sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | tracetuner 3.0.6~beta+dfsg-3 (arm64) Thu, 09 Nov 2023 14:12:04 +0000 | +==============================================================================+ Package: tracetuner Version: 3.0.6~beta+dfsg-3 Source Version: 3.0.6~beta+dfsg-3 Distribution: unstable Machine Architecture: amd64 Host Architecture: arm64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-22b985ca-1c85-4108-9f3b-234208ea5b46' with '<>' I: NOTICE: Log filtering will replace 'build/tracetuner-Syclqk/resolver-kmA7R5' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [198 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-11-09-0803.42-F-2023-11-09-0203.46.pdiff [19.7 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-11-09-0803.42-F-2023-11-09-0203.46.pdiff [17.0 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-11-09-0803.42-F-2023-11-09-0203.46.pdiff [19.7 kB] Get:6 http://localhost:3142/debian sid/main arm64 Packages [9462 kB] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-11-09-0803.42-F-2023-11-09-0203.46.pdiff [17.0 kB] Fetched 9824 kB in 3s (3771 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libssl3 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2017 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://localhost:3142/debian sid/main amd64 libssl3 amd64 3.0.12-2 [2017 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 2017 kB in 0s (121 MB/s) (Reading database ... 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Processing triggers for libc-bin (2.37-12) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'tracetuner' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/tracetuner.git Please use: git clone https://salsa.debian.org/med-team/tracetuner.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 395 kB of source archives. Get:1 http://localhost:3142/debian sid/main tracetuner 3.0.6~beta+dfsg-3 (dsc) [2054 B] Get:2 http://localhost:3142/debian sid/main tracetuner 3.0.6~beta+dfsg-3 (tar) [385 kB] Get:3 http://localhost:3142/debian sid/main tracetuner 3.0.6~beta+dfsg-3 (diff) [7920 B] Fetched 395 kB in 1s (367 kB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/tracetuner-Syclqk/tracetuner-3.0.6~beta+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/tracetuner-Syclqk' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-arm64:amd64, libc-dev:arm64, libstdc++-dev:arm64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [726 B] Get:5 copy:/<>/apt_archive ./ Packages [769 B] Fetched 2104 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-11-base:arm64 gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-base:arm64 gcc-13-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu72 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libnsl-dev:arm64 libnsl2:arm64 libpipeline1 libssl3:arm64 libstdc++-11-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-aarch64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:arm64 libc-l10n:arm64 locales:arm64 libnss-nis:arm64 libnss-nisplus:arm64 manpages-dev:arm64 krb5-doc:arm64 krb5-user:arm64 libstdc++-11-doc:arm64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:arm64 libarchive-cpio-perl krb5-locales:arm64 libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-aarch64-linux-gnu bsdextrautils cpp-13-aarch64-linux-gnu cpp-aarch64-linux-gnu cross-config crossbuild-essential-arm64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-13-aarch64-linux-gnu g++-aarch64-linux-gnu gcc-11-base:arm64 gcc-13-aarch64-linux-gnu gcc-13-aarch64-linux-gnu-base gcc-13-base:arm64 gcc-13-cross-base gcc-aarch64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan6:arm64 libasan8-arm64-cross libatomic1:arm64 libatomic1-arm64-cross libc6:arm64 libc6-arm64-cross libc6-dev:arm64 libc6-dev-arm64-cross libcom-err2:arm64 libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:arm64 libcrypt1:arm64 libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:arm64 libgcc-13-dev-arm64-cross libgcc-s1:arm64 libgcc-s1-arm64-cross libgomp1:arm64 libgomp1-arm64-cross libgssapi-krb5-2:arm64 libhwasan0:arm64 libhwasan0-arm64-cross libicu72 libio-string-perl libitm1:arm64 libitm1-arm64-cross libk5crypto3:arm64 libkeyutils1:arm64 libkrb5-3:arm64 libkrb5support0:arm64 liblocale-gettext-perl liblsan0:arm64 liblsan0-arm64-cross libmagic-mgc libmagic1 libnsl-dev:arm64 libnsl2:arm64 libpipeline1 libssl3:arm64 libstdc++-11-dev:arm64 libstdc++-13-dev-arm64-cross libstdc++6:arm64 libstdc++6-arm64-cross libsub-override-perl libtirpc-dev:arm64 libtirpc3:arm64 libtool libtsan0:arm64 libtsan2-arm64-cross libubsan1:arm64 libubsan1-arm64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:arm64 linux-libc-dev-arm64-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:arm64 sensible-utils ucf zlib1g:arm64 zlib1g-dev:arm64 0 upgraded, 104 newly installed, 0 to remove and 0 not upgraded. Need to get 101 MB of archives. After this operation, 417 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [920 B] Get:2 http://localhost:3142/debian sid/main amd64 liblocale-gettext-perl amd64 1.07-6 [15.3 kB] Get:3 http://localhost:3142/debian sid/main amd64 sensible-utils all 0.0.20 [19.3 kB] Get:4 http://localhost:3142/debian sid/main amd64 libmagic-mgc amd64 1:5.45-2 [314 kB] Get:5 http://localhost:3142/debian sid/main amd64 libmagic1 amd64 1:5.45-2 [105 kB] Get:6 http://localhost:3142/debian sid/main amd64 file amd64 1:5.45-2 [42.8 kB] Get:7 http://localhost:3142/debian sid/main amd64 gettext-base amd64 0.21-13+b1 [161 kB] Get:8 http://localhost:3142/debian sid/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:9 http://localhost:3142/debian sid/main amd64 groff-base amd64 1.23.0-3 [1180 kB] Get:10 http://localhost:3142/debian sid/main amd64 bsdextrautils amd64 2.39.2-5 [89.1 kB] Get:11 http://localhost:3142/debian sid/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB] Get:12 http://localhost:3142/debian sid/main amd64 man-db amd64 2.12.0-1 [1402 kB] Get:13 http://localhost:3142/debian sid/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://localhost:3142/debian sid/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:15 http://localhost:3142/debian sid/main amd64 autoconf all 2.71-3 [332 kB] Get:16 http://localhost:3142/debian sid/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://localhost:3142/debian sid/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://localhost:3142/debian sid/main amd64 autopoint all 0.21-13 [496 kB] Get:19 http://localhost:3142/debian sid/main amd64 binutils-aarch64-linux-gnu amd64 2.41-6 [3380 kB] Get:20 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu-base amd64 13.2.0-6cross1 [40.8 kB] Get:21 http://localhost:3142/debian sid/main amd64 cpp-13-aarch64-linux-gnu amd64 13.2.0-6cross1 [9775 kB] Get:22 http://localhost:3142/debian sid/main amd64 cpp-aarch64-linux-gnu amd64 4:13.2.0-1 [4120 B] Get:23 http://localhost:3142/debian sid/main amd64 cross-config all 2.6.20 [16.3 kB] Get:24 http://localhost:3142/debian sid/main amd64 gcc-13-cross-base all 13.2.0-6cross1 [36.3 kB] Get:25 http://localhost:3142/debian sid/main amd64 libc6-arm64-cross all 2.37-12cross1 [1006 kB] Get:26 http://localhost:3142/debian sid/main amd64 libgcc-s1-arm64-cross all 13.2.0-6cross1 [40.8 kB] Get:27 http://localhost:3142/debian sid/main amd64 libgomp1-arm64-cross all 13.2.0-6cross1 [112 kB] Get:28 http://localhost:3142/debian sid/main amd64 libitm1-arm64-cross all 13.2.0-6cross1 [23.3 kB] Get:29 http://localhost:3142/debian sid/main amd64 libatomic1-arm64-cross all 13.2.0-6cross1 [9908 B] Get:30 http://localhost:3142/debian sid/main amd64 libasan8-arm64-cross all 13.2.0-6cross1 [2406 kB] Get:31 http://localhost:3142/debian sid/main amd64 liblsan0-arm64-cross all 13.2.0-6cross1 [1068 kB] Get:32 http://localhost:3142/debian sid/main amd64 libtsan2-arm64-cross all 13.2.0-6cross1 [2279 kB] Get:33 http://localhost:3142/debian sid/main amd64 libstdc++6-arm64-cross all 13.2.0-6cross1 [575 kB] Get:34 http://localhost:3142/debian sid/main amd64 libubsan1-arm64-cross all 13.2.0-6cross1 [980 kB] Get:35 http://localhost:3142/debian sid/main amd64 libhwasan0-arm64-cross all 13.2.0-6cross1 [1119 kB] Get:36 http://localhost:3142/debian sid/main amd64 libgcc-13-dev-arm64-cross all 13.2.0-6cross1 [2232 kB] Get:37 http://localhost:3142/debian sid/main amd64 gcc-13-aarch64-linux-gnu amd64 13.2.0-6cross1 [19.2 MB] Get:38 http://localhost:3142/debian sid/main amd64 gcc-aarch64-linux-gnu amd64 4:13.2.0-1 [1468 B] Get:39 http://localhost:3142/debian sid/main amd64 linux-libc-dev-arm64-cross all 6.5.8-1cross1 [1990 kB] Get:40 http://localhost:3142/debian sid/main amd64 libc6-dev-arm64-cross all 2.37-12cross1 [1427 kB] Get:41 http://localhost:3142/debian sid/main amd64 libstdc++-13-dev-arm64-cross all 13.2.0-6cross1 [2134 kB] Get:42 http://localhost:3142/debian sid/main amd64 g++-13-aarch64-linux-gnu amd64 13.2.0-6cross1 [10.7 MB] Get:43 http://localhost:3142/debian sid/main amd64 g++-aarch64-linux-gnu amd64 4:13.2.0-1 [1172 B] Get:44 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:45 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:46 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-4 [9396 kB] Get:47 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.3 [686 kB] Get:48 http://localhost:3142/debian sid/main amd64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:49 http://localhost:3142/debian sid/main amd64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:50 http://localhost:3142/debian sid/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:51 http://localhost:3142/debian sid/main amd64 libxml-libxml-perl amd64 2.0207+dfsg+really+2.0134-1+b1 [322 kB] Get:52 http://localhost:3142/debian sid/main amd64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:53 http://localhost:3142/debian sid/main amd64 libyaml-perl all 1.30-2 [63.4 kB] Get:54 http://localhost:3142/debian sid/main amd64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libfile-which-perl all 1.27-2 [15.1 kB] Get:56 http://localhost:3142/debian sid/main amd64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:58 http://localhost:3142/debian sid/main amd64 dpkg-cross all 2.6.20 [25.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 crossbuild-essential-arm64 all 12.10 [3484 B] Get:60 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.7 [82.1 kB] Get:61 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-7 [517 kB] Get:62 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:63 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:64 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:65 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:66 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:67 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.189-4 [174 kB] Get:68 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:69 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-13+b1 [1301 kB] Get:70 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:71 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:72 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.7 [956 kB] Get:73 http://localhost:3142/debian sid/main arm64 gcc-11-base arm64 11.4.0-5 [40.1 kB] Get:74 http://localhost:3142/debian sid/main arm64 gcc-13-base arm64 13.2.0-6 [40.5 kB] Get:75 http://localhost:3142/debian sid/main arm64 libgcc-s1 arm64 13.2.0-6 [40.8 kB] Get:76 http://localhost:3142/debian sid/main arm64 libc6 arm64 2.37-12 [2325 kB] Get:77 http://localhost:3142/debian sid/main arm64 libasan6 arm64 11.4.0-5 [1951 kB] Get:78 http://localhost:3142/debian sid/main arm64 libatomic1 arm64 13.2.0-6 [10.2 kB] Get:79 http://localhost:3142/debian sid/main arm64 linux-libc-dev arm64 6.5.10-1 [1992 kB] Get:80 http://localhost:3142/debian sid/main arm64 libcrypt1 arm64 1:4.4.36-2 [90.3 kB] Get:81 http://localhost:3142/debian sid/main arm64 libcrypt-dev arm64 1:4.4.36-2 [121 kB] Get:82 http://localhost:3142/debian sid/main arm64 libkrb5support0 arm64 1.20.1-5 [32.5 kB] Get:83 http://localhost:3142/debian sid/main arm64 libcom-err2 arm64 1.47.0-2+b1 [19.9 kB] Get:84 http://localhost:3142/debian sid/main arm64 libk5crypto3 arm64 1.20.1-5 [79.9 kB] Get:85 http://localhost:3142/debian sid/main arm64 libkeyutils1 arm64 1.6.3-2 [8844 B] Get:86 http://localhost:3142/debian sid/main arm64 libssl3 arm64 3.0.12-2 [1811 kB] Get:87 http://localhost:3142/debian sid/main arm64 libkrb5-3 arm64 1.20.1-5 [315 kB] Get:88 http://localhost:3142/debian sid/main arm64 libgssapi-krb5-2 arm64 1.20.1-5 [124 kB] Get:89 http://localhost:3142/debian sid/main arm64 libtirpc3 arm64 1.3.3+ds-1 [80.9 kB] Get:90 http://localhost:3142/debian sid/main arm64 libnsl2 arm64 1.3.0-3 [37.5 kB] Get:91 http://localhost:3142/debian sid/main arm64 libtirpc-dev arm64 1.3.3+ds-1 [194 kB] Get:92 http://localhost:3142/debian sid/main arm64 libnsl-dev arm64 1.3.0-3 [66.3 kB] Get:93 http://localhost:3142/debian sid/main arm64 libc6-dev arm64 2.37-12 [1431 kB] Get:94 http://localhost:3142/debian sid/main arm64 libgomp1 arm64 13.2.0-6 [114 kB] Get:95 http://localhost:3142/debian sid/main arm64 libitm1 arm64 13.2.0-6 [23.8 kB] Get:96 http://localhost:3142/debian sid/main arm64 liblsan0 arm64 13.2.0-6 [1069 kB] Get:97 http://localhost:3142/debian sid/main arm64 libtsan0 arm64 11.4.0-5 [1957 kB] Get:98 http://localhost:3142/debian sid/main arm64 libstdc++6 arm64 13.2.0-6 [622 kB] Get:99 http://localhost:3142/debian sid/main arm64 libubsan1 arm64 13.2.0-6 [980 kB] Get:100 http://localhost:3142/debian sid/main arm64 libhwasan0 arm64 13.2.0-6 [1120 kB] Get:101 http://localhost:3142/debian sid/main arm64 libgcc-11-dev arm64 11.4.0-5 [929 kB] Get:102 http://localhost:3142/debian sid/main arm64 libstdc++-11-dev arm64 11.4.0-5 [1940 kB] Get:103 http://localhost:3142/debian sid/main arm64 zlib1g arm64 1:1.2.13.dfsg-3 [82.9 kB] Get:104 http://localhost:3142/debian sid/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-3 [913 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 101 MB in 1s (182 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 14609 files and directories currently installed.) Preparing to unpack .../000-liblocale-gettext-perl_1.07-6_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.20_all.deb ... Unpacking sensible-utils (0.0.20) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.45-2_amd64.deb ... Unpacking libmagic-mgc (1:5.45-2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../003-libmagic1_1%3a5.45-2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.45-2) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.45-2_amd64.deb ... Unpacking file (1:5.45-2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-13+b1_amd64.deb ... Unpacking gettext-base (0.21-13+b1) ... 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Setting up libgcc-s1-arm64-cross (13.2.0-6cross1) ... Setting up libatomic1-arm64-cross (13.2.0-6cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up liblsan0-arm64-cross (13.2.0-6cross1) ... Setting up libgomp1-arm64-cross (13.2.0-6cross1) ... Setting up gettext (0.21-13+b1) ... Setting up cpp-13-aarch64-linux-gnu (13.2.0-6cross1) ... Setting up libtool (2.4.7-7) ... Setting up libhwasan0-arm64-cross (13.2.0-6cross1) ... Setting up libc6-dev-arm64-cross (2.37-12cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libstdc++6-arm64-cross (13.2.0-6cross1) ... Setting up dh-autoreconf (20) ... Setting up cpp-aarch64-linux-gnu (4:13.2.0-1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up libasan8-arm64-cross (13.2.0-6cross1) ... Setting up libtsan2-arm64-cross (13.2.0-6cross1) ... Setting up libubsan1-arm64-cross (13.2.0-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-arm64-cross (13.2.0-6cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up debhelper (13.11.7) ... Setting up gcc-13-aarch64-linux-gnu (13.2.0-6cross1) ... Setting up libstdc++-13-dev-arm64-cross (13.2.0-6cross1) ... Setting up libxml-simple-perl (2.25-2) ... Setting up g++-13-aarch64-linux-gnu (13.2.0-6cross1) ... Setting up gcc-aarch64-linux-gnu (4:13.2.0-1) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-aarch64-linux-gnu (4:13.2.0-1) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-arm64 (12.10) ... Setting up libgcc-s1:arm64 (13.2.0-6) ... Setting up libc6:arm64 (2.37-12) ... Setting up libhwasan0:arm64 (13.2.0-6) ... Setting up libstdc++6:arm64 (13.2.0-6) ... Setting up liblsan0:arm64 (13.2.0-6) ... Setting up libitm1:arm64 (13.2.0-6) ... Setting up libtsan0:arm64 (11.4.0-5) ... Setting up libkeyutils1:arm64 (1.6.3-2) ... Setting up libssl3:arm64 (3.0.12-2) ... Setting up zlib1g:arm64 (1:1.2.13.dfsg-3) ... Setting up libcrypt1:arm64 (1:4.4.36-2) ... Setting up libcom-err2:arm64 (1.47.0-2+b1) ... Setting up libgomp1:arm64 (13.2.0-6) ... Setting up libasan6:arm64 (11.4.0-5) ... Setting up libkrb5support0:arm64 (1.20.1-5) ... Setting up libatomic1:arm64 (13.2.0-6) ... Setting up libk5crypto3:arm64 (1.20.1-5) ... Setting up libubsan1:arm64 (13.2.0-6) ... Setting up libgcc-11-dev:arm64 (11.4.0-5) ... Setting up libcrypt-dev:arm64 (1:4.4.36-2) ... Setting up libkrb5-3:arm64 (1.20.1-5) ... Setting up libgssapi-krb5-2:arm64 (1.20.1-5) ... Setting up libtirpc3:arm64 (1.3.3+ds-1) ... Setting up libtirpc-dev:arm64 (1.3.3+ds-1) ... Setting up libnsl2:arm64 (1.3.0-3) ... Setting up libnsl-dev:arm64 (1.3.0-3) ... Setting up libc6-dev:arm64 (2.37-12) ... Setting up libstdc++-11-dev:arm64 (11.4.0-5) ... Setting up zlib1g-dev:arm64 (1:1.2.13.dfsg-3) ... Setting up sbuild-build-depends-main-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-12) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.55-1 (2023-09-29) amd64 (x86_64) Toolchain package versions: binutils_2.41-6 dpkg-dev_1.22.1 g++-11_11.4.0-5 g++-13_13.2.0-6 gcc-11_11.4.0-5 gcc-13_13.2.0-6 libc6-dev_2.37-12 libstdc++-11-dev_11.4.0-5 libstdc++-13-dev_13.2.0-6 libstdc++-13-dev-arm64-cross_13.2.0-6cross1 libstdc++6_13.2.0-6 libstdc++6-arm64-cross_13.2.0-6cross1 linux-libc-dev_6.5.10-1 Package versions: adduser_3.137 apt_2.7.6 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-13 autotools-dev_20220109.1 base-files_13 base-passwd_3.6.2 bash_5.2.15-2+b6 binutils_2.41-6 binutils-aarch64-linux-gnu_2.41-6 binutils-common_2.41-6 binutils-x86-64-linux-gnu_2.41-6 bsdextrautils_2.39.2-5 bsdutils_1:2.39.2-5 build-essential_12.10 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:13.2.0-1 cpp-11_11.4.0-5 cpp-13_13.2.0-6 cpp-13-aarch64-linux-gnu_13.2.0-6cross1 cpp-aarch64-linux-gnu_4:13.2.0-1 cross-config_2.6.20 crossbuild-essential-arm64_12.10 dash_0.5.12-6 debconf_1.5.82 debhelper_13.11.7 debian-archive-keyring_2023.4 debianutils_5.14 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.10-1 dpkg_1.22.1 dpkg-cross_2.6.20 dpkg-dev_1.22.1 dwz_0.15-1 e2fsprogs_1.47.0-2+b1 fakeroot_1.32.2-1 file_1:5.45-2 findutils_4.9.0-5 g++_4:13.2.0-1 g++-11_11.4.0-5 g++-13_13.2.0-6 g++-13-aarch64-linux-gnu_13.2.0-6cross1 g++-aarch64-linux-gnu_4:13.2.0-1 gcc_4:13.2.0-1 gcc-11_11.4.0-5 gcc-11-base_11.4.0-5 gcc-12-base_12.3.0-11 gcc-13_13.2.0-6 gcc-13-aarch64-linux-gnu_13.2.0-6cross1 gcc-13-aarch64-linux-gnu-base_13.2.0-6cross1 gcc-13-base_13.2.0-6 gcc-13-cross-base_13.2.0-6cross1 gcc-9-base_9.5.0-4 gcc-aarch64-linux-gnu_4:13.2.0-1 gettext_0.21-13+b1 gettext-base_0.21-13+b1 gpgv_2.2.40-1.1 grep_3.11-3 groff-base_1.23.0-3 gzip_1.12-1 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.7.6 libarchive-zip-perl_1.68-1 libasan6_11.4.0-5 libasan8_13.2.0-6 libasan8-arm64-cross_13.2.0-6cross1 libatomic1_13.2.0-6 libatomic1-arm64-cross_13.2.0-6cross1 libattr1_1:2.5.1-4 libaudit-common_1:3.1.1-1 libaudit1_1:3.1.1-1 libbinutils_2.41-6 libblkid1_2.39.2-5 libbz2-1.0_1.0.8-5+b1 libc-bin_2.37-12 libc-dev-bin_2.37-12 libc6_2.37-12 libc6-arm64-cross_2.37-12cross1 libc6-dev_2.37-12 libc6-dev-arm64-cross_2.37-12cross1 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-4 libcc1-0_13.2.0-6 libcom-err2_1.47.0-2+b1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-2 libcrypt1_1:4.4.36-2 libctf-nobfd0_2.41-6 libctf0_2.41-6 libdb5.3_5.3.28+dfsg2-3 libdebconfclient0_0.271 libdebhelper-perl_13.11.7 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.1 libelf1_0.189-4 libext2fs2_1.47.0-2+b1 libfakeroot_1.32.2-1 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.4.0-5 libgcc-13-dev_13.2.0-6 libgcc-13-dev-arm64-cross_13.2.0-6cross1 libgcc-s1_13.2.0-6 libgcc-s1-arm64-cross_13.2.0-6cross1 libgcrypt20_1.10.2-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.3.0+dfsg-2 libgnutls30_3.8.1-4+b1 libgomp1_13.2.0-6 libgomp1-arm64-cross_13.2.0-6cross1 libgpg-error0_1.47-2 libgprofng0_2.41-6 libgssapi-krb5-2_1.20.1-5 libhogweed6_3.9.1-2 libhwasan0_13.2.0-6 libhwasan0-arm64-cross_13.2.0-6cross1 libicu72_72.1-4 libidn2-0_2.3.4-1+b1 libio-string-perl_1.08-4 libisl23_0.26-3 libitm1_13.2.0-6 libitm1-arm64-cross_13.2.0-6cross1 libjansson4_2.14-2 libk5crypto3_1.20.1-5 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-5 libkrb5support0_1.20.1-5 liblocale-gettext-perl_1.07-6 liblsan0_13.2.0-6 liblsan0-arm64-cross_13.2.0-6cross1 liblz4-1_1.9.4-1 liblzma5_5.4.4-0.1 libmagic-mgc_1:5.45-2 libmagic1_1:5.45-2 libmd0_1.1.0-1 libmount1_2.39.2-5 libmpc3_1.3.1-1 libmpfr6_4.2.1-1 libnettle8_3.9.1-2 libnsl-dev_1.3.0-3 libnsl2_1.3.0-3 libnumber-compare-perl_0.03-3 libp11-kit0_0.25.0-5 libpam-modules_1.5.2-9.1 libpam-modules-bin_1.5.2-9.1 libpam-runtime_1.5.2-9.1 libpam0g_1.5.2-9.1 libpcre2-8-0_10.42-4 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-9 libpipeline1_1.5.7-1 libquadmath0_13.2.0-6 libseccomp2_2.5.4-2 libselinux1_3.5-1 libsemanage-common_3.5-1 libsemanage2_3.5-1 libsepol2_3.5-1 libsframe1_2.41-6 libsmartcols1_2.39.2-5 libss2_1.47.0-2+b1 libssl3_3.0.12-2 libstdc++-11-dev_11.4.0-5 libstdc++-13-dev_13.2.0-6 libstdc++-13-dev-arm64-cross_13.2.0-6cross1 libstdc++6_13.2.0-6 libstdc++6-arm64-cross_13.2.0-6cross1 libsub-override-perl_0.09-4 libsystemd0_254.5-1 libtasn1-6_4.19.0-3 libtext-glob-perl_0.11-3 libtinfo6_6.4+20231016-1 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-7 libtsan0_11.4.0-5 libtsan2_13.2.0-6 libtsan2-arm64-cross_13.2.0-6cross1 libubsan1_13.2.0-6 libubsan1-arm64-cross_13.2.0-6cross1 libuchardet0_0.0.7-1 libudev1_254.5-1 libunistring2_1.0-2 libunistring5_1.1-2 libuuid1_2.39.2-5 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.3 libxxhash0_0.8.2-2 libyaml-perl_1.30-2 libzstd1_1.5.5+dfsg2-2 linux-libc-dev_6.5.10-1 linux-libc-dev-arm64-cross_6.5.8-1cross1 login_1:4.13+dfsg1-3 logsave_1.47.0-2+b1 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.0-1 mawk_1.3.4.20230808-1 mount_2.39.2-5 ncurses-base_6.4+20231016-1 ncurses-bin_6.4+20231016-1 passwd_1:4.13+dfsg1-3 patch_2.7.6-7 perl_5.36.0-9 perl-base_5.36.0-9 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-9 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.20 sysvinit-utils_3.08-3 tar_1.34+dfsg-1.2 tzdata_2023c-10 ucf_3.0043+nmu1 usrmerge_38 util-linux_2.39.2-5 util-linux-extra_2.39.2-5 xz-utils_5.4.4-0.1 zlib1g_1:1.2.13.dfsg-3 zlib1g-dev_1:1.2.13.dfsg-3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: tracetuner Binary: tracetuner Architecture: any Version: 3.0.6~beta+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://sourceforge.net/projects/tracetuner/ Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/tracetuner Vcs-Git: https://salsa.debian.org/med-team/tracetuner.git Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: tracetuner deb science optional arch=any Checksums-Sha1: b906dd41bad02c457fe780100f1338b8d549497a 385388 tracetuner_3.0.6~beta+dfsg.orig.tar.xz 7d39c02ac0576b6aeb23f5b9dd3648039e973070 7920 tracetuner_3.0.6~beta+dfsg-3.debian.tar.xz Checksums-Sha256: 24190cef98d7f6faaac35306c496d8fe16d72991da89d25cc589dcd5619938e0 385388 tracetuner_3.0.6~beta+dfsg.orig.tar.xz 917cdcb50d7b260af00c7500741db275e4a26428ae8a48acf2e228d6c6f131a2 7920 tracetuner_3.0.6~beta+dfsg-3.debian.tar.xz Files: 1662eaa5444391d0e824ee565ee3fa29 385388 tracetuner_3.0.6~beta+dfsg.orig.tar.xz f2f51592513f7b51710b12bf3f9bd33e 7920 tracetuner_3.0.6~beta+dfsg-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/KvegRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFfiQ//c/PDsFOmIqhHrhWNd1h5QI26kVh9RgtA xJlrSg6qJv81VSlZC6LjqjL/Rz09Fcw1hZ+1kP3A+dK6gMjnPEXtB0e9gCT+5rBF aomlL5ElsWJVk1zf6ik+Rs0Fsf5qzLKGSdhMr4QJYqMJ9gc5a1DOBMguJHhPZPWe /gqjUuE/cF4tJfuhzQUU/yU40UXK6UZu91v2uI/J26Esjqtm1ACHR+YVYFaHT5/9 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dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying fix_format_security.patch dpkg-source: info: applying cross.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.arm64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.xMasawgtbR/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-22b985ca-1c85-4108-9f3b-234208ea5b46 SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa XDG_SESSION_CLASS=user dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aarm64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package tracetuner dpkg-buildpackage: info: source version 3.0.6~beta+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-architecture: warning: specified GNU system type aarch64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --sourcedirectory=src --no-parallel debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' dh_auto_clean cd src && make -j1 clean make[2]: Entering directory '/<>/src' cd compute_qv; make clean make[3]: Entering directory '/<>/src/compute_qv' make[3]: Leaving directory '/<>/src/compute_qv' cd mktrain; make clean make[3]: Entering directory '/<>/src/mktrain' make[3]: Leaving directory '/<>/src/mktrain' cd mklut; make clean make[3]: Entering directory '/<>/src/mklut' make[3]: Leaving directory '/<>/src/mklut' cd mkchk; make clean make[3]: Entering directory '/<>/src/mkchk' make[3]: Leaving directory '/<>/src/mkchk' make[2]: Leaving directory '/<>/src' rm -rf lib obj rel make[1]: Leaving directory '/<>' dh_autoreconf_clean -O--sourcedirectory=src dh_clean -O--sourcedirectory=src rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/tracetuner.substvars debian/files rm -fr -- debian/tracetuner/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --sourcedirectory=src --no-parallel dh_update_autotools_config -a -O--sourcedirectory=src dh_autoreconf -a -O--sourcedirectory=src dh_auto_configure -a -O--sourcedirectory=src dh_auto_build -a -O--sourcedirectory=src cd src && make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=aarch64-linux-gnu-pkg-config CXX=aarch64-linux-gnu-g\+\+ CC=aarch64-linux-gnu-gcc make[1]: Entering directory '/<>/src' for dir in compute_qv mktrain mklut mkchk ; \ do (cd $dir; make EXTRACFLAGS="-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic" LDFLAGS="-Wl,-z,relro -Wl,-z,now -Wl,--as-needed" all); \ done make[2]: Entering directory '/<>/src/compute_qv' mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c main.c -o ../../obj/Linux_64/main.o main.c: In function ‘main’: main.c:2000:45: warning: the comparison will always evaluate as ‘true’ for the address of ‘ConsensusName’ will never be NULL [-Waddress] 2000 | if (ConsensusSpecified && ConsensusName != NULL) { | ^~ main.c:73:13: note: ‘ConsensusName’ declared here 73 | static char ConsensusName[BUFLEN]; /* path of consensus file */ | ^~~~~~~~~~~~~ main.c:1692:27: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 1692 | (void)strncpy(options.tal_dir, argv[++optind], | ^ main.c:1676:27: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 1676 | (void)strncpy(options.tab_dir, argv[++optind], | ^ main.c:1663:27: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 1663 | (void)strncpy(options.tip_dir, argv[++optind], | ^ main.c:1644:21: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1644 | strncpy(FastaDirName, argv[++optind], sizeof(FastaDirName)); | ^ main.c:1636:21: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1636 | strncpy(multiseqFileName, argv[++optind], | ^ main.c:1587:21: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1587 | strncpy(QualRptName, argv[++optind], sizeof(QualRptName)); | ^ main.c:1580:21: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1580 | strncpy(QualDirName, argv[++optind], sizeof(QualDirName)); | ^ main.c:1572:21: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1572 | strncpy(multiqualFileName, argv[++optind], | ^ main.c:1546:21: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1546 | strncpy(MultiFastaFilesDirName, argv[++optind], | ^ main.c:1485:27: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 1485 | (void)strncpy(options.inp_phd_dir, argv[++optind], | ^ main.c:1450:27: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 1450 | (void)strncpy(options.hpr_dir, argv[++optind], | ^ main.c:1421:27: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1421 | (void)strncpy(InputName, argv[++optind], | ^ main.c:1386:27: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1386 | (void)strncpy(InputName, argv[++optind], | ^ main.c:1391:27: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1391 | (void)strncpy(PhdDirName, argv[++optind], | ^ main.c:1397:27: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1397 | (void)strncpy(SCFDirName, argv[++optind], | ^ main.c:1400:27: warning: ‘__builtin_strncpy’ output may be truncated copying 256 bytes from a string of length 999 [-Wstringop-truncation] 1400 | (void)strncpy(options.scf_dir, SCFDirName, | ^ main.c:1376:27: warning: ‘__builtin_strncpy’ specified bound 256 equals destination size [-Wstringop-truncation] 1376 | (void)strncpy(options.poly_dir, argv[++optind], | ^ main.c:1346:27: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1346 | (void)strncpy(ConsensusName, argv[++optind], | ^ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mktrain/Btk_match_data.c -o ../../obj/Linux_64/Btk_match_data.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mktrain/Btk_compute_match.c -o ../../obj/Linux_64/Btk_compute_match.o ../mktrain/Btk_compute_match.c: In function ‘find_best_region’: ../mktrain/Btk_compute_match.c:658:13: warning: this ‘else’ clause does not guard... [-Wmisleading-indentation] 658 | else | ^~~~ ../mktrain/Btk_compute_match.c:660:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘else’ 660 | max=i; | ^~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mktrain/Btk_sw.c -o ../../obj/Linux_64/Btk_sw.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_process_indels.c -o ../../obj/Linux_64/Btk_process_indels.o Btk_process_indels.c: In function ‘get_autocorrelation_indel_size’: Btk_process_indels.c:644:42: warning: variable ‘max_height’ set but not used [-Wunused-but-set-variable] 644 | float *ans[NUM_COLORS], height = 0., max_height = 0.; | ^~~~~~~~~~ Btk_process_indels.c:642:25: warning: variable ‘best_color’ set but not used [-Wunused-but-set-variable] 642 | int i, j, color, best_color, n=1; | ^~~~~~~~~~ Btk_process_indels.c: In function ‘get_autocorrelation’: Btk_process_indels.c:409:5: warning: ‘correl’ accessing 4 bytes in a region of size 0 [-Wstringop-overflow=] 409 | correl(data1-1, data2-1, n, ans-1); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Btk_process_indels.c:409:5: note: referencing argument 1 of type ‘float[0]’ Btk_process_indels.c:409:5: warning: ‘correl’ accessing 4 bytes in a region of size 0 [-Wstringop-overflow=] Btk_process_indels.c:409:5: note: referencing argument 2 of type ‘float[0]’ Btk_process_indels.c:409:5: note: referencing argument 4 of type ‘float[0]’ In file included from Btk_process_indels.c:39: nr.h:54:6: note: in a call to function ‘correl’ 54 | void correl(float data1[], float data2[], unsigned long n, float ans[]); | ^~~~~~ Btk_process_indels.c: In function ‘Btk_process_indels’: Btk_process_indels.c:2471:9: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-truncation] 2471 | strncpy(prefix_name, options.file_name, prefix_len-1); | ^ Btk_process_indels.c:2470:22: note: length computed here 2470 | prefix_len = strlen(options.file_name) - strlen(suffix); | ^~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_atod.c -o ../../obj/Linux_64/Btk_atod.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_compute_qv.c -o ../../obj/Linux_64/Btk_compute_qv.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_call_bases.c -o ../../obj/Linux_64/Btk_call_bases.o Btk_call_bases.c: In function ‘get_best_peak_color_and_index_by_base_and_location’: Btk_call_bases.c:2988:28: warning: variable ‘new_location’ set but not used [-Wunused-but-set-variable] 2988 | int new_peak_index, new_location = location; | ^~~~~~~~~~~~ Btk_call_bases.c: In function ‘call_peak_by_location_color_and_index’: Btk_call_bases.c:3199:41: warning: variable ‘r’ set but not used [-Wunused-but-set-variable] 3199 | int i = base_ind, jc = color, j, l, r, k; | ^ Btk_call_bases.c: In function ‘mark_called_peaks’: Btk_call_bases.c:3547:28: warning: variable ‘cd_length’ set but not used [-Wunused-but-set-variable] 3547 | int Case, cd_index, cd_length; | ^~~~~~~~~ Btk_call_bases.c:3547:18: warning: variable ‘cd_index’ set but not used [-Wunused-but-set-variable] 3547 | int Case, cd_index, cd_length; | ^~~~~~~~ Btk_call_bases.c: In function ‘Btk_call_bases’: Btk_call_bases.c:3697:32: warning: variable ‘cweight’ set but not used [-Wunused-but-set-variable] 3697 | double height2, nweight, cweight; | ^~~~~~~ Btk_call_bases.c:3697:23: warning: variable ‘nweight’ set but not used [-Wunused-but-set-variable] 3697 | double height2, nweight, cweight; | ^~~~~~~ Btk_call_bases.c:3691:14: warning: variable ‘debug’ set but not used [-Wunused-but-set-variable] 3691 | char *debug, base, *context=NULL; | ^~~~~ Btk_call_bases.c: At top level: Btk_call_bases.c:117:25: warning: ‘gSpacEst0’ defined but not used [-Wunused-const-variable=] 117 | static const double gSpacEst0 = 12.0; | ^~~~~~~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_process_raw_data.c -o ../../obj/Linux_64/Btk_process_raw_data.o Btk_process_raw_data.c: In function ‘estimate_spacing_variation_of_shifted_peaks’: Btk_process_raw_data.c:1142:26: warning: variable ‘cd1’ set but not used [-Wunused-but-set-variable] 1142 | ColorData *cd0, *cd1; | ^~~ Btk_process_raw_data.c:1142:20: warning: variable ‘cd0’ set but not used [-Wunused-but-set-variable] 1142 | ColorData *cd0, *cd1; | ^~~ Btk_process_raw_data.c: In function ‘make_DP_mobility_shifts’: Btk_process_raw_data.c:2299:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 2299 | if (DEBUG_CURTIS && options->Verbose > 2 ) | ^~ Btk_process_raw_data.c:2300:28: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 2300 | putc('o', stderr); fflush(stderr); | ^~~~~~ Btk_process_raw_data.c:2650:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 2650 | for ( color=0; color < NUM_COLORS; color++ ) | ^~~ Btk_process_raw_data.c:2652:21: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 2652 | fprintf(fp, " %8.3g\n", shift_err[i]); | ^~~~~~~ Btk_process_raw_data.c: In function ‘normalize_signals’: Btk_process_raw_data.c:2956:40: warning: ordered comparison of pointer with integer zero [-Wpedantic] 2956 | norm_factor[i] = (num_peaks>0) ? ave_int[i][m] : -1; | ^ Btk_process_raw_data.c: In function ‘make_multicomponent_iteration’: Btk_process_raw_data.c:3305:21: warning: variable ‘best_pos’ set but not used [-Wunused-but-set-variable] 3305 | int best_pos; | ^~~~~~~~ Btk_process_raw_data.c:3247:15: warning: variable ‘det4’ set but not used [-Wunused-but-set-variable] 3247 | float det4; | ^~~~ Btk_process_raw_data.c: In function ‘mobility_shift_curve’: Btk_process_raw_data.c:1257:5: warning: ‘fpoly’ accessing 4 bytes in a region of size 0 [-Wstringop-overflow=] 1257 | fpoly(scan, powers-1, poly_degree); // compute powers of scan; put in array p | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Btk_process_raw_data.c:1257:5: note: referencing argument 2 of type ‘float[0]’ In file included from Btk_process_raw_data.c:44: util.h:49:6: note: in a call to function ‘fpoly’ 49 | void fpoly(float x, float p[], int np); | ^~~~~ Btk_process_raw_data.c: In function ‘make_DP_mobility_shifts’: Btk_process_raw_data.c:2567:17: warning: ‘fpoly’ accessing 4 bytes in a region of size 0 [-Wstringop-overflow=] 2567 | fpoly(peaks[i]->ipos+shift_flag[color], powers-1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2568 | POLYFIT_DEGREE+1); | ~~~~~~~~~~~~~~~~~ Btk_process_raw_data.c:2567:17: note: referencing argument 2 of type ‘float[0]’ util.h:49:6: note: in a call to function ‘fpoly’ 49 | void fpoly(float x, float p[], int np); | ^~~~~ Btk_process_raw_data.c: In function ‘make_DP_mobility_shifts.isra’: Btk_process_raw_data.c:2567:17: warning: array subscript -1 is outside array bounds of ‘float[6]’ [-Warray-bounds=] 2567 | fpoly(peaks[i]->ipos+shift_flag[color], powers-1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2568 | POLYFIT_DEGREE+1); | ~~~~~~~~~~~~~~~~~ Btk_process_raw_data.c:1992:19: note: at offset -4 into object ‘powers’ of size 24 1992 | float powers[POLYFIT_DEGREE+1]; | ^~~~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o ../../obj/Linux_64/util.o util.c: In function ‘mobShiftQuality’: util.c:980:17: warning: variable ‘count’ set but not used [-Wunused-but-set-variable] 980 | int count[MAX_CHUNKS]; | ^~~~~ util.c: In function ‘polyfit’: util.c:192:5: warning: ‘lfit’ accessing 4 bytes in a region of size 0 [-Wstringop-overflow=] 192 | lfit(x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, fpoly); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ util.c:192:5: note: referencing argument 6 of type ‘int[0]’ In file included from util.c:45: nr.h:63:6: note: in a call to function ‘lfit’ 63 | void lfit(float x[], float y[], float sig[], int ndat, float a[], int ia[], | ^~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c nr.c -o ../../obj/Linux_64/nr.o nr.c: In function ‘gaussj’: nr.c:487:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 487 | if (ipiv[j] != 1) | ^~ nr.c:497:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 497 | ++(ipiv[icol]); | ^~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_process_peaks.c -o ../../obj/Linux_64/Btk_process_peaks.o Btk_process_peaks.c: In function ‘colordata_detect_peaks’: Btk_process_peaks.c:524:45: warning: variable ‘relative_width’ set but not used [-Wunused-but-set-variable] 524 | sum_peak_width, average10_width, relative_width; | ^~~~~~~~~~~~~~ Btk_process_peaks.c: In function ‘add_one_peak’: Btk_process_peaks.c:2307:35: warning: variable ‘p2’ set but not used [-Wunused-but-set-variable] 2307 | Peak peak0, peak1, *p0, *p1, *p2; | ^~ Btk_process_peaks.c:2307:17: warning: variable ‘peak1’ set but not used [-Wunused-but-set-variable] 2307 | Peak peak0, peak1, *p0, *p1, *p2; | ^~~~~ Btk_process_peaks.c:2307:10: warning: variable ‘peak0’ set but not used [-Wunused-but-set-variable] 2307 | Peak peak0, peak1, *p0, *p1, *p2; | ^~~~~ Btk_process_peaks.c: In function ‘fit_single_peak’: Btk_process_peaks.c:2651:45: warning: variable ‘x2’ set but not used [-Wunused-but-set-variable] 2651 | double sum_exp = 0., sum_exp2 = 0., x2, B; | ^~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_qv_io.c -o ../../obj/Linux_64/Btk_qv_io.o Btk_qv_io.c: In function ‘Btk_read_sample_file’: Btk_qv_io.c:770:46: warning: ordered comparison of pointer with integer zero [-Wpedantic] 770 | if ((options.inp_phd == 0) && (num_bases > 0)) { | ^ Btk_qv_io.c:649:5: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 649 | fread(magic, 1, 2, fp); | ^~~~~~~~~~~~~~~~~~~~~~ Btk_qv_io.c: In function ‘output_scf_file’: Btk_qv_io.c:2636:5: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation] 2636 | strncpy(header.version, (scf_version == 2) ? "2.00" : "3.00", 4); | ^ Btk_qv_io.c: In function ‘Btk_read_sample_file’: Btk_qv_io.c:945:66: warning: ‘%s’ directive writing up to 999 bytes into a region of size 231 [-Wformat-overflow=] 945 | sprintf(message->text, "Could not read phd file: %s\n", | ^~ 946 | phd_file_name); | ~~~~~~~~~~~~~ In file included from /usr/aarch64-linux-gnu/include/stdio.h:906, from Btk_qv_io.c:27: In function ‘sprintf’, inlined from ‘Btk_read_sample_file’ at Btk_qv_io.c:945:17: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 27 and 1026 bytes into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ Btk_qv_io.c: In function ‘Btk_read_sample_file’: Btk_qv_io.c:918:62: warning: ‘%s’ directive writing up to 999 bytes into a region of size 231 [-Wformat-overflow=] 918 | sprintf(message->text, "Could not read phd file: %s\n", | ^~ 919 | phd_file_name); | ~~~~~~~~~~~~~ In function ‘sprintf’, inlined from ‘Btk_read_sample_file’ at Btk_qv_io.c:918:13: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 27 and 1026 bytes into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ Btk_qv_io.c: In function ‘Btk_output_poly_file’: Btk_qv_io.c:2962:59: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 230 [-Wformat-overflow=] 2962 | sprintf(message->text, "Unable to open POLY file '%s'\n", | ^~ 2963 | poly_name); | ~~~~~~~~~ In function ‘sprintf’, inlined from ‘Btk_output_poly_file’ at Btk_qv_io.c:2962:9: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 29 and 1052 bytes into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ Btk_qv_io.c: In function ‘Btk_output_poly_file_old’: Btk_qv_io.c:3104:59: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 230 [-Wformat-overflow=] 3104 | sprintf(message->text, "Unable to open POLY file '%s'\n", | ^~ 3105 | poly_name); | ~~~~~~~~~ In function ‘sprintf’, inlined from ‘Btk_output_poly_file_old’ at Btk_qv_io.c:3104:9: /usr/aarch64-linux-gnu/include/bits/stdio2.h:30:10: note: ‘__builtin___sprintf_chk’ output between 29 and 1052 bytes into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_compute_tp.c -o ../../obj/Linux_64/Btk_compute_tp.o Btk_compute_tp.c: In function ‘get_peak_height_ratio’: Btk_compute_tp.c:340:58: warning: variable ‘bad_ipos’ set but not used [-Wunused-but-set-variable] 340 | double max_uncalled_ipos = -1, min_called_ipos = -1, bad_ipos; | ^~~~~~~~ Btk_compute_tp.c: In function ‘get_peak_spacing_ratio’: Btk_compute_tp.c:394:17: warning: variable ‘bad_ipos’ set but not used [-Wunused-but-set-variable] 394 | double psr, bad_ipos, ipos; | ^~~~~~~~ Btk_compute_tp.c: At top level: Btk_compute_tp.c:634:54: warning: argument 3 of type ‘double *[4]’ with mismatched bound [-Warray-parameter=] 634 | Btk_compute_tp(Data *data, char *color2base, double *params[NUM_PARAMS], | ~~~~~~~~^~~~~~~~~~~~~~~~~~ In file included from Btk_compute_tp.c:48: Btk_compute_tp.h:31:43: note: previously declared as ‘double *[]’ 31 | extern int Btk_compute_tp(Data *, char *, double *[], ReadInfo *, | ^~~~~~~~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_compute_tpars.c -o ../../obj/Linux_64/Btk_compute_tpars.o Btk_compute_tpars.c: In function ‘data_create’: Btk_compute_tpars.c:215:33: warning: argument to ‘sizeof’ in ‘memset’ call is the same expression as the destination; did you mean to dereference it? [-Wsizeof-pointer-memaccess] 215 | (void)memset(data, 0, sizeof(data)); | ^ Btk_compute_tpars.c: In function ‘Btk_compute_tpars’: Btk_compute_tpars.c:804:38: warning: the comparison will always evaluate as ‘false’ for the address of ‘color_data’ will never be NULL [-Waddress] 804 | if ((&data.color_data[i] == NULL) || | ^~ In file included from Btk_compute_tpars.c:42: Btk_qv_data.h:150:16: note: ‘color_data’ declared here 150 | ColorData color_data[NUM_COLORS]; /* chromatograms */ | ^~~~~~~~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_get_mixed_bases.c -o ../../obj/Linux_64/Btk_get_mixed_bases.o Btk_get_mixed_bases.c: In function ‘mixed_base’: Btk_get_mixed_bases.c:142:10: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 142 | else if (((b1 == 'G') && (b2 == 'T')) || ((b1 == 'T') && (b2 == 'G'))) | ^~ Btk_get_mixed_bases.c:145:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 145 | return 'N'; | ^~~~~~ Btk_get_mixed_bases.c: In function ‘find_alternative_peaks’: Btk_get_mixed_bases.c:473:34: warning: ordered comparison of pointer with integer zero [-Wpedantic] 473 | if ((num_peaks_found > 0) && | ^ Btk_get_mixed_bases.c: In function ‘call_mixed_bases’: Btk_get_mixed_bases.c:744:55: warning: variable ‘cweight’ set but not used [-Wunused-but-set-variable] 744 | double ratio, ave_wiheight, wiheight, nweight=1., cweight=1.; | ^~~~~~~ Btk_get_mixed_bases.c:744:43: warning: variable ‘nweight’ set but not used [-Wunused-but-set-variable] 744 | double ratio, ave_wiheight, wiheight, nweight=1., cweight=1.; | ^~~~~~~ Btk_get_mixed_bases.c:740:24: warning: variable ‘pos’ set but not used [-Wunused-but-set-variable] 740 | int i, j, k, n, pos, jbest, kbest, curr_num2, prev_right_bound=0; | ^~~ Btk_get_mixed_bases.c:739:25: warning: variable ‘context’ set but not used [-Wunused-but-set-variable] 739 | char base, base2,*context = NULL; | ^~~~~~~ Btk_get_mixed_bases.c:739:18: warning: variable ‘base2’ set but not used [-Wunused-but-set-variable] 739 | char base, base2,*context = NULL; | ^~~~~ Btk_get_mixed_bases.c:739:12: warning: variable ‘base’ set but not used [-Wunused-but-set-variable] 739 | char base, base2,*context = NULL; | ^~~~ Btk_get_mixed_bases.c: In function ‘Btk_get_mixed_bases’: Btk_get_mixed_bases.c:1365:31: warning: variable ‘res’ set but not used [-Wunused-but-set-variable] 1365 | double ratio, wratio, res, w1, w2; | ^~~ Btk_get_mixed_bases.c:1365:23: warning: variable ‘wratio’ set but not used [-Wunused-but-set-variable] 1365 | double ratio, wratio, res, w1, w2; | ^~~~~~ In file included from Btk_get_mixed_bases.c:34: Btk_qv.h:119:23: warning: ‘altbases’ may be used uninitialized [-Wmaybe-uninitialized] 119 | #define FREE(x) if((x)!=NULL) {free((char *)(x));(x)=NULL;} | ^ Btk_get_mixed_bases.c:1439:5: note: in expansion of macro ‘FREE’ 1439 | FREE(altbases); | ^~~~ Btk_get_mixed_bases.c:1206:14: note: ‘altbases’ declared here 1206 | AltBase *altbases; | ^~~~~~~~ Btk_qv.h:119:23: warning: ‘altbases’ may be used uninitialized [-Wmaybe-uninitialized] 119 | #define FREE(x) if((x)!=NULL) {free((char *)(x));(x)=NULL;} | ^ Btk_get_mixed_bases.c:1439:5: note: in expansion of macro ‘FREE’ 1439 | FREE(altbases); | ^~~~ Btk_get_mixed_bases.c:1206:14: note: ‘altbases’ declared here 1206 | AltBase *altbases; | ^~~~~~~~ Btk_qv.h:119:23: warning: ‘altbases’ may be used uninitialized [-Wmaybe-uninitialized] 119 | #define FREE(x) if((x)!=NULL) {free((char *)(x));(x)=NULL;} | ^ Btk_get_mixed_bases.c:1439:5: note: in expansion of macro ‘FREE’ 1439 | FREE(altbases); | ^~~~ Btk_get_mixed_bases.c:1206:14: note: ‘altbases’ declared here 1206 | AltBase *altbases; | ^~~~~~~~ Btk_qv.h:119:23: warning: ‘altbases’ may be used uninitialized [-Wmaybe-uninitialized] 119 | #define FREE(x) if((x)!=NULL) {free((char *)(x));(x)=NULL;} | ^ Btk_get_mixed_bases.c:1439:5: note: in expansion of macro ‘FREE’ 1439 | FREE(altbases); | ^~~~ Btk_get_mixed_bases.c:1206:14: note: ‘altbases’ declared here 1206 | AltBase *altbases; | ^~~~~~~~ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_lookup_table.c -o ../../obj/Linux_64/Btk_lookup_table.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_qv_funs.c -o ../../obj/Linux_64/Btk_qv_funs.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ABI_Toolkit.c -o ../../obj/Linux_64/ABI_Toolkit.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c Btk_default_table.c -o ../../obj/Linux_64/Btk_default_table.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c FileHandler.c -o ../../obj/Linux_64/FileHandler.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c SCF_Toolkit.c -o ../../obj/Linux_64/SCF_Toolkit.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c context_table.c -o ../../obj/Linux_64/context_table.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c tracepoly.c -o ../../obj/Linux_64/tracepoly.o tracepoly.c: In function ‘gaussj’: tracepoly.c:631:13: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 631 | if (ipiv[j] != 1) | ^~ tracepoly.c:641:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 641 | ++(ipiv[icol]); | ^~ tracepoly.c: At top level: tracepoly.c:1111:29: warning: argument 2 of type ‘double[4][4000]’ with mismatched bound [-Warray-parameter=] 1111 | double xx_a[4][MaxNumBases], double yy_a[4][MaxNumBases], | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ In file included from tracepoly.c:37: tracepoly.h:64:37: note: previously declared as ‘double[][4000]’ 64 | int readGetCoefficients(ReadInfo *, double [][MaxNumBases], | ^~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:1111:58: warning: argument 3 of type ‘double[4][4000]’ with mismatched bound [-Warray-parameter=] 1111 | double xx_a[4][MaxNumBases], double yy_a[4][MaxNumBases], | ~~~~~~~^~~~~~~~~~~~~~~~~~~~ tracepoly.h:65:25: note: previously declared as ‘double[][4000]’ 65 | double [][MaxNumBases], int [], int); | ^~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:1112:26: warning: argument 4 of type ‘int[4]’ with mismatched bound [-Warray-parameter=] 1112 | int num_xy_a[4], int read_num ) | ~~~~^~~~~~~~~~~ tracepoly.h:65:49: note: previously declared as ‘int[]’ 65 | double [][MaxNumBases], int [], int); | ^~~~~~ tracepoly.c: In function ‘func_legendre_1based’: tracepoly.c:137:9: warning: ‘func_legendre_1based_sub’ accessing 8 bytes in a region of size 0 [-Wstringop-overflow=] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:137:9: note: referencing argument 3 of type ‘double[0]’ tracepoly.c:103:1: note: in a call to function ‘func_legendre_1based_sub’ 103 | func_legendre_1based_sub( FuncArgs* fa, double x, double pl[], int nl ) | ^~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘legendre_fit’: tracepoly.c:790:5: warning: ‘lfit’ accessing 4 bytes in a region of size 0 [-Wstringop-overflow=] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:790:5: note: referencing argument 7 of type ‘int[0]’ tracepoly.c:699:1: note: in a call to function ‘lfit’ 699 | lfit(FuncArgs* fa, | ^~~~ tracepoly.c: In function ‘func_legendre_1based’: tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds=] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c:132:27: note: at offset -8 into object ‘ptemp0’ of size 24 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ In function ‘legendre_fit’, inlined from ‘traceGetCoef.isra’ at tracepoly.c:947:9: tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds=] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceGetCoef.isra’: tracepoly.c:895:12: note: at offset -8 into object ‘xxxx’ of size 64000 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ In function ‘legendre_fit’, inlined from ‘traceGetCoef.isra’ at tracepoly.c:947:9: tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds=] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceGetCoef.isra’: tracepoly.c:895:33: note: at offset -8 into object ‘yyyy’ of size 64000 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ In function ‘legendre_fit’, inlined from ‘traceGetCoef.isra’ at tracepoly.c:947:9: tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds=] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceGetCoef.isra’: tracepoly.c:895:54: note: at offset -8 into object ‘sigma’ of size 64000 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~~ In function ‘legendre_fit’, inlined from ‘traceGetCoef.isra’ at tracepoly.c:947:9: tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds=] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceGetCoef.isra’: tracepoly.c:895:12: note: at offset -8 into object ‘xxxx’ of size 64000 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ In function ‘legendre_fit’, inlined from ‘traceGetCoef.isra’ at tracepoly.c:947:9: tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds=] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceGetCoef.isra’: tracepoly.c:895:33: note: at offset -8 into object ‘yyyy’ of size 64000 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~ In function ‘legendre_fit’, inlined from ‘traceGetCoef.isra’ at tracepoly.c:947:9: tracepoly.c:790:5: warning: array subscript -1 is outside array bounds of ‘double[8000]’ [-Warray-bounds=] 790 | lfit(fa, x-1, y-1, sig-1, n_data, a-1, ia-1, na, v, &chisq, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | func_legendre_1based); | ~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceGetCoef.isra’: tracepoly.c:895:54: note: at offset -8 into object ‘sigma’ of size 64000 895 | double xxxx[2*MaxNumBases], yyyy[2*MaxNumBases], sigma[2*MaxNumBases]; | ^~~~~ In function ‘func_legendre_1based’, inlined from ‘func_legendre_0based’ at tracepoly.c:153:5, inlined from ‘traceEvalPoly’ at tracepoly.c:839:5, inlined from ‘traceCalcCutoff’ at tracepoly.c:875:13: tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds=] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceCalcCutoff’: tracepoly.c:132:27: note: at offset -8 into object ‘ptemp0’ of size 24 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ In function ‘func_legendre_1based’, inlined from ‘func_legendre_0based’ at tracepoly.c:153:5, inlined from ‘traceEvalPoly’ at tracepoly.c:839:5: tracepoly.c:137:9: warning: array subscript -1 is outside array bounds of ‘double[3]’ [-Warray-bounds=] 137 | func_legendre_1based_sub( fa, x, ptemp0-1, n ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ tracepoly.c: In function ‘traceEvalPoly’: tracepoly.c:132:27: note: at offset -8 into object ‘ptemp0’ of size 24 132 | double *pl0 = pl1+1, ptemp0[2*NumCoef-1]; | ^~~~~~ /usr/bin/ar rc ../../lib/Linux_64/libtt.a ../../obj/Linux_64/Btk_match_data.o ../../obj/Linux_64/Btk_compute_match.o ../../obj/Linux_64/Btk_sw.o ../../obj/Linux_64/Btk_process_indels.o ../../obj/Linux_64/Btk_atod.o ../../obj/Linux_64/Btk_compute_qv.o ../../obj/Linux_64/Btk_call_bases.o ../../obj/Linux_64/Btk_process_raw_data.o ../../obj/Linux_64/util.o ../../obj/Linux_64/nr.o ../../obj/Linux_64/Btk_process_peaks.o ../../obj/Linux_64/Btk_qv_io.o ../../obj/Linux_64/Btk_compute_tp.o ../../obj/Linux_64/Btk_compute_tpars.o ../../obj/Linux_64/Btk_get_mixed_bases.o ../../obj/Linux_64/Btk_lookup_table.o ../../obj/Linux_64/Btk_qv_funs.o ../../obj/Linux_64/ABI_Toolkit.o ../../obj/Linux_64/Btk_default_table.o ../../obj/Linux_64/FileHandler.o ../../obj/Linux_64/SCF_Toolkit.o ../../obj/Linux_64/context_table.o ../../obj/Linux_64/tracepoly.o aarch64-linux-gnu-gcc -g -Wall -I../mktrain -DOS_NAME='"Linux"' -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -Wl,--as-needed ../../obj/Linux_64/main.o ../../lib/Linux_64/libtt.a -lm -o ../../rel/Linux_64/ttuner -Wl,-z,relro -Wl,-z,now -Wl,--as-needed make[2]: Leaving directory '/<>/src/compute_qv' make[2]: Entering directory '/<>/src/mktrain' mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c train.c -o ../../obj/Linux_64/train.o train.c: In function ‘main’: train.c:1431:26: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1431 | (void)strncpy(InputName, argv[++optind], sizeof(InputName)); | ^ train.c:1400:23: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1400 | (void)strncpy(OutputName, argv[++optind], sizeof(OutputName)); | ^ train.c:1357:27: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1357 | (void)strncpy(inp_phd_dir, argv[++optind], | ^ train.c:1511:23: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1511 | (void)strncpy(VectorName, argv[++optind], sizeof(VectorName)); | ^ train.c:1501:23: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1501 | (void)strncpy(SiteName, argv[++optind], sizeof(SiteName)); break; | ^ train.c:1437:23: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1437 | (void)strncpy(PrimerName, argv[++optind], sizeof(PrimerName)); | ^ train.c:1297:23: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1297 | (void)strncpy(ConsensusName, argv[++optind], | ^ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c train_data.c -o ../../obj/Linux_64/train_data.o train_data.c: In function ‘append_to_train_data’: train_data.c:217:5: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 217 | if (Verbose > 0) | ^~ train_data.c:220:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 220 | fprintf(fout, "# Clear range start :%4d end:%4d\n", | ^~~~~~~ aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -Wl,--as-needed ../../obj/Linux_64/train.o ../../obj/Linux_64/train_data.o ../../obj/Linux_64/Btk_compute_match.o ../../obj/Linux_64/Btk_match_data.o ../../obj/Linux_64/Btk_sw.o ../../lib/Linux_64/libtt.a -lm -o ../../rel/Linux_64/train -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I. -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c trainphd.c -o ../../obj/Linux_64/trainphd.o trainphd.c: In function ‘process_projectfile’: trainphd.c:653:13: warning: variable ‘buffer2’ set but not used [-Wunused-but-set-variable] 653 | char buffer2[BUFLEN]; | ^~~~~~~ trainphd.c: In function ‘main’: trainphd.c:931:35: error: format not a string literal and no format arguments [-Werror=format-security] 931 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:940:35: error: format not a string literal and no format arguments [-Werror=format-security] 940 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:959:40: error: format not a string literal and no format arguments [-Werror=format-security] 959 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:967:44: error: format not a string literal and no format arguments [-Werror=format-security] 967 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1011:40: error: format not a string literal and no format arguments [-Werror=format-security] 1011 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1018:40: error: format not a string literal and no format arguments [-Werror=format-security] 1018 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1084:40: error: format not a string literal and no format arguments [-Werror=format-security] 1084 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1091:40: error: format not a string literal and no format arguments [-Werror=format-security] 1091 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1123:35: error: format not a string literal and no format arguments [-Werror=format-security] 1123 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1128:35: error: format not a string literal and no format arguments [-Werror=format-security] 1128 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1134:40: error: format not a string literal and no format arguments [-Werror=format-security] 1134 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:1139:40: error: format not a string literal and no format arguments [-Werror=format-security] 1139 | fprintf(stderr, message.text); | ~~~~~~~^~~~~ trainphd.c:608:17: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-truncation] 608 | strncpy(path2, string, strlen(string)-strlen(name)); // remove the phd.1 suffix | ^ In function ‘process_dir’, inlined from ‘main’ at trainphd.c:1095:17: trainphd.c:608:40: note: length computed here 608 | strncpy(path2, string, strlen(string)-strlen(name)); // remove the phd.1 suffix | ^~~~~~~~~~~~~~ trainphd.c: In function ‘main’: trainphd.c:735:17: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-truncation] 735 | strncpy(tabFileName, string, strlen(string)-strlen(name)); // remove the phd.1 suffix | ^ In function ‘process_projectfile’, inlined from ‘main’ at trainphd.c:1105:13: trainphd.c:735:46: note: length computed here 735 | strncpy(tabFileName, string, strlen(string)-strlen(name)); // remove the phd.1 suffix | ^~~~~~~~~~~~~~ trainphd.c: In function ‘main’: trainphd.c:1041:25: warning: ‘__builtin___strncpy_chk’ specified bound depends on the length of the source argument [-Wstringop-truncation] 1041 | strncpy(tab_file_name, string, strlen(string)-strlen(name)); | ^ trainphd.c:1041:56: note: length computed here 1041 | strncpy(tab_file_name, string, strlen(string)-strlen(name)); | ^~~~~~~~~~~~~~ trainphd.c:896:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 896 | (void)strncpy(tab_dir_name, optarg, sizeof(tab_dir_name)); | ^ trainphd.c:856:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 856 | (void)strncpy(OutputName, optarg, sizeof(OutputName)); | ^ trainphd.c:864:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 864 | (void)strncpy(InputName, optarg, sizeof(InputName)); | ^ trainphd.c:860:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 860 | (void)strncpy(InputName, optarg, sizeof(InputName)); | ^ trainphd.c:818:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 818 | (void)strncpy(VectorName, optarg, sizeof(VectorName)); | ^ trainphd.c:822:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 822 | (void)strncpy(SiteName, optarg, sizeof(SiteName)); | ^ trainphd.c:814:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 814 | (void)strncpy(PrimerName, optarg, sizeof(PrimerName)); | ^ trainphd.c:849:19: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 849 | (void)strncpy(ConsensusName, optarg, sizeof(ConsensusName)); | ^ cc1: some warnings being treated as errors make[2]: *** [../include.mk:180: ../../obj/Linux_64/trainphd.o] Error 1 make[2]: Leaving directory '/<>/src/mktrain' make[2]: Entering directory '/<>/src/mklut' mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c lut.c -o ../../obj/Linux_64/lut.o lut.c: In function ‘read_bases_and_populate_bins’: lut.c:438:26: warning: variable ‘cchar’ set but not used [-Wunused-but-set-variable] 438 | char schar, cchar; /* Sample and consensus characters. */ | ^~~~~ lut.c:437:25: warning: variable ‘cpos’ set but not used [-Wunused-but-set-variable] 437 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c:437:19: warning: variable ‘spos’ set but not used [-Wunused-but-set-variable] 437 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c: In function ‘create_qv_table_via_dynamic_programming’: lut.c:894:5: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 894 | for (i = 1; i < (MAX_QV / 10); i++) | ^~~ lut.c:899:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 899 | fprintf(fout, "\n"); | ^~~~~~~ lut.c: In function ‘compress_params_array’: lut.c:1012:13: warning: variable ‘max_weight’ set but not used [-Wunused-but-set-variable] 1012 | int max_weight=0, *wn; | ^~~~~~~~~~ lut.c: In function ‘read_and_sort_trace_parameters’: lut.c:1112:21: warning: variable ‘cchar’ set but not used [-Wunused-but-set-variable] 1112 | char schar, cchar; /* Sample and consensus characters. */ | ^~~~~ lut.c:1111:20: warning: variable ‘cpos’ set but not used [-Wunused-but-set-variable] 1111 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c:1111:14: warning: variable ‘spos’ set but not used [-Wunused-but-set-variable] 1111 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ lut.c: In function ‘main’: lut.c:1404:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1404 | t1 = time((time_t) NULL); | ^ | | | long int In file included from lut.c:45: /usr/aarch64-linux-gnu/include/time.h:76:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 76 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1449:34: warning: format ‘%d’ expects argument of type ‘int *’, but argument 3 has type ‘unsigned int *’ [-Wformat=] 1449 | sscanf(optarg, "%d", &threshold_count); | ~^ ~~~~~~~~~~~~~~~~ | | | | | unsigned int * | int * | %d lut.c:1520:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1520 | t2 = time((time_t) NULL); | ^ | | | long int /usr/aarch64-linux-gnu/include/time.h:76:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 76 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1573:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1573 | t2 = time((time_t) NULL); | ^ | | | long int /usr/aarch64-linux-gnu/include/time.h:76:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 76 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1604:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1604 | t2 = time((time_t) NULL); | ^ | | | long int /usr/aarch64-linux-gnu/include/time.h:76:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 76 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1645:15: warning: passing argument 1 of ‘time’ makes pointer from integer without a cast [-Wint-conversion] 1645 | t2 = time((time_t) NULL); | ^ | | | long int /usr/aarch64-linux-gnu/include/time.h:76:29: note: expected ‘time_t *’ {aka ‘long int *’} but argument is of type ‘long int’ 76 | extern time_t time (time_t *__timer) __THROW; | ~~~~~~~~^~~~~~~ lut.c:1459:23: warning: ‘__builtin_strncpy’ specified bound 1000 equals destination size [-Wstringop-truncation] 1459 | (void)strncpy(OutputName, optarg, sizeof(OutputName)); | ^ mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c select.c -o ../../obj/Linux_64/select.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c func_name.c -o ../../obj/Linux_64/func_name.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c get_thresholds.c -o ../../obj/Linux_64/get_thresholds.o mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I. -I/home/gdenisov/build/include/io_lib -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -I../mkchk -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c ../mkchk/check_data.c -o ../../obj/Linux_64/check_data.o ../mkchk/check_data.c: In function ‘get_bases’: ../mkchk/check_data.c:47:25: warning: variable ‘cpos’ set but not used [-Wunused-but-set-variable] 47 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ ../mkchk/check_data.c:47:19: warning: variable ‘spos’ set but not used [-Wunused-but-set-variable] 47 | int spos, cpos; /* Sample and consensus positions. */ | ^~~~ aarch64-linux-gnu-g++ ../../obj/Linux_64/lut.o ../../obj/Linux_64/select.o ../../obj/Linux_64/func_name.o ../../obj/Linux_64/get_thresholds.o ../../obj/Linux_64/check_data.o -o ../../rel/Linux_64/lut -lm -lz ../../lib/Linux_64/libtt.a -Wl,-z,relro -Wl,-z,now -Wl,--as-needed make[2]: Leaving directory '/<>/src/mklut' make[2]: Entering directory '/<>/src/mkchk' mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkbc.c -o ../../obj/Linux_64/checkbc.o aarch64-linux-gnu-g++ ../../obj/Linux_64/checkbc.o ../../obj/Linux_64/check_data.o ../../lib/Linux_64/libtt.a -lm -lz -o ../../rel/Linux_64/checkbc -lm -lz ../../lib/Linux_64/libtt.a -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkqv.c -o ../../obj/Linux_64/checkqv.o checkqv.c: In function ‘crossValidate’: checkqv.c:84:9: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 84 | if (base[i].schar != '-') | ^~ checkqv.c:87:13: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 87 | qv = get_quality_value(base[i].parameter[0], | ^~ aarch64-linux-gnu-g++ ../../obj/Linux_64/checkqv.o ../../obj/Linux_64/check_data.o ../../lib/Linux_64/libtt.a -lm -lz -o ../../rel/Linux_64/checkqv -lm -lz ../../lib/Linux_64/libtt.a -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkbcphd.c -o ../../obj/Linux_64/checkbcphd.o checkbcphd.c: In function ‘errorStatswithQVs’: checkbcphd.c:197:18: warning: unknown escape sequence: '\%' 197 | char c = '\%'; | ^~~~ checkbcphd.c:50:51: warning: variable ‘qvo’ set but not used [-Wunused-but-set-variable] 50 | Nqvp[MAXNUMBINS+1], qvp[MAXNUMBINS+1], qvo[MAXNUMBINS+1]; | ^~~ checkbcphd.c:50:32: warning: variable ‘qvp’ set but not used [-Wunused-but-set-variable] 50 | Nqvp[MAXNUMBINS+1], qvp[MAXNUMBINS+1], qvo[MAXNUMBINS+1]; | ^~~ aarch64-linux-gnu-g++ ../../obj/Linux_64/checkbcphd.o ../../obj/Linux_64/check_data.o ../../lib/Linux_64/libtt.a -lm -lz -o ../../rel/Linux_64/checkbcphd -lm -lz ../../lib/Linux_64/libtt.a -Wl,-z,relro -Wl,-z,now -Wl,--as-needed mkdir -p ../../obj/Linux_64 aarch64-linux-gnu-gcc -g -Wall -I../compute_qv -I../mktrain -I../mklut -I. -I -I../../../jtc_tt -I. -I../../../io_lib -I../../../io_lib/utils -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -c checkqvphd.c -o ../../obj/Linux_64/checkqvphd.o aarch64-linux-gnu-g++ ../../obj/Linux_64/checkqvphd.o ../../obj/Linux_64/check_data.o ../../lib/Linux_64/libtt.a -lm -lz -o ../../rel/Linux_64/checkqvphd -lm -lz ../../lib/Linux_64/libtt.a -Wl,-z,relro -Wl,-z,now -Wl,--as-needed make[2]: Leaving directory '/<>/src/mkchk' make[1]: Leaving directory '/<>/src' dh: command-omitted: The call to "dh_auto_test -a -O--sourcedirectory=src" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -a -O--sourcedirectory=src dh_prep -a -O--sourcedirectory=src rm -f -- debian/tracetuner.substvars rm -fr -- debian/.debhelper/generated/tracetuner/ debian/tracetuner/ debian/tmp/ dh_installdirs -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/usr/bin debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_auto_install install -m0755 -d /<>/tracetuner-3.0.6\~beta\+dfsg/debian/tracetuner find rel -mindepth 2 -type f | xargs -r mv --target-directory=/<>/debian/tracetuner/usr/bin/ make[1]: Leaving directory '/<>' dh_installdocs -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/usr/share/doc/tracetuner install -m0755 -d debian/tracetuner/usr/share/doc/tracetuner cp --reflink=auto -a ./src/README debian/tracetuner/usr/share/doc/tracetuner cp --reflink=auto -a ./doc/RELEASE_NOTES debian/tracetuner/usr/share/doc/tracetuner chmod -R u\+rw,go=rX debian/tracetuner/usr/share/doc install -p -m0644 debian/README.Debian debian/tracetuner/usr/share/doc/tracetuner/README.Debian install -p -m0644 debian/copyright debian/tracetuner/usr/share/doc/tracetuner/copyright dh_installchangelogs -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/usr/share/doc/tracetuner install -p -m0644 debian/.debhelper/generated/tracetuner/dh_installchangelogs.dch.trimmed debian/tracetuner/usr/share/doc/tracetuner/changelog.Debian dh_installman -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/usr/share/man/man1/ install -p -m0644 ./debian/mans/train.1 debian/tracetuner/usr/share/man/man1/train.1 install -m0755 -d debian/tracetuner/usr/share/man/man1/ install -p -m0644 ./debian/mans/trainphd.1 debian/tracetuner/usr/share/man/man1/trainphd.1 install -m0755 -d debian/tracetuner/usr/share/man/man1/ install -p -m0644 ./debian/mans/ttuner.1 debian/tracetuner/usr/share/man/man1/ttuner.1 man-recode --to-code UTF-8 --suffix .dh-new debian/tracetuner/usr/share/man/man1/train.1 debian/tracetuner/usr/share/man/man1/trainphd.1 debian/tracetuner/usr/share/man/man1/ttuner.1 mv debian/tracetuner/usr/share/man/man1/train.1.dh-new debian/tracetuner/usr/share/man/man1/train.1 mv debian/tracetuner/usr/share/man/man1/trainphd.1.dh-new debian/tracetuner/usr/share/man/man1/trainphd.1 mv debian/tracetuner/usr/share/man/man1/ttuner.1.dh-new debian/tracetuner/usr/share/man/man1/ttuner.1 chmod 0644 -- debian/tracetuner/usr/share/man/man1/train.1 debian/tracetuner/usr/share/man/man1/trainphd.1 debian/tracetuner/usr/share/man/man1/ttuner.1 dh_installsystemduser -a -O--sourcedirectory=src dh_perl -a -O--sourcedirectory=src dh_link -a -O--sourcedirectory=src dh_strip_nondeterminism -a -O--sourcedirectory=src dh_compress -a -O--sourcedirectory=src cd debian/tracetuner chmod a-x usr/share/doc/tracetuner/README usr/share/doc/tracetuner/RELEASE_NOTES usr/share/doc/tracetuner/changelog.Debian usr/share/man/man1/train.1 usr/share/man/man1/trainphd.1 usr/share/man/man1/ttuner.1 gzip -9nf usr/share/doc/tracetuner/README usr/share/doc/tracetuner/RELEASE_NOTES usr/share/doc/tracetuner/changelog.Debian usr/share/man/man1/train.1 usr/share/man/man1/trainphd.1 usr/share/man/man1/ttuner.1 cd '/<>' dh_fixperms -a -O--sourcedirectory=src find debian/tracetuner ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/tracetuner/usr/share/doc -type f -a -true -a ! -regex 'debian/tracetuner/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tracetuner/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/tracetuner/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tracetuner -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/tracetuner/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a -O--sourcedirectory=src dh_dwz -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/tracetuner/usr/lib/debug/.dwz/aarch64-linux-gnu/tracetuner.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/tracetuner.debug -- debian/tracetuner/usr/bin/checkbc debian/tracetuner/usr/bin/checkbcphd debian/tracetuner/usr/bin/checkqv debian/tracetuner/usr/bin/checkqvphd debian/tracetuner/usr/bin/lut debian/tracetuner/usr/bin/train debian/tracetuner/usr/bin/ttuner aarch64-linux-gnu-objcopy --compress-debug-sections debian/tracetuner/usr/lib/debug/.dwz/aarch64-linux-gnu/tracetuner.debug chmod 0644 -- debian/tracetuner/usr/lib/debug/.dwz/aarch64-linux-gnu/tracetuner.debug dh_strip -a -O--sourcedirectory=src install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/12 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/train debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/12/c1ef7c11805596189e8d19ad344cedda4a590e.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/12/c1ef7c11805596189e8d19ad344cedda4a590e.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/train aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/12/c1ef7c11805596189e8d19ad344cedda4a590e.debug debian/tracetuner/usr/bin/train install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/72 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/ttuner debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/72/2139aec3a236d138ca7b6a6e3389349c4840d7.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/72/2139aec3a236d138ca7b6a6e3389349c4840d7.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/ttuner aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/72/2139aec3a236d138ca7b6a6e3389349c4840d7.debug debian/tracetuner/usr/bin/ttuner install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/b2 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkqv debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/b2/6e81fff4515bc954908fe0e5866ce5ee00596c.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/b2/6e81fff4515bc954908fe0e5866ce5ee00596c.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkqv aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/b2/6e81fff4515bc954908fe0e5866ce5ee00596c.debug debian/tracetuner/usr/bin/checkqv install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/27 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/lut debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/27/5ce029e223dccdea3e2df0f764ecf9a59e9e78.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/27/5ce029e223dccdea3e2df0f764ecf9a59e9e78.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/lut aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/27/5ce029e223dccdea3e2df0f764ecf9a59e9e78.debug debian/tracetuner/usr/bin/lut install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/78 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkqvphd debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/78/90e3dab42c58333657e5df14865bb2224b36a2.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/78/90e3dab42c58333657e5df14865bb2224b36a2.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkqvphd aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/78/90e3dab42c58333657e5df14865bb2224b36a2.debug debian/tracetuner/usr/bin/checkqvphd install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/9d aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkbcphd debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/9d/529253d5e444a6f09231a525c9b55fdf424260.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/9d/529253d5e444a6f09231a525c9b55fdf424260.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkbcphd aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/9d/529253d5e444a6f09231a525c9b55fdf424260.debug debian/tracetuner/usr/bin/checkbcphd install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/31 aarch64-linux-gnu-objcopy --only-keep-debug --compress-debug-sections debian/tracetuner/usr/bin/checkbc debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/31/12fe770b0e9bb24b56d4ad6ff102e764efeed9.debug chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/31/12fe770b0e9bb24b56d4ad6ff102e764efeed9.debug aarch64-linux-gnu-strip --remove-section=.comment --remove-section=.note debian/tracetuner/usr/bin/checkbc aarch64-linux-gnu-objcopy --add-gnu-debuglink debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.build-id/31/12fe770b0e9bb24b56d4ad6ff102e764efeed9.debug debian/tracetuner/usr/bin/checkbc install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/tracetuner/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/tracetuner/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/tracetuner/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/tracetuner/usr/lib/debug install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/usr/share/doc ln -s tracetuner debian/.debhelper/tracetuner/dbgsym-root/usr/share/doc/tracetuner-dbgsym install -m0755 -d debian/.debhelper/tracetuner dh_makeshlibs -a -O--sourcedirectory=src rm -f debian/tracetuner/DEBIAN/shlibs dh_shlibdeps -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/DEBIAN dpkg-shlibdeps -Tdebian/tracetuner.substvars debian/tracetuner/usr/bin/train debian/tracetuner/usr/bin/ttuner debian/tracetuner/usr/bin/checkqv debian/tracetuner/usr/bin/lut debian/tracetuner/usr/bin/checkqvphd debian/tracetuner/usr/bin/checkbcphd debian/tracetuner/usr/bin/checkbc dh_installdeb -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/DEBIAN dh_gencontrol -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/DEBIAN echo misc:Depends= >> debian/tracetuner.substvars echo misc:Pre-Depends= >> debian/tracetuner.substvars install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/DEBIAN dpkg-gencontrol -ptracetuner -ldebian/changelog -Tdebian/tracetuner.substvars -Pdebian/.debhelper/tracetuner/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=tracetuner-dbgsym "-DDepends=tracetuner (= \${binary:Version})" "-DDescription=debug symbols for tracetuner" "-DBuild-Ids=12c1ef7c11805596189e8d19ad344cedda4a590e 275ce029e223dccdea3e2df0f764ecf9a59e9e78 3112fe770b0e9bb24b56d4ad6ff102e764efeed9 722139aec3a236d138ca7b6a6e3389349c4840d7 7890e3dab42c58333657e5df14865bb2224b36a2 9d529253d5e444a6f09231a525c9b55fdf424260 b26e81fff4515bc954908fe0e5866ce5ee00596c" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/DEBIAN/control dpkg-gencontrol -ptracetuner -ldebian/changelog -Tdebian/tracetuner.substvars -Pdebian/tracetuner chmod 0644 -- debian/tracetuner/DEBIAN/control dh_md5sums -a -O--sourcedirectory=src install -m0755 -d debian/tracetuner/DEBIAN cd debian/tracetuner >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/tracetuner/DEBIAN/md5sums install -m0755 -d debian/.debhelper/tracetuner/dbgsym-root/DEBIAN cd debian/.debhelper/tracetuner/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/tracetuner/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--sourcedirectory=src dpkg-deb --root-owner-group --build debian/tracetuner .. dpkg-deb: building package 'tracetuner' in '../tracetuner_3.0.6~beta+dfsg-3_arm64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/tracetuner/dbgsym-root .. dpkg-deb: building package 'tracetuner-dbgsym' in '../tracetuner-dbgsym_3.0.6~beta+dfsg-3_arm64.deb'. dpkg-genbuildinfo --build=any -O../tracetuner_3.0.6~beta+dfsg-3_arm64.buildinfo dpkg-genchanges --build=any -O../tracetuner_3.0.6~beta+dfsg-3_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-11-09T14:12:46Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ tracetuner_3.0.6~beta+dfsg-3_arm64.changes: ------------------------------------------- Format: 1.8 Date: Fri, 04 Dec 2020 23:43:55 +0100 Source: tracetuner Binary: tracetuner tracetuner-dbgsym Built-For-Profiles: cross nocheck Architecture: arm64 Version: 3.0.6~beta+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: tracetuner - interpretation of DNA Sanger sequencing data Changes: tracetuner (3.0.6~beta+dfsg-3) unstable; urgency=medium . * Team upload. * Standards-Version: 4.5.1 (routine-update) * debhelper-compat 13 (routine-update) * Remove trailing whitespace in debian/control (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: da3aabfc515b760c7326dab09d2847a30df83d91 1192924 tracetuner-dbgsym_3.0.6~beta+dfsg-3_arm64.deb 30d457145d69c4b57e7ca76c82afa1a1390c13f3 5381 tracetuner_3.0.6~beta+dfsg-3_arm64.buildinfo 36fc8be54cf54909b3a5acc13d3b728c82ae62b3 319336 tracetuner_3.0.6~beta+dfsg-3_arm64.deb Checksums-Sha256: 306b458e30b234700f40921846e38ccd37a663094f8574c96214c913604feed7 1192924 tracetuner-dbgsym_3.0.6~beta+dfsg-3_arm64.deb bc724fe3cc6880877076ad7e5584eeb4adc29e75722c9f2791b4080f8bfde9c1 5381 tracetuner_3.0.6~beta+dfsg-3_arm64.buildinfo 82677238ee34a8c2653b91900a91d38d27c1c55ffce2de1b53bf6f603ce2ac2c 319336 tracetuner_3.0.6~beta+dfsg-3_arm64.deb Files: 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306b458e30b234700f40921846e38ccd37a663094f8574c96214c913604feed7 1192924 tracetuner-dbgsym_3.0.6~beta+dfsg-3_arm64.deb 82677238ee34a8c2653b91900a91d38d27c1c55ffce2de1b53bf6f603ce2ac2c 319336 tracetuner_3.0.6~beta+dfsg-3_arm64.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Thu, 09 Nov 2023 14:12:46 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-13), autotools-dev (= 20220109.1), base-files (= 13), base-passwd (= 3.6.2), bash (= 5.2.15-2+b6), binutils (= 2.41-6), binutils-common (= 2.41-6), binutils-x86-64-linux-gnu (= 2.41-6), bsdextrautils (= 2.39.2-5), bsdutils (= 1:2.39.2-5), build-essential (= 12.10), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:13.2.0-1), cpp-11 (= 11.4.0-5), cpp-13 (= 13.2.0-6), dash (= 0.5.12-6), debconf (= 1.5.82), debhelper (= 13.11.7), debianutils (= 5.14), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.10-1), dpkg (= 1.22.1), dpkg-dev (= 1.22.1), dwz (= 0.15-1), file (= 1:5.45-2), findutils (= 4.9.0-5), g++ (= 4:13.2.0-1), g++-13 (= 13.2.0-6), gcc (= 4:13.2.0-1), gcc-11 (= 11.4.0-5), gcc-11-base (= 11.4.0-5), gcc-13 (= 13.2.0-6), gcc-13-base (= 13.2.0-6), gettext (= 0.21-13+b1), gettext-base (= 0.21-13+b1), grep (= 3.11-3), groff-base (= 1.23.0-3), gzip (= 1.12-1), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.4.0-5), libasan8 (= 13.2.0-6), libatomic1 (= 13.2.0-6), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.1.1-1), libaudit1 (= 1:3.1.1-1), libbinutils (= 2.41-6), libblkid1 (= 2.39.2-5), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.37-12), libc-dev-bin (= 2.37-12), libc6 (= 2.37-12), libc6-dev (= 2.37-12), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-4), libcc1-0 (= 13.2.0-6), libcom-err2 (= 1.47.0-2+b1), libcrypt-dev (= 1:4.4.36-2), libcrypt1 (= 1:4.4.36-2), libctf-nobfd0 (= 2.41-6), libctf0 (= 2.41-6), libdb5.3 (= 5.3.28+dfsg2-3), libdebconfclient0 (= 0.271), libdebhelper-perl (= 13.11.7), libdpkg-perl (= 1.22.1), libelf1 (= 0.189-4), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.4.0-5), libgcc-13-dev (= 13.2.0-6), libgcc-s1 (= 13.2.0-6), libgcrypt20 (= 1.10.2-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.3.0+dfsg-2), libgomp1 (= 13.2.0-6), libgpg-error0 (= 1.47-2), libgprofng0 (= 2.41-6), libgssapi-krb5-2 (= 1.20.1-5), libhwasan0 (= 13.2.0-6), libicu72 (= 72.1-4), libisl23 (= 0.26-3), libitm1 (= 13.2.0-6), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-5), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-5), libkrb5support0 (= 1.20.1-5), liblsan0 (= 13.2.0-6), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.4.4-0.1), libmagic-mgc (= 1:5.45-2), libmagic1 (= 1:5.45-2), libmd0 (= 1.1.0-1), libmount1 (= 2.39.2-5), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.1-1), libnsl-dev (= 1.3.0-3), libnsl2 (= 1.3.0-3), libnumber-compare-perl (= 0.03-3), libpam-modules (= 1.5.2-9.1), libpam-modules-bin (= 1.5.2-9.1), libpam-runtime (= 1.5.2-9.1), libpam0g (= 1.5.2-9.1), libpcre2-8-0 (= 10.42-4), libperl5.36 (= 5.36.0-9), libpipeline1 (= 1.5.7-1), libquadmath0 (= 13.2.0-6), libseccomp2 (= 2.5.4-2), libselinux1 (= 3.5-1), libsframe1 (= 2.41-6), libsmartcols1 (= 2.39.2-5), libssl3 (= 3.0.12-2), libstdc++-13-dev (= 13.2.0-6), libstdc++6 (= 13.2.0-6), libsub-override-perl (= 0.09-4), libsystemd0 (= 254.5-1), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4+20231016-1), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-7), libtsan0 (= 11.4.0-5), libtsan2 (= 13.2.0-6), libubsan1 (= 13.2.0-6), libuchardet0 (= 0.0.7-1), libudev1 (= 254.5-1), libunistring5 (= 1.1-2), libuuid1 (= 2.39.2-5), libxml2 (= 2.9.14+dfsg-1.3), libzstd1 (= 1.5.5+dfsg2-2), linux-libc-dev (= 6.5.10-1), login (= 1:4.13+dfsg1-3), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.0-1), mawk (= 1.3.4.20230808-1), ncurses-base (= 6.4+20231016-1), ncurses-bin (= 6.4+20231016-1), patch (= 2.7.6-7), perl (= 5.36.0-9), perl-base (= 5.36.0-9), perl-modules-5.36 (= 5.36.0-9), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.20), sysvinit-utils (= 3.08-3), tar (= 1.34+dfsg-1.2), usrmerge (= 38), util-linux (= 2.39.2-5), xz-utils (= 5.4.4-0.1), zlib1g (= 1:1.2.13.dfsg-3), zlib1g-dev (= 1:1.2.13.dfsg-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1607121835" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ tracetuner-dbgsym_3.0.6~beta+dfsg-3_arm64.deb --------------------------------------------- new Debian package, version 2.0. size 1192924 bytes: control archive=916 bytes. 649 bytes, 12 lines control 830 bytes, 8 lines md5sums Package: tracetuner-dbgsym Source: tracetuner Version: 3.0.6~beta+dfsg-3 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 1291 Depends: tracetuner (= 3.0.6~beta+dfsg-3) Section: debug Priority: optional Description: debug symbols for tracetuner Build-Ids: 12c1ef7c11805596189e8d19ad344cedda4a590e 275ce029e223dccdea3e2df0f764ecf9a59e9e78 3112fe770b0e9bb24b56d4ad6ff102e764efeed9 722139aec3a236d138ca7b6a6e3389349c4840d7 7890e3dab42c58333657e5df14865bb2224b36a2 9d529253d5e444a6f09231a525c9b55fdf424260 b26e81fff4515bc954908fe0e5866ce5ee00596c drwxr-xr-x root/root 0 2020-12-04 22:43 ./ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/lib/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/lib/debug/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2020-12-04 22:43 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2020-12-04 22:43 ./usr/lib/debug/.build-id/9d/529253d5e444a6f09231a525c9b55fdf424260.debug drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/lib/debug/.build-id/b2/ -rw-r--r-- root/root 376000 2020-12-04 22:43 ./usr/lib/debug/.build-id/b2/6e81fff4515bc954908fe0e5866ce5ee00596c.debug drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 33008 2020-12-04 22:43 ./usr/lib/debug/.dwz/aarch64-linux-gnu/tracetuner.debug drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/doc/ lrwxrwxrwx root/root 0 2020-12-04 22:43 ./usr/share/doc/tracetuner-dbgsym -> tracetuner tracetuner_3.0.6~beta+dfsg-3_arm64.deb -------------------------------------- new Debian package, version 2.0. size 319336 bytes: control archive=1984 bytes. 2476 bytes, 50 lines control 911 bytes, 15 lines md5sums Package: tracetuner Version: 3.0.6~beta+dfsg-3 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 1822 Depends: libc6 (>= 2.34) Section: science Priority: optional Homepage: https://sourceforge.net/projects/tracetuner/ Description: interpretation of DNA Sanger sequencing data Tracetuner is a tool for base and quality calling of trace files from DNA sequencing instruments. Traditional DNA sequencing yields curves from four different channels or light frequencies that human or (preferably) machines are interpreting to determine the actual base (A,C,G or T) and the confidence with which this is determined. . TraceTuner is a DNA sequencing quality value, base calling and trace processing software application originally developed by Paracel, Inc. While providing a flexible interface and capability to adopt the "pure" base calls produced by Phred, KB or any other "original" caller, it offers competitive features not currently available in other tools, such as customized calibration of quality values, advanced heterozygote and mixed base calling and deconvolving the "mixed" electropherograms resulting from the presence of indels into a couple of "pure" electropherograms. . Later versions Previous versions of TraceTuner were used by Celera Genomics to process over 27 million reads from both Drosophila and human genome projects. In 2000, Applied Biosystems bundled TraceTuner with ABI3700 Genome Analyzers and shipped it to the customers of these capillary electrophoresis sequencers. its SNP detection and genotyping software product SeqScape. . TraceTuner implements an advanced peak processing technology for resolving overlapping peaks of the same dye color into individual, or "intrinsic" peaks. TraceTuner, for its support of mixed base calling, have been used by the research community, the private biotech sector, and the U.S. government as components of different variant detection, genotyping and forensic software applications (e.g. Applied Biosystems SeqScape, Paracel Genome Assembler, MTexpert, etc.). . This technology was protected by US Patent #6,681,186. Currently, TraceTuner is an open source software, which has been used by J. Craig Venter Institute's DNA Sequencing and Resequencing pipelines. . This package prepares an important piece of human history to be used with new data on new machines or to revisit older observations.. drwxr-xr-x root/root 0 2020-12-04 22:43 ./ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/bin/ -rwxr-xr-x root/root 67672 2020-12-04 22:43 ./usr/bin/checkbc -rwxr-xr-x root/root 67672 2020-12-04 22:43 ./usr/bin/checkbcphd -rwxr-xr-x root/root 478608 2020-12-04 22:43 ./usr/bin/checkqv -rwxr-xr-x root/root 67672 2020-12-04 22:43 ./usr/bin/checkqvphd -rwxr-xr-x root/root 67672 2020-12-04 22:43 ./usr/bin/lut -rwxr-xr-x root/root 544136 2020-12-04 22:43 ./usr/bin/train -rwxr-xr-x root/root 544152 2020-12-04 22:43 ./usr/bin/ttuner drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/doc/tracetuner/ -rw-r--r-- root/root 497 2020-12-04 22:43 ./usr/share/doc/tracetuner/README.Debian -rw-r--r-- root/root 1671 2008-11-28 23:00 ./usr/share/doc/tracetuner/README.gz -rw-r--r-- root/root 1625 2009-06-30 13:16 ./usr/share/doc/tracetuner/RELEASE_NOTES.gz -rw-r--r-- root/root 413 2020-12-04 22:43 ./usr/share/doc/tracetuner/changelog.Debian.gz -rw-r--r-- root/root 1157 2020-12-04 22:43 ./usr/share/doc/tracetuner/copyright drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/man/ drwxr-xr-x root/root 0 2020-12-04 22:43 ./usr/share/man/man1/ -rw-r--r-- root/root 1059 2020-12-04 22:43 ./usr/share/man/man1/train.1.gz -rw-r--r-- root/root 961 2020-12-04 22:43 ./usr/share/man/man1/trainphd.1.gz -rw-r--r-- root/root 1341 2020-12-04 22:43 ./usr/share/man/man1/ttuner.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1308 B] Get:5 copy:/<>/apt_archive ./ Packages [1387 B] Fetched 3310 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:arm64 t1utils unzip 0 upgraded, 126 newly installed, 0 to remove and 0 not upgraded. Need to get 13.8 MB of archives. After this operation, 51.5 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [848 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.12-2 [1419 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.6-1 [49.9 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.44.0-1 [881 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.21-1 [95.6 kB] Get:29 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:30 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.60-1 [219 kB] Get:31 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:35 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:36 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:37 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.37-1 [131 kB] Get:42 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:43 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.59-1 [43.6 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:48 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:53 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:56 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:57 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:61 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:62 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:64 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:65 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.45-1 [82.0 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:72 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:73 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:74 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.083-1 [218 kB] Get:75 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.23-1 [23.9 kB] Get:76 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.11-1 [10.5 kB] Get:77 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.72-1 [187 kB] Get:79 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:80 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:81 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:82 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:83 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:84 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-6 [37.8 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:89 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:91 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:92 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:93 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:94 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:95 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:96 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:97 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:98 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.27-1 [12.5 kB] Get:100 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:101 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:102 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:104 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.636-1 [43.0 kB] Get:105 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.004+ds-1 [99.5 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.004+ds-1 [102 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:109 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.38-1 [60.0 kB] Get:110 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.29-1 [28.8 kB] Get:111 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:112 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:113 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:114 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:117 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:118 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.17-1 [116 kB] Get:119 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:121 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-6 [63.1 kB] Get:122 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:123 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:124 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:125 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:126 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.8 MB in 0s (81.0 MB/s) Selecting previously unselected package netbase. (Reading database ... 20772 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.12-2_amd64.deb ... Unpacking openssl (3.0.12-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.6-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.6-1) ... Selecting previously unselected package libreadline8:amd64. 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Preparing to unpack .../121-patchutils_0.4.2-1_amd64.deb ... Unpacking patchutils (0.4.2-1) ... Selecting previously unselected package t1utils. Preparing to unpack .../122-t1utils_1.41-4_amd64.deb ... Unpacking t1utils (1.41-4) ... Selecting previously unselected package unzip. Preparing to unpack .../123-unzip_6.0-28_amd64.deb ... Unpacking unzip (6.0-28) ... Selecting previously unselected package lintian. Preparing to unpack .../124-lintian_2.116.3_all.deb ... Unpacking lintian (2.116.3) ... Selecting previously unselected package sbuild-build-depends-lintian-dummy:arm64. Preparing to unpack .../125-sbuild-build-depends-lintian-dummy_0.invalid.0_arm64.deb ... Unpacking sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b2) ... Setting up liblz1:amd64 (1.13-6) ... Setting up libberkeleydb-perl:amd64 (0.64-2+b1) ... Setting up plzip (1.10-6) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.37-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:amd64 (3.44.0-1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.025-1) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.6-1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004005-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libxs-parse-keyword-perl (0.38-1) ... Setting up libipc-system-simple-perl (1.30-2) ... 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Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.083-1) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.60-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.59-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.72-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.17-1) ... Setting up liblwp-protocol-https-perl (6.11-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:arm64 (0.invalid.0) ... Processing triggers for libc-bin (2.37-12) ... Processing triggers for man-db (2.12.0-1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 12668 Build-Time: 17 Distribution: unstable Foreign Architectures: arm64 Host Architecture: arm64 Install-Time: 12 Job: tracetuner_3.0.6~beta+dfsg-3 Lintian: pass Machine Architecture: amd64 Package: tracetuner Package-Time: 42 Source-Version: 3.0.6~beta+dfsg-3 Space: 12668 Status: successful Version: 3.0.6~beta+dfsg-3 -------------------------------------------------------------------------------- Finished at 2023-11-09T14:12:46Z Build needed 00:00:42, 12668k disk space