sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | staden-io-lib 1.14.14+dfsg-2 (arm64) Sat, 29 Oct 2022 23:55:18 +0000 | +==============================================================================+ Package: staden-io-lib Version: 1.14.14+dfsg-2 Source Version: 1.14.14+dfsg-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-0350f432-ca3e-4d55-88d3-19b6a49b1e8f' with '<>' I: NOTICE: Log filtering will replace 'build/staden-io-lib-4r2ejU/resolver-Y6rD8k' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Hit:1 http://localhost:3142/debian sid InRelease Get:2 http://localhost:3142/debian sid/main arm64 Packages [9238 kB] Fetched 9238 kB in 1s (7524 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'staden-io-lib' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/staden-io-lib.git Please use: git clone https://salsa.debian.org/med-team/staden-io-lib.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 5538 kB of source archives. Get:1 http://localhost:3142/debian sid/main staden-io-lib 1.14.14+dfsg-2 (dsc) [2554 B] Get:2 http://localhost:3142/debian sid/main staden-io-lib 1.14.14+dfsg-2 (tar) [5518 kB] Get:3 http://localhost:3142/debian sid/main staden-io-lib 1.14.14+dfsg-2 (diff) [17.3 kB] Fetched 5538 kB in 0s (170 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/staden-io-lib-4r2ejU/staden-io-lib-1.14.14+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/staden-io-lib-4r2ejU' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libcurl4-gnutls-dev | libcurl4-nss-dev, libhtscodecs-dev, d-shlibs, libbz2-dev, liblzma-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libcurl4-gnutls-dev, libhtscodecs-dev, d-shlibs, libbz2-dev, liblzma-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [449 B] Get:5 copy:/<>/apt_archive ./ Packages [530 B] Fetched 1936 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cpp-12-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-11-base:arm64 gcc-12-aarch64-linux-gnu gcc-12-aarch64-linux-gnu-base gcc-12-base:arm64 gcc-12-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbrotli1:arm64 libbz2-1.0:arm64 libbz2-dev:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libcurl3-gnutls:arm64 libcurl4-gnutls-dev:arm64 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libffi8:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:arm64 libgcc-12-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhogweed6:arm64 libhtscodecs-dev:arm64 libhtscodecs2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu71 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 libldap-2.5-0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libnettle8:arm64 libnghttp2-14:arm64 libnsl-dev:arm64 libnsl2:arm64 libp11-kit0:arm64 libpipeline1 libpsl5:arm64 librtmp1:arm64 libsasl2-2:arm64 libsasl2-modules-db:arm64 libssh2-1:arm64 libssl3:arm64 libstdc++-11-dev:arm64 libstdc++-12-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtasn1-6:arm64 libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:arm64 linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch gcc-12-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 libnss-nis:arm64 libnss-nisplus:arm64 manpages-dev:arm64 libcurl4-doc:arm64 libgnutls28-dev:arm64 libidn11-dev:arm64 libkrb5-dev:arm64 libldap2-dev:arm64 librtmp-dev:arm64 libssh2-1-dev:arm64 pkg-config:arm64 gnutls-bin:arm64 krb5-doc:arm64 krb5-user:arm64 liblzma-doc:arm64 libstdc++-11-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:arm64 ca-certificates:arm64 libarchive-cpio-perl krb5-locales:arm64 libldap-common:arm64 publicsuffix:arm64 libsasl2-modules:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cpp-12-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 d-shlibs debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-11-base:arm64 gcc-12-aarch64-linux-gnu gcc-12-aarch64-linux-gnu-base gcc-12-base:arm64 gcc-12-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libbrotli1:arm64 libbz2-1.0:arm64 libbz2-dev:arm64 libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libcurl3-gnutls:arm64 libcurl4-gnutls-dev:arm64 libdb5.3:arm64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libffi8:arm64 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:arm64 libgcc-12-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgmp10:arm64 libgnutls30:arm64 libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhogweed6:arm64 libhtscodecs-dev:arm64 libhtscodecs2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu71 libidn2-0:arm64 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 libldap-2.5-0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross liblzma-dev:arm64 liblzma5:arm64 libmagic-mgc libmagic1 libnettle8:arm64 libnghttp2-14:arm64 libnsl-dev:arm64 libnsl2:arm64 libp11-kit0:arm64 libpipeline1 libpsl5:arm64 librtmp1:arm64 libsasl2-2:arm64 libsasl2-modules-db:arm64 libssh2-1:arm64 libssl3:arm64 libstdc++-11-dev:arm64 libstdc++-12-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtasn1-6:arm64 libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libunistring2:arm64 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:arm64 linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 132 newly installed, 0 to remove and 0 not upgraded. Need to get 104 MB of archives. After this operation, 417 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [960 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-4+b3 [15.1 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.41-4 [295 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.41-4 [129 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.41-4 [67.0 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-9 [175 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.22.4-8 [936 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.38.1-1.1+b1 [85.9 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.6-3 [39.4 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.11.0-1+b1 [1342 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043 [74.0 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-1 [291 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-2 [343 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-9 [510 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-aarch64-linux-gnu amd64 2.39-8 [3342 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-12-aarch64-linux-gnu-base amd64 12.2.0-3cross2 [208 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-12-aarch64-linux-gnu amd64 12.2.0-3cross2 [9154 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-aarch64-linux-gnu amd64 4:12.2.0-1 [17.1 kB] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-12-cross-base all 12.2.0-3cross2 [204 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-arm64-cross all 2.35-1cross1 [1216 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-arm64-cross all 12.2.0-3cross2 [35.1 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-arm64-cross all 12.2.0-3cross2 [102 kB] Get:28 http://localhost:3142/debian sid/main amd64 libitm1-arm64-cross all 12.2.0-3cross2 [23.5 kB] Get:29 http://localhost:3142/debian sid/main amd64 libatomic1-arm64-cross all 12.2.0-3cross2 [9304 B] Get:30 http://localhost:3142/debian sid/main amd64 libasan8-arm64-cross all 12.2.0-3cross2 [2096 kB] Get:31 http://localhost:3142/debian sid/main amd64 liblsan0-arm64-cross all 12.2.0-3cross2 [926 kB] Get:32 http://localhost:3142/debian sid/main amd64 libtsan2-arm64-cross all 12.2.0-3cross2 [2179 kB] Get:33 http://localhost:3142/debian sid/main amd64 libstdc++6-arm64-cross all 12.2.0-3cross2 [514 kB] Get:34 http://localhost:3142/debian sid/main amd64 libubsan1-arm64-cross all 12.2.0-3cross2 [860 kB] Get:35 http://localhost:3142/debian sid/main amd64 libhwasan0-arm64-cross all 12.2.0-3cross2 [998 kB] Get:36 http://localhost:3142/debian sid/main amd64 libgcc-12-dev-arm64-cross all 12.2.0-3cross2 [955 kB] Get:37 http://localhost:3142/debian sid/main amd64 gcc-12-aarch64-linux-gnu amd64 12.2.0-3cross2 [18.0 MB] Get:38 http://localhost:3142/debian sid/main amd64 gcc-aarch64-linux-gnu amd64 4:12.2.0-1 [1452 B] Get:39 http://localhost:3142/debian sid/main amd64 linux-libc-dev-arm64-cross all 5.19.6-1cross1 [1733 kB] Get:40 http://localhost:3142/debian sid/main amd64 libc6-dev-arm64-cross all 2.35-1cross1 [1621 kB] Get:41 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-arm64-cross all 12.2.0-3cross2 [1974 kB] Get:42 http://localhost:3142/debian sid/main amd64 g++-12-aarch64-linux-gnu amd64 12.2.0-3cross2 [10.1 MB] Get:43 http://localhost:3142/debian sid/main amd64 g++-aarch64-linux-gnu amd64 4:12.2.0-1 [1176 B] Get:44 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:45 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:46 http://localhost:3142/debian sid/main amd64 libicu71 amd64 71.1-3 [9218 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1+b1 [708 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:49 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:50 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:51 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:52 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:53 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:54 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:56 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:58 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:59 http://localhost:3142/debian sid/main amd64 crossbuild-essential-arm64 all 12.9 [6708 B] Get:60 http://localhost:3142/debian sid/main amd64 d-shlibs all 0.104 [18.6 kB] Get:61 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.10.1 [79.9 kB] Get:62 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-4 [526 kB] Get:63 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:64 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:65 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:66 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.0-1 [26.6 kB] Get:67 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.0-1 [15.8 kB] Get:68 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.187-4 [179 kB] Get:69 http://localhost:3142/debian sid/main amd64 dwz amd64 0.14+20220924-2 [109 kB] Get:70 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-9 [1315 kB] Get:71 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:72 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:73 http://localhost:3142/debian sid/main amd64 debhelper all 13.10.1 [940 kB] Get:74 http://localhost:3142/debian sid/main arm64 gcc-11-base arm64 11.3.0-8 [209 kB] Get:75 http://localhost:3142/debian sid/main arm64 gcc-12-base arm64 12.2.0-7 [36.6 kB] Get:76 http://localhost:3142/debian sid/main arm64 libgcc-s1 arm64 12.2.0-7 [34.8 kB] Get:77 http://localhost:3142/debian sid/main arm64 libc6 arm64 2.35-4 [2316 kB] Get:78 http://localhost:3142/debian sid/main arm64 libasan6 arm64 11.3.0-8 [1952 kB] Get:79 http://localhost:3142/debian sid/main arm64 libatomic1 arm64 12.2.0-7 [9536 B] Get:80 http://localhost:3142/debian sid/main arm64 libbrotli1 arm64 1.0.9-2+b4 [270 kB] Get:81 http://localhost:3142/debian sid/main arm64 libbz2-1.0 arm64 1.0.8-5+b1 [47.5 kB] Get:82 http://localhost:3142/debian sid/main arm64 linux-libc-dev arm64 6.0.5-1 [1647 kB] Get:83 http://localhost:3142/debian sid/main arm64 libcrypt1 arm64 1:4.4.28-2 [90.8 kB] Get:84 http://localhost:3142/debian sid/main arm64 libcrypt-dev arm64 1:4.4.28-2 [122 kB] Get:85 http://localhost:3142/debian sid/main arm64 libcom-err2 arm64 1.46.6~rc1-1+b1 [14.7 kB] Get:86 http://localhost:3142/debian sid/main arm64 libkrb5support0 arm64 1.20-1+b1 [31.4 kB] Get:87 http://localhost:3142/debian sid/main arm64 libk5crypto3 arm64 1.20-1+b1 [78.7 kB] Get:88 http://localhost:3142/debian sid/main arm64 libkeyutils1 arm64 1.6.3-1 [15.7 kB] Get:89 http://localhost:3142/debian sid/main arm64 libssl3 arm64 3.0.5-4 [1816 kB] Get:90 http://localhost:3142/debian sid/main arm64 libkrb5-3 arm64 1.20-1+b1 [312 kB] Get:91 http://localhost:3142/debian sid/main arm64 libgssapi-krb5-2 arm64 1.20-1+b1 [123 kB] Get:92 http://localhost:3142/debian sid/main arm64 libtirpc3 arm64 1.3.3+ds-1 [80.9 kB] Get:93 http://localhost:3142/debian sid/main arm64 libnsl2 arm64 1.3.0-2 [36.9 kB] Get:94 http://localhost:3142/debian sid/main arm64 libtirpc-dev arm64 1.3.3+ds-1 [194 kB] Get:95 http://localhost:3142/debian sid/main arm64 libnsl-dev arm64 1.3.0-2 [66.1 kB] Get:96 http://localhost:3142/debian sid/main arm64 libc6-dev arm64 2.35-4 [1419 kB] Get:97 http://localhost:3142/debian sid/main arm64 libbz2-dev arm64 1.0.8-5+b1 [31.5 kB] Get:98 http://localhost:3142/debian sid/main arm64 libgmp10 arm64 2:6.2.1+dfsg1-1.1 [538 kB] Get:99 http://localhost:3142/debian sid/main arm64 libnettle8 arm64 3.8.1-2 [294 kB] Get:100 http://localhost:3142/debian sid/main arm64 libhogweed6 arm64 3.8.1-2 [324 kB] Get:101 http://localhost:3142/debian sid/main arm64 libunistring2 arm64 1.0-2 [423 kB] Get:102 http://localhost:3142/debian sid/main arm64 libidn2-0 arm64 2.3.3-1+b1 [122 kB] Get:103 http://localhost:3142/debian sid/main arm64 libffi8 arm64 3.4.4-1 [20.5 kB] Get:104 http://localhost:3142/debian sid/main arm64 libp11-kit0 arm64 0.24.1-1 [335 kB] Get:105 http://localhost:3142/debian sid/main arm64 libtasn1-6 arm64 4.19.0-2 [54.2 kB] Get:106 http://localhost:3142/debian sid/main arm64 libgnutls30 arm64 3.7.8-2 [1326 kB] Get:107 http://localhost:3142/debian sid/main arm64 libdb5.3 arm64 5.3.28+dfsg1-0.10 [623 kB] Get:108 http://localhost:3142/debian sid/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-8 [39.2 kB] Get:109 http://localhost:3142/debian sid/main arm64 libsasl2-2 arm64 2.1.28+dfsg-8 [76.5 kB] Get:110 http://localhost:3142/debian sid/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-2+b1 [171 kB] Get:111 http://localhost:3142/debian sid/main arm64 libnghttp2-14 arm64 1.50.0-1+b1 [69.5 kB] Get:112 http://localhost:3142/debian sid/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get:113 http://localhost:3142/debian sid/main arm64 zlib1g arm64 1:1.2.11.dfsg-4.1 [89.0 kB] Get:114 http://localhost:3142/debian sid/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get:115 http://localhost:3142/debian sid/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get:116 http://localhost:3142/debian sid/main arm64 libzstd1 arm64 1.5.2+dfsg-1 [241 kB] Get:117 http://localhost:3142/debian sid/main arm64 libcurl3-gnutls arm64 7.86.0-1 [333 kB] Get:118 http://localhost:3142/debian sid/main arm64 libcurl4-gnutls-dev arm64 7.86.0-1 [439 kB] Get:119 http://localhost:3142/debian sid/main arm64 libgomp1 arm64 12.2.0-7 [104 kB] Get:120 http://localhost:3142/debian sid/main arm64 libitm1 arm64 12.2.0-7 [23.9 kB] Get:121 http://localhost:3142/debian sid/main arm64 liblsan0 arm64 12.2.0-7 [926 kB] Get:122 http://localhost:3142/debian sid/main arm64 libtsan0 arm64 11.3.0-8 [1958 kB] Get:123 http://localhost:3142/debian sid/main arm64 libstdc++6 arm64 12.2.0-7 [556 kB] Get:124 http://localhost:3142/debian sid/main arm64 libubsan1 arm64 12.2.0-7 [862 kB] Get:125 http://localhost:3142/debian sid/main arm64 libhwasan0 arm64 12.2.0-7 [998 kB] Get:126 http://localhost:3142/debian sid/main arm64 libgcc-11-dev arm64 11.3.0-8 [933 kB] Get:127 http://localhost:3142/debian sid/main arm64 libhtscodecs2 arm64 1.3.0-4 [70.5 kB] Get:128 http://localhost:3142/debian sid/main arm64 libhtscodecs-dev arm64 1.3.0-4 [2850 kB] Get:129 http://localhost:3142/debian sid/main arm64 liblzma5 arm64 5.2.7-0.1 [177 kB] Get:130 http://localhost:3142/debian sid/main arm64 liblzma-dev arm64 5.2.7-0.1 [236 kB] Get:131 http://localhost:3142/debian sid/main arm64 libstdc++-11-dev arm64 11.3.0-8 [1927 kB] Get:132 http://localhost:3142/debian sid/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-4.1 [189 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 104 MB in 1s (197 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15687 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-4+b3_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.17_all.deb ... Unpacking sensible-utils (0.0.17) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.41-4_amd64.deb ... Unpacking libmagic-mgc (1:5.41-4) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.41-4_amd64.deb ... Unpacking libmagic1:amd64 (1:5.41-4) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.41-4_amd64.deb ... Unpacking file (1:5.41-4) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-9_amd64.deb ... Unpacking gettext-base (0.21-9) ... 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Unpacking libstdc++-11-dev:arm64 (11.3.0-8) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../130-zlib1g-dev_1%3a1.2.11.dfsg-4.1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.2.11.dfsg-4.1) ... Selecting previously unselected package sbuild-build-depends-main-dummy:arm64. Preparing to unpack .../131-sbuild-build-depends-main-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Setting up libconfig-inifiles-perl (3.000003-1) ... Setting up libpipeline1:amd64 (1.5.6-3) ... Setting up libicu71:amd64 (71.1-3) ... Setting up gcc-11-base:arm64 (11.3.0-8) ... Setting up libfile-which-perl (1.27-2) ... Setting up gcc-12-cross-base (12.2.0-3cross2) ... Setting up bsdextrautils (2.38.1-1.1+b1) ... Setting up libmagic-mgc (1:5.41-4) ... Setting up gcc-12-aarch64-linux-gnu-base:amd64 (12.2.0-3cross2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.10.1) ... Setting up libmagic1:amd64 (1:5.41-4) ... Setting up linux-libc-dev:arm64 (6.0.5-1) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-9) ... Setting up m4 (1.4.19-1) ... Setting up binutils-aarch64-linux-gnu (2.39-8) ... Setting up file (1:5.41-4) ... Setting up libyaml-perl (1.30-2) ... Setting up gcc-12-base:arm64 (12.2.0-7) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libc6-arm64-cross (2.35-1cross1) ... Setting up autopoint (0.21-9) ... Setting up d-shlibs (0.104) ... Setting up libitm1-arm64-cross (12.2.0-3cross2) ... Setting up autoconf (2.71-2) ... Setting up linux-libc-dev-arm64-cross (5.19.6-1cross1) ... Setting up sensible-utils (0.0.17) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libelf1:amd64 (0.187-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1+b1) ... Setting up liblocale-gettext-perl (1.07-4+b3) ... Setting up libgcc-s1-arm64-cross (12.2.0-3cross2) ... Setting up libatomic1-arm64-cross (12.2.0-3cross2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.0-1) ... Setting up liblsan0-arm64-cross (12.2.0-3cross2) ... Setting up libgomp1-arm64-cross (12.2.0-3cross2) ... Setting up gettext (0.21-9) ... Setting up cpp-12-aarch64-linux-gnu (12.2.0-3cross2) ... Setting up libtool (2.4.7-4) ... Setting up libhwasan0-arm64-cross (12.2.0-3cross2) ... Setting up libc6-dev-arm64-cross (2.35-1cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libstdc++6-arm64-cross (12.2.0-3cross2) ... Setting up dh-autoreconf (20) ... Setting up cpp-aarch64-linux-gnu (4:12.2.0-1) ... Setting up ucf (3.0043) ... Setting up dh-strip-nondeterminism (1.13.0-1) ... Setting up dwz (0.14+20220924-2) ... Setting up groff-base (1.22.4-8) ... Setting up libasan8-arm64-cross (12.2.0-3cross2) ... Setting up libtsan2-arm64-cross (12.2.0-3cross2) ... Setting up libubsan1-arm64-cross (12.2.0-3cross2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.0-1+b1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-12-dev-arm64-cross (12.2.0-3cross2) ... Setting up gcc-12-aarch64-linux-gnu (12.2.0-3cross2) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-aarch64-linux-gnu (4:12.2.0-1) ... Setting up debhelper (13.10.1) ... Setting up libstdc++-12-dev-arm64-cross (12.2.0-3cross2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up g++-12-aarch64-linux-gnu (12.2.0-3cross2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-aarch64-linux-gnu (4:12.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-arm64 (12.9) ... Setting up libgcc-s1:arm64 (12.2.0-7) ... Setting up libc6:arm64 (2.35-4) ... Setting up libffi8:arm64 (3.4.4-1) ... Setting up libhwasan0:arm64 (12.2.0-7) ... Setting up libtasn1-6:arm64 (4.19.0-2) ... Setting up libbz2-1.0:arm64 (1.0.8-5+b1) ... Setting up libdb5.3:arm64 (5.3.28+dfsg1-0.10) ... Setting up libstdc++6:arm64 (12.2.0-7) ... Setting up liblsan0:arm64 (12.2.0-7) ... Setting up libitm1:arm64 (12.2.0-7) ... Setting up libtsan0:arm64 (11.3.0-8) ... Setting up libhtscodecs2:arm64 (1.3.0-4) ... Setting up libzstd1:arm64 (1.5.2+dfsg-1) ... Setting up libkeyutils1:arm64 (1.6.3-1) ... Setting up liblzma5:arm64 (5.2.7-0.1) ... Setting up libbrotli1:arm64 (1.0.9-2+b4) ... Setting up libssl3:arm64 (3.0.5-4) ... Setting up libnghttp2-14:arm64 (1.50.0-1+b1) ... Setting up libunistring2:arm64 (1.0-2) ... Setting up zlib1g:arm64 (1:1.2.11.dfsg-4.1) ... Setting up libcrypt1:arm64 (1:4.4.28-2) ... Setting up libidn2-0:arm64 (2.3.3-1+b1) ... Setting up libcom-err2:arm64 (1.46.6~rc1-1+b1) ... Setting up libgomp1:arm64 (12.2.0-7) ... Setting up libasan6:arm64 (11.3.0-8) ... Setting up libkrb5support0:arm64 (1.20-1+b1) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg-8) ... Setting up libhtscodecs-dev:arm64 (1.3.0-4) ... Setting up libnettle8:arm64 (3.8.1-2) ... Setting up libgmp10:arm64 (2:6.2.1+dfsg1-1.1) ... Setting up libp11-kit0:arm64 (0.24.1-1) ... Setting up libatomic1:arm64 (12.2.0-7) ... Setting up libk5crypto3:arm64 (1.20-1+b1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg-8) ... Setting up liblzma-dev:arm64 (5.2.7-0.1) ... Setting up libubsan1:arm64 (12.2.0-7) ... Setting up libgcc-11-dev:arm64 (11.3.0-8) ... Setting up libcrypt-dev:arm64 (1:4.4.28-2) ... Setting up libssh2-1:arm64 (1.10.0-3+b1) ... Setting up libkrb5-3:arm64 (1.20-1+b1) ... Setting up libpsl5:arm64 (0.21.0-1.2) ... Setting up libhogweed6:arm64 (3.8.1-2) ... Setting up libgnutls30:arm64 (3.7.8-2) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libgssapi-krb5-2:arm64 (1.20-1+b1) ... Setting up libtirpc3:arm64 (1.3.3+ds-1) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-2+b1) ... Setting up libtirpc-dev:arm64 (1.3.3+ds-1) ... Setting up libnsl2:arm64 (1.3.0-2) ... Setting up libcurl3-gnutls:arm64 (7.86.0-1) ... Setting up libcurl4-gnutls-dev:arm64 (7.86.0-1) ... Setting up libnsl-dev:arm64 (1.3.0-2) ... Setting up libc6-dev:arm64 (2.35-4) ... Setting up libbz2-dev:arm64 (1.0.8-5+b1) ... Setting up libstdc++-11-dev:arm64 (11.3.0-8) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-4.1) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.35-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-18-amd64 #1 SMP Debian 5.10.140-1 (2022-09-02) amd64 (x86_64) Toolchain package versions: binutils_2.39-8 dpkg-dev_1.21.9 g++-11_11.3.0-8 g++-12_12.2.0-7 gcc-11_11.3.0-8 gcc-12_12.2.0-7 libc6-dev_2.35-4 libstdc++-11-dev_11.3.0-8 libstdc++-12-dev_12.2.0-7 libstdc++-12-dev-arm64-cross_12.2.0-3cross2 libstdc++6_12.2.0-7 libstdc++6-arm64-cross_12.2.0-3cross2 linux-libc-dev_6.0.5-1 Package versions: adduser_3.129 apt_2.5.3+b1 autoconf_2.71-2 automake_1:1.16.5-1.3 autopoint_0.21-9 autotools-dev_20220109.1 base-files_12.3 base-passwd_3.6.1 bash_5.2-2 binutils_2.39-8 binutils-aarch64-linux-gnu_2.39-8 binutils-common_2.39-8 binutils-x86-64-linux-gnu_2.39-8 bsdextrautils_2.38.1-1.1+b1 bsdutils_1:2.38.1-1.1+b1 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-1 cpp-11_11.3.0-8 cpp-12_12.2.0-7 cpp-12-aarch64-linux-gnu_12.2.0-3cross2 cpp-aarch64-linux-gnu_4:12.2.0-1 cross-config_2.6.18+nmu2 crossbuild-essential-arm64_12.9 d-shlibs_0.104 dash_0.5.11+git20210903+057cd650a4ed-9 debconf_1.5.79 debhelper_13.10.1 debian-archive-keyring_2021.1.1 debianutils_5.7-0.3 dh-autoreconf_20 dh-strip-nondeterminism_1.13.0-1 diffutils_1:3.8-1 dpkg_1.21.9+b1 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.21.9 dwz_0.14+20220924-2 e2fsprogs_1.46.6~rc1-1+b1 fakeroot_1.29-1 file_1:5.41-4 findutils_4.9.0-3 g++_4:12.2.0-1 g++-11_11.3.0-8 g++-12_12.2.0-7 g++-12-aarch64-linux-gnu_12.2.0-3cross2 g++-aarch64-linux-gnu_4:12.2.0-1 gcc_4:12.2.0-1 gcc-11_11.3.0-8 gcc-11-base_11.3.0-8 gcc-12_12.2.0-7 gcc-12-aarch64-linux-gnu_12.2.0-3cross2 gcc-12-aarch64-linux-gnu-base_12.2.0-3cross2 gcc-12-base_12.2.0-7 gcc-12-cross-base_12.2.0-3cross2 gcc-9-base_9.5.0-2+b1 gcc-aarch64-linux-gnu_4:12.2.0-1 gettext_0.21-9 gettext-base_0.21-9 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-8 gzip_1.12-1 hostname_3.23 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-1 libapt-pkg6.0_2.5.3+b1 libarchive-zip-perl_1.68-1 libasan6_11.3.0-8 libasan8_12.2.0-7 libasan8-arm64-cross_12.2.0-3cross2 libatomic1_12.2.0-7 libatomic1-arm64-cross_12.2.0-3cross2 libattr1_1:2.5.1-1 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1+b1 libbinutils_2.39-8 libblkid1_2.38.1-1.1+b1 libbrotli1_1.0.9-2+b4 libbz2-1.0_1.0.8-5+b1 libbz2-dev_1.0.8-5+b1 libc-bin_2.35-4 libc-dev-bin_2.35-4 libc6_2.35-4 libc6-arm64-cross_2.35-1cross1 libc6-dev_2.35-4 libc6-dev-arm64-cross_2.35-1cross1 libcap-ng0_0.8.3-1+b1 libcap2_1:2.44-1 libcc1-0_12.2.0-7 libcom-err2_1.46.6~rc1-1+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.28-2 libcrypt1_1:4.4.28-2 libctf-nobfd0_2.39-8 libctf0_2.39-8 libcurl3-gnutls_7.86.0-1 libcurl4-gnutls-dev_7.86.0-1 libdb5.3_5.3.28+dfsg1-0.10 libdebconfclient0_0.264 libdebhelper-perl_13.10.1 libdebian-dpkgcross-perl_2.6.18+nmu2 libdpkg-perl_1.21.9 libelf1_0.187-4 libext2fs2_1.46.6~rc1-1+b1 libfakeroot_1.29-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-2 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.13.0-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.3.0-8 libgcc-12-dev_12.2.0-7 libgcc-12-dev-arm64-cross_12.2.0-3cross2 libgcc-s1_12.2.0-7 libgcc-s1-arm64-cross_12.2.0-3cross2 libgcrypt20_1.10.1-2 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.8-2 libgomp1_12.2.0-7 libgomp1-arm64-cross_12.2.0-3cross2 libgpg-error0_1.46-1 libgprofng0_2.39-8 libgssapi-krb5-2_1.20-1+b1 libhogweed6_3.8.1-2 libhtscodecs-dev_1.3.0-4 libhtscodecs2_1.3.0-4 libhwasan0_12.2.0-7 libhwasan0-arm64-cross_12.2.0-3cross2 libicu71_71.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-3.1 libisl23_0.25-1 libitm1_12.2.0-7 libitm1-arm64-cross_12.2.0-3cross2 libk5crypto3_1.20-1+b1 libkeyutils1_1.6.3-1 libkrb5-3_1.20-1+b1 libkrb5support0_1.20-1+b1 libldap-2.5-0_2.5.13+dfsg-2+b1 liblocale-gettext-perl_1.07-4+b3 liblsan0_12.2.0-7 liblsan0-arm64-cross_12.2.0-3cross2 liblz4-1_1.9.4-1 liblzma-dev_5.2.7-0.1 liblzma5_5.2.7-0.1 libmagic-mgc_1:5.41-4 libmagic1_1:5.41-4 libmount1_2.38.1-1.1+b1 libmpc3_1.2.1-2 libmpfr6_4.1.0-3 libnettle8_3.8.1-2 libnghttp2-14_1.50.0-1+b1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-1 libpam-modules_1.5.2-5 libpam-modules-bin_1.5.2-5 libpam-runtime_1.5.2-5 libpam0g_1.5.2-5 libpcre2-8-0_10.40-2 libpcre3_2:8.39-14 libperl5.34_5.34.0-5 libperl5.36_5.36.0-4 libpipeline1_1.5.6-3 libpsl5_0.21.0-1.2 libquadmath0_12.2.0-7 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.28+dfsg-8 libsasl2-modules-db_2.1.28+dfsg-8 libseccomp2_2.5.4-1+b1 libselinux1_3.4-1+b2 libsemanage-common_3.4-1 libsemanage2_3.4-1+b2 libsepol2_3.4-2 libsmartcols1_2.38.1-1.1+b1 libss2_1.46.6~rc1-1+b1 libssh2-1_1.10.0-3+b1 libssl3_3.0.5-4 libstdc++-11-dev_11.3.0-8 libstdc++-12-dev_12.2.0-7 libstdc++-12-dev-arm64-cross_12.2.0-3cross2 libstdc++6_12.2.0-7 libstdc++6-arm64-cross_12.2.0-3cross2 libsub-override-perl_0.09-4 libsystemd0_252~rc3-2 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.3+20220423-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-4 libtsan0_11.3.0-8 libtsan2_12.2.0-7 libtsan2-arm64-cross_12.2.0-3cross2 libubsan1_12.2.0-7 libubsan1-arm64-cross_12.2.0-3cross2 libuchardet0_0.0.7-1 libudev1_252~rc3-2 libunistring2_1.0-2 libuuid1_2.38.1-1.1+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.14+dfsg-1+b1 libxxhash0_0.8.1-1 libyaml-perl_1.30-2 libzstd1_1.5.2+dfsg-1 linux-libc-dev_6.0.5-1 linux-libc-dev-arm64-cross_5.19.6-1cross1 login_1:4.12.3+dfsg1-2 logsave_1.46.6~rc1-1+b1 m4_1.4.19-1 make_4.3-4.1 man-db_2.11.0-1+b1 mawk_1.3.4.20200120-3.1 mount_2.38.1-1.1+b1 ncurses-base_6.3+20220423-2 ncurses-bin_6.3+20220423-2 passwd_1:4.12.3+dfsg1-2 patch_2.7.6-7 perl_5.36.0-4 perl-base_5.36.0-4 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-4 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.05-6 tar_1.34+dfsg-1 tzdata_2022f-1 ucf_3.0043 usrmerge_33 util-linux_2.38.1-1.1+b1 util-linux-extra_2.38.1-1.1+b1 xz-utils_5.2.7-0.1 zlib1g_1:1.2.11.dfsg-4.1 zlib1g-dev_1:1.2.11.dfsg-4.1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: staden-io-lib Binary: staden-io-lib-utils, libstaden-read-dev, libstaden-read14, staden-io-lib-examples Architecture: any all Version: 1.14.14+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille , Thorsten Alteholz , Michael R. Crusoe Homepage: https://github.com/jkbonfield/io_lib Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/staden-io-lib Vcs-Git: https://salsa.debian.org/med-team/staden-io-lib.git Testsuite: autopkgtest Testsuite-Triggers: smalt-examples Build-Depends: debhelper-compat (= 13), zlib1g-dev, libcurl4-gnutls-dev | libcurl4-nss-dev, libhtscodecs-dev, d-shlibs, libbz2-dev, liblzma-dev Package-List: libstaden-read-dev deb libdevel optional arch=any libstaden-read14 deb libs optional arch=any staden-io-lib-examples deb science optional arch=all staden-io-lib-utils deb science optional arch=any Checksums-Sha1: 99f7d18d3411ab233856fa5a2ffe56e1c47d8ec2 5518392 staden-io-lib_1.14.14+dfsg.orig.tar.xz 297281bbbb349b19d886cba8843e6b05026e7ca6 17252 staden-io-lib_1.14.14+dfsg-2.debian.tar.xz Checksums-Sha256: 9af8b16561272337066d54ccc7e0982597a347d9d122cd13e7e6bbb94d8f413a 5518392 staden-io-lib_1.14.14+dfsg.orig.tar.xz df54347ebb9d7227d29c905bd220fd51e19bb81fd16f82b3fd6baa815ad24c44 17252 staden-io-lib_1.14.14+dfsg-2.debian.tar.xz Files: 7bdd4d2a9491a959ec719da29d473399 5518392 staden-io-lib_1.14.14+dfsg.orig.tar.xz e1faae21621ef3aee6f1aa73b3048f52 17252 staden-io-lib_1.14.14+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmNbZ8wRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGbqxAAl+o9ZIbyieD0/nqjHUN76dIxofC3EFy1 +HnYX41tIy43GECnVIMjbreN1toXjl6Lr5Tcx6s4a5cC/Jt2Fga+Zeej0Fi5jKev +mlOACnpA+BcmJvPz3DePuH8O1PH/bn7bq9IXtBJwDCK8fFWuh54hTV+rkldQcmT 0m15/IgEcqDQ4/MW17gjdj0+zReOWqyKamtftGZzesGNxJOt36pLUZl9lT4qnGMS 4/zfCavx4sTqMds4GEUbKy4RR6EjXu7t+u3T7smMh0ynJba8l91oKlf8FkvVARXe w1S73p/7AOJzjL85BWJ0lDDRqmYlTyFz4vDcyaG3QifszdEHkFYe86ibUyTJBXSe /dQz6wI++XN5fTQoc0P/YAnD+7uc/YYsWSCNINfPotiNmQfuvNT4Bzg7IaIK/vdc QIeONi8Y7xCpbYoVY7exvaOGMSOij2qZl0K+WWij5O7UjMjsrOh5GXhfTtg0xn8c GQMWeXy0HujqnAxYn3hiQFYYhtPKRe3vvzu9pMix+9+i2kE60YAFtSvq5mEtfa7I 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applying tok3_decode_names.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-0350f432-ca3e-4d55-88d3-19b6a49b1e8f SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package staden-io-lib dpkg-buildpackage: info: source version 1.14.14+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean rm -f tests/.done tests/data/ce\#sorted.sam tests/data/ce\#unsorted.sam rm -f config.sub config.guess ## ## Try to verify correct ABI version right in the beginning ## Strangely enough d-shlibmove fails in detecting it in this package ## Since upstream build system creates libstaden-read.so.11.1.0 this code is not ## activated but it should be considered in case of future problems with ABI version ## #UPSTREAMABI=`grep ^VERS_CURRENT configure.in | sed 's/^VERS_CURRENT[[:space:]]*=\([0-9]\+\)[[:space:]]*/\1/'` ; \ #DEBABI=`grep '^Package: libstaden-read[0-9]\+' debian/control | sed 's/Package: libstaden-read\([0-9]\+\)/\1/'` ; \ #if [ ${UPSTREAMABI} -ne ${DEBABI} ] ; then \ # echo "Upstream has bumped ABI to ${UPSTREAMABI} but Debian is using libstaden-read${DEBABI} (see bug #710225)" ; \ # exit 1 ; \ #fi make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch --no-parallel dh_update_autotools_config -a dh_autoreconf -a libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:81: warning: The macro `AC_PROG_LIBTOOL' is obsolete. configure.ac:81: You should run autoupdate. m4/libtool.m4:100: AC_PROG_LIBTOOL is expanded from... configure.ac:81: the top level configure.ac:101: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:101: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... acinclude.m4:40: LIBCURL_CHECK_CONFIG is expanded from... configure.ac:101: the top level configure.ac:102: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:102: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... acinclude.m4:281: ZLIB_CHECK_CONFIG is expanded from... configure.ac:102: the top level configure.ac:102: warning: The macro `AC_LANG_C' is obsolete. configure.ac:102: You should run autoupdate. ./lib/autoconf/c.m4:72: AC_LANG_C is expanded from... acinclude.m4:281: ZLIB_CHECK_CONFIG is expanded from... configure.ac:102: the top level configure.ac:156: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:156: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... m4/ax_with_libdeflate.m4:31: AX_LIBDEFLATE is expanded from... configure.ac:156: the top level configure.ac:157: warning: The macro `AC_HELP_STRING' is obsolete. configure.ac:157: You should run autoupdate. ./lib/autoconf/general.m4:204: AC_HELP_STRING is expanded from... m4/ax_with_zstd.m4:31: AX_ZSTD is expanded from... configure.ac:157: the top level configure.ac:190: warning: The macro `AC_HEADER_STDC' is obsolete. configure.ac:190: You should run autoupdate. ./lib/autoconf/headers.m4:704: AC_HEADER_STDC is expanded from... configure.ac:190: the top level configure.ac:255: warning: AC_OUTPUT should be used without arguments. configure.ac:255: You should run autoupdate. configure.ac:79: installing './compile' configure.ac:81: installing './config.guess' configure.ac:81: installing './config.sub' configure.ac:10: installing './missing' io_lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/<>' export ac_cv_func_mmap_fixed_mapped=yes && dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=aarch64-linux-gnu configure: loading site script /etc/dpkg-cross/cross-config.arm64 Reading Cross Config Cache (/etc/dpkg-cross/cross-config.arm64) Reading /etc/dpkg-cross/cross-config.cache checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for aarch64-linux-gnu-strip... aarch64-linux-gnu-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for aarch64-linux-gnu-gcc... aarch64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether aarch64-linux-gnu-gcc accepts -g... yes checking for aarch64-linux-gnu-gcc option to enable C11 features... none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of aarch64-linux-gnu-gcc... none checking build system type... x86_64-pc-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by aarch64-linux-gnu-gcc... /usr/aarch64-linux-gnu/bin/ld checking if the linker (/usr/aarch64-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/aarch64-linux-gnu-nm -B checking the name lister (/usr/bin/aarch64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/aarch64-linux-gnu/bin/ld option to reload object files... -r checking for aarch64-linux-gnu-file... no checking for file... file configure: WARNING: using cross tools not prefixed with host triplet checking for aarch64-linux-gnu-objdump... aarch64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for aarch64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-linux-gnu-ar... aarch64-linux-gnu-ar checking for archiver @FILE support... @ checking for aarch64-linux-gnu-strip... (cached) aarch64-linux-gnu-strip checking for aarch64-linux-gnu-ranlib... aarch64-linux-gnu-ranlib checking command to parse /usr/bin/aarch64-linux-gnu-nm -B output from aarch64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for aarch64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/param.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if aarch64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for aarch64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if aarch64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if aarch64-linux-gnu-gcc static flag -static works... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the aarch64-linux-gnu-gcc linker (/usr/aarch64-linux-gnu/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for C compiler warning flags... -Wall checking for gawk... (cached) mawk checking for curl-config... /usr/bin/curl-config checking for the version of libcurl... 7.86.0 checking whether libcurl just needs -lcurl... yes checking whether libcurl is usable... yes checking for curl_free... yes checking for inflateEnd in -lz... yes checking for zlib.h... yes checking for library containing gethostbyname... none required checking for library containing socket... none required checking for BZ2_bzBuffToBuffCompress in -lbz2... yes checking for lzma_easy_buffer_encode in -llzma... yes checking for bsc_compress in -lbsc... no checking whether byte ordering is bigendian... (cached) no checking for egrep... (cached) /usr/bin/grep -E checking for sys/wait.h that is POSIX.1 compatible... yes checking for fcntl.h... yes checking for limits.h... yes checking for unistd.h... (cached) yes checking for malloc.h... yes checking for zlib.h... (cached) yes checking for stdio_ext.h... yes checking whether byte ordering is bigendian... (cached) no checking size of short... 2 checking size of int... 4 checking size of long... 8 checking for inline... inline checking for mode_t... yes checking for fileno... yes checking for fstat... yes checking for mallopt... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for getpagesize... yes checking for working mmap... (cached) yes checking for library containing pthread_join... none required checking for library containing cos... -lm checking for strdup... yes checking for fsync... yes checking that generated files are newer than configure... done === configuring in htscodecs (/<>/htscodecs) configure: running /bin/bash ./configure '--prefix=/usr' --disable-option-checking '--build=x86_64-linux-gnu' '--includedir=/usr/include' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--disable-silent-rules' '--libdir=/usr/lib/aarch64-linux-gnu' '--runstatedir=/run' '--disable-maintainer-mode' '--disable-dependency-tracking' '--host=aarch64-linux-gnu' 'build_alias=x86_64-linux-gnu' 'host_alias=aarch64-linux-gnu' 'CFLAGS=-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security' 'LDFLAGS=-Wl,-z,relro -Wl,-z,now' 'CPPFLAGS=-Wdate-time -D_FORTIFY_SOURCE=2' '--disable-shared' '--with-pic' '--srcdir=.' --cache-file= configure: loading site script /etc/dpkg-cross/cross-config.arm64 Reading Cross Config Cache (/etc/dpkg-cross/cross-config.arm64) Reading /etc/dpkg-cross/cross-config.cache checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for aarch64-linux-gnu-strip... aarch64-linux-gnu-strip checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for aarch64-linux-gnu-gcc... aarch64-linux-gnu-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether aarch64-linux-gnu-gcc accepts -g... yes checking for aarch64-linux-gnu-gcc option to accept ISO C89... none needed checking whether aarch64-linux-gnu-gcc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of aarch64-linux-gnu-gcc... none checking build system type... x86_64-pc-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by aarch64-linux-gnu-gcc... /usr/aarch64-linux-gnu/bin/ld checking if the linker (/usr/aarch64-linux-gnu/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/aarch64-linux-gnu-nm -B checking the name lister (/usr/bin/aarch64-linux-gnu-nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/aarch64-linux-gnu/bin/ld option to reload object files... -r checking for aarch64-linux-gnu-objdump... aarch64-linux-gnu-objdump checking how to recognize dependent libraries... pass_all checking for aarch64-linux-gnu-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for aarch64-linux-gnu-ar... aarch64-linux-gnu-ar checking for archiver @FILE support... @ checking for aarch64-linux-gnu-strip... (cached) aarch64-linux-gnu-strip checking for aarch64-linux-gnu-ranlib... aarch64-linux-gnu-ranlib checking command to parse /usr/bin/aarch64-linux-gnu-nm -B output from aarch64-linux-gnu-gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for aarch64-linux-gnu-mt... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... aarch64-linux-gnu-gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if aarch64-linux-gnu-gcc supports -fno-rtti -fno-exceptions... no checking for aarch64-linux-gnu-gcc option to produce PIC... -fPIC -DPIC checking if aarch64-linux-gnu-gcc PIC flag -fPIC -DPIC works... yes checking if aarch64-linux-gnu-gcc static flag -static works... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... yes checking if aarch64-linux-gnu-gcc supports -c -o file.o... (cached) yes checking whether the aarch64-linux-gnu-gcc linker (/usr/aarch64-linux-gnu/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for C compiler warning flags... -Wall checking for inflateEnd in -lz... yes checking zlib.h usability... yes checking zlib.h presence... yes checking for zlib.h... yes checking for BZ2_bzBuffToBuffCompress in -lbz2... yes checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for unistd.h... (cached) yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking for zlib.h... (cached) yes checking for library containing pthread_join... none required checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating htscodecs/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands configure: creating ./config.status config.status: creating Makefile config.status: creating io_lib/Makefile config.status: creating progs/Makefile config.status: creating tests/Makefile config.status: creating io_lib-config config.status: creating io_lib/os.h config.status: creating io_lib/version.h config.status: creating io_lib_config.h config.status: executing depfiles commands config.status: executing libtool commands -------------------------------------------------- CONFIGURE SUMMARY -------------------------------------------------- Bzip2 enabled: yes lzma enabled: yes custom-buffering enabled: yes Using own crc: yes Libcurl enabled: yes Libdeflate enabled: no have libbsc: no Have zstd: no CC: aarch64-linux-gnu-gcc CFLAGS: -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security LDFLAGS: -Wl,-z,relro -Wl,-z,now LIBS: -lm -llzma -lbz2 make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' make all-recursive make[2]: Entering directory '/<>' Making all in io_lib make[3]: Entering directory '/<>/io_lib' /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-Read.lo `test -f 'Read.c' || echo './'`Read.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Read.c -fPIC -DPIC -o .libs/libstaden_read_la-Read.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c Read.c -o libstaden_read_la-Read.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-scf_extras.lo `test -f 'scf_extras.c' || echo './'`scf_extras.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -fPIC -DPIC -o .libs/libstaden_read_la-scf_extras.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scf_extras.c -o libstaden_read_la-scf_extras.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-translate.lo `test -f 'translate.c' || echo './'`translate.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -fPIC -DPIC -o .libs/libstaden_read_la-translate.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c translate.c -o libstaden_read_la-translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-compression.lo `test -f 'compression.c' || echo './'`compression.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c compression.c -fPIC -DPIC -o .libs/libstaden_read_la-compression.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c compression.c -o libstaden_read_la-compression.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-ztr.lo `test -f 'ztr.c' || echo './'`ztr.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr.c -o libstaden_read_la-ztr.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-ztr_translate.lo `test -f 'ztr_translate.c' || echo './'`ztr_translate.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -fPIC -DPIC -o .libs/libstaden_read_la-ztr_translate.o ztr_translate.c: In function ‘ztr_encode_samples_4’: ztr_translate.c:99:20: warning: ‘%s’ directive writing up to 255 bytes into a region of size 12 [-Wformat-overflow=] 99 | *mdbytes = sprintf(*mdata, "OFFS%c%s", 0, buf) + 1; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from ztr_translate.c:73: In function ‘sprintf’, inlined from ‘ztr_encode_samples_4’ at ztr_translate.c:99:13: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 6 and 261 bytes into a destination of size 17 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c ztr_translate.c -o libstaden_read_la-ztr_translate.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-deflate_interlaced.lo `test -f 'deflate_interlaced.c' || echo './'`deflate_interlaced.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c deflate_interlaced.c -fPIC -DPIC -o .libs/libstaden_read_la-deflate_interlaced.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c deflate_interlaced.c -o libstaden_read_la-deflate_interlaced.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-fpoint.lo `test -f 'fpoint.c' || echo './'`fpoint.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fpoint.c -fPIC -DPIC -o .libs/libstaden_read_la-fpoint.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c fpoint.c -o libstaden_read_la-fpoint.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-seqIOABI.lo `test -f 'seqIOABI.c' || echo './'`seqIOABI.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOABI.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOABI.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOABI.c -o libstaden_read_la-seqIOABI.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-seqIOALF.lo `test -f 'seqIOALF.c' || echo './'`seqIOALF.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOALF.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOALF.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOALF.c -o libstaden_read_la-seqIOALF.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-expFileIO.lo `test -f 'expFileIO.c' || echo './'`expFileIO.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c expFileIO.c -fPIC -DPIC -o .libs/libstaden_read_la-expFileIO.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c expFileIO.c -o libstaden_read_la-expFileIO.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-seqIOPlain.lo `test -f 'seqIOPlain.c' || echo './'`seqIOPlain.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOPlain.c -fPIC -DPIC -o .libs/libstaden_read_la-seqIOPlain.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c seqIOPlain.c -o libstaden_read_la-seqIOPlain.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-misc_scf.lo `test -f 'misc_scf.c' || echo './'`misc_scf.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c misc_scf.c -fPIC -DPIC -o .libs/libstaden_read_la-misc_scf.o libtool: compile: 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-I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c jenkins_lookup3.c -fPIC -DPIC -o .libs/libstaden_read_la-jenkins_lookup3.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c jenkins_lookup3.c -o libstaden_read_la-jenkins_lookup3.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-mFILE.lo `test -f 'mFILE.c' || echo './'`mFILE.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c mFILE.c -fPIC -DPIC -o .libs/libstaden_read_la-mFILE.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c mFILE.c -o libstaden_read_la-mFILE.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-pooled_alloc.lo `test -f 'pooled_alloc.c' || echo './'`pooled_alloc.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c pooled_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-pooled_alloc.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c pooled_alloc.c -o libstaden_read_la-pooled_alloc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-bam.lo `test -f 'bam.c' || echo './'`bam.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bam.c -fPIC -DPIC -o .libs/libstaden_read_la-bam.o bam.c: In function ‘bam_put_seq’: bam.c:1794:5: warning: writing 8 bytes into a region of size 1 [-Wstringop-overflow=] 1794 | memcpy(bam_cigar(bn), cig, 8); | ^ In file included from bam.c:59: ../io_lib/bam.h:102:19: note: destination object ‘data’ of size 1 102 | unsigned char data; /* unknown size */ | ^~~~ In function ‘bam_cigar2tag’, inlined from ‘bam_put_seq’ at bam.c:3891:10: bam.c:1811:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1811 | *ep++ = 'G'; | ~~~~~~^~~~~ ../io_lib/bam.h: In function ‘bam_put_seq’: ../io_lib/bam.h:102:19: note: at offset 1 into destination object ‘data’ of size 1 102 | unsigned char data; /* unknown size */ | ^~~~ In function ‘bam_cigar2tag’, inlined from ‘bam_put_seq’ at bam.c:3891:10: bam.c:1812:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1812 | *ep++ = 'B'; | ~~~~~~^~~~~ ../io_lib/bam.h: In function ‘bam_put_seq’: ../io_lib/bam.h:102:19: note: at offset [2, 3] into destination object ‘data’ of size 1 102 | unsigned char data; /* unknown size */ | ^~~~ In function ‘bam_cigar2tag’, inlined from ‘bam_put_seq’ at bam.c:3891:10: bam.c:1813:11: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 1813 | *ep++ = 'I'; | ~~~~~~^~~~~ ../io_lib/bam.h: In function ‘bam_put_seq’: ../io_lib/bam.h:102:19: note: at offset [3, 4] into destination object ‘data’ of size 1 102 | unsigned char data; /* unknown size */ | ^~~~ bam.c:1815:5: warning: writing 4 bytes into a region of size 0 [-Wstringop-overflow=] 1815 | memcpy(ep, &len, 4); ep += 4; | ^ ../io_lib/bam.h:102:19: note: at offset [4, 5] into destination object ‘data’ of size 1 102 | unsigned char data; /* unknown size */ | ^~~~ libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bam.c -o libstaden_read_la-bam.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-sam_header.lo `test -f 'sam_header.c' || echo './'`sam_header.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sam_header.c -fPIC -DPIC -o .libs/libstaden_read_la-sam_header.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c sam_header.c -o libstaden_read_la-sam_header.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-cram_codecs.lo `test -f 'cram_codecs.c' || echo './'`cram_codecs.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_codecs.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_codecs.o cram_codecs.c: In function ‘cram_xrle_decode_expand_char’: cram_codecs.c:1973:5: warning: implicit declaration of function ‘rle_decode’; did you mean ‘hts_rle_decode’? [-Wimplicit-function-declaration] 1973 | rle_decode(lit_dat, lit_sz, | ^~~~~~~~~~ | hts_rle_decode cram_codecs.c: In function ‘cram_xrle_encode_flush’: cram_codecs.c:2142:15: warning: implicit declaration of function ‘rle_encode’; did you mean ‘hts_rle_encode’? [-Wimplicit-function-declaration] 2142 | out_lit = rle_encode((uint8_t *)c->e_xrle.to_flush, c->e_xrle.to_flush_size, | ^~~~~~~~~~ | hts_rle_encode cram_codecs.c:2142:13: warning: assignment to ‘uint8_t *’ {aka ‘unsigned char *’} from ‘int’ makes pointer from integer without a cast [-Wint-conversion] 2142 | out_lit = rle_encode((uint8_t *)c->e_xrle.to_flush, c->e_xrle.to_flush_size, | ^ libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_codecs.c -o libstaden_read_la-cram_codecs.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-cram_encode.lo `test -f 'cram_encode.c' || echo './'`cram_encode.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_encode.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_encode.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_encode.c -o libstaden_read_la-cram_encode.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-cram_decode.lo `test -f 'cram_decode.c' || echo './'`cram_decode.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_decode.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_decode.o cram_decode.c: In function ‘cram_to_bam’: cram_decode.c:3230:30: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 3230 | *aux++ = 'R'; *aux++ = 'G'; *aux++ = 'Z'; | ~~~~~~~^~~~~ In file included from ../io_lib/cram_structs.h:68, from ../io_lib/cram.h:57, from cram_decode.c:56: ../io_lib/bam.h:102:19: note: at offset 1 into destination object ‘data’ of size 1 102 | unsigned char data; /* unknown size */ | ^~~~ ../io_lib/bam.h:102:19: note: at offset 1 into destination object ‘data’ of size 1 cram_decode.c:3230:44: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 3230 | *aux++ = 'R'; *aux++ = 'G'; *aux++ = 'Z'; | ~~~~~~~^~~~~ ../io_lib/bam.h:102:19: note: at offset [2, 3] into destination object ‘data’ of size 1 102 | unsigned char data; /* unknown size */ | ^~~~ ../io_lib/bam.h:102:19: note: at offset [2, 3] into destination object ‘data’ of size 1 libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_decode.c -o libstaden_read_la-cram_decode.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-cram_stats.lo `test -f 'cram_stats.c' || echo './'`cram_stats.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_stats.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_stats.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_stats.c -o libstaden_read_la-cram_stats.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-cram_io.lo `test -f 'cram_io.c' || echo './'`cram_io.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_io.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_io.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_io.c -o libstaden_read_la-cram_io.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-cram_index.lo `test -f 'cram_index.c' || echo './'`cram_index.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_index.c -fPIC -DPIC -o .libs/libstaden_read_la-cram_index.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_index.c -o libstaden_read_la-cram_index.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-zfio.lo `test -f 'zfio.c' || echo './'`zfio.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c zfio.c -fPIC -DPIC -o .libs/libstaden_read_la-zfio.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c zfio.c -o libstaden_read_la-zfio.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-dstring.lo `test -f 'dstring.c' || echo './'`dstring.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c dstring.c -fPIC -DPIC -o .libs/libstaden_read_la-dstring.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c dstring.c -o libstaden_read_la-dstring.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-string_alloc.lo `test -f 'string_alloc.c' || echo './'`string_alloc.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c string_alloc.c -fPIC -DPIC -o .libs/libstaden_read_la-string_alloc.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c string_alloc.c -o libstaden_read_la-string_alloc.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-md5.lo `test -f 'md5.c' || echo './'`md5.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c md5.c -fPIC -DPIC -o .libs/libstaden_read_la-md5.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c md5.c -o libstaden_read_la-md5.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-crc32.lo `test -f 'crc32.c' || echo './'`crc32.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c crc32.c -fPIC -DPIC -o .libs/libstaden_read_la-crc32.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c crc32.c -o libstaden_read_la-crc32.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-scram.lo `test -f 'scram.c' || echo './'`scram.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scram.c -fPIC -DPIC -o .libs/libstaden_read_la-scram.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c scram.c -o libstaden_read_la-scram.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-thread_pool.lo `test -f 'thread_pool.c' || echo './'`thread_pool.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time 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libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cram_bambam.c -o libstaden_read_la-cram_bambam.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=compile aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o libstaden_read_la-bgzip.lo `test -f 'bgzip.c' || echo './'`bgzip.c libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c bgzip.c -fPIC -DPIC -o .libs/libstaden_read_la-bgzip.o libtool: compile: aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I/usr/include/htscodecs -Wdate-time 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make[3]: Leaving directory '/<>/io_lib' Making all in progs make[3]: Entering directory '/<>/progs' aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o convert_trace.o convert_trace.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o convert_trace convert_trace.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/convert_trace convert_trace.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. 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-Wl,-z -Wl,now -o .libs/scramble scramble.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_merge.o scram_merge.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_merge scram_merge.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_merge scram_merge.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_pileup.o scram_pileup.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_pileup scram_pileup.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_pileup scram_pileup.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_flagstat.o scram_flagstat.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_flagstat scram_flagstat.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_flagstat scram_flagstat.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o scram_test.o scram_test.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o scram_test scram_test.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/scram_test scram_test.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_size.o cram_size.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_size cram_size.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_size cram_size.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_filter.o cram_filter.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_filter cram_filter.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_filter cram_filter.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 make[3]: Leaving directory '/<>/progs' Making all in tests make[3]: Entering directory '/<>/tests' aarch64-linux-gnu-gcc -DHAVE_CONFIG_H -I. -I.. -I.. -I../htscodecs -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cram_io_test.o cram_io_test.c /bin/bash ../libtool --tag=CC --mode=link aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o cram_io_test cram_io_test.o ../io_lib/libstaden-read.la -lm -llzma -lbz2 libtool: link: aarch64-linux-gnu-gcc -Wall -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/cram_io_test cram_io_test.o ../io_lib/.libs/libstaden-read.so -lm -llzma -lbz2 make[3]: Leaving directory '/<>/tests' make[3]: Entering directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a make -j1 install DESTDIR=/<>/staden-io-lib-1.14.14\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' Making install in io_lib make[2]: Entering directory '/<>/io_lib' make[3]: Entering directory '/<>/io_lib' /usr/bin/mkdir -p '/<>/debian/tmp/usr/lib/aarch64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libstaden-read.la '/<>/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libstaden-read.so.14.1.1 /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.so.14.1.1 libtool: install: (cd /<>/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libstaden-read.so.14.1.1 libstaden-read.so.14 || { rm -f libstaden-read.so.14 && ln -s libstaden-read.so.14.1.1 libstaden-read.so.14; }; }) libtool: install: (cd /<>/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libstaden-read.so.14.1.1 libstaden-read.so || { rm -f libstaden-read.so && ln -s libstaden-read.so.14.1.1 libstaden-read.so; }; }) libtool: install: /usr/bin/install -c .libs/libstaden-read.lai /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.la libtool: install: /usr/bin/install -c .libs/libstaden-read.a /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.a libtool: install: aarch64-linux-gnu-ranlib /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/io_lib' make[2]: Leaving directory '/<>/io_lib' Making install in progs make[2]: Entering directory '/<>/progs' make[3]: Entering directory '/<>/progs' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c convert_trace makeSCF extract_seq extract_qual extract_fastq index_tar scf_dump scf_info scf_update get_comment hash_tar hash_extract hash_list trace_dump hash_sff append_sff ztr_dump srf_dump_all srf_index_hash srf_extract_linear srf_extract_hash srf2fastq srf2fasta srf_filter srf_info srf_list hash_exp cram_dump cram_index scramble scram_merge scram_pileup scram_flagstat scram_test cram_size cram_filter '/<>/debian/tmp/usr/bin' libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/convert_trace /<>/debian/tmp/usr/bin/convert_trace libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/makeSCF /<>/debian/tmp/usr/bin/makeSCF libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/extract_seq /<>/debian/tmp/usr/bin/extract_seq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/extract_qual /<>/debian/tmp/usr/bin/extract_qual libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/extract_fastq /<>/debian/tmp/usr/bin/extract_fastq libtool: install: /usr/bin/install -c index_tar /<>/debian/tmp/usr/bin/index_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scf_dump /<>/debian/tmp/usr/bin/scf_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scf_info /<>/debian/tmp/usr/bin/scf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scf_update /<>/debian/tmp/usr/bin/scf_update libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/get_comment /<>/debian/tmp/usr/bin/get_comment libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_tar /<>/debian/tmp/usr/bin/hash_tar libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_extract /<>/debian/tmp/usr/bin/hash_extract libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_list /<>/debian/tmp/usr/bin/hash_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/trace_dump /<>/debian/tmp/usr/bin/trace_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_sff /<>/debian/tmp/usr/bin/hash_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/append_sff /<>/debian/tmp/usr/bin/append_sff libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/ztr_dump /<>/debian/tmp/usr/bin/ztr_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_dump_all /<>/debian/tmp/usr/bin/srf_dump_all libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_index_hash /<>/debian/tmp/usr/bin/srf_index_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_extract_linear /<>/debian/tmp/usr/bin/srf_extract_linear libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_extract_hash /<>/debian/tmp/usr/bin/srf_extract_hash libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf2fastq /<>/debian/tmp/usr/bin/srf2fastq libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf2fasta /<>/debian/tmp/usr/bin/srf2fasta libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_filter /<>/debian/tmp/usr/bin/srf_filter libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_info /<>/debian/tmp/usr/bin/srf_info libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/srf_list /<>/debian/tmp/usr/bin/srf_list libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/hash_exp /<>/debian/tmp/usr/bin/hash_exp libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_dump /<>/debian/tmp/usr/bin/cram_dump libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_index /<>/debian/tmp/usr/bin/cram_index libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scramble /<>/debian/tmp/usr/bin/scramble libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_merge /<>/debian/tmp/usr/bin/scram_merge libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_pileup /<>/debian/tmp/usr/bin/scram_pileup libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_flagstat /<>/debian/tmp/usr/bin/scram_flagstat libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/scram_test /<>/debian/tmp/usr/bin/scram_test libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_size /<>/debian/tmp/usr/bin/cram_size libtool: warning: '../io_lib/libstaden-read.la' has not been installed in '/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c .libs/cram_filter /<>/debian/tmp/usr/bin/cram_filter make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/progs' make[2]: Leaving directory '/<>/progs' Making install in tests make[2]: Entering directory '/<>/tests' make[3]: Entering directory '/<>/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/<>/tests' make[2]: Leaving directory '/<>/tests' make[2]: Entering directory '/<>' make[3]: Entering directory '/<>' /usr/bin/mkdir -p '/<>/debian/tmp/usr/bin' /usr/bin/install -c io_lib-config '/<>/debian/tmp/usr/bin' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 man/man1/srf_index_hash.1 man/man1/srf_info.1 man/man1/srf_list.1 man/man1/srf2fasta.1 man/man1/srf2fastq.1 man/man1/scramble.1 '/<>/debian/tmp/usr/share/man/man1' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man3' /usr/bin/install -c -m 644 man/man3/read_scf_header.3 man/man3/read_allocate.3 man/man3/ExperimentFile.3 man/man3/write_reading.3 man/man3/write_scf.3 man/man3/read_deallocate.3 man/man3/fwrite_reading.3 man/man3/read2scf.3 man/man3/scf2read.3 man/man3/fwrite_scf.3 man/man3/write_scf_header.3 man/man3/read_reading.3 man/man3/read_scf.3 man/man3/exp2read.3 man/man3/fread_reading.3 man/man3/read2exp.3 man/man3/fread_scf.3 '/<>/debian/tmp/usr/share/man/man3' /usr/bin/mkdir -p '/<>/debian/tmp/usr/share/man/man4' /usr/bin/install -c -m 644 man/man4/Read.4 '/<>/debian/tmp/usr/share/man/man4' /usr/bin/mkdir -p '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/Read.h io_lib/scf_extras.h io_lib/translate.h io_lib/abi.h io_lib/fpoint.h io_lib/seqIOABI.h io_lib/alf.h io_lib/expFileIO.h io_lib/plain.h io_lib/scf.h io_lib/sff.h io_lib/array.h io_lib/compress.h io_lib/error.h io_lib/mach-io.h io_lib/misc.h io_lib/open_trace_file.h io_lib/tar_format.h io_lib/traceType.h io_lib/xalloc.h io_lib/mFILE.h io_lib/stdio_hack.h io_lib/vlen.h io_lib/hash_table.h io_lib/jenkins_lookup3.h io_lib/os.h io_lib/compression.h io_lib/ztr.h io_lib/deflate_interlaced.h io_lib/srf.h io_lib/pooled_alloc.h io_lib/cram.h io_lib/cram_structs.h io_lib/cram_io.h io_lib/cram_encode.h io_lib/cram_decode.h io_lib/cram_codecs.h io_lib/cram_index.h io_lib/cram_stats.h io_lib/cram_bambam.h '/<>/debian/tmp/usr/include/io_lib' /usr/bin/install -c -m 644 io_lib/zfio.h io_lib/scram.h io_lib/bam.h io_lib/sam_header.h io_lib/dstring.h io_lib/string_alloc.h io_lib/md5.h io_lib/thread_pool.h io_lib/binning.h io_lib/bgzip.h io_lib/version.h '/<>/debian/tmp/usr/include/io_lib' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' debian/rules override_dh_install-arch make[1]: Entering directory '/<>' dh_install -a mkdir -p /<>/debian/libstaden-read-dev/usr/bin mv /<>/debian/staden-io-lib-utils/usr/bin/io_lib-config /<>/debian/libstaden-read-dev/usr/bin # # Call d-shlibmove to comply with library packaging guide d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev "debian/tmp/usr/include" usr \ --override s/libhtscodecs2-dev/libhtscodecs-dev/ \ debian/tmp/usr/lib/*/libstaden-read.so Library package automatic movement utility --> libbz2-dev package exists. --> libcurl4-gnutls-dev package exists. --> libhtscodecs-dev package exists. --> liblzma-dev package exists. --> zlib1g-dev package exists. set -e install -d -m 755 debian/libstaden-read-dev/usr/lib/aarch64-linux-gnu install -d -m 755 debian/libstaden-read14/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.a debian/libstaden-read-dev/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.so debian/libstaden-read-dev/usr/lib/aarch64-linux-gnu mv /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.so.14 debian/libstaden-read14/usr/lib/aarch64-linux-gnu mv /<>/debian/tmp/usr/lib/aarch64-linux-gnu/libstaden-read.so.14.1.1 debian/libstaden-read14/usr/lib/aarch64-linux-gnu PKGDEV=libstaden-read-dev PKGSHL=libstaden-read14 install -d -m 755 debian/libstaden-read-dev/usr mv debian/tmp/usr/include debian/libstaden-read-dev/usr mkdir -p /<>/debian/libstaden-read-dev/usr/include/io_lib/ cp /<>/io_lib_config.h /<>/debian/libstaden-read-dev/usr/include/io_lib/ # make sure io_lib-config --libs will not return -pie (see #825461) find debian/*/usr/bin -name io_lib-config -exec sed -i -e 's/ *-fPIE//' -e 's/ *-pie//' \{\} \; make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'staden-io-lib-utils' in '../staden-io-lib-utils_1.14.14+dfsg-2_arm64.deb'. dpkg-deb: building package 'staden-io-lib-utils-dbgsym' in '../staden-io-lib-utils-dbgsym_1.14.14+dfsg-2_arm64.deb'. dpkg-deb: building package 'libstaden-read-dev' in '../libstaden-read-dev_1.14.14+dfsg-2_arm64.deb'. dpkg-deb: building package 'libstaden-read14' in '../libstaden-read14_1.14.14+dfsg-2_arm64.deb'. dpkg-deb: building package 'libstaden-read14-dbgsym' in '../libstaden-read14-dbgsym_1.14.14+dfsg-2_arm64.deb'. dpkg-genbuildinfo --build=any -O../staden-io-lib_1.14.14+dfsg-2_arm64.buildinfo dpkg-genchanges --build=any -O../staden-io-lib_1.14.14+dfsg-2_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-10-29T23:56:42Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ staden-io-lib_1.14.14+dfsg-2_arm64.changes: ------------------------------------------- Format: 1.8 Date: Fri, 28 Oct 2022 07:19:58 +0200 Source: staden-io-lib Binary: libstaden-read-dev libstaden-read14 libstaden-read14-dbgsym staden-io-lib-utils staden-io-lib-utils-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 1.14.14+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libstaden-read-dev - development files for libstaden-read libstaden-read14 - Staden library for reading and writing DNA sequencing results staden-io-lib-utils - programs for manipulating DNA sequencing files Closes: 1022282 Changes: staden-io-lib (1.14.14+dfsg-2) unstable; urgency=medium . * Work around missing declaration of encode_names in libhtscodecs2 version 1.3.0 Closes: #1022282 * Standards-Version: 4.6.1 (routine-update) * Set upstream metadata fields: Archive. 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/<>/staden-io-lib_1.14.14+dfsg-2_arm64.changes.new could not be renamed to /<>/staden-io-lib_1.14.14+dfsg-2_arm64.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: staden-io-lib Binary: libstaden-read-dev libstaden-read14 libstaden-read14-dbgsym staden-io-lib-utils staden-io-lib-utils-dbgsym Architecture: arm64 Version: 1.14.14+dfsg-2 Checksums-Md5: 0bbeb3ff9713db3bcdd0a2718c4a5d9a 329960 libstaden-read-dev_1.14.14+dfsg-2_arm64.deb b33d4d26a135e276df548f1dbdae50a5 554964 libstaden-read14-dbgsym_1.14.14+dfsg-2_arm64.deb ddd122bd53335c07772d8e1253f8f082 246644 libstaden-read14_1.14.14+dfsg-2_arm64.deb 5fc2183fa8dfc1fc950f7d14c2ac27a2 366356 staden-io-lib-utils-dbgsym_1.14.14+dfsg-2_arm64.deb be08f72bcbe84103cab795d2cc1cc4c9 167708 staden-io-lib-utils_1.14.14+dfsg-2_arm64.deb Checksums-Sha1: a5f45d55f2226905439e83f4c58d1956520df109 329960 libstaden-read-dev_1.14.14+dfsg-2_arm64.deb 94da41494edc2c17e72ac95a474320be091578a8 554964 libstaden-read14-dbgsym_1.14.14+dfsg-2_arm64.deb e77a15f4544be2cd5a82068cbc8d952e35a3df04 246644 libstaden-read14_1.14.14+dfsg-2_arm64.deb c9d83f679687d9bd0acd2ee92f73a60d79662f96 366356 staden-io-lib-utils-dbgsym_1.14.14+dfsg-2_arm64.deb bd46b4f1963410ecc43b3c9664a932844b91b525 167708 staden-io-lib-utils_1.14.14+dfsg-2_arm64.deb Checksums-Sha256: 61f43a53a3a68ea5bc2d791610a8f3108d4f032ace66cd18710a55aa9f9c6975 329960 libstaden-read-dev_1.14.14+dfsg-2_arm64.deb b029c2190fb495953058ba3bdc7fd23beddc61ca99e958bab697581608893d3a 554964 libstaden-read14-dbgsym_1.14.14+dfsg-2_arm64.deb 87b1db12f707fa4bd66f43e82f768b922c7edb1a30e2ee045c58ccb50d0e6fa6 246644 libstaden-read14_1.14.14+dfsg-2_arm64.deb 7ce75dc7b4029f06dbd082ec3919f0bbd10629fbb5139f255dfa07ebd653a2ca 366356 staden-io-lib-utils-dbgsym_1.14.14+dfsg-2_arm64.deb 46adb19621adedd6fa1875375b98da1e425008fd294cfa704f728595ad6fe3ea 167708 staden-io-lib-utils_1.14.14+dfsg-2_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 29 Oct 2022 23:56:41 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: adduser (= 3.129), apt (= 2.5.3+b1), autoconf (= 2.71-2), automake (= 1:1.16.5-1.3), autopoint (= 0.21-9), autotools-dev (= 20220109.1), base-files (= 12.3), base-passwd (= 3.6.1), bash (= 5.2-2), binutils (= 2.39-8), binutils-common (= 2.39-8), binutils-x86-64-linux-gnu (= 2.39-8), bsdextrautils (= 2.38.1-1.1+b1), bsdutils (= 1:2.38.1-1.1+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:12.2.0-1), cpp-11 (= 11.3.0-8), cpp-12 (= 12.2.0-7), d-shlibs (= 0.104), dash (= 0.5.11+git20210903+057cd650a4ed-9), debconf (= 1.5.79), debhelper (= 13.10.1), debian-archive-keyring (= 2021.1.1), debianutils (= 5.7-0.3), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.0-1), diffutils (= 1:3.8-1), dpkg (= 1.21.9+b1), dpkg-dev (= 1.21.9), dwz (= 0.14+20220924-2), file (= 1:5.41-4), findutils (= 4.9.0-3), g++ (= 4:12.2.0-1), g++-12 (= 12.2.0-7), gcc (= 4:12.2.0-1), gcc-11 (= 11.3.0-8), gcc-11-base (= 11.3.0-8), gcc-12 (= 12.2.0-7), gcc-12-base (= 12.2.0-7), gettext (= 0.21-9), gettext-base (= 0.21-9), gpgv (= 2.2.40-1), grep (= 3.8-3), groff-base (= 1.22.4-8), gzip (= 1.12-1), hostname (= 3.23), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-1), libapt-pkg6.0 (= 2.5.3+b1), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-8), libasan8 (= 12.2.0-7), libatomic1 (= 12.2.0-7), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.7-1.1), libaudit1 (= 1:3.0.7-1.1+b1), libbinutils (= 2.39-8), libblkid1 (= 2.38.1-1.1+b1), libbrotli1 (= 1.0.9-2+b4), libbz2-1.0 (= 1.0.8-5+b1), libbz2-dev (= 1.0.8-5+b1), libc-bin (= 2.35-4), libc-dev-bin (= 2.35-4), libc6 (= 2.35-4), libc6-dev (= 2.35-4), libcap-ng0 (= 0.8.3-1+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 12.2.0-7), libcom-err2 (= 1.46.6~rc1-1+b1), libcrypt-dev (= 1:4.4.28-2), libcrypt1 (= 1:4.4.28-2), libctf-nobfd0 (= 2.39-8), libctf0 (= 2.39-8), libcurl3-gnutls (= 7.86.0-1), libcurl4-gnutls-dev (= 7.86.0-1), libdb5.3 (= 5.3.28+dfsg1-0.10), libdebconfclient0 (= 0.264), libdebhelper-perl (= 13.10.1), libdpkg-perl (= 1.21.9), libelf1 (= 0.187-4), libffi8 (= 3.4.4-1), libfile-find-rule-perl (= 0.34-2), libfile-stripnondeterminism-perl (= 1.13.0-1), libgcc-11-dev (= 11.3.0-8), libgcc-12-dev (= 12.2.0-7), libgcc-s1 (= 12.2.0-7), libgcrypt20 (= 1.10.1-2), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1), libgnutls30 (= 3.7.8-2), libgomp1 (= 12.2.0-7), libgpg-error0 (= 1.46-1), libgprofng0 (= 2.39-8), libgssapi-krb5-2 (= 1.20-1+b1), libhogweed6 (= 3.8.1-2), libhtscodecs-dev (= 1.3.0-4), libhtscodecs2 (= 1.3.0-4), libicu71 (= 71.1-3), libidn2-0 (= 2.3.3-1+b1), libisl23 (= 0.25-1), libitm1 (= 12.2.0-7), libk5crypto3 (= 1.20-1+b1), libkeyutils1 (= 1.6.3-1), libkrb5-3 (= 1.20-1+b1), libkrb5support0 (= 1.20-1+b1), libldap-2.5-0 (= 2.5.13+dfsg-2+b1), liblsan0 (= 12.2.0-7), liblz4-1 (= 1.9.4-1), liblzma-dev (= 5.2.7-0.1), liblzma5 (= 5.2.7-0.1), libmagic-mgc (= 1:5.41-4), libmagic1 (= 1:5.41-4), libmount1 (= 2.38.1-1.1+b1), libmpc3 (= 1.2.1-2), libmpfr6 (= 4.1.0-3), libnettle8 (= 3.8.1-2), libnghttp2-14 (= 1.50.0-1+b1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libp11-kit0 (= 0.24.1-1), libpam-modules (= 1.5.2-5), libpam-modules-bin (= 1.5.2-5), libpam-runtime (= 1.5.2-5), libpam0g (= 1.5.2-5), libpcre2-8-0 (= 10.40-2), libperl5.36 (= 5.36.0-4), libpipeline1 (= 1.5.6-3), libpsl5 (= 0.21.0-1.2), libquadmath0 (= 12.2.0-7), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.28+dfsg-8), libsasl2-modules-db (= 2.1.28+dfsg-8), libseccomp2 (= 2.5.4-1+b1), libselinux1 (= 3.4-1+b2), libsemanage-common (= 3.4-1), libsemanage2 (= 3.4-1+b2), libsepol2 (= 3.4-2), libsmartcols1 (= 2.38.1-1.1+b1), libssh2-1 (= 1.10.0-3+b1), libssl3 (= 3.0.5-4), libstdc++-12-dev (= 12.2.0-7), libstdc++6 (= 12.2.0-7), libsub-override-perl (= 0.09-4), libsystemd0 (= 252~rc3-2), libtasn1-6 (= 4.19.0-2), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.3+20220423-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-4), libtsan0 (= 11.3.0-8), libtsan2 (= 12.2.0-7), libubsan1 (= 12.2.0-7), libuchardet0 (= 0.0.7-1), libudev1 (= 252~rc3-2), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-1.1+b1), libxml2 (= 2.9.14+dfsg-1+b1), libxxhash0 (= 0.8.1-1), libzstd1 (= 1.5.2+dfsg-1), linux-libc-dev (= 6.0.5-1), login (= 1:4.12.3+dfsg1-2), m4 (= 1.4.19-1), make (= 4.3-4.1), man-db (= 2.11.0-1+b1), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.3+20220423-2), ncurses-bin (= 6.3+20220423-2), passwd (= 1:4.12.3+dfsg1-2), patch (= 2.7.6-7), perl (= 5.36.0-4), perl-base (= 5.36.0-4), perl-modules-5.36 (= 5.36.0-4), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.05-6), tar (= 1.34+dfsg-1), usrmerge (= 33), util-linux (= 2.38.1-1.1+b1), util-linux-extra (= 2.38.1-1.1+b1), xz-utils (= 5.2.7-0.1), zlib1g (= 1:1.2.11.dfsg-4.1), zlib1g-dev (= 1:1.2.11.dfsg-4.1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1666934398" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ libstaden-read-dev_1.14.14+dfsg-2_arm64.deb ------------------------------------------- new Debian package, version 2.0. size 329960 bytes: control archive=2468 bytes. 831 bytes, 18 lines control 4178 bytes, 64 lines md5sums Package: libstaden-read-dev Source: staden-io-lib Version: 1.14.14+dfsg-2 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 1296 Depends: libstaden-read14 (= 1.14.14+dfsg-2), libbz2-dev, libcurl4-gnutls-dev, libhtscodecs-dev, liblzma-dev, zlib1g-dev Section: libdevel Priority: optional Homepage: https://github.com/jkbonfield/io_lib Description: development files for libstaden-read This package contains the header and development files needed to build programs and packages using the Staden io_lib. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2022-10-28 05:19 ./ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/bin/ -rwxr-xr-x root/root 902 2022-10-28 05:19 ./usr/bin/io_lib-config drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/include/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/include/io_lib/ -rw-r--r-- root/root 10263 2022-10-28 05:19 ./usr/include/io_lib/Read.h -rw-r--r-- root/root 2471 2022-10-28 05:19 ./usr/include/io_lib/abi.h -rw-r--r-- root/root 2480 2022-10-28 05:19 ./usr/include/io_lib/alf.h -rw-r--r-- root/root 3536 2022-10-28 05:19 ./usr/include/io_lib/array.h -rw-r--r-- root/root 24892 2022-10-28 05:19 ./usr/include/io_lib/bam.h -rw-r--r-- root/root 2398 2022-10-28 05:19 ./usr/include/io_lib/bgzip.h -rw-r--r-- root/root 2075 2022-10-28 05:19 ./usr/include/io_lib/binning.h -rw-r--r-- root/root 6268 2022-10-28 05:19 ./usr/include/io_lib/compress.h -rw-r--r-- root/root 15348 2022-10-28 05:19 ./usr/include/io_lib/compression.h -rw-r--r-- root/root 2405 2022-10-28 05:19 ./usr/include/io_lib/cram.h -rw-r--r-- root/root 4777 2022-10-28 05:19 ./usr/include/io_lib/cram_bambam.h -rw-r--r-- root/root 8417 2022-10-28 05:19 ./usr/include/io_lib/cram_codecs.h -rw-r--r-- root/root 3612 2022-10-28 05:19 ./usr/include/io_lib/cram_decode.h -rw-r--r-- root/root 3769 2022-10-28 05:19 ./usr/include/io_lib/cram_encode.h -rw-r--r-- root/root 3365 2022-10-28 05:19 ./usr/include/io_lib/cram_index.h -rw-r--r-- root/root 17635 2022-10-28 05:19 ./usr/include/io_lib/cram_io.h -rw-r--r-- root/root 2587 2022-10-28 05:19 ./usr/include/io_lib/cram_stats.h -rw-r--r-- root/root 34861 2022-10-28 05:19 ./usr/include/io_lib/cram_structs.h -rw-r--r-- root/root 4951 2022-10-28 05:19 ./usr/include/io_lib/deflate_interlaced.h -rw-r--r-- root/root 9589 2022-10-28 05:19 ./usr/include/io_lib/dstring.h -rw-r--r-- root/root 2430 2022-10-28 05:19 ./usr/include/io_lib/error.h -rw-r--r-- root/root 10646 2022-10-28 05:19 ./usr/include/io_lib/expFileIO.h -rw-r--r-- root/root 2392 2022-10-28 05:19 ./usr/include/io_lib/fpoint.h -rw-r--r-- root/root 7764 2022-10-28 05:19 ./usr/include/io_lib/hash_table.h -rw-r--r-- root/root 6213 2022-10-28 05:19 ./usr/include/io_lib/io_lib_config.h -rw-r--r-- root/root 923 2022-10-28 05:19 ./usr/include/io_lib/jenkins_lookup3.h -rw-r--r-- root/root 2969 2022-10-28 05:19 ./usr/include/io_lib/mFILE.h -rw-r--r-- root/root 6459 2022-10-28 05:19 ./usr/include/io_lib/mach-io.h -rw-r--r-- root/root 1479 2022-10-28 05:19 ./usr/include/io_lib/md5.h -rw-r--r-- root/root 6841 2022-10-28 05:19 ./usr/include/io_lib/misc.h -rw-r--r-- root/root 5965 2022-10-28 05:19 ./usr/include/io_lib/open_trace_file.h -rw-r--r-- root/root 10619 2022-10-28 05:19 ./usr/include/io_lib/os.h -rw-r--r-- root/root 4216 2022-10-28 05:19 ./usr/include/io_lib/plain.h -rw-r--r-- root/root 2183 2022-10-28 05:19 ./usr/include/io_lib/pooled_alloc.h -rw-r--r-- root/root 13914 2022-10-28 05:19 ./usr/include/io_lib/sam_header.h -rw-r--r-- root/root 13901 2022-10-28 05:19 ./usr/include/io_lib/scf.h -rw-r--r-- root/root 4238 2022-10-28 05:19 ./usr/include/io_lib/scf_extras.h -rw-r--r-- root/root 7999 2022-10-28 05:19 ./usr/include/io_lib/scram.h -rw-r--r-- root/root 8453 2022-10-28 05:19 ./usr/include/io_lib/seqIOABI.h -rw-r--r-- root/root 3793 2022-10-28 05:19 ./usr/include/io_lib/sff.h -rw-r--r-- root/root 7141 2022-10-28 05:19 ./usr/include/io_lib/srf.h -rw-r--r-- root/root 3350 2022-10-28 05:19 ./usr/include/io_lib/stdio_hack.h -rw-r--r-- root/root 2423 2022-10-28 05:19 ./usr/include/io_lib/string_alloc.h -rw-r--r-- root/root 3253 2022-10-28 05:19 ./usr/include/io_lib/tar_format.h -rw-r--r-- root/root 6759 2022-10-28 05:19 ./usr/include/io_lib/thread_pool.h -rw-r--r-- root/root 5383 2022-10-28 05:19 ./usr/include/io_lib/traceType.h -rw-r--r-- root/root 7365 2022-10-28 05:19 ./usr/include/io_lib/translate.h -rw-r--r-- root/root 1862 2022-10-28 05:19 ./usr/include/io_lib/version.h -rw-r--r-- root/root 3578 2022-10-28 05:19 ./usr/include/io_lib/vlen.h -rw-r--r-- root/root 2562 2022-10-28 05:19 ./usr/include/io_lib/xalloc.h -rw-r--r-- root/root 2118 2022-10-28 05:19 ./usr/include/io_lib/zfio.h -rw-r--r-- root/root 8081 2022-10-28 05:19 ./usr/include/io_lib/ztr.h drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/aarch64-linux-gnu/ -rw-r--r-- root/root 875252 2022-10-28 05:19 ./usr/lib/aarch64-linux-gnu/libstaden-read.a lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/lib/aarch64-linux-gnu/libstaden-read.so -> libstaden-read.so.14.1.1 drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc/libstaden-read-dev/ -rw-r--r-- root/root 1271 2022-10-28 05:19 ./usr/share/doc/libstaden-read-dev/changelog.Debian.gz -rw-r--r-- root/root 30043 2021-03-18 09:57 ./usr/share/doc/libstaden-read-dev/changelog.gz -rw-r--r-- root/root 7267 2022-10-28 05:19 ./usr/share/doc/libstaden-read-dev/copyright drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/man/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/man/man3/ -rw-r--r-- root/root 2119 2022-10-28 05:19 ./usr/share/man/man3/ExperimentFile.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/exp2read.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/fread_reading.3.gz -> read_reading.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/fread_scf.3.gz -> read_scf.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/fwrite_reading.3.gz -> write_reading.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/fwrite_scf.3.gz -> write_scf.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/read2exp.3.gz -> scf2read.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/read2scf.3.gz -> scf2read.3.gz -rw-r--r-- root/root 591 2022-10-28 05:19 ./usr/share/man/man3/read_allocate.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/read_deallocate.3.gz -> read_allocate.3.gz -rw-r--r-- root/root 1550 2022-10-28 05:19 ./usr/share/man/man3/read_reading.3.gz -rw-r--r-- root/root 610 2022-10-28 05:19 ./usr/share/man/man3/read_scf.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/read_scf_header.3.gz -> read_scf.3.gz -rw-r--r-- root/root 783 2022-10-28 05:19 ./usr/share/man/man3/scf2read.3.gz -rw-r--r-- root/root 804 2022-10-28 05:19 ./usr/share/man/man3/write_reading.3.gz -rw-r--r-- root/root 608 2022-10-28 05:19 ./usr/share/man/man3/write_scf.3.gz lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man3/write_scf_header.3.gz -> write_scf.3.gz drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/man/man4/ lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/man/man4/Read.4.gz -> ../man3/read_reading.3.gz libstaden-read14-dbgsym_1.14.14+dfsg-2_arm64.deb ------------------------------------------------ new Debian package, version 2.0. size 554964 bytes: control archive=572 bytes. 434 bytes, 13 lines control 106 bytes, 1 lines md5sums Package: libstaden-read14-dbgsym Source: staden-io-lib Version: 1.14.14+dfsg-2 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 594 Depends: libstaden-read14 (= 1.14.14+dfsg-2) Section: debug Priority: optional Multi-Arch: same Description: debug symbols for libstaden-read14 Build-Ids: 96c29808161643bb7ba17a53c2a2d02ed3e36ee4 drwxr-xr-x root/root 0 2022-10-28 05:19 ./ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/debug/.build-id/96/ -rw-r--r-- root/root 597896 2022-10-28 05:19 ./usr/lib/debug/.build-id/96/c29808161643bb7ba17a53c2a2d02ed3e36ee4.debug drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/share/doc/libstaden-read14-dbgsym -> libstaden-read14 libstaden-read14_1.14.14+dfsg-2_arm64.deb ----------------------------------------- new Debian package, version 2.0. size 246644 bytes: control archive=4776 bytes. 1006 bytes, 20 lines control 323 bytes, 4 lines md5sums 53 bytes, 1 lines shlibs 24264 bytes, 789 lines symbols 68 bytes, 2 lines triggers Package: libstaden-read14 Source: staden-io-lib Version: 1.14.14+dfsg-2 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 604 Depends: libbz2-1.0, libc6 (>= 2.34), libcurl3-gnutls (>= 7.16.2), libhtscodecs2 (>= 1.3.0), liblzma5 (>= 5.1.1alpha+20120614), zlib1g (>= 1:1.2.0.2) Section: libs Priority: optional Multi-Arch: same Homepage: https://github.com/jkbonfield/io_lib Description: Staden library for reading and writing DNA sequencing results This package contains the Staden io_lib, that is renamed in Debian and Fedora ‘staden-read’ instead of ‘read’. This library supports various DNA sequence read formats, in particular SCF, ABI, ALF, CTF, ZTR, SFF and SRF. . The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. drwxr-xr-x root/root 0 2022-10-28 05:19 ./ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/lib/aarch64-linux-gnu/ lrwxrwxrwx root/root 0 2022-10-28 05:19 ./usr/lib/aarch64-linux-gnu/libstaden-read.so.14 -> libstaden-read.so.14.1.1 -rw-r--r-- root/root 541232 2022-10-28 05:19 ./usr/lib/aarch64-linux-gnu/libstaden-read.so.14.1.1 drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc/libstaden-read14/ -rw-r--r-- root/root 1270 2022-10-28 05:19 ./usr/share/doc/libstaden-read14/changelog.Debian.gz -rw-r--r-- root/root 30043 2021-03-18 09:57 ./usr/share/doc/libstaden-read14/changelog.gz -rw-r--r-- root/root 7267 2022-10-28 05:19 ./usr/share/doc/libstaden-read14/copyright staden-io-lib-utils-dbgsym_1.14.14+dfsg-2_arm64.deb --------------------------------------------------- new Debian package, version 2.0. size 366356 bytes: control archive=2240 bytes. 1861 bytes, 12 lines control 3913 bytes, 37 lines md5sums Package: staden-io-lib-utils-dbgsym Source: staden-io-lib Version: 1.14.14+dfsg-2 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 670 Depends: staden-io-lib-utils (= 1.14.14+dfsg-2) Section: debug Priority: optional Description: debug symbols for staden-io-lib-utils Build-Ids: 055d5a50910cfb121ee98785ce40802b6e051850 05693000d0fe70f9c331275e762ebc0c27e0cfa9 16c52be94c25fb5ccdf174b1512c6b96cd13044c 18623ab82c319befb72e7ab14ab9b00b131420d4 25b77d22c8315cbd4517fa481b6e00d8c212d64f 2ae2c5f441cec56ad2190ff398c8f1a22379d77a 2b8f8a074d8b8581e750bdfd6a710f3511eaa56b 3d86ad4e9653f6e7bf31f791ec1ee5efa8c141ce 3f6667c44a9789d21b94d94215a131d4a6396c6f 43447809c830c815680509022efdb0f00e026f91 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staden-io-lib Version: 1.14.14+dfsg-2 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 2508 Depends: libc6 (>= 2.34), libstaden-read14 (>= 1.14.13) Suggests: staden-io-lib-examples Section: science Priority: optional Homepage: https://github.com/jkbonfield/io_lib Description: programs for manipulating DNA sequencing files The io_lib from the Staden package is a library of file reading and writing code to provide a general purpose trace file (and Experiment File) reading interface. It has been compiled and tested on a variety of unix systems, MacOS X and MS Windows. . This package contains the programs that are distributed with the Staden io_lib for manipulating and converting sequencing data files, and in particular files to manipulate short reads generated by second and third generation sequencers and stored in SRF format. drwxr-xr-x root/root 0 2022-10-28 05:19 ./ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/bin/ -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/append_sff -rwxr-xr-x root/root 67840 2022-10-28 05:19 ./usr/bin/convert_trace -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/cram_dump -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/cram_filter -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/cram_index -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/cram_size -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/extract_fastq -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/extract_qual -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/extract_seq -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/get_comment -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/hash_exp -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/hash_extract -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/hash_list -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/hash_sff -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/hash_tar -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/index_tar -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/makeSCF -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scf_dump -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scf_info -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scf_update -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scram_flagstat -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scram_merge -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scram_pileup -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scram_test -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/scramble -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/srf2fasta -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/srf2fastq -rwxr-xr-x root/root 67752 2022-10-28 05:19 ./usr/bin/srf_dump_all -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/srf_extract_hash -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/srf_extract_linear -rwxr-xr-x root/root 67792 2022-10-28 05:19 ./usr/bin/srf_filter -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/srf_index_hash -rwxr-xr-x root/root 67816 2022-10-28 05:19 ./usr/bin/srf_info -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/srf_list -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/trace_dump -rwxr-xr-x root/root 67680 2022-10-28 05:19 ./usr/bin/ztr_dump drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc-base/ -rw-r--r-- root/root 304 2022-10-28 05:19 ./usr/share/doc-base/staden-io-lib-utils.staden-io-lib-hash-file-format -rw-r--r-- root/root 349 2022-10-28 05:19 ./usr/share/doc-base/staden-io-lib-utils.staden-io-lib-ztr-format drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/doc/staden-io-lib-utils/ -rw-r--r-- root/root 3266 2018-09-12 16:21 ./usr/share/doc/staden-io-lib-utils/Hash_File_Format -rw-r--r-- root/root 6866 2021-03-18 09:57 ./usr/share/doc/staden-io-lib-utils/README.md.gz -rw-r--r-- root/root 20980 2018-09-12 16:21 ./usr/share/doc/staden-io-lib-utils/ZTR_format.gz -rw-r--r-- root/root 1273 2022-10-28 05:19 ./usr/share/doc/staden-io-lib-utils/changelog.Debian.gz -rw-r--r-- root/root 30043 2021-03-18 09:57 ./usr/share/doc/staden-io-lib-utils/changelog.gz -rw-r--r-- root/root 7267 2022-10-28 05:19 ./usr/share/doc/staden-io-lib-utils/copyright drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/man/ drwxr-xr-x root/root 0 2022-10-28 05:19 ./usr/share/man/man1/ -rw-r--r-- root/root 380 2022-10-28 05:19 ./usr/share/man/man1/append_sff.1.gz -rw-r--r-- root/root 2950 2022-10-28 05:19 ./usr/share/man/man1/scramble.1.gz -rw-r--r-- root/root 358 2022-10-28 05:19 ./usr/share/man/man1/srf2fasta.1.gz -rw-r--r-- root/root 1321 2022-10-28 05:19 ./usr/share/man/man1/srf2fastq.1.gz -rw-r--r-- root/root 836 2022-10-28 05:19 ./usr/share/man/man1/srf_dump_all.1.gz -rw-r--r-- root/root 859 2022-10-28 05:19 ./usr/share/man/man1/srf_filter.1.gz -rw-r--r-- root/root 572 2022-10-28 05:19 ./usr/share/man/man1/srf_index_hash.1.gz -rw-r--r-- root/root 748 2022-10-28 05:19 ./usr/share/man/man1/srf_info.1.gz -rw-r--r-- root/root 804 2022-10-28 05:19 ./usr/share/man/man1/srf_list.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [583 B] Get:5 copy:/<>/apt_archive ./ Packages [660 B] Fetched 2206 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils unzip 0 upgraded, 130 newly installed, 0 to remove and 0 not upgraded. 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libclass-method-modifiers-perl all 2.13-2 [19.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:35 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.45-1+b3 [13.7 kB] Get:36 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.28-2 [16.4 kB] Get:37 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:38 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.928-3 [9724 B] Get:39 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:40 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:41 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:42 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.32-1+b1 [130 kB] Get:43 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:46 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:47 http://localhost:3142/debian sid/main amd64 libexporter-tiny-perl all 1.004003-1 [39.0 kB] Get:48 http://localhost:3142/debian sid/main amd64 liblist-moreutils-xs-perl amd64 0.430-3+b1 [42.1 kB] Get:49 http://localhost:3142/debian sid/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:50 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:51 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:54 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:55 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:56 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:58 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:59 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:60 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:61 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:62 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:64 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:65 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:66 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:67 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:68 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:69 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.41-1 [81.1 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.10-1 [24.0 kB] Get:72 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:73 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get:74 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:75 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get:76 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:77 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:78 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.075-1 [220 kB] Get:79 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:80 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:81 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:82 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.67-1 [194 kB] Get:83 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:84 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:85 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:86 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:87 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004004-1 [13.3 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:89 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.58-3 [36.5 kB] Get:90 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-1 [16.1 kB] Get:91 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-4 [42.0 kB] Get:92 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:94 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:95 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:96 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:97 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005004-3 [60.5 kB] Get:98 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:99 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:100 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:101 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:102 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-2+b1 [11.2 kB] Get:103 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get:104 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:105 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.124-1 [56.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:107 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.009-1+b2 [11.6 kB] Get:108 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b2 [43.1 kB] Get:109 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:110 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.001+ds-1+b1 [102 kB] Get:111 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.001+ds-1+b1 [105 kB] Get:112 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-2 [10.7 kB] Get:113 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.25-1+b1 [53.4 kB] Get:114 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.27-1+b1 [28.8 kB] Get:115 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:117 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.13-1+b2 [12.6 kB] Get:118 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:119 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:120 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:121 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-1+b4 [20.0 kB] Get:122 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.15-1 [120 kB] Get:123 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:124 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.84+ds-1+b1 [34.7 kB] Get:125 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-4 [64.0 kB] Get:126 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:127 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:128 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:129 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-27 [172 kB] Get:130 http://localhost:3142/debian sid/main amd64 lintian all 2.115.3 [1417 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.1 MB in 0s (107 MB/s) Selecting previously unselected package netbase. (Reading database ... 22251 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.1_all.deb ... Unpacking readline-common (8.2-1.1) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.5-4_amd64.deb ... Unpacking openssl (3.0.5-4) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20211016_all.deb ... Unpacking ca-certificates (20211016) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.5-4_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-4) ... Selecting previously unselected package libreadline8:amd64. 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Setting up plzip (1.10-4) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-1+b4) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.13-2) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl (0.45-1+b3) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-2+b1) ... Setting up libcpanel-json-xs-perl:amd64 (4.32-1+b1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-27) ... Setting up libsqlite3-0:amd64 (3.39.4-1) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up libyaml-libyaml-perl (0.84+ds-1+b1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.5-4) ... Setting up libconfig-tiny-perl (2.28-2) ... Setting up libsereal-encoder-perl:amd64 (5.001+ds-1+b1) ... Setting up liblist-utilsby-perl (0.12-1) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.928-3) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004004-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.25-1+b1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-3) ... Setting up libperlio-utf8-strict-perl (0.009-1+b2) ... Setting up t1utils (1.41-4) ... Setting up diffstat (1.64-1) ... Setting up libvariable-magic-perl (0.63-1+b1) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:amd64 (0.22-2+b1) ... Setting up liblist-moreutils-xs-perl (0.430-3+b1) ... Setting up libparams-util-perl (1.102-2+b1) ... Setting up libtime-duration-perl (1.21-1) ... Setting up libtext-xslate-perl:amd64 (3.5.9-1+b2) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libregexp-ipv6-perl (0.03-3) ... Setting up libsub-name-perl:amd64 (0.26-2+b1) ... Setting up libsyntax-keyword-try-perl (0.27-1+b1) ... Setting up libdata-validate-domain-perl (0.10-1.1) ... Setting up libproc-processtable-perl:amd64 (0.634-1+b2) ... Setting up libpath-tiny-perl (0.124-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-2) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-2) ... Setting up libexporter-tiny-perl (1.004003-1) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.5-4) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up readline-common (8.2-1.1) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.001+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.16-1) ... Setting up iso-codes (4.11.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up libfile-listing-perl (6.15-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libreadline8:amd64 (8.2-1.1) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1+b2) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b4) ... Setting up ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 127 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.79-1+b1) ... Setting up gpgconf (2.2.40-1) ... Setting up libio-socket-ssl-perl (2.075-1) ... Setting up gpg (2.2.40-1) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libhttp-message-perl (6.41-1) ... Setting up libhtml-form-perl (6.10-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.54-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005004-3) ... Setting up liblist-someutils-perl (0.58-3) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.67-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.15-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.115.3) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.35-4) ... Processing triggers for man-db (2.11.0-1+b1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20211016) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 50416 Build-Time: 62 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 12 Job: staden-io-lib_1.14.14+dfsg-2 Lintian: pass Machine Architecture: amd64 Package: staden-io-lib Package-Time: 84 Source-Version: 1.14.14+dfsg-2 Space: 50416 Status: successful Version: 1.14.14+dfsg-2 -------------------------------------------------------------------------------- Finished at 2022-10-29T23:56:42Z Build needed 00:01:24, 50416k disk space