libgdbm6 (= 1.18.1-5), libglib2.0-0 (= 2.64.3-2), libgmp10 (= 2:6.2.0+dfsg-6), libgnutls30 (= 3.6.14-2), libgomp1 (= 10.1.0-4), libgpg-error0 (= 1.38-2), libgssapi-krb5-2 (= 1.17-10), libhogweed5 (= 3.5.1+really3.5.1-2), libhtscodecs-dev (= 0.5-3), libhtscodecs2 (= 0.5-3), libicu67 (= 67.1-2), libidn2-0 (= 2.3.0-1), libisl22 (= 0.22.1-1), libitm1 (= 10.1.0-4), libjson-c4 (= 0.13.1+dfsg-9), libk5crypto3 (= 1.17-10), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.17-10), libkrb5support0 (= 1.17-10), libldap-2.4-2 (= 2.4.50+dfsg-1), libldap-common (= 2.4.50+dfsg-1), liblsan0 (= 10.1.0-4), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1+b1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.35.2-6), libmpc3 (= 1.1.0-1), libmpfr6 (= 4.0.2-1), libnettle7 (= 3.5.1+really3.5.1-2), libnghttp2-14 (= 1.41.0-2), libp11-kit0 (= 0.23.20-1), libpam-modules (= 1.3.1-5), libpam-modules-bin (= 1.3.1-5), libpam-runtime (= 1.3.1-5), libpam0g (= 1.3.1-5), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.2-2), libpsl5 (= 0.21.0-1.1), libquadmath0 (= 10.1.0-4), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b1), libsasl2-2 (= 2.1.27+dfsg-2), libsasl2-modules-db (= 2.1.27+dfsg-2), libseccomp2 (= 2.4.3-1+b1), libselinux1 (= 3.0-1+b3), libsemanage-common (= 3.0-1), libsemanage1 (= 3.0-1+b3), libsepol1 (= 3.0-1), libsigsegv2 (= 2.12-2), libsmartcols1 (= 2.35.2-6), libssh2-1 (= 1.8.0-2.1), libssl1.1 (= 1.1.1g-1), libstdc++-9-dev (= 9.3.0-14), libstdc++6 (= 10.1.0-4), libsub-override-perl (= 0.09-2), libsystemd0 (= 245.6-1), libtasn1-6 (= 4.16.0-2), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libtsan0 (= 10.1.0-4), libubsan1 (= 10.1.0-4), libuchardet0 (= 0.0.7-1), libudev1 (= 245.6-1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.35.2-6), libxml2 (= 2.9.10+dfsg-5+b1), libzstd1 (= 1.4.5+dfsg-3), linux-libc-dev (= 5.7.6-1), login (= 1:4.8.1-1), lsb-base (= 11.1.0), m4 (= 1.4.18-4), make (= 4.3-4), man-db (= 2.9.3-1), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), passwd (= 1:4.8.1-1), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), sed (= 4.7-1), sensible-utils (= 0.0.12+nmu1), sysvinit-utils (= 2.96-3), tar (= 1.30+dfsg-7), util-linux (= 2.35.2-6), xz-utils (= 5.2.4-1+b1), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1590059602" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libstaden-read-dev_1.14.12-2_mips64el.deb ----------------------------------------- new Debian package, version 2.0. size 353160 bytes: control archive=2412 bytes. 799 bytes, 18 lines control 4054 bytes, 62 lines md5sums Package: libstaden-read-dev Source: staden-io-lib Version: 1.14.12-2 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 1590 Depends: libstaden-read14 (= 1.14.12-2), libcurl4-gnutls-dev, libhtscodecs-dev, zlib1g-dev Section: libdevel Priority: optional Homepage: https://github.com/jkbonfield/io_lib Description: development files for libstaden-read This package contains the header and development files needed to build programs and packages using the Staden io_lib. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2020-05-21 11:13 ./ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/bin/ -rwxr-xr-x root/root 905 2020-05-21 11:13 ./usr/bin/io_lib-config drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/include/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/include/io_lib/ -rw-r--r-- root/root 10263 2020-05-21 11:13 ./usr/include/io_lib/Read.h -rw-r--r-- root/root 2471 2020-05-21 11:13 ./usr/include/io_lib/abi.h -rw-r--r-- root/root 2480 2020-05-21 11:13 ./usr/include/io_lib/alf.h -rw-r--r-- root/root 3536 2020-05-21 11:13 ./usr/include/io_lib/array.h -rw-r--r-- root/root 24731 2020-05-21 11:13 ./usr/include/io_lib/bam.h -rw-r--r-- root/root 2398 2020-05-21 11:13 ./usr/include/io_lib/bgzip.h -rw-r--r-- root/root 2075 2020-05-21 11:13 ./usr/include/io_lib/binning.h -rw-r--r-- root/root 6268 2020-05-21 11:13 ./usr/include/io_lib/compress.h -rw-r--r-- root/root 15348 2020-05-21 11:13 ./usr/include/io_lib/compression.h -rw-r--r-- root/root 2405 2020-05-21 11:13 ./usr/include/io_lib/cram.h -rw-r--r-- root/root 8043 2020-05-21 11:13 ./usr/include/io_lib/cram_codecs.h -rw-r--r-- root/root 3612 2020-05-21 11:13 ./usr/include/io_lib/cram_decode.h -rw-r--r-- root/root 3769 2020-05-21 11:13 ./usr/include/io_lib/cram_encode.h -rw-r--r-- root/root 3365 2020-05-21 11:13 ./usr/include/io_lib/cram_index.h -rw-r--r-- root/root 17635 2020-05-21 11:13 ./usr/include/io_lib/cram_io.h -rw-r--r-- root/root 2587 2020-05-21 11:13 ./usr/include/io_lib/cram_stats.h -rw-r--r-- root/root 34142 2020-05-21 11:13 ./usr/include/io_lib/cram_structs.h -rw-r--r-- root/root 4951 2020-05-21 11:13 ./usr/include/io_lib/deflate_interlaced.h -rw-r--r-- root/root 9589 2020-05-21 11:13 ./usr/include/io_lib/dstring.h -rw-r--r-- root/root 2430 2020-05-21 11:13 ./usr/include/io_lib/error.h -rw-r--r-- root/root 10646 2020-05-21 11:13 ./usr/include/io_lib/expFileIO.h -rw-r--r-- root/root 2392 2020-05-21 11:13 ./usr/include/io_lib/fpoint.h -rw-r--r-- root/root 6952 2020-05-21 11:13 ./usr/include/io_lib/hash_table.h -rw-r--r-- root/root 6203 2020-05-21 11:13 ./usr/include/io_lib/io_lib_config.h -rw-r--r-- root/root 923 2020-05-21 11:13 ./usr/include/io_lib/jenkins_lookup3.h -rw-r--r-- root/root 2969 2020-05-21 11:13 ./usr/include/io_lib/mFILE.h -rw-r--r-- root/root 6459 2020-05-21 11:13 ./usr/include/io_lib/mach-io.h -rw-r--r-- root/root 1479 2020-05-21 11:13 ./usr/include/io_lib/md5.h -rw-r--r-- root/root 6841 2020-05-21 11:13 ./usr/include/io_lib/misc.h -rw-r--r-- root/root 5965 2020-05-21 11:13 ./usr/include/io_lib/open_trace_file.h -rw-r--r-- root/root 10487 2020-05-21 11:13 ./usr/include/io_lib/os.h -rw-r--r-- root/root 4216 2020-05-21 11:13 ./usr/include/io_lib/plain.h -rw-r--r-- root/root 2183 2020-05-21 11:13 ./usr/include/io_lib/pooled_alloc.h -rw-r--r-- root/root 13970 2020-05-21 11:13 ./usr/include/io_lib/sam_header.h -rw-r--r-- root/root 13901 2020-05-21 11:13 ./usr/include/io_lib/scf.h -rw-r--r-- root/root 4238 2020-05-21 11:13 ./usr/include/io_lib/scf_extras.h -rw-r--r-- root/root 8055 2020-05-21 11:13 ./usr/include/io_lib/scram.h -rw-r--r-- root/root 8453 2020-05-21 11:13 ./usr/include/io_lib/seqIOABI.h -rw-r--r-- root/root 3793 2020-05-21 11:13 ./usr/include/io_lib/sff.h -rw-r--r-- root/root 7141 2020-05-21 11:13 ./usr/include/io_lib/srf.h -rw-r--r-- root/root 3350 2020-05-21 11:13 ./usr/include/io_lib/stdio_hack.h -rw-r--r-- root/root 2423 2020-05-21 11:13 ./usr/include/io_lib/string_alloc.h -rw-r--r-- root/root 3253 2020-05-21 11:13 ./usr/include/io_lib/tar_format.h -rw-r--r-- root/root 6759 2020-05-21 11:13 ./usr/include/io_lib/thread_pool.h -rw-r--r-- root/root 5383 2020-05-21 11:13 ./usr/include/io_lib/traceType.h -rw-r--r-- root/root 7365 2020-05-21 11:13 ./usr/include/io_lib/translate.h -rw-r--r-- root/root 3578 2020-05-21 11:13 ./usr/include/io_lib/vlen.h -rw-r--r-- root/root 2562 2020-05-21 11:13 ./usr/include/io_lib/xalloc.h -rw-r--r-- root/root 2118 2020-05-21 11:13 ./usr/include/io_lib/zfio.h -rw-r--r-- root/root 8081 2020-05-21 11:13 ./usr/include/io_lib/ztr.h drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 1186400 2020-05-21 11:13 ./usr/lib/mips64el-linux-gnuabi64/libstaden-read.a lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/lib/mips64el-linux-gnuabi64/libstaden-read.so -> libstaden-read.so.14.0.0 drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/libstaden-read-dev/ -rw-r--r-- root/root 3595 2020-05-21 11:13 ./usr/share/doc/libstaden-read-dev/changelog.Debian.gz -rw-r--r-- root/root 28277 2020-01-31 17:22 ./usr/share/doc/libstaden-read-dev/changelog.gz -rw-r--r-- root/root 7242 2020-02-10 09:57 ./usr/share/doc/libstaden-read-dev/copyright drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/man/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/man/man3/ -rw-r--r-- root/root 2119 2020-05-21 11:13 ./usr/share/man/man3/ExperimentFile.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/exp2read.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/fread_reading.3.gz -> read_reading.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/fread_scf.3.gz -> read_scf.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/fwrite_reading.3.gz -> write_reading.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/fwrite_scf.3.gz -> write_scf.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/read2exp.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/read2scf.3.gz -> scf2read.3.gz -rw-r--r-- root/root 591 2020-05-21 11:13 ./usr/share/man/man3/read_allocate.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/read_deallocate.3.gz -> read_allocate.3.gz -rw-r--r-- root/root 1550 2020-05-21 11:13 ./usr/share/man/man3/read_reading.3.gz -rw-r--r-- root/root 610 2020-05-21 11:13 ./usr/share/man/man3/read_scf.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/read_scf_header.3.gz -> read_scf.3.gz -rw-r--r-- root/root 783 2020-05-21 11:13 ./usr/share/man/man3/scf2read.3.gz -rw-r--r-- root/root 804 2020-05-21 11:13 ./usr/share/man/man3/write_reading.3.gz -rw-r--r-- root/root 608 2020-05-21 11:13 ./usr/share/man/man3/write_scf.3.gz lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man3/write_scf_header.3.gz -> write_scf.3.gz drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/man/man4/ lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/man/man4/Read.4.gz -> ../man3/read_reading.3.gz libstaden-read14-dbgsym_1.14.12-2_mips64el.deb ---------------------------------------------- new Debian package, version 2.0. size 560988 bytes: control archive=564 bytes. 427 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libstaden-read14-dbgsym Source: staden-io-lib Version: 1.14.12-2 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 622 Depends: libstaden-read14 (= 1.14.12-2) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libstaden-read14 Build-Ids: 7041b00739cf8139738a5dbee543a2b0f47df379 drwxr-xr-x root/root 0 2020-05-21 11:13 ./ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/debug/.build-id/70/ -rw-r--r-- root/root 626008 2020-05-21 11:13 ./usr/lib/debug/.build-id/70/41b00739cf8139738a5dbee543a2b0f47df379.debug drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/doc/libstaden-read14-dbgsym -> libstaden-read14 libstaden-read14_1.14.12-2_mips64el.deb --------------------------------------- new Debian package, version 2.0. size 243708 bytes: control archive=4608 bytes. 955 bytes, 20 lines control 329 bytes, 4 lines md5sums 48 bytes, 1 lines shlibs 23252 bytes, 761 lines symbols 65 bytes, 2 lines triggers Package: libstaden-read14 Source: staden-io-lib Version: 1.14.12-2 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 700 Depends: libc6 (>= 2.29), libcurl3-gnutls (>= 7.16.2), libhtscodecs2 (>= 0.5), zlib1g (>= 1:1.2.0.2) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/jkbonfield/io_lib Description: Staden library for reading and writing DNA sequencing results This package contains the Staden io_lib, that is renamed in Debian and Fedora ‘staden-read’ instead of ‘read’. This library supports various DNA sequence read formats, in particular SCF, ABI, ALF, CTF, ZTR, SFF and SRF. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2020-05-21 11:13 ./ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/mips64el-linux-gnuabi64/ lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/lib/mips64el-linux-gnuabi64/libstaden-read.so.14 -> libstaden-read.so.14.0.0 -rw-r--r-- root/root 640824 2020-05-21 11:13 ./usr/lib/mips64el-linux-gnuabi64/libstaden-read.so.14.0.0 drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/libstaden-read14/ -rw-r--r-- root/root 3595 2020-05-21 11:13 ./usr/share/doc/libstaden-read14/changelog.Debian.gz -rw-r--r-- root/root 28277 2020-01-31 17:22 ./usr/share/doc/libstaden-read14/changelog.gz -rw-r--r-- root/root 7242 2020-02-10 09:57 ./usr/share/doc/libstaden-read14/copyright staden-io-lib-utils-dbgsym_1.14.12-2_mips64el.deb ------------------------------------------------- new Debian package, version 2.0. size 278852 bytes: control archive=2244 bytes. 1854 bytes, 12 lines control 3919 bytes, 37 lines md5sums Package: staden-io-lib-utils-dbgsym Source: staden-io-lib Version: 1.14.12-2 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 606 Depends: staden-io-lib-utils (= 1.14.12-2) Section: debug Priority: optional Description: debug symbols for staden-io-lib-utils Build-Ids: 015f06e04f9ed9749bab4aa11c4b413aef3f5050 0e52fdfe37d22fd01bde6b34226dcd91534e9a1a 10e0fb246c7153685afc8af30ac7430af04a169d 237fd3bf30ff2288a573cc8d79b8a2f18018e939 29cfddfcde7061e07b0b825d1bb77ace40632e69 2b154dd8e75a42e06d741ed3de24d2a311eebcc7 2b6f02db33a8e1e9eaae0072e359ddd1e2bd57d6 3780f442761fb62959a69d871fc2d811ed4cb80f 42f720a8ca0e4a0a569889f64cb821cbf18029f5 46bbee7fc78e8f7a48465b5e1c3ffd0f4e7b3806 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./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/ -rw-r--r-- root/root 20024 2020-05-21 11:13 ./usr/lib/debug/.dwz/mips64el-linux-gnuabi64/staden-io-lib-utils.debug drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-05-21 11:13 ./usr/share/doc/staden-io-lib-utils-dbgsym -> staden-io-lib-utils staden-io-lib-utils_1.14.12-2_mips64el.deb ------------------------------------------ new Debian package, version 2.0. size 170620 bytes: control archive=2212 bytes. 952 bytes, 21 lines control 3197 bytes, 53 lines md5sums Package: staden-io-lib-utils Source: staden-io-lib Version: 1.14.12-2 Architecture: mips64el Maintainer: Debian Med Packaging Team Installed-Size: 674 Depends: libc6 (>= 2.29), libstaden-read14 (>= 1.14.12) Suggests: staden-io-lib-examples Section: science Priority: optional Homepage: https://github.com/jkbonfield/io_lib Description: programs for manipulating DNA sequencing files The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. . This package contains the programs that are distributed with the Staden io_lib for manipulating and converting sequencing data files, and in particular files to manipulate short reads generated by second and third generation sequencers and stored in SRF format. drwxr-xr-x root/root 0 2020-05-21 11:13 ./ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/bin/ -rwxr-xr-x root/root 11104 2020-05-21 11:13 ./usr/bin/append_sff -rwxr-xr-x root/root 24296 2020-05-21 11:13 ./usr/bin/convert_trace -rwxr-xr-x root/root 27984 2020-05-21 11:13 ./usr/bin/cram_dump -rwxr-xr-x root/root 24048 2020-05-21 11:13 ./usr/bin/cram_filter -rwxr-xr-x root/root 11024 2020-05-21 11:13 ./usr/bin/cram_index -rwxr-xr-x root/root 15416 2020-05-21 11:13 ./usr/bin/cram_size -rwxr-xr-x root/root 15296 2020-05-21 11:13 ./usr/bin/extract_fastq -rwxr-xr-x root/root 15344 2020-05-21 11:13 ./usr/bin/extract_qual -rwxr-xr-x root/root 11232 2020-05-21 11:13 ./usr/bin/extract_seq -rwxr-xr-x root/root 11104 2020-05-21 11:13 ./usr/bin/get_comment -rwxr-xr-x root/root 11144 2020-05-21 11:13 ./usr/bin/hash_exp -rwxr-xr-x root/root 11136 2020-05-21 11:13 ./usr/bin/hash_extract -rwxr-xr-x root/root 11072 2020-05-21 11:13 ./usr/bin/hash_list -rwxr-xr-x root/root 15344 2020-05-21 11:13 ./usr/bin/hash_sff -rwxr-xr-x root/root 15632 2020-05-21 11:13 ./usr/bin/hash_tar -rwxr-xr-x root/root 11112 2020-05-21 11:13 ./usr/bin/index_tar -rwxr-xr-x root/root 19672 2020-05-21 11:13 ./usr/bin/makeSCF -rwxr-xr-x root/root 11016 2020-05-21 11:13 ./usr/bin/scf_dump -rwxr-xr-x root/root 11008 2020-05-21 11:13 ./usr/bin/scf_info -rwxr-xr-x root/root 11040 2020-05-21 11:13 ./usr/bin/scf_update -rwxr-xr-x root/root 15328 2020-05-21 11:13 ./usr/bin/scram_flagstat -rwxr-xr-x root/root 19496 2020-05-21 11:13 ./usr/bin/scram_merge -rwxr-xr-x root/root 19544 2020-05-21 11:13 ./usr/bin/scram_pileup -rwxr-xr-x root/root 15328 2020-05-21 11:13 ./usr/bin/scram_test -rwxr-xr-x root/root 23696 2020-05-21 11:13 ./usr/bin/scramble -rwxr-xr-x root/root 11168 2020-05-21 11:13 ./usr/bin/srf2fasta -rwxr-xr-x root/root 19656 2020-05-21 11:13 ./usr/bin/srf2fastq -rwxr-xr-x root/root 32656 2020-05-21 11:13 ./usr/bin/srf_dump_all -rwxr-xr-x root/root 11272 2020-05-21 11:13 ./usr/bin/srf_extract_hash -rwxr-xr-x root/root 11192 2020-05-21 11:13 ./usr/bin/srf_extract_linear -rwxr-xr-x root/root 32456 2020-05-21 11:13 ./usr/bin/srf_filter -rwxr-xr-x root/root 11208 2020-05-21 11:13 ./usr/bin/srf_index_hash -rwxr-xr-x root/root 23984 2020-05-21 11:13 ./usr/bin/srf_info -rwxr-xr-x root/root 11184 2020-05-21 11:13 ./usr/bin/srf_list -rwxr-xr-x root/root 11024 2020-05-21 11:13 ./usr/bin/trace_dump -rwxr-xr-x root/root 15368 2020-05-21 11:13 ./usr/bin/ztr_dump drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc-base/ -rw-r--r-- root/root 304 2020-02-10 09:50 ./usr/share/doc-base/staden-io-lib-hash-file-format -rw-r--r-- root/root 349 2020-02-10 09:50 ./usr/share/doc-base/staden-io-lib-ztr-format drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/doc/staden-io-lib-utils/ -rw-r--r-- root/root 3266 2020-01-31 17:22 ./usr/share/doc/staden-io-lib-utils/Hash_File_Format -rw-r--r-- root/root 5870 2020-01-31 17:22 ./usr/share/doc/staden-io-lib-utils/README.md.gz -rw-r--r-- root/root 20980 2020-01-31 17:22 ./usr/share/doc/staden-io-lib-utils/ZTR_format.gz -rw-r--r-- root/root 3595 2020-05-21 11:13 ./usr/share/doc/staden-io-lib-utils/changelog.Debian.gz -rw-r--r-- root/root 28277 2020-01-31 17:22 ./usr/share/doc/staden-io-lib-utils/changelog.gz -rw-r--r-- root/root 7242 2020-02-10 09:57 ./usr/share/doc/staden-io-lib-utils/copyright drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/man/ drwxr-xr-x root/root 0 2020-05-21 11:13 ./usr/share/man/man1/ -rw-r--r-- root/root 380 2020-05-21 11:13 ./usr/share/man/man1/append_sff.1.gz -rw-r--r-- root/root 2519 2020-05-21 11:13 ./usr/share/man/man1/scramble.1.gz -rw-r--r-- root/root 358 2020-05-21 11:13 ./usr/share/man/man1/srf2fasta.1.gz -rw-r--r-- root/root 1321 2020-05-21 11:13 ./usr/share/man/man1/srf2fastq.1.gz -rw-r--r-- root/root 836 2020-05-21 11:13 ./usr/share/man/man1/srf_dump_all.1.gz -rw-r--r-- root/root 859 2020-05-21 11:13 ./usr/share/man/man1/srf_filter.1.gz -rw-r--r-- root/root 572 2020-05-21 11:13 ./usr/share/man/man1/srf_index_hash.1.gz -rw-r--r-- root/root 748 2020-05-21 11:13 ./usr/share/man/man1/srf_info.1.gz -rw-r--r-- root/root 804 2020-05-21 11:13 ./usr/share/man/man1/srf_list.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [574 B] Get:5 copy:/<>/apt_archive ./ Packages [654 B] Fetched 2191 B in 0s (83.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdynaloader-functions-perl libemail-address-xs-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian patchutils readline-common t1utils Suggested packages: libxml-parser-perl libdata-dump-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libdevel-stacktrace-perl libwww-perl binutils-multiarch libtext-template-perl readline-doc Recommended packages: gnupg libhttp-message-perl libasync-mergepoint-perl libsereal-perl libtest-fatal-perl libtest-refcount-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl libperlio-gzip-perl The following NEW packages will be installed: diffstat gpg gpgconf libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libcpanel-json-xs-perl libdata-validate-domain-perl libdevel-callchecker-perl libdevel-size-perl libdynaloader-functions-perl libemail-address-xs-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libfuture-perl libhtml-parser-perl libhtml-tagset-perl libimport-into-perl libio-async-loop-epoll-perl libio-async-perl libipc-system-simple-perl libjson-maybexs-perl liblinux-epoll-perl liblist-compare-perl liblist-moreutils-perl liblist-utilsby-perl libmetrics-any-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libnamespace-clean-perl libnet-domain-tld-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libpath-tiny-perl libreadline8 librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsqlite3-0 libstrictures-perl libstruct-dumb-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-name-perl libsub-quote-perl libtest-metrics-any-perl libtext-glob-perl libtext-levenshtein-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxml-writer-perl libyaml-0-2 libyaml-libyaml-perl lintian patchutils readline-common sbuild-build-depends-lintian-dummy:mips64el t1utils 0 upgraded, 73 newly installed, 0 to remove and 0 not upgraded. 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(Reading database ... 20654 files and directories currently installed.) Preparing to unpack .../00-readline-common_8.0-4_all.deb ... Unpacking readline-common (8.0-4) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../01-libreadline8_8.0-4_amd64.deb ... Unpacking libreadline8:amd64 (8.0-4) ... Selecting previously unselected package diffstat. Preparing to unpack .../02-diffstat_1.63-1_amd64.deb ... Unpacking diffstat (1.63-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../03-libassuan0_2.5.3-7.1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.3-7.1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../04-gpgconf_2.2.20-1_amd64.deb ... Unpacking gpgconf (2.2.20-1) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../05-libsqlite3-0_3.32.3-1_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.32.3-1) ... Selecting previously unselected package gpg. 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Setting up librole-tiny-perl (2.001004-1) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libclass-xsaccessor-perl (1.19-3+b5) ... Setting up libexporter-tiny-perl (1.002002-1) ... Setting up libfont-ttf-perl (1.06-1) ... Setting up readline-common (8.0-4) ... Setting up libsereal-decoder-perl (4.014+ds-1) ... Setting up liburi-perl (1.76-2) ... Setting up libemail-address-xs-perl (1.04-1+b2) ... Setting up libfile-basedir-perl (0.08-1) ... Setting up liblist-moreutils-perl (0.416-1+b5) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libtype-tiny-perl (1.010002-1) ... Setting up libdevel-callchecker-perl (0.008-1+b1) ... Setting up libtest-metrics-any-perl (0.01-2) ... Setting up libio-async-perl (0.77-3) ... Setting up libhtml-parser-perl (3.72-5) ... Setting up gpgconf (2.2.20-1) ... Setting up gpg (2.2.20-1) ... Setting up libparams-classify-perl (0.015-1+b2) ... Setting up libio-async-loop-epoll-perl (0.21-1) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libmodule-implementation-perl (0.09-1) ... Setting up libpackage-stash-perl (0.38-1) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004000-1) ... Setting up libmoox-aliases-perl (0.001006-1) ... Setting up libb-hooks-endofscope-perl (0.24-1) ... Setting up libnamespace-clean-perl (0.27-1) ... Setting up lintian (2.82.0) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for man-db (2.9.3-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for libc-bin (2.30-8) ... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 46344 Build-Time: 96 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 20 Job: staden-io-lib_1.14.12-2 Lintian: pass Machine Architecture: amd64 Package: staden-io-lib Package-Time: 126 Source-Version: 1.14.12-2 Space: 46344 Status: successful Version: 1.14.12-2 -------------------------------------------------------------------------------- Finished at 2020-07-04T22:03:32Z Build needed 00:02:06, 46344k disk space