sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | stringtie 2.2.1+ds-3 (i386) Fri, 26 Apr 2024 02:40:32 +0000 | +==============================================================================+ Package: stringtie Version: 2.2.1+ds-3 Source Version: 2.2.1+ds-3 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.1FJtH6TloK... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/stringtie-zpKrEV/resolver-ULutpC' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [198 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.6 MB] Get:3 http://mirror.einval.org/debian unstable/main arm64 Packages [9751 kB] Get:4 http://mirror.einval.org/debian unstable/main i386 Packages [9698 kB] Fetched 30.2 MB in 8s (3932 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt libapt-pkg6.0t64 libsystemd0 libudev1 linux-libc-dev 5 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 4938 kB of archives. After this operation, 50.2 kB of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 libsystemd0 arm64 255.5-1 [338 kB] Get:2 http://mirror.einval.org/debian unstable/main arm64 libudev1 arm64 255.5-1 [119 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg6.0t64 arm64 2.9.2 [881 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 apt arm64 2.9.2 [1319 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev all 6.7.12-1 [2281 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 4938 kB in 0s (59.8 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11927 files and directories currently installed.) Preparing to unpack .../libsystemd0_255.5-1_arm64.deb ... Unpacking libsystemd0:arm64 (255.5-1) over (255.4-1+b1) ... Setting up libsystemd0:arm64 (255.5-1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11925 files and directories currently installed.) Preparing to unpack .../libapt-pkg6.0t64_2.9.2_arm64.deb ... Unpacking libapt-pkg6.0t64:arm64 (2.9.2) over (2.9.1) ... Setting up libapt-pkg6.0t64:arm64 (2.9.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11925 files and directories currently installed.) Preparing to unpack .../archives/apt_2.9.2_arm64.deb ... Unpacking apt (2.9.2) over (2.9.1) ... Setting up apt (2.9.2) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11925 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_6.7.12-1_all.deb ... Unpacking linux-libc-dev (6.7.12-1) over (6.7.9-2) ... Setting up linux-libc-dev (6.7.12-1) ... Processing triggers for libc-bin (2.37-18) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'stringtie' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/stringtie.git Please use: git clone https://salsa.debian.org/med-team/stringtie.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 2065 kB of source archives. Get:1 http://mirror.einval.org/debian unstable/main stringtie 2.2.1+ds-3 (dsc) [2391 B] Get:2 http://mirror.einval.org/debian unstable/main stringtie 2.2.1+ds-3 (tar) [1756 kB] Get:3 http://mirror.einval.org/debian unstable/main stringtie 2.2.1+ds-3 (tar) [295 kB] Get:4 http://mirror.einval.org/debian unstable/main stringtie 2.2.1+ds-3 (diff) [11.8 kB] Fetched 2065 kB in 0s (6833 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/stringtie-zpKrEV/stringtie-2.2.1+ds' with '<>' I: NOTICE: Log filtering will replace 'build/stringtie-zpKrEV' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), libbam-dev, libhts-dev, libbz2-dev, help2man, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 13), libbam-dev, libhts-dev, libbz2-dev, help2man, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-i386:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [757 B] Get:5 copy:/<>/apt_archive ./ Packages [799 B] Fetched 2165 B in 0s (123 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-13-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-i686-linux-gnu g++-i686-linux-gnu gcc-13-base:i386 gcc-13-cross-base gcc-13-i686-linux-gnu gcc-13-i686-linux-gnu-base gcc-14-base:i386 gcc-14-cross-base gcc-i686-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbam-dev:i386 libbrotli1:i386 libbz2-1.0:i386 libbz2-dev:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl3t64-gnutls:i386 libcurl4-gnutls-dev:i386 libdb5.3t64:i386 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:i386 libdeflate0:i386 libelf1t64 libfakeroot libffi8:i386 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:i386 libgcc-13-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgmp10:i386 libgnutls30t64:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libhogweed6t64:i386 libhts-dev:i386 libhts3t64:i386 libhtscodecs2:i386 libicu72 libidn2-0:i386 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.5-0:i386 liblocale-gettext-perl liblzma-dev:i386 liblzma5:i386 libmagic-mgc libmagic1t64 libnettle8t64:i386 libnghttp2-14:i386 libp11-kit0:i386 libpipeline1 libpsl5t64:i386 libquadmath0:i386 libquadmath0-i386-cross librtmp1:i386 libsasl2-2:i386 libsasl2-modules-db:i386 libssh2-1t64:i386 libssl3t64:i386 libstdc++-13-dev:i386 libstdc++-13-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtasn1-6:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring5:i386 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:i386 m4 man-db po-debconf sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:i386 libc-l10n:i386 locales:i386 libnss-nis:i386 libnss-nisplus:i386 manpages-dev:i386 libcurl4-doc:i386 libgnutls28-dev:i386 libidn-dev:i386 libkrb5-dev:i386 libldap2-dev:i386 librtmp-dev:i386 libssh2-1-dev:i386 pkgconf:i386 gnutls-bin:i386 krb5-doc:i386 krb5-user:i386 liblzma-doc:i386 libstdc++-13-doc:i386 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc:i386 ca-certificates:i386 libarchive-cpio-perl krb5-locales:i386 libldap-common:i386 publicsuffix:i386 libsasl2-modules:i386 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-13-i686-linux-gnu cpp-i686-linux-gnu cross-config crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-i686-linux-gnu g++-i686-linux-gnu gcc-13-base:i386 gcc-13-cross-base gcc-13-i686-linux-gnu gcc-13-i686-linux-gnu-base gcc-14-base:i386 gcc-14-cross-base gcc-i686-linux-gnu gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbam-dev:i386 libbrotli1:i386 libbz2-1.0:i386 libbz2-dev:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcom-err2:i386 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:i386 libcrypt1:i386 libcurl3t64-gnutls:i386 libcurl4-gnutls-dev:i386 libdb5.3t64:i386 libdebhelper-perl libdebian-dpkgcross-perl libdeflate-dev:i386 libdeflate0:i386 libelf1t64 libfakeroot libffi8:i386 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:i386 libgcc-13-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libgmp10:i386 libgnutls30t64:i386 libgomp1:i386 libgomp1-i386-cross libgssapi-krb5-2:i386 libhogweed6t64:i386 libhts-dev:i386 libhts3t64:i386 libhtscodecs2:i386 libicu72 libidn2-0:i386 libio-string-perl libitm1:i386 libitm1-i386-cross libk5crypto3:i386 libkeyutils1:i386 libkrb5-3:i386 libkrb5support0:i386 libldap-2.5-0:i386 liblocale-gettext-perl liblzma-dev:i386 liblzma5:i386 libmagic-mgc libmagic1t64 libnettle8t64:i386 libnghttp2-14:i386 libp11-kit0:i386 libpipeline1 libpsl5t64:i386 libquadmath0:i386 libquadmath0-i386-cross librtmp1:i386 libsasl2-2:i386 libsasl2-modules-db:i386 libssh2-1t64:i386 libssl3t64:i386 libstdc++-13-dev:i386 libstdc++-13-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsub-override-perl libtasn1-6:i386 libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring5:i386 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl libzstd1:i386 m4 man-db po-debconf sbuild-build-depends-main-dummy:i386 sensible-utils ucf zlib1g:i386 zlib1g-dev:i386 0 upgraded, 129 newly installed, 0 to remove and 0 not upgraded. Need to get 100 MB of archives. After this operation, 389 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [932 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-7 [14.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.45-3 [43.0 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-3+b1 [1126 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.40-6 [92.6 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.12.1-1 [1394 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.21-14 [496 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 gcc-13-i686-linux-gnu-base arm64 13.2.0-12cross1 [42.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 cpp-13-i686-linux-gnu arm64 13.2.0-12cross1 [9276 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 cpp-i686-linux-gnu arm64 4:13.2.0-7 [4720 B] Get:22 http://mirror.einval.org/debian unstable/main arm64 cross-config all 2.6.20 [16.3 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 binutils-i686-linux-gnu arm64 2.42-4 [2377 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-13-cross-base all 13.2.0-12cross1 [38.1 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 gcc-14-cross-base all 14-20240127-1cross1 [37.9 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libc6-i386-cross all 2.37-12cross1 [1339 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-i386-cross all 14-20240127-1cross1 [69.3 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libgomp1-i386-cross all 14-20240127-1cross1 [135 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libitm1-i386-cross all 14-20240127-1cross1 [26.7 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libatomic1-i386-cross all 14-20240127-1cross1 [7280 B] Get:31 http://mirror.einval.org/debian unstable/main arm64 libasan8-i386-cross all 14-20240127-1cross1 [2602 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-i386-cross all 14-20240127-1cross1 [719 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libubsan1-i386-cross all 14-20240127-1cross1 [1050 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-i386-cross all 14-20240127-1cross1 [233 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libgcc-13-dev-i386-cross all 13.2.0-12cross1 [2497 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 gcc-13-i686-linux-gnu arm64 13.2.0-12cross1 [17.8 MB] Get:37 http://mirror.einval.org/debian unstable/main arm64 gcc-i686-linux-gnu arm64 4:13.2.0-7 [1444 B] Get:38 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-i386-cross all 2.37-12cross1 [1716 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libstdc++-13-dev-i386-cross all 13.2.0-12cross1 [2276 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 g++-13-i686-linux-gnu arm64 13.2.0-12cross1 [10.1 MB] Get:41 http://mirror.einval.org/debian unstable/main arm64 g++-i686-linux-gnu arm64 4:13.2.0-7 [1196 B] Get:42 http://mirror.einval.org/debian unstable/main arm64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b2 [624 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-1+b3 [299 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libyaml-perl all 1.31-1 [64.8 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 dpkg-cross all 2.6.20 [25.8 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-i386 all 12.10 [3480 B] Get:58 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:65 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.15.3 [901 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.34-1 [28.4 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.34-1 [73.5 kB] Get:73 http://mirror.einval.org/debian unstable/main i386 gcc-13-base i386 13.2.0-23 [44.5 kB] Get:74 http://mirror.einval.org/debian unstable/main i386 gcc-14-base i386 14-20240330-1 [43.2 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 help2man arm64 1.49.3 [198 kB] Get:76 http://mirror.einval.org/debian unstable/main i386 libgcc-s1 i386 14-20240330-1 [88.0 kB] Get:77 http://mirror.einval.org/debian unstable/main i386 libc6 i386 2.37-18 [2619 kB] Get:78 http://mirror.einval.org/debian unstable/main i386 libasan8 i386 14-20240330-1 [2603 kB] Get:79 http://mirror.einval.org/debian unstable/main i386 libatomic1 i386 14-20240330-1 [7548 B] Get:80 http://mirror.einval.org/debian unstable/main i386 zlib1g i386 1:1.3.dfsg-3.1 [83.6 kB] Get:81 http://mirror.einval.org/debian unstable/main i386 libcrypt1 i386 1:4.4.36-4 [95.7 kB] Get:82 http://mirror.einval.org/debian unstable/main i386 libcrypt-dev i386 1:4.4.36-4 [125 kB] Get:83 http://mirror.einval.org/debian unstable/main i386 libc6-dev i386 2.37-18 [1722 kB] Get:84 http://mirror.einval.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg-3.1 [915 kB] Get:85 http://mirror.einval.org/debian unstable/main i386 libbam-dev i386 0.1.19+dfsg-6 [130 kB] Get:86 http://mirror.einval.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get:87 http://mirror.einval.org/debian unstable/main i386 libbz2-1.0 i386 1.0.8-5.1 [37.6 kB] Get:88 http://mirror.einval.org/debian unstable/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get:89 http://mirror.einval.org/debian unstable/main i386 libcom-err2 i386 1.47.0-2.4 [20.6 kB] Get:90 http://mirror.einval.org/debian unstable/main i386 libgmp10 i386 2:6.3.0+dfsg-2+b1 [571 kB] Get:91 http://mirror.einval.org/debian unstable/main i386 libnettle8t64 i386 3.9.1-2.2 [309 kB] Get:92 http://mirror.einval.org/debian unstable/main i386 libhogweed6t64 i386 3.9.1-2.2 [330 kB] Get:93 http://mirror.einval.org/debian unstable/main i386 libunistring5 i386 1.2-1 [433 kB] Get:94 http://mirror.einval.org/debian unstable/main i386 libidn2-0 i386 2.3.7-2 [129 kB] Get:95 http://mirror.einval.org/debian unstable/main i386 libffi8 i386 3.4.6-1 [21.2 kB] Get:96 http://mirror.einval.org/debian unstable/main i386 libp11-kit0 i386 0.25.3-4 [416 kB] Get:97 http://mirror.einval.org/debian unstable/main i386 libtasn1-6 i386 4.19.0-3+b2 [50.6 kB] Get:98 http://mirror.einval.org/debian unstable/main i386 libgnutls30t64 i386 3.8.5-2 [1436 kB] Get:99 http://mirror.einval.org/debian unstable/main i386 libkrb5support0 i386 1.20.1-6+b1 [36.1 kB] Get:100 http://mirror.einval.org/debian unstable/main i386 libk5crypto3 i386 1.20.1-6+b1 [83.2 kB] Get:101 http://mirror.einval.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get:102 http://mirror.einval.org/debian unstable/main i386 libzstd1 i386 1.5.5+dfsg2-2 [282 kB] Get:103 http://mirror.einval.org/debian unstable/main i386 libssl3t64 i386 3.2.1-3 [2234 kB] Get:104 http://mirror.einval.org/debian unstable/main i386 libkrb5-3 i386 1.20.1-6+b1 [360 kB] Get:105 http://mirror.einval.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.20.1-6+b1 [145 kB] Get:106 http://mirror.einval.org/debian unstable/main i386 libdb5.3t64 i386 5.3.28+dfsg2-7 [759 kB] Get:107 http://mirror.einval.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-6 [20.5 kB] Get:108 http://mirror.einval.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-6 [60.6 kB] Get:109 http://mirror.einval.org/debian unstable/main i386 libldap-2.5-0 i386 2.5.16+dfsg-2 [198 kB] Get:110 http://mirror.einval.org/debian unstable/main i386 libnghttp2-14 i386 1.61.0-1+b1 [84.0 kB] Get:111 http://mirror.einval.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get:112 http://mirror.einval.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get:113 http://mirror.einval.org/debian unstable/main i386 libssh2-1t64 i386 1.11.0-4.1+b2 [225 kB] Get:114 http://mirror.einval.org/debian unstable/main i386 libcurl3t64-gnutls i386 8.7.1-3 [467 kB] Get:115 http://mirror.einval.org/debian unstable/main i386 libcurl4-gnutls-dev i386 8.7.1-3 [589 kB] Get:116 http://mirror.einval.org/debian unstable/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get:117 http://mirror.einval.org/debian unstable/main i386 libdeflate-dev i386 1.20-1 [56.0 kB] Get:118 http://mirror.einval.org/debian unstable/main i386 libgomp1 i386 14-20240330-1 [138 kB] Get:119 http://mirror.einval.org/debian unstable/main i386 libitm1 i386 14-20240330-1 [27.2 kB] Get:120 http://mirror.einval.org/debian unstable/main i386 libstdc++6 i386 14-20240330-1 [764 kB] Get:121 http://mirror.einval.org/debian unstable/main i386 libubsan1 i386 14-20240330-1 [1049 kB] Get:122 http://mirror.einval.org/debian unstable/main i386 libquadmath0 i386 14-20240330-1 [233 kB] Get:123 http://mirror.einval.org/debian unstable/main i386 libgcc-13-dev i386 13.2.0-23 [2496 kB] Get:124 http://mirror.einval.org/debian unstable/main i386 libhtscodecs2 i386 1.6.0-1+b1 [68.5 kB] Get:125 http://mirror.einval.org/debian unstable/main i386 liblzma5 i386 5.6.1+really5.4.5-1 [248 kB] Get:126 http://mirror.einval.org/debian unstable/main i386 libhts3t64 i386 1.19+ds-1.1+b1 [491 kB] Get:127 http://mirror.einval.org/debian unstable/main i386 liblzma-dev i386 5.6.1+really5.4.5-1 [304 kB] Get:128 http://mirror.einval.org/debian unstable/main i386 libhts-dev i386 1.19+ds-1.1+b1 [1660 kB] Get:129 http://mirror.einval.org/debian unstable/main i386 libstdc++-13-dev i386 13.2.0-23 [2331 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 100 MB in 1s (75.6 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11925 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-7_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../003-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-14+b1_arm64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../006-libuchardet0_0.0.8-1+b1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../007-groff-base_1.23.0-3+b1_arm64.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../008-bsdextrautils_2.40-6_arm64.deb ... Unpacking bsdextrautils (2.40-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../009-libpipeline1_1.5.7-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../010-man-db_2.12.1-1_arm64.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package ucf. Preparing to unpack .../011-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. Preparing to unpack .../012-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../013-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../014-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../015-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../016-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package gcc-13-i686-linux-gnu-base:arm64. Preparing to unpack .../017-gcc-13-i686-linux-gnu-base_13.2.0-12cross1_arm64.deb ... Unpacking gcc-13-i686-linux-gnu-base:arm64 (13.2.0-12cross1) ... Selecting previously unselected package cpp-13-i686-linux-gnu. Preparing to unpack .../018-cpp-13-i686-linux-gnu_13.2.0-12cross1_arm64.deb ... Unpacking cpp-13-i686-linux-gnu (13.2.0-12cross1) ... Selecting previously unselected package cpp-i686-linux-gnu. Preparing to unpack .../019-cpp-i686-linux-gnu_4%3a13.2.0-7_arm64.deb ... Unpacking cpp-i686-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package cross-config. Preparing to unpack .../020-cross-config_2.6.20_all.deb ... Unpacking cross-config (2.6.20) ... Selecting previously unselected package binutils-i686-linux-gnu. Preparing to unpack .../021-binutils-i686-linux-gnu_2.42-4_arm64.deb ... Unpacking binutils-i686-linux-gnu (2.42-4) ... Selecting previously unselected package gcc-13-cross-base. Preparing to unpack .../022-gcc-13-cross-base_13.2.0-12cross1_all.deb ... Unpacking gcc-13-cross-base (13.2.0-12cross1) ... Selecting previously unselected package gcc-14-cross-base. Preparing to unpack .../023-gcc-14-cross-base_14-20240127-1cross1_all.deb ... Unpacking gcc-14-cross-base (14-20240127-1cross1) ... Selecting previously unselected package libc6-i386-cross. Preparing to unpack .../024-libc6-i386-cross_2.37-12cross1_all.deb ... Unpacking libc6-i386-cross (2.37-12cross1) ... Selecting previously unselected package libgcc-s1-i386-cross. Preparing to unpack .../025-libgcc-s1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libgcc-s1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libgomp1-i386-cross. Preparing to unpack .../026-libgomp1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libgomp1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libitm1-i386-cross. Preparing to unpack .../027-libitm1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libitm1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libatomic1-i386-cross. Preparing to unpack .../028-libatomic1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libatomic1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libasan8-i386-cross. Preparing to unpack .../029-libasan8-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libasan8-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libstdc++6-i386-cross. Preparing to unpack .../030-libstdc++6-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libstdc++6-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libubsan1-i386-cross. Preparing to unpack .../031-libubsan1-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libubsan1-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libquadmath0-i386-cross. Preparing to unpack .../032-libquadmath0-i386-cross_14-20240127-1cross1_all.deb ... Unpacking libquadmath0-i386-cross (14-20240127-1cross1) ... Selecting previously unselected package libgcc-13-dev-i386-cross. Preparing to unpack .../033-libgcc-13-dev-i386-cross_13.2.0-12cross1_all.deb ... Unpacking libgcc-13-dev-i386-cross (13.2.0-12cross1) ... Selecting previously unselected package gcc-13-i686-linux-gnu. Preparing to unpack .../034-gcc-13-i686-linux-gnu_13.2.0-12cross1_arm64.deb ... Unpacking gcc-13-i686-linux-gnu (13.2.0-12cross1) ... Selecting previously unselected package gcc-i686-linux-gnu. Preparing to unpack .../035-gcc-i686-linux-gnu_4%3a13.2.0-7_arm64.deb ... Unpacking gcc-i686-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package libc6-dev-i386-cross. Preparing to unpack .../036-libc6-dev-i386-cross_2.37-12cross1_all.deb ... Unpacking libc6-dev-i386-cross (2.37-12cross1) ... Selecting previously unselected package libstdc++-13-dev-i386-cross. Preparing to unpack .../037-libstdc++-13-dev-i386-cross_13.2.0-12cross1_all.deb ... Unpacking libstdc++-13-dev-i386-cross (13.2.0-12cross1) ... Selecting previously unselected package g++-13-i686-linux-gnu. Preparing to unpack .../038-g++-13-i686-linux-gnu_13.2.0-12cross1_arm64.deb ... Unpacking g++-13-i686-linux-gnu (13.2.0-12cross1) ... Selecting previously unselected package g++-i686-linux-gnu. Preparing to unpack .../039-g++-i686-linux-gnu_4%3a13.2.0-7_arm64.deb ... Unpacking g++-i686-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package libconfig-inifiles-perl. Preparing to unpack .../040-libconfig-inifiles-perl_3.000003-2_all.deb ... Unpacking libconfig-inifiles-perl (3.000003-2) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../041-libio-string-perl_1.08-4_all.deb ... Unpacking libio-string-perl (1.08-4) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../042-libicu72_72.1-4+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-4+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../043-libxml2_2.9.14+dfsg-1.3+b2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package libxml-namespacesupport-perl. Preparing to unpack .../044-libxml-namespacesupport-perl_1.12-2_all.deb ... Unpacking libxml-namespacesupport-perl (1.12-2) ... Selecting previously unselected package libxml-sax-base-perl. Preparing to unpack .../045-libxml-sax-base-perl_1.09-3_all.deb ... Unpacking libxml-sax-base-perl (1.09-3) ... Selecting previously unselected package libxml-sax-perl. Preparing to unpack .../046-libxml-sax-perl_1.02+dfsg-3_all.deb ... Unpacking libxml-sax-perl (1.02+dfsg-3) ... Selecting previously unselected package libxml-libxml-perl. Preparing to unpack .../047-libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b3_arm64.deb ... Unpacking libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b3) ... Selecting previously unselected package libxml-simple-perl. Preparing to unpack .../048-libxml-simple-perl_2.25-2_all.deb ... Unpacking libxml-simple-perl (2.25-2) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../049-libyaml-perl_1.31-1_all.deb ... Unpacking libyaml-perl (1.31-1) ... Selecting previously unselected package libconfig-auto-perl. Preparing to unpack .../050-libconfig-auto-perl_0.44-2_all.deb ... Unpacking libconfig-auto-perl (0.44-2) ... Selecting previously unselected package libfile-which-perl. Preparing to unpack .../051-libfile-which-perl_1.27-2_all.deb ... Unpacking libfile-which-perl (1.27-2) ... Selecting previously unselected package libfile-homedir-perl. Preparing to unpack .../052-libfile-homedir-perl_1.006-2_all.deb ... Unpacking libfile-homedir-perl (1.006-2) ... Selecting previously unselected package libdebian-dpkgcross-perl. Preparing to unpack .../053-libdebian-dpkgcross-perl_2.6.20_all.deb ... Unpacking libdebian-dpkgcross-perl (2.6.20) ... Selecting previously unselected package dpkg-cross. Preparing to unpack .../054-dpkg-cross_2.6.20_all.deb ... Unpacking dpkg-cross (2.6.20) ... Selecting previously unselected package crossbuild-essential-i386. Preparing to unpack .../055-crossbuild-essential-i386_12.10_all.deb ... Unpacking crossbuild-essential-i386 (12.10) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../056-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../057-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../058-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../059-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../060-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../061-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../062-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../063-libelf1t64_0.191-1+b1_arm64.deb ... Unpacking libelf1t64:arm64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../064-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../065-gettext_0.21-14+b1_arm64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../066-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../067-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../068-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libfakeroot:arm64. Preparing to unpack .../069-libfakeroot_1.34-1_arm64.deb ... Unpacking libfakeroot:arm64 (1.34-1) ... Selecting previously unselected package fakeroot. Preparing to unpack .../070-fakeroot_1.34-1_arm64.deb ... Unpacking fakeroot (1.34-1) ... Selecting previously unselected package gcc-13-base:i386. Preparing to unpack .../071-gcc-13-base_13.2.0-23_i386.deb ... Unpacking gcc-13-base:i386 (13.2.0-23) ... Selecting previously unselected package gcc-14-base:i386. Preparing to unpack .../072-gcc-14-base_14-20240330-1_i386.deb ... Unpacking gcc-14-base:i386 (14-20240330-1) ... 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Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up libc6-i386-cross (2.37-12cross1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up gcc-13-i686-linux-gnu-base:arm64 (13.2.0-12cross1) ... Setting up cpp-13-i686-linux-gnu (13.2.0-12cross1) ... Setting up libquadmath0-i386-cross (14-20240127-1cross1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b2) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libatomic1-i386-cross (14-20240127-1cross1) ... Setting up libgomp1-i386-cross (14-20240127-1cross1) ... Setting up libc6-dev-i386-cross (2.37-12cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up libgcc-s1-i386-cross (14-20240127-1cross1) ... Setting up dh-autoreconf (20) ... Setting up libitm1-i386-cross (14-20240127-1cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up cpp-i686-linux-gnu (4:13.2.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libasan8-i386-cross (14-20240127-1cross1) ... Setting up libstdc++6-i386-cross (14-20240127-1cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.15.3) ... Setting up libubsan1-i386-cross (14-20240127-1cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libgcc-13-dev-i386-cross (13.2.0-12cross1) ... Setting up gcc-13-i686-linux-gnu (13.2.0-12cross1) ... Setting up libstdc++-13-dev-i386-cross (13.2.0-12cross1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up gcc-i686-linux-gnu (4:13.2.0-7) ... Setting up g++-13-i686-linux-gnu (13.2.0-12cross1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up g++-i686-linux-gnu (4:13.2.0-7) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-i386 (12.10) ... Setting up libgcc-s1:i386 (14-20240330-1) ... Setting up libc6:i386 (2.37-18) ... Setting up libdb5.3t64:i386 (5.3.28+dfsg2-7) ... Setting up libffi8:i386 (3.4.6-1) ... Setting up libasan8:i386 (14-20240330-1) ... Setting up libtasn1-6:i386 (4.19.0-3+b2) ... Setting up libbz2-1.0:i386 (1.0.8-5.1) ... Setting up libstdc++6:i386 (14-20240330-1) ... Setting up libitm1:i386 (14-20240330-1) ... Setting up libhtscodecs2:i386 (1.6.0-1+b1) ... Setting up libzstd1:i386 (1.5.5+dfsg2-2) ... Setting up libkeyutils1:i386 (1.6.3-3) ... Setting up liblzma5:i386 (5.6.1+really5.4.5-1) ... Setting up libbrotli1:i386 (1.1.0-2+b3) ... Setting up libnghttp2-14:i386 (1.61.0-1+b1) ... Setting up libdeflate0:i386 (1.20-1) ... Setting up zlib1g:i386 (1:1.3.dfsg-3.1) ... Setting up libcrypt1:i386 (1:4.4.36-4) ... Setting up libcom-err2:i386 (1.47.0-2.4) ... Setting up libgomp1:i386 (14-20240330-1) ... Setting up libkrb5support0:i386 (1.20.1-6+b1) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-6) ... Setting up libnettle8t64:i386 (3.9.1-2.2) ... Setting up libgmp10:i386 (2:6.3.0+dfsg-2+b1) ... Setting up libquadmath0:i386 (14-20240330-1) ... Setting up libp11-kit0:i386 (0.25.3-4) ... Setting up libunistring5:i386 (1.2-1) ... Setting up libatomic1:i386 (14-20240330-1) ... Setting up libk5crypto3:i386 (1.20.1-6+b1) ... Setting up liblzma-dev:i386 (5.6.1+really5.4.5-1) ... Setting up libubsan1:i386 (14-20240330-1) ... Setting up libhogweed6t64:i386 (3.9.1-2.2) ... Setting up libgcc-13-dev:i386 (13.2.0-23) ... Setting up libcrypt-dev:i386 (1:4.4.36-4) ... Setting up libc6-dev:i386 (2.37-18) ... Setting up libdeflate-dev:i386 (1.20-1) ... Setting up libstdc++-13-dev:i386 (13.2.0-23) ... Setting up libbz2-dev:i386 (1.0.8-5.1) ... Setting up libssl3t64:i386 (3.2.1-3) ... Setting up libidn2-0:i386 (2.3.7-2) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-6) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg-3.1) ... Setting up libkrb5-3:i386 (1.20.1-6+b1) ... Setting up libssh2-1t64:i386 (1.11.0-4.1+b2) ... Setting up libgnutls30t64:i386 (3.8.5-2) ... Setting up libpsl5t64:i386 (0.21.2-1.1) ... Setting up libldap-2.5-0:i386 (2.5.16+dfsg-2) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libgssapi-krb5-2:i386 (1.20.1-6+b1) ... Setting up libbam-dev:i386 (0.1.19+dfsg-6) ... Setting up libcurl3t64-gnutls:i386 (8.7.1-3) ... Setting up libcurl4-gnutls-dev:i386 (8.7.1-3) ... Setting up libhts3t64:i386 (1.19+ds-1.1+b1) ... Setting up libhts-dev:i386 (1.19+ds-1.1+b1) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.37-18) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-7-arm64 #1 SMP Debian 6.1.20-1 (2023-03-19) arm64 (aarch64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-23 gcc-13_13.2.0-23 libc6-dev_2.37-18 libstdc++-13-dev_13.2.0-23 libstdc++-13-dev-i386-cross_13.2.0-12cross1 libstdc++6_14-20240330-1 libstdc++6-i386-cross_14-20240127-1cross1 linux-libc-dev_6.7.12-1 Package versions: apt_2.9.2 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13.1 base-passwd_3.6.3 bash_5.2.21-2 binutils_2.42-4 binutils-aarch64-linux-gnu_2.42-4 binutils-common_2.42-4 binutils-i686-linux-gnu_2.42-4 bsdextrautils_2.40-6 bsdutils_1:2.40-6 build-essential_12.10 bzip2_1.0.8-5.1 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-23 cpp-13-aarch64-linux-gnu_13.2.0-23 cpp-13-i686-linux-gnu_13.2.0-12cross1 cpp-aarch64-linux-gnu_4:13.2.0-7 cpp-i686-linux-gnu_4:13.2.0-7 cross-config_2.6.20 crossbuild-essential-i386_12.10 dash_0.5.12-6 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.17 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.6 dpkg-cross_2.6.20 dpkg-dev_1.22.6 dwz_0.15-1+b1 fakeroot_1.34-1 file_1:5.45-3 findutils_4.9.0-5 g++_4:13.2.0-7 g++-13_13.2.0-23 g++-13-aarch64-linux-gnu_13.2.0-23 g++-13-i686-linux-gnu_13.2.0-12cross1 g++-aarch64-linux-gnu_4:13.2.0-7 g++-i686-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-23 gcc-13-aarch64-linux-gnu_13.2.0-23 gcc-13-base_13.2.0-23 gcc-13-cross-base_13.2.0-12cross1 gcc-13-i686-linux-gnu_13.2.0-12cross1 gcc-13-i686-linux-gnu-base_13.2.0-12cross1 gcc-14-base_14-20240330-1 gcc-14-cross-base_14-20240127-1cross1 gcc-aarch64-linux-gnu_4:13.2.0-7 gcc-i686-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gpgv_2.2.40-3 grep_3.11-4 groff-base_1.23.0-3+b1 gzip_1.12-1.1 help2man_1.49.3 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-1 libapt-pkg6.0t64_2.9.2 libarchive-zip-perl_1.68-1 libasan8_14-20240330-1 libasan8-i386-cross_14-20240127-1cross1 libatomic1_14-20240330-1 libatomic1-i386-cross_14-20240127-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-2.1 libaudit1_1:3.1.2-2.1 libbam-dev_0.1.19+dfsg-6 libbinutils_2.42-4 libblkid1_2.40-6 libbrotli1_1.1.0-2+b3 libbz2-1.0_1.0.8-5.1 libbz2-dev_1.0.8-5.1 libc-bin_2.37-18 libc-dev-bin_2.37-18 libc6_2.37-18 libc6-dev_2.37-18 libc6-dev-i386-cross_2.37-12cross1 libc6-i386-cross_2.37-12cross1 libcap-ng0_0.8.5-1 libcap2_1:2.66-5 libcc1-0_14-20240330-1 libcom-err2_1.47.0-2.4 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-4 libctf0_2.42-4 libcurl3t64-gnutls_8.7.1-3 libcurl4-gnutls-dev_8.7.1-3 libdb5.3t64_5.3.28+dfsg2-7 libdebconfclient0_0.271+b3 libdebhelper-perl_13.15.3 libdebian-dpkgcross-perl_2.6.20 libdeflate-dev_1.20-1 libdeflate0_1.20-1 libdpkg-perl_1.22.6 libelf1t64_0.191-1+b1 libfakeroot_1.34-1 libffi8_3.4.6-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-13-dev_13.2.0-23 libgcc-13-dev-i386-cross_13.2.0-12cross1 libgcc-s1_14-20240330-1 libgcc-s1-i386-cross_14-20240127-1cross1 libgcrypt20_1.10.3-2 libgdbm-compat4t64_1.23-5.1+b1 libgdbm6t64_1.23-5.1+b1 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-2 libgomp1_14-20240330-1 libgomp1-i386-cross_14-20240127-1cross1 libgpg-error0_1.47-3 libgprofng0_2.42-4 libgssapi-krb5-2_1.20.1-6+b1 libhogweed6t64_3.9.1-2.2 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librtmp1_2.4+20151223.gitfa8646d.1-2+b4 libsasl2-2_2.1.28+dfsg1-6 libsasl2-modules-db_2.1.28+dfsg1-6 libseccomp2_2.5.5-1 libselinux1_3.5-2+b2 libsframe1_2.42-4 libsmartcols1_2.40-6 libssh2-1t64_1.11.0-4.1+b2 libssl3t64_3.2.1-3 libstdc++-13-dev_13.2.0-23 libstdc++-13-dev-i386-cross_13.2.0-12cross1 libstdc++6_14-20240330-1 libstdc++6-i386-cross_14-20240127-1cross1 libsub-override-perl_0.10-1 libsystemd0_255.5-1 libtasn1-6_4.19.0-3+b2 libtext-glob-perl_0.11-3 libtinfo6_6.4+20240414-1 libtool_2.4.7-7 libtsan2_14-20240330-1 libubsan1_14-20240330-1 libubsan1-i386-cross_14-20240127-1cross1 libuchardet0_0.0.8-1+b1 libudev1_255.5-1 libunistring5_1.2-1 libuuid1_2.40-6 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b3 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3+b2 libxxhash0_0.8.2-2+b1 libyaml-perl_1.31-1 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.7.12-1 login_1:4.13+dfsg1-4 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-1 mawk_1.3.4.20240123-1 ncurses-base_6.4+20240414-1 ncurses-bin_6.4+20240414-1 patch_2.7.6-7 perl_5.38.2-3.2+b2 perl-base_5.38.2-3.2+b2 perl-modules-5.38_5.38.2-3.2 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.22 sysvinit-utils_3.09-1 tar_1.35+dfsg-3 ucf_3.0043+nmu1 usrmerge_39 util-linux_2.40-6 xz-utils_5.6.1+really5.4.5-1 zlib1g_1:1.3.dfsg-3.1 zlib1g-dev_1:1.3.dfsg-3.1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: stringtie Binary: stringtie Architecture: any Version: 2.2.1+ds-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://ccb.jhu.edu/software/stringtie/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/stringtie Vcs-Git: https://salsa.debian.org/med-team/stringtie.git Testsuite: autopkgtest Testsuite-Triggers: samtools Build-Depends: debhelper-compat (= 13), libbam-dev, libhts-dev, libbz2-dev, help2man Package-List: stringtie deb science optional arch=any Checksums-Sha1: 375ba0555c56a95157755fd14d51d7cce1a868be 1755636 stringtie_2.2.1+ds.orig-debian-tests-data.tar.xz 2ec8514bb1887739f8785f93f6983b7616a2737c 294940 stringtie_2.2.1+ds.orig.tar.xz f2a0fa75d1856625f4ec144a78e5a6aa7ef6be5c 11812 stringtie_2.2.1+ds-3.debian.tar.xz Checksums-Sha256: e5f331c0d7c655465d3b6fefb10fddc441bd73a33f086cc8ee5943b393eb6164 1755636 stringtie_2.2.1+ds.orig-debian-tests-data.tar.xz f95f3f60ce107291b1e0e94ed8af88c06d7a982f7f9c479b891ac0084d5ea38a 294940 stringtie_2.2.1+ds.orig.tar.xz 1ccc2b26e24d5908b4fcada0672c67537609d2e1bf34eb10b70a065bda10cf05 11812 stringtie_2.2.1+ds-3.debian.tar.xz Files: dcd76725ba9859dc4c7bd31147859756 1755636 stringtie_2.2.1+ds.orig-debian-tests-data.tar.xz 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SIGNATURE----- gpgv: Signature made Fri Jan 26 20:37:21 2024 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./stringtie_2.2.1+ds-3.dsc: no acceptable signature found dpkg-source: info: extracting stringtie in /<> dpkg-source: info: unpacking stringtie_2.2.1+ds.orig.tar.xz dpkg-source: info: unpacking stringtie_2.2.1+ds.orig-debian-tests-data.tar.xz dpkg-source: info: unpacking stringtie_2.2.1+ds-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Makefile.patch dpkg-source: info: applying hardening.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ai386 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package stringtie dpkg-buildpackage: info: source version 2.2.1+ds-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean make -j1 clean make[2]: Entering directory '/<>' rm -f stringtie stringtie.o* ./gclib/GBase.o ./gclib/GArgs.o ./gclib/GStr.o ./gclib/GSam.o ./gclib/gdna.o ./gclib/codons.o ./gclib/GFastaIndex.o ./gclib/GFaSeqGet.o ./gclib/gff.o ./gclib/GThreads.o rlink.o tablemaker.o tmerge.o rm -f core.* make[2]: Leaving directory '/<>' rm -fr test_data rm -f SuperReads_RNA/global-1/SuperReadsR/all_tests make[1]: Leaving directory '/<>' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/stringtie.substvars debian/files rm -fr -- debian/stringtie/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' dh_auto_build -- 'LINKER=$(CXX)' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc LINKER=\$\(CXX\) make[2]: Entering directory '/<>' i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/GBase.cpp -o gclib/GBase.o i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/GArgs.cpp -o gclib/GArgs.o i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/GStr.cpp -o gclib/GStr.o In file included from gclib/GStr.h:5, from gclib/GStr.cpp:2: gclib/GStr.cpp: In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ gclib/GStr.cpp: In static member function ‘static GStr::Data* GStr::new_data(const char*, uint)’: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:39:9: note: in expansion of macro ‘GMALLOC’ 39 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp:38:15: note: ‘data’ was declared here 38 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘void GStr::make_unique()’ at gclib/GStr.cpp:91:30: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘void GStr::make_unique()’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::cut(int, int)’ at gclib/GStr.cpp:890:26: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In function ‘GStr& GStr::cut(int, int)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘void GStr::make_unique()’ at gclib/GStr.cpp:91:30, inlined from ‘char* GStr::detach()’ at gclib/GStr.cpp:130:13: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘char* GStr::detach()’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(const char*, uint)’, inlined from ‘GStr::GStr(const char*, uint)’ at gclib/GStr.cpp:157:19: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:39:9: note: in expansion of macro ‘GMALLOC’ 39 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In constructor ‘GStr::GStr(const char*, uint)’: gclib/GStr.cpp:38:15: note: ‘data’ was declared here 38 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::trim(char)’ at gclib/GStr.cpp:463:23: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::trim(char)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::trim(const char*)’ at gclib/GStr.cpp:482:23: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::trim(const char*)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::trimL(char)’ at gclib/GStr.cpp:572:23: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::trimL(char)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::trimL(const char*)’ at gclib/GStr.cpp:590:23: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::trimL(const char*)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::padR(uint, char)’ at gclib/GStr.cpp:605:23: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::padR(uint, char)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::padL(uint, char)’ at gclib/GStr.cpp:615:23: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::padL(uint, char)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::padC(uint, char)’ at gclib/GStr.cpp:626:23: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::padC(uint, char)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::tr(const char*, const char*)’ at gclib/GStr.cpp:786:25: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::tr(const char*, const char*)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::paste(const GStr&, int, int)’ at gclib/GStr.cpp:917:30: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::paste(const GStr&, int, int)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::paste(const char*, int, int)’ at gclib/GStr.cpp:950:30: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::paste(const char*, int, int)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::insert(const GStr&, int)’ at gclib/GStr.cpp:975:30: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::insert(const GStr&, int)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘GStr& GStr::insert(const char*, int)’ at gclib/GStr.cpp:1000:30: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘GStr& GStr::insert(const char*, int)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ In static member function ‘static GStr::Data* GStr::new_data(uint, uint)’, inlined from ‘size_t GStr::read(FILE*, const char*, size_t)’ at gclib/GStr.cpp:1380:22: gclib/GBase.h:176:28: warning: ‘data’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/GStr.cpp:21:9: note: in expansion of macro ‘GMALLOC’ 21 | GMALLOC(data, sizeof(Data)+len+addcap); | ^~~~~~~ gclib/GStr.cpp: In member function ‘size_t GStr::read(FILE*, const char*, size_t)’: gclib/GStr.cpp:20:15: note: ‘data’ was declared here 20 | Data* data; | ^~~~ i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/GSam.cpp -o gclib/GSam.o In file included from gclib/GSam.cpp:1: gclib/GSam.h:32:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 32 | struct { | ^ i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/gdna.cpp -o gclib/gdna.o i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/codons.cpp -o gclib/codons.o i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/GFastaIndex.cpp -o gclib/GFastaIndex.o i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/GFaSeqGet.cpp -o gclib/GFaSeqGet.o i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/gff.cpp -o gclib/gff.o In file included from gclib/gff.cpp:1: gclib/gff.h:242:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 242 | struct { | ^ gclib/gff.h:245:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 245 | struct { | ^ gclib/gff.h:343:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 343 | struct { | ^ gclib/gff.h:706:14: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 706 | struct { | ^ gclib/gff.h:1165:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 1165 | struct { | ^ gclib/gff.cpp: In constructor ‘GffLine::GffLine(GffReader*, const char*)’: gclib/gff.cpp:426:19: warning: unknown escape sequence: '\%' 426 | GMessage("Warning: unexpected tab character in last column, line truncated:\n\%s\n",l); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from gclib/gff.h:6: gclib/gff.cpp: In constructor ‘BEDLine::BEDLine(GffReader*, const char*)’: gclib/GBase.h:176:28: warning: ‘blen’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/gff.cpp:243:11: note: in expansion of macro ‘GMALLOC’ 243 | GMALLOC(blen, numexons * sizeof(char*)); | ^~~~~~~ gclib/gff.cpp:241:18: note: ‘blen’ was declared here 241 | char** blen; | ^~~~ gclib/GBase.h:176:28: warning: ‘bstart’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ gclib/gff.cpp:244:11: note: in expansion of macro ‘GMALLOC’ 244 | GMALLOC(bstart, numexons * sizeof(char*)); | ^~~~~~~ gclib/gff.cpp:242:18: note: ‘bstart’ was declared here 242 | char** bstart; | ^~~~~~ i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c gclib/GThreads.cpp -o gclib/GThreads.o i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c rlink.cpp -o rlink.o In file included from rlink.h:5, from rlink.cpp:1: ./gclib/gff.h:242:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 242 | struct { | ^ ./gclib/gff.h:245:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 245 | struct { | ^ ./gclib/gff.h:343:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 343 | struct { | ^ ./gclib/gff.h:706:14: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 706 | struct { | ^ ./gclib/gff.h:1165:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 1165 | struct { | ^ In file included from rlink.h:6: ./gclib/GSam.h:32:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 32 | struct { | ^ In file included from ./gclib/GStr.h:5, from rlink.h:4: In constructor ‘GBitVec::GBitVec(uint, bool)’, inlined from ‘GBitVec::GBitVec(uint, bool)’ at ./gclib/GBitVec.h:118:12, inlined from ‘void process_transfrags(int, int, int, GPVec&, GPVec&, CTreePat*, GIntHash&, GVec&, GList&, GVec&)’ at rlink.cpp:5826:29: ./gclib/GBase.h:176:28: warning: ‘*(void**)((char*)&trpat + offsetof(GBitVec, GBitVec::fBits))’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ ./gclib/GBitVec.h:126:5: note: in expansion of macro ‘GMALLOC’ 126 | GMALLOC(fBits, Capacity * sizeof(BitWord)); | ^~~~~~~ rlink.cpp: In function ‘void process_transfrags(int, int, int, GPVec&, GPVec&, CTreePat*, GIntHash&, GVec&, GList&, GVec&)’: rlink.cpp:5826:41: note: ‘*(void**)((char*)&trpat + offsetof(GBitVec, GBitVec::fBits))’ was declared here 5826 | GBitVec trpat(gno+edgeno); | ^~~~~ In copy constructor ‘GBitVec::GBitVec(const GBitVec&)’, inlined from ‘GBitVec::GBitVec(const GBitVec&)’ at ./gclib/GBitVec.h:150:3, inlined from ‘void process_refguides(int, int, GIntHash&, int&, GPVec&, GPVec&, int, GVec&, BundleData*)’ at rlink.cpp:11677:44: ./gclib/GBase.h:176:28: warning: ‘*(void**)((char*)&trpattern + offsetof(GBitVec, GBitVec::fBits))’ may be used uninitialized [-Wmaybe-uninitialized] 176 | #define GMALLOC(ptr,size) if (!GMalloc((pointer*)(&ptr),size)) \ | ^~ ./gclib/GBitVec.h:158:5: note: in expansion of macro ‘GMALLOC’ 158 | GMALLOC(fBits, Capacity * sizeof(BitWord)); | ^~~~~~~ rlink.cpp: In function ‘void process_refguides(int, int, GIntHash&, int&, GPVec&, GPVec&, int, GVec&, BundleData*)’: rlink.cpp:11677:41: note: ‘*(void**)((char*)&trpattern + offsetof(GBitVec, GBitVec::fBits))’ was declared here 11677 | GBitVec trpattern(transfrag[t]->pattern); | ^~~~~~~~~ In function ‘bool GMalloc(void**, long unsigned int)’, inlined from ‘GBitVec::GBitVec(const GBitVec&)’ at ./gclib/GBitVec.h:158:5, inlined from ‘GBitVec::GBitVec(const GBitVec&)’ at ./gclib/GBitVec.h:150:3, inlined from ‘GBitVec traverse_dfs(int, int, CGraphnode*, CGraphnode*, GBitVec, int, GVec&, GPVec**, GPVec**, int&, GIntHash**, int&)’ at rlink.cpp:2461:28: ./gclib/GBase.h:254:12: warning: ‘*(void**)((char*)&childparents + offsetof(GBitVec, GBitVec::fBits))’ may be used uninitialized [-Wmaybe-uninitialized] 254 | return *ptr!=NULL; | ^~~~ rlink.cpp: In function ‘GBitVec traverse_dfs(int, int, CGraphnode*, CGraphnode*, GBitVec, int, GVec&, GPVec**, GPVec**, int&, GIntHash**, int&)’: rlink.cpp:2461:25: note: ‘childparents’ declared here 2461 | GBitVec childparents=parents; | ^~~~~~~~~~~~ i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c tablemaker.cpp -o tablemaker.o In file included from rlink.h:5, from tablemaker.cpp:2: ./gclib/gff.h:242:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 242 | struct { | ^ ./gclib/gff.h:245:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 245 | struct { | ^ ./gclib/gff.h:343:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 343 | struct { | ^ ./gclib/gff.h:706:14: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 706 | struct { | ^ ./gclib/gff.h:1165:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 1165 | struct { | ^ In file included from rlink.h:6: ./gclib/GSam.h:32:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 32 | struct { | ^ tablemaker.cpp: In function ‘void rc_update_exons(RC_BundleData&)’: tablemaker.cpp:205:29: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 205 | bind2nd( minus(), avg)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/i686-linux-gnu/include/c++/13/bits/stl_function.h:1438, from /usr/i686-linux-gnu/include/c++/13/functional:49, from ./gclib/khashl.hh:25, from ./gclib/GHashMap.hh:8, from ./gclib/GFastaIndex.h:11, from ./gclib/GFaSeqGet.h:3, from ./gclib/gff.h:9: /usr/i686-linux-gnu/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ tablemaker.cpp:212:29: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = minus; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 212 | bind2nd( minus(), mavg)); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/i686-linux-gnu/include/c++/13/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/i686-linux-gnu/include/c++/13/algorithm:60, from ./gclib/GVec.hh:10, from ./gclib/GList.hh:8, from ./gclib/GFastaIndex.h:12: In static member function ‘static _Up* std::__copy_move<_IsMove, true, std::random_access_iterator_tag>::__copy_m(_Tp*, _Tp*, _Up*) [with _Tp = unsigned int; _Up = unsigned int; bool _IsMove = true]’, inlined from ‘_OI std::__copy_move_a2(_II, _II, _OI) [with bool _IsMove = true; _II = unsigned int*; _OI = unsigned int*]’ at /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:506:30, inlined from ‘_OI std::__copy_move_a1(_II, _II, _OI) [with bool _IsMove = true; _II = unsigned int*; _OI = unsigned int*]’ at /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:533:42, inlined from ‘_OI std::__copy_move_a(_II, _II, _OI) [with bool _IsMove = true; _II = unsigned int*; _OI = unsigned int*]’ at /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:540:31, inlined from ‘_OI std::move(_II, _II, _OI) [with _II = unsigned int*; _OI = unsigned int*]’ at /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:665:38, inlined from ‘void GVec::setCapacity(int) [with OBJ = unsigned int]’ at ./gclib/GVec.hh:109:18, inlined from ‘void GVec::Grow() [with OBJ = unsigned int]’ at ./gclib/GVec.hh:323:13, inlined from ‘int GVec::Add(OBJ*) [with OBJ = unsigned int]’ at ./gclib/GVec.hh:370:29, inlined from ‘int GVec::Add(OBJ&) [with OBJ = unsigned int]’ at ./gclib/GVec.hh:59:36, inlined from ‘RC_Feature::RC_Feature(int, int, char, uint, uint)’ at tablemaker.h:53:22, inlined from ‘void RC_TData::addFeature(int, int, GPVec&, uint&, GList&, GPVec&, int&)’ at tablemaker.cpp:309:73: /usr/i686-linux-gnu/include/c++/13/bits/stl_algobase.h:437:30: warning: ‘void* __builtin_memcpy(void*, const void*, unsigned int)’ forming offset 4 is out of the bounds [0, 4] [-Warray-bounds=] 437 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c tmerge.cpp -o tmerge.o In file included from rlink.h:5, from tmerge.h:5, from tmerge.cpp:1: ./gclib/gff.h:242:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 242 | struct { | ^ ./gclib/gff.h:245:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 245 | struct { | ^ ./gclib/gff.h:343:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 343 | struct { | ^ ./gclib/gff.h:706:14: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 706 | struct { | ^ ./gclib/gff.h:1165:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 1165 | struct { | ^ In file included from rlink.h:6: ./gclib/GSam.h:32:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 32 | struct { | ^ i686-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -pedantic -I/usr/include/bamtools/api/ -DDEBUG -D_DEBUG -DGDEBUG -Wall -Wextra -I. -I./gclib -I/usr/include/samtools -I/usr/include/htslib -fsigned-char -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -std=c++11 -fno-strict-aliasing -fno-exceptions -fno-rtti -Wno-implicit-fallthrough -Wno-class-memaccess -pthread -c stringtie.cpp -o stringtie.o In file included from rlink.h:5, from stringtie.cpp:2: ./gclib/gff.h:242:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 242 | struct { | ^ ./gclib/gff.h:245:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 245 | struct { | ^ ./gclib/gff.h:343:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 343 | struct { | ^ ./gclib/gff.h:706:14: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 706 | struct { | ^ ./gclib/gff.h:1165:12: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 1165 | struct { | ^ In file included from rlink.h:6: ./gclib/GSam.h:32:16: warning: ISO C++ prohibits anonymous structs [-Wpedantic] 32 | struct { | ^ stringtie.cpp: In function ‘int main(int, char**)’: stringtie.cpp:468:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘unsigned int’} [-Wsign-compare] 468 | if (tstackSize>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp dh_prep -a rm -f -- debian/stringtie.substvars rm -fr -- debian/.debhelper/generated/stringtie/ debian/stringtie/ debian/tmp/ dh_auto_install --destdir=debian/stringtie/ -a install -m0755 -d /<>/stringtie-2.2.1\+ds/debian/stringtie rm -f debian/stringtie.debhelper.log debian/rules override_dh_install make[1]: Entering directory '/<>' dh_install prepDE.py3 usr/bin install -m0755 -d debian/stringtie/usr/bin cp --reflink=auto -a ./prepDE.py3 ./stringtie debian/stringtie/usr/bin/ mv debian/stringtie/usr/bin/prepDE.py3 debian/stringtie/usr/bin/prepDE.py make[1]: Leaving directory '/<>' dh_installdocs -a install -m0755 -d debian/stringtie/usr/share/doc/stringtie install -p -m0644 debian/copyright debian/stringtie/usr/share/doc/stringtie/copyright dh_installchangelogs -a install -m0755 -d debian/stringtie/usr/share/doc/stringtie install -p -m0644 debian/.debhelper/generated/stringtie/dh_installchangelogs.dch.trimmed debian/stringtie/usr/share/doc/stringtie/changelog.Debian dh_installman -a install -m0755 -d debian/stringtie/usr/share/man/man1/ install -p -m0644 ./debian/stringtie.1 debian/stringtie/usr/share/man/man1/stringtie.1 man-recode --to-code UTF-8 --suffix .dh-new debian/stringtie/usr/share/man/man1/stringtie.1 mv debian/stringtie/usr/share/man/man1/stringtie.1.dh-new debian/stringtie/usr/share/man/man1/stringtie.1 chmod 0644 -- debian/stringtie/usr/share/man/man1/stringtie.1 dh_lintian -a install -m0755 -d debian/stringtie/usr/share/lintian/overrides install -p -m0644 debian/lintian-overrides debian/stringtie/usr/share/lintian/overrides/stringtie dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/stringtie chmod a-x usr/share/doc/stringtie/changelog.Debian usr/share/man/man1/stringtie.1 gzip -9nf usr/share/doc/stringtie/changelog.Debian usr/share/man/man1/stringtie.1 cd '/<>' dh_fixperms -a find debian/stringtie ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/stringtie/usr/share/doc -type f -a -true -a ! -regex 'debian/stringtie/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/stringtie/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/stringtie/usr/share/man debian/stringtie/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/stringtie -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/stringtie/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_dwz -a dwz -- debian/stringtie/usr/bin/stringtie dh_strip -a install -m0755 -d debian/.debhelper/stringtie/dbgsym-root/usr/lib/debug/.build-id/08 i686-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/stringtie/usr/bin/stringtie debian/.debhelper/stringtie/dbgsym-root/usr/lib/debug/.build-id/08/e5e8142833fedf685eee82e3205ee7e507e78c.debug chmod 0644 -- debian/.debhelper/stringtie/dbgsym-root/usr/lib/debug/.build-id/08/e5e8142833fedf685eee82e3205ee7e507e78c.debug i686-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/stringtie/usr/bin/stringtie i686-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/stringtie/dbgsym-root/usr/lib/debug/.build-id/08/e5e8142833fedf685eee82e3205ee7e507e78c.debug debian/stringtie/usr/bin/stringtie install -m0755 -d debian/.debhelper/stringtie/dbgsym-root/usr/share/doc ln -s stringtie debian/.debhelper/stringtie/dbgsym-root/usr/share/doc/stringtie-dbgsym install -m0755 -d debian/.debhelper/stringtie dh_makeshlibs -a rm -f debian/stringtie/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/stringtie/DEBIAN dpkg-shlibdeps -Tdebian/stringtie.substvars debian/stringtie/usr/bin/stringtie dh_installdeb -a install -m0755 -d debian/stringtie/DEBIAN dh_gencontrol -a install -m0755 -d debian/stringtie/DEBIAN echo misc:Depends= >> debian/stringtie.substvars echo misc:Pre-Depends= >> debian/stringtie.substvars install -m0755 -d debian/.debhelper/stringtie/dbgsym-root/DEBIAN dpkg-gencontrol -pstringtie -ldebian/changelog -Tdebian/stringtie.substvars -cdebian/control -Pdebian/.debhelper/stringtie/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=stringtie-dbgsym "-DDepends=stringtie (= \${binary:Version})" "-DDescription=debug symbols for stringtie" -DBuild-Ids=08e5e8142833fedf685eee82e3205ee7e507e78c -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/stringtie/dbgsym-root/DEBIAN/control dpkg-gencontrol -pstringtie -ldebian/changelog -Tdebian/stringtie.substvars -cdebian/control -Pdebian/stringtie chmod 0644 -- debian/stringtie/DEBIAN/control dh_md5sums -a install -m0755 -d debian/stringtie/DEBIAN cd debian/stringtie >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/stringtie/DEBIAN/md5sums install -m0755 -d debian/.debhelper/stringtie/dbgsym-root/DEBIAN cd debian/.debhelper/stringtie/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/stringtie/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --root-owner-group --build debian/stringtie .. dpkg-deb: building package 'stringtie' in '../stringtie_2.2.1+ds-3_i386.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/stringtie/dbgsym-root .. dpkg-deb: building package 'stringtie-dbgsym' in '../stringtie-dbgsym_2.2.1+ds-3_i386.deb'. dpkg-genbuildinfo --build=any -O../stringtie_2.2.1+ds-3_i386.buildinfo dpkg-genchanges --build=any -O../stringtie_2.2.1+ds-3_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-04-26T02:46:13Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ stringtie_2.2.1+ds-3_i386.changes: ---------------------------------- Format: 1.8 Date: Fri, 26 Jan 2024 21:34:48 +0100 Source: stringtie Binary: stringtie stringtie-dbgsym Built-For-Profiles: cross nocheck Architecture: i386 Version: 2.2.1+ds-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: stringtie - assemble short RNAseq reads to transcripts Closes: 1061576 Changes: stringtie (2.2.1+ds-3) unstable; urgency=medium . * Team upload. * Add prepDE.py3 (renamed to prepDE.py) to /usr/bin Closes: #1061576 * Depends: python3 * Lintian-overrides: script-with-language-extension * Standards-Version: 4.6.2 (routine-update) Checksums-Sha1: ec59c760aeaa71bcb369be941bbf21e7c90698f2 1933432 stringtie-dbgsym_2.2.1+ds-3_i386.deb 7609269c2566c50d5d8120de75177c472ffb034c 6257 stringtie_2.2.1+ds-3_i386.buildinfo a2a057ca0e6f641e3f98d315d1a7b29d3142f5ea 443428 stringtie_2.2.1+ds-3_i386.deb Checksums-Sha256: 9077d80023e5a0a84ad452cfcca5c7417f76dd56f941520b7c89ed5a7707d01a 1933432 stringtie-dbgsym_2.2.1+ds-3_i386.deb 7d3c6d04cfaef6e6dca2811d6502ba6ca1349c6fe70610794e89fbe725dafd56 6257 stringtie_2.2.1+ds-3_i386.buildinfo d223386c531e2c248e0704777cee0e4168385b9f4ef7e215c60b66777391ba40 443428 stringtie_2.2.1+ds-3_i386.deb Files: dbfc0b285955aa314f8778b7c458b8e3 1933432 debug optional stringtie-dbgsym_2.2.1+ds-3_i386.deb ef1eb36068d568bbf29d497641a50baf 6257 science optional stringtie_2.2.1+ds-3_i386.buildinfo 7da734832dd3ea1516659adf95c99bbe 443428 science optional stringtie_2.2.1+ds-3_i386.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: stringtie Binary: stringtie stringtie-dbgsym Architecture: i386 Version: 2.2.1+ds-3 Checksums-Md5: dbfc0b285955aa314f8778b7c458b8e3 1933432 stringtie-dbgsym_2.2.1+ds-3_i386.deb 7da734832dd3ea1516659adf95c99bbe 443428 stringtie_2.2.1+ds-3_i386.deb Checksums-Sha1: ec59c760aeaa71bcb369be941bbf21e7c90698f2 1933432 stringtie-dbgsym_2.2.1+ds-3_i386.deb a2a057ca0e6f641e3f98d315d1a7b29d3142f5ea 443428 stringtie_2.2.1+ds-3_i386.deb Checksums-Sha256: 9077d80023e5a0a84ad452cfcca5c7417f76dd56f941520b7c89ed5a7707d01a 1933432 stringtie-dbgsym_2.2.1+ds-3_i386.deb d223386c531e2c248e0704777cee0e4168385b9f4ef7e215c60b66777391ba40 443428 stringtie_2.2.1+ds-3_i386.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Fri, 26 Apr 2024 02:46:12 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13.1), base-passwd (= 3.6.3), bash (= 5.2.21-2), binutils (= 2.42-4), binutils-aarch64-linux-gnu (= 2.42-4), binutils-common (= 2.42-4), bsdextrautils (= 2.40-6), bsdutils (= 1:2.40-6), build-essential (= 12.10), bzip2 (= 1.0.8-5.1), coreutils (= 9.4-3.1), cpp (= 4:13.2.0-7), cpp-13 (= 13.2.0-23), cpp-13-aarch64-linux-gnu (= 13.2.0-23), cpp-aarch64-linux-gnu (= 4:13.2.0-7), dash (= 0.5.12-6), debconf (= 1.5.86), debhelper (= 13.15.3), debianutils (= 5.17), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.6), dpkg-dev (= 1.22.6), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.9.0-5), g++ (= 4:13.2.0-7), g++-13 (= 13.2.0-23), g++-13-aarch64-linux-gnu (= 13.2.0-23), g++-aarch64-linux-gnu (= 4:13.2.0-7), gcc (= 4:13.2.0-7), gcc-13 (= 13.2.0-23), gcc-13-aarch64-linux-gnu (= 13.2.0-23), gcc-13-base (= 13.2.0-23), gcc-14-base (= 14-20240330-1), gcc-aarch64-linux-gnu (= 4:13.2.0-7), gettext (= 0.21-14+b1), gettext-base (= 0.21-14+b1), grep (= 3.11-4), groff-base (= 1.23.0-3+b1), gzip (= 1.12-1.1), help2man (= 1.49.3), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14-20240330-1), libatomic1 (= 14-20240330-1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-2.1), libaudit1 (= 1:3.1.2-2.1), libbam-dev (= 0.1.19+dfsg-6), libbinutils (= 2.42-4), libblkid1 (= 2.40-6), libbrotli1 (= 1.1.0-2+b3), libbz2-1.0 (= 1.0.8-5.1), libbz2-dev (= 1.0.8-5.1), libc-bin (= 2.37-18), libc-dev-bin (= 2.37-18), libc6 (= 2.37-18), libc6-dev (= 2.37-18), libcap-ng0 (= 0.8.5-1), libcap2 (= 1:2.66-5), libcc1-0 (= 14-20240330-1), libcom-err2 (= 1.47.0-2.4), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.42-4), libctf0 (= 2.42-4), libcurl3t64-gnutls (= 8.7.1-3), libcurl4-gnutls-dev (= 8.7.1-3), libdb5.3t64 (= 5.3.28+dfsg2-7), libdebconfclient0 (= 0.271+b3), libdebhelper-perl (= 13.15.3), libdeflate-dev (= 1.20-1), libdeflate0 (= 1.20-1), libdpkg-perl (= 1.22.6), libelf1t64 (= 0.191-1+b1), libffi8 (= 3.4.6-1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-13-dev (= 13.2.0-23), libgcc-s1 (= 14-20240330-1), libgcrypt20 (= 1.10.3-2), libgdbm-compat4t64 (= 1.23-5.1+b1), libgdbm6t64 (= 1.23-5.1+b1), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgnutls30t64 (= 3.8.5-2), libgomp1 (= 14-20240330-1), libgpg-error0 (= 1.47-3), libgprofng0 (= 2.42-4), libgssapi-krb5-2 (= 1.20.1-6+b1), libhogweed6t64 (= 3.9.1-2.2), libhts-dev (= 1.19+ds-1.1+b1), libhts3t64 (= 1.19+ds-1.1+b1), libhtscodecs2 (= 1.6.0-1+b1), libhwasan0 (= 14-20240330-1), libicu72 (= 72.1-4+b1), libidn2-0 (= 2.3.7-2), libisl23 (= 0.26-3+b2), libitm1 (= 14-20240330-1), libjansson4 (= 2.14-2+b2), libk5crypto3 (= 1.20.1-6+b1), libkeyutils1 (= 1.6.3-3), libkrb5-3 (= 1.20.1-6+b1), libkrb5support0 (= 1.20.1-6+b1), libldap-2.5-0 (= 2.5.16+dfsg-2), liblocale-gettext-perl (= 1.07-7), liblsan0 (= 14-20240330-1), liblz4-1 (= 1.9.4-2), liblzma-dev (= 5.6.1+really5.4.5-1), liblzma5 (= 5.6.1+really5.4.5-1), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40-6), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libnettle8t64 (= 3.9.1-2.2), libnghttp2-14 (= 1.61.0-1+b1), libnumber-compare-perl (= 0.03-3), libp11-kit0 (= 0.25.3-4), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpcre2-8-0 (= 10.42-4+b1), libperl5.38t64 (= 5.38.2-3.2+b2), libpipeline1 (= 1.5.7-2), libpsl5t64 (= 0.21.2-1.1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b4), libsasl2-2 (= 2.1.28+dfsg1-6), libsasl2-modules-db (= 2.1.28+dfsg1-6), libseccomp2 (= 2.5.5-1), libselinux1 (= 3.5-2+b2), libsframe1 (= 2.42-4), libsmartcols1 (= 2.40-6), libssh2-1t64 (= 1.11.0-4.1+b2), libssl3t64 (= 3.2.1-3), libstdc++-13-dev (= 13.2.0-23), libstdc++6 (= 14-20240330-1), libsub-override-perl (= 0.10-1), libsystemd0 (= 255.5-1), libtasn1-6 (= 4.19.0-3+b2), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20240414-1), libtool (= 2.4.7-7), libtsan2 (= 14-20240330-1), libubsan1 (= 14-20240330-1), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 255.5-1), libunistring5 (= 1.2-1), libuuid1 (= 2.40-6), libxml2 (= 2.9.14+dfsg-1.3+b2), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.7.12-1), login (= 1:4.13+dfsg1-4), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.1-1), mawk (= 1.3.4.20240123-1), ncurses-base (= 6.4+20240414-1), ncurses-bin (= 6.4+20240414-1), patch (= 2.7.6-7), perl (= 5.38.2-3.2+b2), perl-base (= 5.38.2-3.2+b2), perl-modules-5.38 (= 5.38.2-3.2), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.22), sysvinit-utils (= 3.09-1), tar (= 1.35+dfsg-3), usrmerge (= 39), util-linux (= 2.40-6), xz-utils (= 5.6.1+really5.4.5-1), zlib1g (= 1:1.3.dfsg-3.1), zlib1g-dev (= 1:1.3.dfsg-3.1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1706301288" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ stringtie-dbgsym_2.2.1+ds-3_i386.deb ------------------------------------ new Debian package, version 2.0. size 1933432 bytes: control archive=536 bytes. 384 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: stringtie-dbgsym Source: stringtie Version: 2.2.1+ds-3 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 1953 Depends: stringtie (= 2.2.1+ds-3) Section: debug Priority: optional Description: debug symbols for stringtie Build-Ids: 08e5e8142833fedf685eee82e3205ee7e507e78c drwxr-xr-x root/root 0 2024-01-26 20:34 ./ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/lib/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/lib/debug/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/lib/debug/.build-id/08/ -rw-r--r-- root/root 1988648 2024-01-26 20:34 ./usr/lib/debug/.build-id/08/e5e8142833fedf685eee82e3205ee7e507e78c.debug drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/doc/ lrwxrwxrwx root/root 0 2024-01-26 20:34 ./usr/share/doc/stringtie-dbgsym -> stringtie stringtie_2.2.1+ds-3_i386.deb ----------------------------- new Debian package, version 2.0. size 443428 bytes: control archive=1040 bytes. 952 bytes, 22 lines control 390 bytes, 6 lines md5sums Package: stringtie Version: 2.2.1+ds-3 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 1283 Depends: libc6 (>= 2.34), libgcc-s1 (>= 3.4), libhts3t64 (>= 1.17), libstdc++6 (>= 4.1.1), python3 Recommends: stringtie-examples Suggests: cufflinks Section: science Priority: optional Homepage: https://ccb.jhu.edu/software/stringtie/ Description: assemble short RNAseq reads to transcripts The abundance of transcripts in a human tissue sample can be determined by RNA sequencing. The exact sequence sampled may be random, depending on the technology used. And it may be short, i.e. shorter than the transcript. At some point, many shorter reads need to be assembled to the model the complete transcripts. . StringTie knows how to assemble of RNA-Seq into potential transcripts without the need of a reference genome and provides a quantification also of the splice variants. drwxr-xr-x root/root 0 2024-01-26 20:34 ./ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/bin/ -rwxr-xr-x root/root 12058 2022-01-26 20:29 ./usr/bin/prepDE.py -rwxr-xr-x root/root 1271324 2024-01-26 20:34 ./usr/bin/stringtie drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/doc/stringtie/ -rw-r--r-- root/root 1786 2024-01-26 20:34 ./usr/share/doc/stringtie/changelog.Debian.gz -rw-r--r-- root/root 12387 2024-01-26 20:34 ./usr/share/doc/stringtie/copyright drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/lintian/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 106 2024-01-26 20:34 ./usr/share/lintian/overrides/stringtie drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/man/ drwxr-xr-x root/root 0 2024-01-26 20:34 ./usr/share/man/man1/ -rw-r--r-- root/root 1884 2024-01-26 20:34 ./usr/share/man/man1/stringtie.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1339 B] Get:5 copy:/<>/apt_archive ./ Packages [1416 B] Fetched 3370 B in 0s (185 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:i386 t1utils unzip 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 13.4 MB of archives. After this operation, 53.5 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [844 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.2-4 [69.3 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.2.1-3 [1324 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20240203 [158 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.66-1 [31.6 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libassuan0 arm64 2.5.6-1 [47.3 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.2.40-3 [558 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.45.3-1 [837 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.2.40-3 [903 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.16.0-1 [2936 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.40+b5 [63.8 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b1 [10.6 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.008-2+b2 [15.2 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b3 [22.3 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.64-1 [43.5 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.64-2+b3 [120 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.28-1 [98.6 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.82-1 [96.9 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.64-1 [217 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b3 [35.2 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.46-1+b2 [13.6 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3 [23.4 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.37-1+b2 [127 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.59-1 [43.6 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-1+b3 [31.2 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b3 [97.6 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.83-2+b3 [24.1 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b3 [28.3 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 6.45-1 [82.0 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get:73 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.94-1+b1 [328 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.085-1 [218 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.77-1 [183 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.14-1 [37.7 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-2+b1 [49.2 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2+b1 [33.2 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:96 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.5.10-1+b5 [141 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-3+b2 [11.2 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.27-1+b2 [12.3 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:101 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b3 [17.4 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1+b2 [11.4 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.636-1+b2 [41.6 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.004+ds-1+b2 [95.4 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.004+ds-1+b2 [97.6 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:109 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.39-1+b2 [56.3 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.29-2 [26.6 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b3 [24.4 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b3 [8680 B] Get:113 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.16-1+b2 [13.1 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-2 [171 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.44-2+b3 [72.2 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.62-2+b2 [19.9 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.18-1 [114 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1 [50.4 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.89+ds-1+b1 [33.2 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.11-1 [58.8 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-28 [157 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.117.0 [1052 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.4 MB in 0s (50.0 MB/s) Selecting previously unselected package netbase. (Reading database ... 17568 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.2.1-3_arm64.deb ... Unpacking openssl (3.2.1-3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.66-1_arm64.deb ... Unpacking diffstat (1.66-1) ... Selecting previously unselected package libassuan0:arm64. Preparing to unpack .../005-libassuan0_2.5.6-1_arm64.deb ... Unpacking libassuan0:arm64 (2.5.6-1) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../006-libreadline8t64_8.2-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package gpgconf. Preparing to unpack .../007-gpgconf_2.2.40-3_arm64.deb ... Unpacking gpgconf (2.2.40-3) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../008-libsqlite3-0_3.45.3-1_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.45.3-1) ... 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Unpacking libdynaloader-functions-perl (0.003-3) ... Selecting previously unselected package libdevel-callchecker-perl:arm64. Preparing to unpack .../015-libdevel-callchecker-perl_0.008-2+b2_arm64.deb ... Unpacking libdevel-callchecker-perl:arm64 (0.008-2+b2) ... Selecting previously unselected package libparams-classify-perl:arm64. Preparing to unpack .../016-libparams-classify-perl_0.015-2+b3_arm64.deb ... Unpacking libparams-classify-perl:arm64 (0.015-2+b3) ... Selecting previously unselected package libmodule-runtime-perl. Preparing to unpack .../017-libmodule-runtime-perl_0.016-2_all.deb ... Unpacking libmodule-runtime-perl (0.016-2) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../018-libtry-tiny-perl_0.31-2_all.deb ... Unpacking libtry-tiny-perl (0.31-2) ... Selecting previously unselected package libmodule-implementation-perl. Preparing to unpack .../019-libmodule-implementation-perl_0.09-2_all.deb ... 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Setting up libterm-readkey-perl (2.38-2+b3) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.2.1-3) ... Setting up libtext-levenshteinxs-perl (0.03-5+b3) ... Setting up libperlio-gzip-perl (0.20-1+b3) ... Setting up readline-common (8.2-4) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b2) ... Setting up libmarkdown2:arm64 (2.2.7-2+b1) ... Setting up liburi-perl (5.28-1) ... Setting up iso-codes (4.16.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b3) ... Setting up libnet-ssleay-perl:arm64 (1.94-1+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1+b2) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.008-2+b2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:arm64 (3.82-1) ... Setting up gpgconf (2.2.40-3) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up gpg (2.2.40-3) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:arm64 (0.015-2+b3) ... Setting up libcgi-pm-perl (4.64-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.59-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.77-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.18-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up lintian (2.117.0) ... Setting up sbuild-build-depends-lintian-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.37-18) ... Processing triggers for man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 38752 Build-Time: 243 Distribution: unstable Foreign Architectures: i386 Host Architecture: i386 Install-Time: 50 Job: stringtie_2.2.1+ds-3 Lintian: pass Machine Architecture: arm64 Package: stringtie Package-Time: 341 Source-Version: 2.2.1+ds-3 Space: 38752 Status: successful Version: 2.2.1+ds-3 -------------------------------------------------------------------------------- Finished at 2024-04-26T02:46:13Z Build needed 00:05:41, 38752k disk space