sbuild (Debian sbuild) 0.78.1 (09 February 2019) on gcc131.bak.milne.osuosl.org +================================================================================+ | tvc 5.0.3+git20151221.80e144e+dfsg-4 (ppc64el) Sat, 27 Nov 2021 13:25:35 +0000 | +================================================================================+ Package: tvc Version: 5.0.3+git20151221.80e144e+dfsg-4 Source Version: 5.0.3+git20151221.80e144e+dfsg-4 Distribution: unstable Machine Architecture: amd64 Host Architecture: ppc64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/unstable-amd64-sbuild-7bdd4408-821f-4f99-bdb4-e2c26cad23b9' with '<>' I: NOTICE: Log filtering will replace 'build/tvc-5QojjA/resolver-rQVxoa' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://debian.oregonstate.edu/debian unstable InRelease [165 kB] Get:2 http://debian.oregonstate.edu/debian unstable/main Sources.diff/Index [63.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-11-27-0807.24-F-2021-11-27-0807.24.pdiff [5515 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-11-27-0807.24-F-2021-11-27-0807.24.pdiff [11.4 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main Sources T-2021-11-27-0807.24-F-2021-11-27-0807.24.pdiff [5515 B] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 Packages T-2021-11-27-0807.24-F-2021-11-27-0807.24.pdiff [11.4 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main ppc64el Packages [8710 kB] Fetched 9019 kB in 3s (3334 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'tvc' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/tvc.git Please use: git clone https://salsa.debian.org/med-team/tvc.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 756 kB of source archives. Get:1 http://debian.oregonstate.edu/debian unstable/main tvc 5.0.3+git20151221.80e144e+dfsg-4 (dsc) [2200 B] Get:2 http://debian.oregonstate.edu/debian unstable/main tvc 5.0.3+git20151221.80e144e+dfsg-4 (tar) [745 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main tvc 5.0.3+git20151221.80e144e+dfsg-4 (diff) [9248 B] Fetched 756 kB in 0s (39.3 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/tvc-5QojjA/tvc-5.0.3+git20151221.80e144e+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/tvc-5QojjA' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), cmake, libbamtools-dev, libjsoncpp-dev, libarmadillo-dev, libboost-math-dev, libsmithwaterman-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el Filtered Build-Depends: debhelper-compat (= 12), cmake, libbamtools-dev, libjsoncpp-dev, libarmadillo-dev, libboost-math-dev, libsmithwaterman-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-ppc64el:amd64, libc-dev:ppc64el, libstdc++-dev:ppc64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [445 B] Get:5 copy:/<>/apt_archive ./ Packages [539 B] Fetched 1941 B in 0s (78.5 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils build-essential cmake cmake-data cpp-11-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dpkg-cross dpkg-dev dwz emacsen-common file g++ g++-11 g++-11-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-11-cross-base gcc-11-powerpc64le-linux-gnu gcc-11-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base hdf5-helpers:ppc64el intltool-debian libaec-dev:ppc64el libaec0:ppc64el libarchive-zip-perl libarchive13 libarmadillo-dev:ppc64el libarmadillo10:ppc64el libarpack2:ppc64el libarpack2-dev:ppc64el libasan6:ppc64el libasan6-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbamtools-dev:ppc64el libbamtools2.5.1:ppc64el libblas-dev:ppc64el libblas3:ppc64el libboost-math-dev:ppc64el libboost-math1.74-dev:ppc64el libboost-math1.74.0:ppc64el libboost1.74-dev:ppc64el libbrotli1 libbrotli1:ppc64el libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl4 libcurl4:ppc64el libcurl4-openssl-dev:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdisorder-dev:ppc64el libdisorder0:ppc64el libdpkg-perl libelf1 libexpat1 libffi8:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-11-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgfortran5:ppc64el libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libhdf5-103-1:ppc64el libhdf5-cpp-103-1:ppc64el libhdf5-dev:ppc64el libhdf5-fortran-102:ppc64el libhdf5-hl-100:ppc64el libhdf5-hl-cpp-100:ppc64el libhdf5-hl-fortran-100:ppc64el libhogweed6:ppc64el libicu67 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libjpeg-dev:ppc64el libjpeg62-turbo:ppc64el libjpeg62-turbo-dev:ppc64el libjsoncpp-dev:ppc64el libjsoncpp24 libjsoncpp24:ppc64el libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el liblapack-dev:ppc64el liblapack3:ppc64el libldap-2.4-2 libldap-2.4-2:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libncurses6 libnettle8:ppc64el libnghttp2-14 libnghttp2-14:ppc64el libnsl-dev libnsl-dev:ppc64el libnsl2:ppc64el libp11-kit0:ppc64el libperl5.32 libpipeline1 libprocps8 libpsl5 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librhash0 librtmp1 librtmp1:ppc64el libsasl2-2 libsasl2-2:ppc64el libsasl2-modules-db libsasl2-modules-db:ppc64el libsigsegv2 libsmithwaterman-dev:ppc64el libsmithwaterman0:ppc64el libssh2-1 libssh2-1:ppc64el libssl-dev:ppc64el libssl1.1:ppc64el libstdc++-11-dev libstdc++-11-dev:ppc64el libstdc++-11-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libsuperlu-dev:ppc64el libsuperlu5:ppc64el libsz2:ppc64el libtasn1-6:ppc64el libtirpc-dev libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db perl perl-modules-5.32 po-debconf procps rpcsvc-proto sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc cmake-doc ninja-build gcc-11-locales cpp-doc dh-make binutils-multiarch debian-keyring g++-multilib g++-11-multilib gcc-11-doc manpages-dev flex bison gdb-powerpc64le-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff lrzip libitpp-dev:ppc64el libbamtools-doc:ppc64el liblapack-doc:ppc64el libboost1.74-doc:ppc64el libboost-atomic1.74-dev:ppc64el libboost-chrono1.74-dev:ppc64el libboost-container1.74-dev:ppc64el libboost-context1.74-dev:ppc64el libboost-contract1.74-dev:ppc64el libboost-coroutine1.74-dev:ppc64el libboost-date-time1.74-dev:ppc64el libboost-exception1.74-dev:ppc64el libboost-fiber1.74-dev:ppc64el libboost-filesystem1.74-dev:ppc64el libboost-graph1.74-dev:ppc64el libboost-graph-parallel1.74-dev:ppc64el libboost-iostreams1.74-dev:ppc64el libboost-locale1.74-dev:ppc64el libboost-log1.74-dev:ppc64el libboost-mpi1.74-dev:ppc64el libboost-mpi-python1.74-dev:ppc64el libboost-numpy1.74-dev:ppc64el libboost-program-options1.74-dev:ppc64el libboost-python1.74-dev:ppc64el libboost-random1.74-dev:ppc64el libboost-regex1.74-dev:ppc64el libboost-serialization1.74-dev:ppc64el libboost-stacktrace1.74-dev:ppc64el libboost-system1.74-dev:ppc64el libboost-test1.74-dev:ppc64el libboost-thread1.74-dev:ppc64el libboost-timer1.74-dev:ppc64el libboost-type-erasure1.74-dev:ppc64el libboost-wave1.74-dev:ppc64el libboost1.74-tools-dev:ppc64el libmpfrc++-dev:ppc64el libntl-dev:ppc64el libboost-nowide1.74-dev:ppc64el glibc-doc:ppc64el libc-l10n:ppc64el locales:ppc64el libnss-nis:ppc64el libnss-nisplus:ppc64el glibc-doc manpages-dev:ppc64el libcurl4-doc:ppc64el libidn11-dev:ppc64el libkrb5-dev:ppc64el libldap2-dev:ppc64el librtmp-dev:ppc64el libssh2-1-dev:ppc64el pkg-config:ppc64el gnupg git bzr gnutls-bin:ppc64el krb5-doc:ppc64el krb5-user:ppc64el libhdf5-doc:ppc64el libssl-doc:ppc64el libstdc++-11-doc libstdc++-11-doc:ppc64el libsuperlu-doc:ppc64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl libtap-harness-archive-perl libmail-box-perl Recommended packages: gnupg libalgorithm-merge-perl curl | wget | lynx ca-certificates ca-certificates:ppc64el libfile-fcntllock-perl libarchive-cpio-perl krb5-locales:ppc64el libldap-common libldap-common:ppc64el libgpm2 publicsuffix publicsuffix:ppc64el libsasl2-modules libsasl2-modules:ppc64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl netbase libmail-sendmail-perl psmisc The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-powerpc64le-linux-gnu bsdextrautils build-essential cmake cmake-data cpp-11-powerpc64le-linux-gnu cpp-powerpc64le-linux-gnu cross-config crossbuild-essential-ppc64el debhelper dh-autoreconf dh-elpa-helper dh-strip-nondeterminism dpkg-cross dpkg-dev dwz emacsen-common file g++ g++-11 g++-11-powerpc64le-linux-gnu g++-powerpc64le-linux-gnu gcc-11-base:ppc64el gcc-11-cross-base gcc-11-powerpc64le-linux-gnu gcc-11-powerpc64le-linux-gnu-base gcc-powerpc64le-linux-gnu gettext gettext-base groff-base hdf5-helpers:ppc64el intltool-debian libaec-dev:ppc64el libaec0:ppc64el libarchive-zip-perl libarchive13 libarmadillo-dev:ppc64el libarmadillo10:ppc64el libarpack2:ppc64el libarpack2-dev:ppc64el libasan6:ppc64el libasan6-ppc64el-cross libatomic1:ppc64el libatomic1-ppc64el-cross libbamtools-dev:ppc64el libbamtools2.5.1:ppc64el libblas-dev:ppc64el libblas3:ppc64el libboost-math-dev:ppc64el libboost-math1.74-dev:ppc64el libboost-math1.74.0:ppc64el libboost1.74-dev:ppc64el libbrotli1 libbrotli1:ppc64el libc6:ppc64el libc6-dev libc6-dev:ppc64el libc6-dev-ppc64el-cross libc6-ppc64el-cross libcom-err2:ppc64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev libcrypt-dev:ppc64el libcrypt1:ppc64el libcurl4 libcurl4:ppc64el libcurl4-openssl-dev:ppc64el libdb5.3:ppc64el libdebhelper-perl libdebian-dpkgcross-perl libdisorder-dev:ppc64el libdisorder0:ppc64el libdpkg-perl libelf1 libexpat1 libffi8:ppc64el libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:ppc64el libgcc-11-dev-ppc64el-cross libgcc-s1:ppc64el libgcc-s1-ppc64el-cross libgfortran5:ppc64el libgmp10:ppc64el libgnutls30:ppc64el libgomp1:ppc64el libgomp1-ppc64el-cross libgssapi-krb5-2:ppc64el libhdf5-103-1:ppc64el libhdf5-cpp-103-1:ppc64el libhdf5-dev:ppc64el libhdf5-fortran-102:ppc64el libhdf5-hl-100:ppc64el libhdf5-hl-cpp-100:ppc64el libhdf5-hl-fortran-100:ppc64el libhogweed6:ppc64el libicu67 libidn2-0:ppc64el libio-string-perl libitm1:ppc64el libitm1-ppc64el-cross libjpeg-dev:ppc64el libjpeg62-turbo:ppc64el libjpeg62-turbo-dev:ppc64el libjsoncpp-dev:ppc64el libjsoncpp24 libjsoncpp24:ppc64el libk5crypto3:ppc64el libkeyutils1:ppc64el libkrb5-3:ppc64el libkrb5support0:ppc64el liblapack-dev:ppc64el liblapack3:ppc64el libldap-2.4-2 libldap-2.4-2:ppc64el liblocale-gettext-perl liblsan0:ppc64el liblsan0-ppc64el-cross libmagic-mgc libmagic1 libncurses6 libnettle8:ppc64el libnghttp2-14 libnghttp2-14:ppc64el libnsl-dev libnsl-dev:ppc64el libnsl2:ppc64el libp11-kit0:ppc64el libperl5.32 libpipeline1 libprocps8 libpsl5 libpsl5:ppc64el libquadmath0:ppc64el libquadmath0-ppc64el-cross librhash0 librtmp1 librtmp1:ppc64el libsasl2-2 libsasl2-2:ppc64el libsasl2-modules-db libsasl2-modules-db:ppc64el libsigsegv2 libsmithwaterman-dev:ppc64el libsmithwaterman0:ppc64el libssh2-1 libssh2-1:ppc64el libssl-dev:ppc64el libssl1.1:ppc64el libstdc++-11-dev libstdc++-11-dev:ppc64el libstdc++-11-dev-ppc64el-cross libstdc++6:ppc64el libstdc++6-ppc64el-cross libsub-override-perl libsuperlu-dev:ppc64el libsuperlu5:ppc64el libsz2:ppc64el libtasn1-6:ppc64el libtirpc-dev libtirpc-dev:ppc64el libtirpc3:ppc64el libtool libtsan0:ppc64el libtsan0-ppc64el-cross libubsan1:ppc64el libubsan1-ppc64el-cross libuchardet0 libunistring2:ppc64el libuv1 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:ppc64el linux-libc-dev-ppc64el-cross m4 man-db perl perl-modules-5.32 po-debconf procps rpcsvc-proto sbuild-build-depends-main-dummy:ppc64el sensible-utils ucf zlib1g:ppc64el zlib1g-dev:ppc64el 0 upgraded, 197 newly installed, 0 to remove and 0 not upgraded. Need to get 281 MB of archives. After this operation, 1185 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [960 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 bsdextrautils amd64 2.37.2-4 [143 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 groff-base amd64 1.22.4-7 [935 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libpipeline1 amd64 1.5.4-1 [36.2 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 perl-modules-5.32 all 5.32.1-6 [2824 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libperl5.32 amd64 5.32.1-6 [4106 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 perl amd64 5.32.1-6 [293 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main ppc64el gcc-11-base ppc64el 11.2.0-12 [206 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libncurses6 amd64 6.3-1 [102 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libprocps8 amd64 2:3.3.17-5 [63.9 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 procps amd64 2:3.3.17-5 [502 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 sensible-utils all 0.0.17 [21.5 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic-mgc amd64 1:5.41-2 [295 kB] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libmagic1 amd64 1:5.41-2 [129 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 file amd64 1:5.41-2 [66.9 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 gettext-base amd64 0.21-4 [175 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 ucf all 3.0043 [74.0 kB] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 m4 amd64 1.4.18-5 [204 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 autoconf all 2.71-2 [343 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 automake all 1:1.16.5-1.1 [823 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 autopoint all 0.21-4 [510 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 binutils-powerpc64le-linux-gnu amd64 2.37-10 [2666 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.26-1 [104 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libtirpc-dev amd64 1.3.2-2 [190 kB] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libnsl-dev amd64 1.3.0-2 [66.4 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 rpcsvc-proto amd64 1.4.2-4 [63.1 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev amd64 2.32-4 [2251 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev amd64 11.2.0-12 [1973 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11 amd64 11.2.0-12 [10.2 MB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 g++ amd64 4:11.2.0-2 [1636 B] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 libdpkg-perl all 1.20.9 [1537 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-dev all 1.20.9 [2153 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 build-essential amd64 12.9 [7704 B] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libxml2 amd64 2.9.12+dfsg-5+b1 [701 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive13 amd64 3.4.3-2+b1 [343 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libbrotli1 amd64 1.0.9-2+b3 [276 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg2-2 [74.1 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libsasl2-2 amd64 2.1.27+dfsg2-2 [110 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libldap-2.4-2 amd64 2.4.59+dfsg-1 [232 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libnghttp2-14 amd64 1.43.0-1 [77.1 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libssh2-1 amd64 1.10.0-2 [178 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libcurl4 amd64 7.79.1-2 [360 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libexpat1 amd64 2.4.1-3 [104 kB] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libjsoncpp24 amd64 1.9.4-5 [78.8 kB] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 librhash0 amd64 1.4.2-1 [129 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libuv1 amd64 1.42.0-1 [135 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 dh-elpa-helper all 2.0.9 [11.2 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 emacsen-common all 3.0.4 [19.3 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 cmake-data all 3.22.0-1 [1902 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 cmake amd64 3.22.0-1 [7988 kB] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-powerpc64le-linux-gnu-base amd64 11.2.0-9cross1 [206 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-11-powerpc64le-linux-gnu amd64 11.2.0-9cross1 [47.6 MB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 cpp-powerpc64le-linux-gnu amd64 4:11.2.0-2 [17.0 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 cross-config all 2.6.18+nmu2 [31.7 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-cross-base all 11.2.0-9cross1 [201 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-ppc64el-cross all 2.32-1cross4 [1547 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-s1-ppc64el-cross all 11.2.0-9cross1 [31.1 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 libgomp1-ppc64el-cross all 11.2.0-9cross1 [111 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libitm1-ppc64el-cross all 11.2.0-9cross1 [28.5 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libatomic1-ppc64el-cross all 11.2.0-9cross1 [9696 B] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libasan6-ppc64el-cross all 11.2.0-9cross1 [2030 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 liblsan0-ppc64el-cross all 11.2.0-9cross1 [899 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libtsan0-ppc64el-cross all 11.2.0-9cross1 [2014 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++6-ppc64el-cross all 11.2.0-9cross1 [614 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libubsan1-ppc64el-cross all 11.2.0-9cross1 [851 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libquadmath0-ppc64el-cross all 11.2.0-9cross1 [150 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libgcc-11-dev-ppc64el-cross all 11.2.0-9cross1 [1270 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-11-powerpc64le-linux-gnu amd64 11.2.0-9cross1 [54.1 MB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 gcc-powerpc64le-linux-gnu amd64 4:11.2.0-2 [1468 B] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 linux-libc-dev-ppc64el-cross all 5.10.46-4cross4 [1463 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libc6-dev-ppc64el-cross all 2.32-1cross4 [2286 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libstdc++-11-dev-ppc64el-cross all 11.2.0-9cross1 [2043 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 g++-11-powerpc64le-linux-gnu amd64 11.2.0-9cross1 [51.8 MB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 g++-powerpc64le-linux-gnu amd64 4:11.2.0-2 [1184 B] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-inifiles-perl all 3.000003-1 [52.1 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-libxml-perl amd64 2.0134+dfsg-2+b1 [337 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libxml-simple-perl all 2.25-1 [72.0 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-perl all 1.30-1 [67.7 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-auto-perl all 0.44-1.1 [19.0 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-homedir-perl all 1.006-1 [43.8 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 libdebian-dpkgcross-perl all 2.6.18+nmu2 [30.6 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 dpkg-cross all 2.6.18+nmu2 [40.9 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 crossbuild-essential-ppc64el all 12.9 [6716 B] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 libdebhelper-perl all 13.5.2 [192 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 libtool all 2.4.6-15 [513 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.12.1-1 [26.5 kB] Get:103 http://debian.oregonstate.edu/debian unstable/main amd64 dh-strip-nondeterminism all 1.12.1-1 [15.6 kB] Get:104 http://debian.oregonstate.edu/debian unstable/main amd64 libelf1 amd64 0.186-1 [179 kB] Get:105 http://debian.oregonstate.edu/debian unstable/main amd64 dwz amd64 0.14-1 [98.3 kB] Get:106 http://debian.oregonstate.edu/debian unstable/main amd64 gettext amd64 0.21-4 [1311 kB] Get:107 http://debian.oregonstate.edu/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get:108 http://debian.oregonstate.edu/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:109 http://debian.oregonstate.edu/debian unstable/main amd64 debhelper all 13.5.2 [1056 kB] Get:110 http://debian.oregonstate.edu/debian unstable/main ppc64el hdf5-helpers ppc64el 1.10.7+repack-4 [42.8 kB] Get:111 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-s1 ppc64el 11.2.0-12 [31.0 kB] Get:112 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6 ppc64el 2.32-4 [2847 kB] Get:113 http://debian.oregonstate.edu/debian unstable/main ppc64el libaec0 ppc64el 1.0.6-1 [22.5 kB] Get:114 http://debian.oregonstate.edu/debian unstable/main ppc64el libsz2 ppc64el 1.0.6-1 [7816 B] Get:115 http://debian.oregonstate.edu/debian unstable/main ppc64el libaec-dev ppc64el 1.0.6-1 [21.8 kB] Get:116 http://debian.oregonstate.edu/debian unstable/main ppc64el libblas3 ppc64el 3.10.0-1 [120 kB] Get:117 http://debian.oregonstate.edu/debian unstable/main ppc64el libgfortran5 ppc64el 11.2.0-12 [429 kB] Get:118 http://debian.oregonstate.edu/debian unstable/main ppc64el liblapack3 ppc64el 3.10.0-1 [1710 kB] Get:119 http://debian.oregonstate.edu/debian unstable/main ppc64el libarpack2 ppc64el 3.8.0-1 [90.8 kB] Get:120 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++6 ppc64el 11.2.0-12 [657 kB] Get:121 http://debian.oregonstate.edu/debian unstable/main ppc64el libsuperlu5 ppc64el 5.3.0+dfsg1-2 [170 kB] Get:122 http://debian.oregonstate.edu/debian unstable/main ppc64el libarmadillo10 ppc64el 1:10.7.4+dfsg-1 [106 kB] Get:123 http://debian.oregonstate.edu/debian unstable/main ppc64el libblas-dev ppc64el 3.10.0-1 [127 kB] Get:124 http://debian.oregonstate.edu/debian unstable/main ppc64el liblapack-dev ppc64el 3.10.0-1 [3450 kB] Get:125 http://debian.oregonstate.edu/debian unstable/main ppc64el libarpack2-dev ppc64el 3.8.0-1 [111 kB] Get:126 http://debian.oregonstate.edu/debian unstable/main ppc64el libbrotli1 ppc64el 1.0.9-2+b3 [286 kB] Get:127 http://debian.oregonstate.edu/debian unstable/main ppc64el libcom-err2 ppc64el 1.46.4-1 [75.8 kB] Get:128 http://debian.oregonstate.edu/debian unstable/main ppc64el libkrb5support0 ppc64el 1.18.3-7 [68.8 kB] Get:129 http://debian.oregonstate.edu/debian unstable/main ppc64el libk5crypto3 ppc64el 1.18.3-7 [125 kB] Get:130 http://debian.oregonstate.edu/debian unstable/main ppc64el libkeyutils1 ppc64el 1.6.1-2 [16.7 kB] Get:131 http://debian.oregonstate.edu/debian unstable/main ppc64el libssl1.1 ppc64el 1.1.1l-1 [1542 kB] Get:132 http://debian.oregonstate.edu/debian unstable/main ppc64el libkrb5-3 ppc64el 1.18.3-7 [392 kB] Get:133 http://debian.oregonstate.edu/debian unstable/main ppc64el libgssapi-krb5-2 ppc64el 1.18.3-7 [179 kB] Get:134 http://debian.oregonstate.edu/debian unstable/main ppc64el libunistring2 ppc64el 0.9.10-6 [394 kB] Get:135 http://debian.oregonstate.edu/debian unstable/main ppc64el libidn2-0 ppc64el 2.3.2-2 [97.9 kB] Get:136 http://debian.oregonstate.edu/debian unstable/main ppc64el libgmp10 ppc64el 2:6.2.1+dfsg-3 [574 kB] Get:137 http://debian.oregonstate.edu/debian unstable/main ppc64el libnettle8 ppc64el 3.7.3-1 [297 kB] Get:138 http://debian.oregonstate.edu/debian unstable/main ppc64el libhogweed6 ppc64el 3.7.3-1 [324 kB] Get:139 http://debian.oregonstate.edu/debian unstable/main ppc64el libffi8 ppc64el 3.4.2-3 [26.9 kB] Get:140 http://debian.oregonstate.edu/debian unstable/main ppc64el libp11-kit0 ppc64el 0.24.0-5 [346 kB] Get:141 http://debian.oregonstate.edu/debian unstable/main ppc64el libtasn1-6 ppc64el 4.18.0-4 [61.0 kB] Get:142 http://debian.oregonstate.edu/debian unstable/main ppc64el libgnutls30 ppc64el 3.7.2-2 [1325 kB] Get:143 http://debian.oregonstate.edu/debian unstable/main ppc64el libdb5.3 ppc64el 5.3.28+dfsg1-0.8 [722 kB] Get:144 http://debian.oregonstate.edu/debian unstable/main ppc64el libsasl2-modules-db ppc64el 2.1.27+dfsg2-2 [76.3 kB] Get:145 http://debian.oregonstate.edu/debian unstable/main ppc64el libsasl2-2 ppc64el 2.1.27+dfsg2-2 [121 kB] Get:146 http://debian.oregonstate.edu/debian unstable/main ppc64el libldap-2.4-2 ppc64el 2.4.59+dfsg-1 [249 kB] Get:147 http://debian.oregonstate.edu/debian unstable/main ppc64el libnghttp2-14 ppc64el 1.43.0-1 [85.0 kB] Get:148 http://debian.oregonstate.edu/debian unstable/main ppc64el libpsl5 ppc64el 0.21.0-1.2 [59.3 kB] Get:149 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g ppc64el 1:1.2.11.dfsg-2 [94.7 kB] Get:150 http://debian.oregonstate.edu/debian unstable/main ppc64el librtmp1 ppc64el 2.4+20151223.gitfa8646d.1-2+b2 [65.9 kB] Get:151 http://debian.oregonstate.edu/debian unstable/main ppc64el libssh2-1 ppc64el 1.10.0-2 [188 kB] Get:152 http://debian.oregonstate.edu/debian unstable/main ppc64el libcurl4 ppc64el 7.79.1-2 [377 kB] Get:153 http://debian.oregonstate.edu/debian unstable/main ppc64el libhdf5-103-1 ppc64el 1.10.7+repack-4 [1155 kB] Get:154 http://debian.oregonstate.edu/debian unstable/main ppc64el libhdf5-fortran-102 ppc64el 1.10.7+repack-4 [115 kB] Get:155 http://debian.oregonstate.edu/debian unstable/main ppc64el libhdf5-hl-100 ppc64el 1.10.7+repack-4 [92.7 kB] Get:156 http://debian.oregonstate.edu/debian unstable/main ppc64el libhdf5-hl-fortran-100 ppc64el 1.10.7+repack-4 [61.1 kB] Get:157 http://debian.oregonstate.edu/debian unstable/main ppc64el libhdf5-cpp-103-1 ppc64el 1.10.7+repack-4 [142 kB] Get:158 http://debian.oregonstate.edu/debian unstable/main ppc64el libhdf5-hl-cpp-100 ppc64el 1.10.7+repack-4 [40.6 kB] Get:159 http://debian.oregonstate.edu/debian unstable/main ppc64el linux-libc-dev ppc64el 5.15.5-1 [1450 kB] Get:160 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt1 ppc64el 1:4.4.26-1 [97.4 kB] Get:161 http://debian.oregonstate.edu/debian unstable/main ppc64el libcrypt-dev ppc64el 1:4.4.26-1 [118 kB] Get:162 http://debian.oregonstate.edu/debian unstable/main ppc64el libtirpc3 ppc64el 1.3.2-2 [95.4 kB] Get:163 http://debian.oregonstate.edu/debian unstable/main ppc64el libnsl2 ppc64el 1.3.0-2 [44.8 kB] Get:164 http://debian.oregonstate.edu/debian unstable/main ppc64el libtirpc-dev ppc64el 1.3.2-2 [209 kB] Get:165 http://debian.oregonstate.edu/debian unstable/main ppc64el libnsl-dev ppc64el 1.3.0-2 [73.6 kB] Get:166 http://debian.oregonstate.edu/debian unstable/main ppc64el libc6-dev ppc64el 2.32-4 [2295 kB] Get:167 http://debian.oregonstate.edu/debian unstable/main ppc64el zlib1g-dev ppc64el 1:1.2.11.dfsg-2 [195 kB] Get:168 http://debian.oregonstate.edu/debian unstable/main ppc64el libjpeg62-turbo ppc64el 1:2.1.2-1 [170 kB] Get:169 http://debian.oregonstate.edu/debian unstable/main ppc64el libjpeg62-turbo-dev ppc64el 1:2.1.2-1 [294 kB] Get:170 http://debian.oregonstate.edu/debian unstable/main ppc64el libjpeg-dev ppc64el 1:2.1.2-1 [74.7 kB] Get:171 http://debian.oregonstate.edu/debian unstable/main ppc64el libcurl4-openssl-dev ppc64el 7.79.1-2 [482 kB] Get:172 http://debian.oregonstate.edu/debian unstable/main ppc64el libssl-dev ppc64el 1.1.1l-1 [1842 kB] Get:173 http://debian.oregonstate.edu/debian unstable/main ppc64el libhdf5-dev ppc64el 1.10.7+repack-4 [2730 kB] Get:174 http://debian.oregonstate.edu/debian unstable/main ppc64el libsuperlu-dev ppc64el 5.3.0+dfsg1-2 [22.1 kB] Get:175 http://debian.oregonstate.edu/debian unstable/main ppc64el libarmadillo-dev ppc64el 1:10.7.4+dfsg-1 [401 kB] Get:176 http://debian.oregonstate.edu/debian unstable/main ppc64el libasan6 ppc64el 11.2.0-12 [2034 kB] Get:177 http://debian.oregonstate.edu/debian unstable/main ppc64el libatomic1 ppc64el 11.2.0-12 [9880 B] Get:178 http://debian.oregonstate.edu/debian unstable/main ppc64el libbamtools2.5.1 ppc64el 2.5.1+dfsg-10 [169 kB] Get:179 http://debian.oregonstate.edu/debian unstable/main ppc64el libbamtools-dev ppc64el 2.5.1+dfsg-10 [223 kB] Get:180 http://debian.oregonstate.edu/debian unstable/main ppc64el libgomp1 ppc64el 11.2.0-12 [113 kB] Get:181 http://debian.oregonstate.edu/debian unstable/main ppc64el libitm1 ppc64el 11.2.0-12 [28.9 kB] Get:182 http://debian.oregonstate.edu/debian unstable/main ppc64el liblsan0 ppc64el 11.2.0-12 [899 kB] Get:183 http://debian.oregonstate.edu/debian unstable/main ppc64el libtsan0 ppc64el 11.2.0-12 [2022 kB] Get:184 http://debian.oregonstate.edu/debian unstable/main ppc64el libubsan1 ppc64el 11.2.0-12 [852 kB] Get:185 http://debian.oregonstate.edu/debian unstable/main ppc64el libquadmath0 ppc64el 11.2.0-12 [150 kB] Get:186 http://debian.oregonstate.edu/debian unstable/main ppc64el libgcc-11-dev ppc64el 11.2.0-12 [1270 kB] Get:187 http://debian.oregonstate.edu/debian unstable/main ppc64el libstdc++-11-dev ppc64el 11.2.0-12 [2078 kB] Get:188 http://debian.oregonstate.edu/debian unstable/main ppc64el libboost1.74-dev ppc64el 1.74.0-13 [9537 kB] Get:189 http://debian.oregonstate.edu/debian unstable/main ppc64el libboost-math1.74.0 ppc64el 1.74.0-13 [565 kB] Get:190 http://debian.oregonstate.edu/debian unstable/main ppc64el libboost-math1.74-dev ppc64el 1.74.0-13 [665 kB] Get:191 http://debian.oregonstate.edu/debian unstable/main ppc64el libboost-math-dev ppc64el 1.74.0.3 [4536 B] Get:192 http://debian.oregonstate.edu/debian unstable/main ppc64el libdisorder0 ppc64el 0.0.2+git20130809.8062ee1-4 [5012 B] Get:193 http://debian.oregonstate.edu/debian unstable/main ppc64el libdisorder-dev ppc64el 0.0.2+git20130809.8062ee1-4 [4764 B] Get:194 http://debian.oregonstate.edu/debian unstable/main ppc64el libjsoncpp24 ppc64el 1.9.4-5 [82.0 kB] Get:195 http://debian.oregonstate.edu/debian unstable/main ppc64el libjsoncpp-dev ppc64el 1.9.4-5 [25.7 kB] Get:196 http://debian.oregonstate.edu/debian unstable/main ppc64el libsmithwaterman0 ppc64el 0.0+git20160702.2610e25-12 [36.9 kB] Get:197 http://debian.oregonstate.edu/debian unstable/main ppc64el libsmithwaterman-dev ppc64el 0.0+git20160702.2610e25-12 [42.0 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 281 MB in 2s (125 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 10568 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.37.2-4_amd64.deb ... Unpacking bsdextrautils (2.37.2-4) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-7_amd64.deb ... Unpacking groff-base (1.22.4-7) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.4-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.4-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package perl-modules-5.32. Preparing to unpack .../005-perl-modules-5.32_5.32.1-6_all.deb ... Unpacking perl-modules-5.32 (5.32.1-6) ... Selecting previously unselected package libperl5.32:amd64. Preparing to unpack .../006-libperl5.32_5.32.1-6_amd64.deb ... Unpacking libperl5.32:amd64 (5.32.1-6) ... Selecting previously unselected package perl. Preparing to unpack .../007-perl_5.32.1-6_amd64.deb ... Unpacking perl (5.32.1-6) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../008-liblocale-gettext-perl_1.07-4+b1_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-4+b1) ... Selecting previously unselected package gcc-11-base:ppc64el. Preparing to unpack .../009-gcc-11-base_11.2.0-12_ppc64el.deb ... Unpacking gcc-11-base:ppc64el (11.2.0-12) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../010-libncurses6_6.3-1_amd64.deb ... Unpacking libncurses6:amd64 (6.3-1) ... Selecting previously unselected package libprocps8:amd64. Preparing to unpack .../011-libprocps8_2%3a3.3.17-5_amd64.deb ... Unpacking libprocps8:amd64 (2:3.3.17-5) ... 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Selecting previously unselected package libgssapi-krb5-2:ppc64el. Preparing to unpack .../131-libgssapi-krb5-2_1.18.3-7_ppc64el.deb ... Unpacking libgssapi-krb5-2:ppc64el (1.18.3-7) ... Selecting previously unselected package libunistring2:ppc64el. Preparing to unpack .../132-libunistring2_0.9.10-6_ppc64el.deb ... Unpacking libunistring2:ppc64el (0.9.10-6) ... Selecting previously unselected package libidn2-0:ppc64el. Preparing to unpack .../133-libidn2-0_2.3.2-2_ppc64el.deb ... Unpacking libidn2-0:ppc64el (2.3.2-2) ... Selecting previously unselected package libgmp10:ppc64el. Preparing to unpack .../134-libgmp10_2%3a6.2.1+dfsg-3_ppc64el.deb ... Unpacking libgmp10:ppc64el (2:6.2.1+dfsg-3) ... Selecting previously unselected package libnettle8:ppc64el. Preparing to unpack .../135-libnettle8_3.7.3-1_ppc64el.deb ... Unpacking libnettle8:ppc64el (3.7.3-1) ... Selecting previously unselected package libhogweed6:ppc64el. Preparing to unpack .../136-libhogweed6_3.7.3-1_ppc64el.deb ... 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Selecting previously unselected package libhdf5-hl-100:ppc64el. Preparing to unpack .../153-libhdf5-hl-100_1.10.7+repack-4_ppc64el.deb ... Unpacking libhdf5-hl-100:ppc64el (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-hl-fortran-100:ppc64el. Preparing to unpack .../154-libhdf5-hl-fortran-100_1.10.7+repack-4_ppc64el.deb ... Unpacking libhdf5-hl-fortran-100:ppc64el (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-cpp-103-1:ppc64el. Preparing to unpack .../155-libhdf5-cpp-103-1_1.10.7+repack-4_ppc64el.deb ... Unpacking libhdf5-cpp-103-1:ppc64el (1.10.7+repack-4) ... Selecting previously unselected package libhdf5-hl-cpp-100:ppc64el. Preparing to unpack .../156-libhdf5-hl-cpp-100_1.10.7+repack-4_ppc64el.deb ... Unpacking libhdf5-hl-cpp-100:ppc64el (1.10.7+repack-4) ... Selecting previously unselected package linux-libc-dev:ppc64el. Preparing to unpack .../157-linux-libc-dev_5.15.5-1_ppc64el.deb ... 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Unpacking libjpeg-dev:ppc64el (1:2.1.2-1) ... Selecting previously unselected package libcurl4-openssl-dev:ppc64el. Preparing to unpack .../169-libcurl4-openssl-dev_7.79.1-2_ppc64el.deb ... Unpacking libcurl4-openssl-dev:ppc64el (7.79.1-2) ... Selecting previously unselected package libssl-dev:ppc64el. Preparing to unpack .../170-libssl-dev_1.1.1l-1_ppc64el.deb ... Unpacking libssl-dev:ppc64el (1.1.1l-1) ... Selecting previously unselected package libhdf5-dev:ppc64el. Preparing to unpack .../171-libhdf5-dev_1.10.7+repack-4_ppc64el.deb ... Unpacking libhdf5-dev:ppc64el (1.10.7+repack-4) ... Selecting previously unselected package libsuperlu-dev:ppc64el. Preparing to unpack .../172-libsuperlu-dev_5.3.0+dfsg1-2_ppc64el.deb ... Unpacking libsuperlu-dev:ppc64el (5.3.0+dfsg1-2) ... Selecting previously unselected package libarmadillo-dev:ppc64el. Preparing to unpack .../173-libarmadillo-dev_1%3a10.7.4+dfsg-1_ppc64el.deb ... Unpacking libarmadillo-dev:ppc64el (1:10.7.4+dfsg-1) ... 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Setting up libmagic-mgc (1:5.41-2) ... Setting up libc6-ppc64el-cross (2.32-1cross4) ... Setting up perl-modules-5.32 (5.32.1-6) ... Setting up libbrotli1:amd64 (1.0.9-2+b3) ... Setting up libnghttp2-14:amd64 (1.43.0-1) ... Setting up libmagic1:amd64 (1:5.41-2) ... Setting up linux-libc-dev:ppc64el (5.15.5-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.41-2) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg2-2) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up cross-config (2.6.18+nmu2) ... Setting up libtirpc-dev:amd64 (1.3.2-2) ... Setting up libuv1:amd64 (1.42.0-1) ... Setting up rpcsvc-proto (1.4.2-4) ... Setting up emacsen-common (3.0.4) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up dh-elpa-helper (2.0.9) ... Setting up libncurses6:amd64 (6.3-1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up gcc-11-powerpc64le-linux-gnu-base:amd64 (11.2.0-9cross1) ... Setting up autopoint (0.21-4) ... Setting up libperl5.32:amd64 (5.32.1-6) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg2-2) ... Setting up libjsoncpp24:amd64 (1.9.4-5) ... Setting up gcc-11-cross-base (11.2.0-9cross1) ... Setting up libatomic1-ppc64el-cross (11.2.0-9cross1) ... Setting up libnsl-dev:amd64 (1.3.0-2) ... Setting up sensible-utils (0.0.17) ... Setting up librhash0:amd64 (1.4.2-1) ... Setting up libcrypt-dev:amd64 (1:4.4.26-1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up linux-libc-dev-ppc64el-cross (5.10.46-4cross4) ... Setting up libc6-dev:amd64 (2.32-4) ... Setting up libssh2-1:amd64 (1.10.0-2) ... Setting up cmake-data (3.22.0-1) ... Setting up libgcc-s1-ppc64el-cross (11.2.0-9cross1) ... Setting up binutils-powerpc64le-linux-gnu (2.37-10) ... Setting up libelf1:amd64 (0.186-1) ... Setting up libxml2:amd64 (2.9.12+dfsg-5+b1) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libprocps8:amd64 (2:3.3.17-5) ... Setting up gettext (0.21-4) ... Setting up libasan6-ppc64el-cross (11.2.0-9cross1) ... Setting up libc6-dev-ppc64el-cross (2.32-1cross4) ... Setting up libtool (2.4.6-15) ... Setting up libquadmath0-ppc64el-cross (11.2.0-9cross1) ... Setting up libarchive13:amd64 (3.4.3-2+b1) ... Setting up libldap-2.4-2:amd64 (2.4.59+dfsg-1) ... Setting up m4 (1.4.18-5) ... Setting up cpp-11-powerpc64le-linux-gnu (11.2.0-9cross1) ... Setting up libgomp1-ppc64el-cross (11.2.0-9cross1) ... Setting up liblsan0-ppc64el-cross (11.2.0-9cross1) ... Setting up perl (5.32.1-6) ... Setting up libtsan0-ppc64el-cross (11.2.0-9cross1) ... Setting up ucf (3.0043) ... Setting up libdpkg-perl (1.20.9) ... Setting up libstdc++6-ppc64el-cross (11.2.0-9cross1) ... Setting up autoconf (2.71-2) ... Setting up libitm1-ppc64el-cross (11.2.0-9cross1) ... Setting up libstdc++-11-dev:amd64 (11.2.0-12) ... Setting up dwz (0.14-1) ... Setting up groff-base (1.22.4-7) ... Setting up procps (2:3.3.17-5) ... Setting up libcurl4:amd64 (7.79.1-2) ... Setting up libsub-override-perl (0.09-2) ... Setting up cpp-powerpc64le-linux-gnu (4:11.2.0-2) ... Setting up automake (1:1.16.5-1.1) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-which-perl (1.23-1) ... Setting up g++-11 (11.2.0-12) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libubsan1-ppc64el-cross (11.2.0-9cross1) ... Setting up libdebhelper-perl (13.5.2) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libyaml-perl (1.30-1) ... Setting up dpkg-dev (1.20.9) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up dh-autoreconf (20) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up g++ (4:11.2.0-2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up libgcc-11-dev-ppc64el-cross (11.2.0-9cross1) ... Setting up cmake (3.22.0-1) ... Setting up build-essential (12.9) ... Setting up libfile-homedir-perl (1.006-1) ... Setting up libfile-stripnondeterminism-perl (1.12.1-1) ... Setting up gcc-11-powerpc64le-linux-gnu (11.2.0-9cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libstdc++-11-dev-ppc64el-cross (11.2.0-9cross1) ... Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-powerpc64le-linux-gnu (4:11.2.0-2) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-strip-nondeterminism (1.12.1-1) ... Setting up g++-11-powerpc64le-linux-gnu (11.2.0-9cross1) ... Setting up g++-powerpc64le-linux-gnu (4:11.2.0-2) ... Setting up debhelper (13.5.2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libconfig-auto-perl (0.44-1.1) ... Setting up libdebian-dpkgcross-perl (2.6.18+nmu2) ... Setting up dpkg-cross (2.6.18+nmu2) ... Setting up crossbuild-essential-ppc64el (12.9) ... Setting up libgcc-s1:ppc64el (11.2.0-12) ... Setting up libc6:ppc64el (2.32-4) ... Setting up libffi8:ppc64el (3.4.2-3) ... Setting up libtasn1-6:ppc64el (4.18.0-4) ... Setting up libdb5.3:ppc64el (5.3.28+dfsg1-0.8) ... Setting up libstdc++6:ppc64el (11.2.0-12) ... Setting up liblsan0:ppc64el (11.2.0-12) ... Setting up libitm1:ppc64el (11.2.0-12) ... Setting up libtsan0:ppc64el (11.2.0-12) ... Setting up libdisorder0:ppc64el (0.0.2+git20130809.8062ee1-4) ... Setting up libkeyutils1:ppc64el (1.6.1-2) ... Setting up libssl1.1:ppc64el (1.1.1l-1) ... Setting up libbrotli1:ppc64el (1.0.9-2+b3) ... Setting up libsmithwaterman0:ppc64el (0.0+git20160702.2610e25-12) ... Setting up libnghttp2-14:ppc64el (1.43.0-1) ... Setting up libunistring2:ppc64el (0.9.10-6) ... Setting up zlib1g:ppc64el (1:1.2.11.dfsg-2) ... Setting up libcrypt1:ppc64el (1:4.4.26-1) ... Setting up libidn2-0:ppc64el (2.3.2-2) ... Setting up libcom-err2:ppc64el (1.46.4-1) ... Setting up libgomp1:ppc64el (11.2.0-12) ... Setting up libaec0:ppc64el (1.0.6-1) ... Setting up libasan6:ppc64el (11.2.0-12) ... Setting up libkrb5support0:ppc64el (1.18.3-7) ... Setting up libsasl2-modules-db:ppc64el (2.1.27+dfsg2-2) ... Setting up libblas3:ppc64el (3.10.0-1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so.3 to provide /usr/lib/powerpc64le-linux-gnu/libblas.so.3 (libblas.so.3-powerpc64le-linux-gnu) in auto mode Setting up libjpeg62-turbo:ppc64el (1:2.1.2-1) ... Setting up libnettle8:ppc64el (3.7.3-1) ... Setting up libgmp10:ppc64el (2:6.2.1+dfsg-3) ... Setting up libquadmath0:ppc64el (11.2.0-12) ... Setting up libp11-kit0:ppc64el (0.24.0-5) ... Setting up libbamtools2.5.1:ppc64el (2.5.1+dfsg-10) ... Setting up libssl-dev:ppc64el (1.1.1l-1) ... Setting up libatomic1:ppc64el (11.2.0-12) ... Setting up libk5crypto3:ppc64el (1.18.3-7) ... Setting up libdisorder-dev:ppc64el (0.0.2+git20130809.8062ee1-4) ... Setting up libsasl2-2:ppc64el (2.1.27+dfsg2-2) ... Setting up libgfortran5:ppc64el (11.2.0-12) ... Setting up libjsoncpp24:ppc64el (1.9.4-5) ... Setting up libboost-math1.74.0:ppc64el (1.74.0-13) ... Setting up libubsan1:ppc64el (11.2.0-12) ... Setting up libgcc-11-dev:ppc64el (11.2.0-12) ... Setting up libcrypt-dev:ppc64el (1:4.4.26-1) ... Setting up libssh2-1:ppc64el (1.10.0-2) ... Setting up libkrb5-3:ppc64el (1.18.3-7) ... Setting up libblas-dev:ppc64el (3.10.0-1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/blas/libblas.so to provide /usr/lib/powerpc64le-linux-gnu/libblas.so (libblas.so-powerpc64le-linux-gnu) in auto mode Setting up libsz2:ppc64el (1.0.6-1) ... Setting up libjsoncpp-dev:ppc64el (1.9.4-5) ... Setting up liblapack3:ppc64el (3.10.0-1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so.3 (liblapack.so.3-powerpc64le-linux-gnu) in auto mode Setting up libpsl5:ppc64el (0.21.0-1.2) ... Setting up libhogweed6:ppc64el (3.7.3-1) ... Setting up libaec-dev:ppc64el (1.0.6-1) ... Setting up libarpack2:ppc64el (3.8.0-1) ... Setting up libsuperlu5:ppc64el (5.3.0+dfsg1-2) ... Setting up libgnutls30:ppc64el (3.7.2-2) ... Setting up librtmp1:ppc64el (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libbamtools-dev:ppc64el (2.5.1+dfsg-10) ... Setting up liblapack-dev:ppc64el (3.10.0-1) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/lapack/liblapack.so to provide /usr/lib/powerpc64le-linux-gnu/liblapack.so (liblapack.so-powerpc64le-linux-gnu) in auto mode Setting up libgssapi-krb5-2:ppc64el (1.18.3-7) ... Setting up libsmithwaterman-dev:ppc64el (0.0+git20160702.2610e25-12) ... Setting up libsuperlu-dev:ppc64el (5.3.0+dfsg1-2) ... Setting up libtirpc3:ppc64el (1.3.2-2) ... Setting up libarmadillo10:ppc64el (1:10.7.4+dfsg-1) ... Setting up libarpack2-dev:ppc64el (3.8.0-1) ... Setting up libldap-2.4-2:ppc64el (2.4.59+dfsg-1) ... Setting up libtirpc-dev:ppc64el (1.3.2-2) ... Setting up libnsl2:ppc64el (1.3.0-2) ... Setting up libcurl4:ppc64el (7.79.1-2) ... Setting up libcurl4-openssl-dev:ppc64el (7.79.1-2) ... Setting up libhdf5-103-1:ppc64el (1.10.7+repack-4) ... Setting up libnsl-dev:ppc64el (1.3.0-2) ... Setting up libhdf5-cpp-103-1:ppc64el (1.10.7+repack-4) ... Setting up libc6-dev:ppc64el (2.32-4) ... Setting up libhdf5-hl-100:ppc64el (1.10.7+repack-4) ... Setting up libhdf5-hl-cpp-100:ppc64el (1.10.7+repack-4) ... Setting up libjpeg62-turbo-dev:ppc64el (1:2.1.2-1) ... Setting up libhdf5-fortran-102:ppc64el (1.10.7+repack-4) ... Setting up libstdc++-11-dev:ppc64el (11.2.0-12) ... Setting up zlib1g-dev:ppc64el (1:1.2.11.dfsg-2) ... Setting up libhdf5-hl-fortran-100:ppc64el (1.10.7+repack-4) ... Setting up libboost1.74-dev:ppc64el (1.74.0-13) ... Setting up libjpeg-dev:ppc64el (1:2.1.2-1) ... Setting up libhdf5-dev:ppc64el (1.10.7+repack-4) ... update-alternatives: using /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/powerpc64le-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libboost-math1.74-dev:ppc64el (1.74.0-13) ... Setting up libboost-math-dev:ppc64el (1.74.0.3) ... Setting up libarmadillo-dev:ppc64el (1:10.7.4+dfsg-1) ... Setting up sbuild-build-depends-main-dummy:ppc64el (0.invalid.0) ... Processing triggers for libc-bin (2.32-4) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (ppc64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) amd64 (x86_64) Toolchain package versions: binutils_2.37-10 dpkg-dev_1.20.9 g++-11_11.2.0-12 gcc-11_11.2.0-12 libc6-dev_2.32-4 libstdc++-11-dev_11.2.0-12 libstdc++-11-dev-ppc64el-cross_11.2.0-9cross1 libstdc++6_11.2.0-12 libstdc++6-ppc64el-cross_11.2.0-9cross1 linux-libc-dev_5.15.5-1 Package versions: adduser_3.118 apt_2.3.13 autoconf_2.71-2 automake_1:1.16.5-1.1 autopoint_0.21-4 autotools-dev_20180224.1+nmu1 base-files_12 base-passwd_3.5.52 bash_5.1-3.1 binutils_2.37-10 binutils-common_2.37-10 binutils-powerpc64le-linux-gnu_2.37-10 binutils-x86-64-linux-gnu_2.37-10 bsdextrautils_2.37.2-4 bsdutils_1:2.37.2-4 build-essential_12.9 bzip2_1.0.8-4 cmake_3.22.0-1 cmake-data_3.22.0-1 coreutils_8.32-4.1 cpp_4:11.2.0-2 cpp-11_11.2.0-12 cpp-11-powerpc64le-linux-gnu_11.2.0-9cross1 cpp-8_8.4.0-7 cpp-powerpc64le-linux-gnu_4:11.2.0-2 cross-config_2.6.18+nmu2 crossbuild-essential-ppc64el_12.9 dash_0.5.11+git20210903+057cd650a4ed-3 debconf_1.5.79 debhelper_13.5.2 debian-archive-keyring_2021.1.1 debianutils_5.5-1 dh-autoreconf_20 dh-elpa-helper_2.0.9 dh-strip-nondeterminism_1.12.1-1 diffutils_1:3.7-5 dpkg_1.20.9 dpkg-cross_2.6.18+nmu2 dpkg-dev_1.20.9 dwz_0.14-1 e2fsprogs_1.46.4-1 emacsen-common_3.0.4 fakeroot_1.26-1 fdisk_2.37.2-4 file_1:5.41-2 findutils_4.8.0-1 g++_4:11.2.0-2 g++-11_11.2.0-12 g++-11-powerpc64le-linux-gnu_11.2.0-9cross1 g++-powerpc64le-linux-gnu_4:11.2.0-2 gcc_4:11.2.0-2 gcc-10-base_10.3.0-13 gcc-11_11.2.0-12 gcc-11-base_11.2.0-12 gcc-11-cross-base_11.2.0-9cross1 gcc-11-powerpc64le-linux-gnu_11.2.0-9cross1 gcc-11-powerpc64le-linux-gnu-base_11.2.0-9cross1 gcc-8-base_8.4.0-7 gcc-9-base_9.4.0-4 gcc-powerpc64le-linux-gnu_4:11.2.0-2 gettext_0.21-4 gettext-base_0.21-4 gpgv_2.2.27-2 grep_3.7-1 groff-base_1.22.4-7 gzip_1.10-4 hdf5-helpers_1.10.7+repack-4 hostname_3.23 init-system-helpers_1.60 intltool-debian_0.35.0+20060710.5 libacl1_2.3.1-1 libaec-dev_1.0.6-1 libaec0_1.0.6-1 libapt-pkg5.0_1.8.4 libapt-pkg6.0_2.3.13 libarchive-zip-perl_1.68-1 libarchive13_3.4.3-2+b1 libarmadillo-dev_1:10.7.4+dfsg-1 libarmadillo10_1:10.7.4+dfsg-1 libarpack2_3.8.0-1 libarpack2-dev_3.8.0-1 libasan5_9.4.0-4 libasan6_11.2.0-12 libasan6-ppc64el-cross_11.2.0-9cross1 libatomic1_11.2.0-12 libatomic1-ppc64el-cross_11.2.0-9cross1 libattr1_1:2.5.1-1 libaudit-common_1:3.0.6-1 libaudit1_1:3.0.6-1+b1 libbamtools-dev_2.5.1+dfsg-10 libbamtools2.5.1_2.5.1+dfsg-10 libbinutils_2.37-10 libblas-dev_3.10.0-1 libblas3_3.10.0-1 libblkid1_2.37.2-4 libboost-math-dev_1.74.0.3 libboost-math1.74-dev_1.74.0-13 libboost-math1.74.0_1.74.0-13 libboost1.74-dev_1.74.0-13 libbrotli1_1.0.9-2+b3 libbz2-1.0_1.0.8-4 libc-bin_2.32-4 libc-dev-bin_2.32-4 libc6_2.32-4 libc6-dev_2.32-4 libc6-dev-ppc64el-cross_2.32-1cross4 libc6-ppc64el-cross_2.32-1cross4 libcap-ng0_0.7.9-2.2+b1 libcap2_1:2.44-1 libcc1-0_11.2.0-12 libcom-err2_1.46.4-1 libconfig-auto-perl_0.44-1.1 libconfig-inifiles-perl_3.000003-1 libcrypt-dev_1:4.4.26-1 libcrypt1_1:4.4.26-1 libctf-nobfd0_2.37-10 libctf0_2.37-10 libcurl4_7.79.1-2 libcurl4-openssl-dev_7.79.1-2 libdb5.3_5.3.28+dfsg1-0.8 libdebconfclient0_0.261 libdebhelper-perl_13.5.2 libdebian-dpkgcross-perl_2.6.18+nmu2 libdisorder-dev_0.0.2+git20130809.8062ee1-4 libdisorder0_0.0.2+git20130809.8062ee1-4 libdpkg-perl_1.20.9 libelf1_0.186-1 libexpat1_2.4.1-3 libext2fs2_1.46.4-1 libfakeroot_1.26-1 libfdisk1_2.37.2-4 libffi6_3.2.1-9 libffi8_3.4.2-3 libfile-homedir-perl_1.006-1 libfile-stripnondeterminism-perl_1.12.1-1 libfile-which-perl_1.23-1 libgcc-11-dev_11.2.0-12 libgcc-11-dev-ppc64el-cross_11.2.0-9cross1 libgcc-s1_11.2.0-12 libgcc-s1-ppc64el-cross_11.2.0-9cross1 libgcrypt20_1.9.4-3+b1 libgdbm-compat4_1.22-1 libgdbm6_1.22-1 libgfortran5_11.2.0-12 libgmp10_2:6.2.1+dfsg-3 libgnutls30_3.7.2-2 libgomp1_11.2.0-12 libgomp1-ppc64el-cross_11.2.0-9cross1 libgpg-error0_1.42-3 libgssapi-krb5-2_1.18.3-7 libhdf5-103-1_1.10.7+repack-4 libhdf5-cpp-103-1_1.10.7+repack-4 libhdf5-dev_1.10.7+repack-4 libhdf5-fortran-102_1.10.7+repack-4 libhdf5-hl-100_1.10.7+repack-4 libhdf5-hl-cpp-100_1.10.7+repack-4 libhdf5-hl-fortran-100_1.10.7+repack-4 libhogweed4_3.5.1+really3.4.1-1 libhogweed6_3.7.3-1 libicu67_67.1-7 libidn2-0_2.3.2-2 libio-string-perl_1.08-3.1 libisl19_0.20-2 libisl23_0.24-2 libitm1_11.2.0-12 libitm1-ppc64el-cross_11.2.0-9cross1 libjpeg-dev_1:2.1.2-1 libjpeg62-turbo_1:2.1.2-1 libjpeg62-turbo-dev_1:2.1.2-1 libjsoncpp-dev_1.9.4-5 libjsoncpp24_1.9.4-5 libk5crypto3_1.18.3-7 libkeyutils1_1.6.1-2 libkrb5-3_1.18.3-7 libkrb5support0_1.18.3-7 liblapack-dev_3.10.0-1 liblapack3_3.10.0-1 libldap-2.4-2_2.4.59+dfsg-1 liblocale-gettext-perl_1.07-4+b1 liblsan0_11.2.0-12 liblsan0-ppc64el-cross_11.2.0-9cross1 liblz4-1_1.9.3-2 liblzma5_5.2.5-2 libmagic-mgc_1:5.41-2 libmagic1_1:5.41-2 libmount1_2.37.2-4 libmpc3_1.2.1-1 libmpfr6_4.1.0-3 libmpx2_8.4.0-7 libncurses6_6.3-1 libncursesw6_6.3-1 libnettle6_3.5.1+really3.4.1-1 libnettle8_3.7.3-1 libnghttp2-14_1.43.0-1 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libp11-kit0_0.24.0-5 libpam-modules_1.4.0-10 libpam-modules-bin_1.4.0-10 libpam-runtime_1.4.0-10 libpam0g_1.4.0-10 libpcre2-8-0_10.39-3 libpcre3_2:8.39-13 libperl5.28_5.28.1-6 libperl5.32_5.32.1-6 libpipeline1_1.5.4-1 libprocps8_2:3.3.17-5 libpsl5_0.21.0-1.2 libquadmath0_11.2.0-12 libquadmath0-ppc64el-cross_11.2.0-9cross1 libreadline8_8.1-2 librhash0_1.4.2-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b2 libsasl2-2_2.1.27+dfsg2-2 libsasl2-modules-db_2.1.27+dfsg2-2 libseccomp2_2.5.3-2 libselinux1_3.3-1+b1 libsemanage-common_3.3-1 libsemanage1_3.1-2 libsemanage2_3.3-1+b1 libsepol1_3.1-1 libsepol2_3.3-1 libsigsegv2_2.13-1 libsmartcols1_2.37.2-4 libsmithwaterman-dev_0.0+git20160702.2610e25-12 libsmithwaterman0_0.0+git20160702.2610e25-12 libss2_1.46.4-1 libssh2-1_1.10.0-2 libssl-dev_1.1.1l-1 libssl1.1_1.1.1l-1 libstdc++-11-dev_11.2.0-12 libstdc++-11-dev-ppc64el-cross_11.2.0-9cross1 libstdc++6_11.2.0-12 libstdc++6-ppc64el-cross_11.2.0-9cross1 libsub-override-perl_0.09-2 libsuperlu-dev_5.3.0+dfsg1-2 libsuperlu5_5.3.0+dfsg1-2 libsystemd0_249.7-1 libsz2_1.0.6-1 libtasn1-6_4.18.0-4 libtinfo6_6.3-1 libtirpc-common_1.3.2-2 libtirpc-dev_1.3.2-2 libtirpc3_1.3.2-2 libtool_2.4.6-15 libtsan0_11.2.0-12 libtsan0-ppc64el-cross_11.2.0-9cross1 libubsan1_11.2.0-12 libubsan1-ppc64el-cross_11.2.0-9cross1 libuchardet0_0.0.7-1 libudev1_249.7-1 libunistring2_0.9.10-6 libuuid1_2.37.2-4 libuv1_1.42.0-1 libxml-libxml-perl_2.0134+dfsg-2+b1 libxml-namespacesupport-perl_1.12-1.1 libxml-sax-base-perl_1.09-1.1 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-1 libxml2_2.9.12+dfsg-5+b1 libxxhash0_0.8.0-2 libyaml-perl_1.30-1 libzstd1_1.4.8+dfsg-3 linux-libc-dev_5.15.5-1 linux-libc-dev-ppc64el-cross_5.10.46-4cross4 login_1:4.8.1-2 logsave_1.46.4-1 lsb-base_11.1.0 m4_1.4.18-5 make_4.3-4.1 man-db_2.9.4-2 mawk_1.3.4.20200120-2 mount_2.37.2-4 ncurses-base_6.3-1 ncurses-bin_6.3-1 passwd_1:4.8.1-2 patch_2.7.6-7 perl_5.32.1-6 perl-base_5.32.1-6 perl-modules-5.28_5.28.1-6 perl-modules-5.32_5.32.1-6 po-debconf_1.0.21+nmu1 procps_2:3.3.17-5 readline-common_8.1-2 rpcsvc-proto_1.4.2-4 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sysvinit-utils_3.00-1 tar_1.34+dfsg-1 tzdata_2021e-1 ucf_3.0043 util-linux_2.37.2-4 xz-utils_5.2.5-2 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: tvc Binary: tvc Architecture: any Version: 5.0.3+git20151221.80e144e+dfsg-4 Maintainer: Debian Med Packaging Team Uploaders: Dominique Belhachemi , Andreas Tille Homepage: http://ioncommunity.thermofisher.com Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/tvc Vcs-Git: https://salsa.debian.org/med-team/tvc.git Build-Depends: debhelper-compat (= 12), cmake, libbamtools-dev, libjsoncpp-dev, libarmadillo-dev, libboost-math-dev, libsmithwaterman-dev Package-List: tvc deb science optional arch=any Checksums-Sha1: cd0223b1b1c96a2cc5a25fbc64e4e36a00347788 744668 tvc_5.0.3+git20151221.80e144e+dfsg.orig.tar.xz 6f76b58c0913d4ad218ced30c803dbd5137c6b94 9248 tvc_5.0.3+git20151221.80e144e+dfsg-4.debian.tar.xz Checksums-Sha256: 3339f118d2fe983bc028630d5bf5238b6e91b70a85e8046a742588a6c342740c 744668 tvc_5.0.3+git20151221.80e144e+dfsg.orig.tar.xz 77dcbe584a04b320253dfee8b34d1d1332b0b8cc6e3dd1041ff1abcf2ddd6493 9248 tvc_5.0.3+git20151221.80e144e+dfsg-4.debian.tar.xz Files: 68b468ca5054fb3260ad9de40131b632 744668 tvc_5.0.3+git20151221.80e144e+dfsg.orig.tar.xz 648aa3218c819a351c022e2cbc4d2e33 9248 tvc_5.0.3+git20151221.80e144e+dfsg-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEPpmlJvXcwMu/HO6mALrnSzQzafEFAmF+sZkSHG5pbGVzaEBk ZWJpYW4ub3JnAAoJEAC650s0M2nxWG0P/AjvHSoQJN6RD7ToUh2Wn2wHEHNNZtiS nWByLiJhYPhl/CmzdfiLKCNGBqoIHmif24utWj/OQ2V7bWaY6Pr2K976XRCGE1Z/ sZjnFi2+QzxRmR2ZfnLThu9OODY1h949SWGMW6UfMUvxu7msjrNfKgjz0iDEW+qU zE61CStyrkDib1OT+1dwMmLRT+rSyZI2mswI0fLOWEn5tXnfhaqsTDeWL+2UQCTY nWul1Ozpdq2WnPJUQfnt7rZPccfA3eWqM155c7RK2qweqoNHrhqfC8AtJas2sZpa GcPWSDaE0Xqui4IUPySfBmA+ZZZuoaypZAkHMB4urH3/KTxVtIVUxY5dOalRS+lO WFN56JsbXZnjMmZfM4vSxEpH93DpExGocO58RD2I9xvm/RCVkw0CwPQkolKiY3RD qjuv1qu96cO2so30Xqh+YEQSnQ2NhlmfnGnm/7ZSrt7GptYukua7BtXNwRMUMqyZ kjOdxHO3lxhESq2XiMJe8wbY/z+FmSTtrABFmDIfonB5XqiIc+LvVxdSl6C5dE1b 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applying hurd.patch dpkg-source: info: applying sse.patch dpkg-source: info: applying use_debian_packaged_smithwaterman.patch dpkg-source: info: applying python3.patch dpkg-source: info: applying gcc11.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.ppc64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=unstable-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1003 SCHROOT_GROUP=helmut SCHROOT_SESSION_ID=unstable-amd64-sbuild-7bdd4408-821f-4f99-bdb4-e2c26cad23b9 SCHROOT_UID=1003 SCHROOT_USER=helmut SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage -appc64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package tvc dpkg-buildpackage: info: source version 5.0.3+git20151221.80e144e+dfsg-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-architecture: warning: specified GNU system type powerpc64le-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture ppc64el debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a cd obj-powerpc64le-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_SYSTEM_NAME=Linux -DCMAKE_SYSTEM_PROCESSOR=ppc64le -DCMAKE_C_COMPILER=powerpc64le-linux-gnu-gcc -DCMAKE_CXX_COMPILER=powerpc64le-linux-gnu-g\+\+ -DPKG_CONFIG_EXECUTABLE=/usr/bin/powerpc64le-linux-gnu-pkg-config -DPKGCONFIG_EXECUTABLE=/usr/bin/powerpc64le-linux-gnu-pkg-config -DQMAKE_EXECUTABLE=/usr/bin/powerpc64le-linux-gnu-qmake -DCMAKE_INSTALL_LIBDIR=lib/powerpc64le-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:2 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 11.2.0 -- The CXX compiler identification is GNU 11.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/powerpc64le-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/powerpc64le-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- CMAKE_CXX_FLAGS: '-g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2' -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR PKGCONFIG_EXECUTABLE PKG_CONFIG_EXECUTABLE QMAKE_EXECUTABLE -- Build files have been written to: /<>/obj-powerpc64le-linux-gnu dh_auto_build -a cd obj-powerpc64le-linux-gnu && make -j1 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/<>/obj-powerpc64le-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-powerpc64le-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-powerpc64le-linux-gnu/CMakeFiles /<>/obj-powerpc64le-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make -f CMakeFiles/tvc.dir/build.make CMakeFiles/tvc.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/CMakeFiles/tvc.dir/DependInfo.cmake --color= make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f CMakeFiles/tvc.dir/build.make CMakeFiles/tvc.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' [ 1%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/VariantCaller.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/VariantCaller.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/VariantCaller.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/VariantCaller.cpp.o -c /<>/VariantCaller/VariantCaller.cpp /<>/VariantCaller/VariantCaller.cpp: In function ‘void TheSilenceOfTheArmadillos(std::ofstream&)’: /<>/VariantCaller/VariantCaller.cpp:36:9: warning: ‘void arma::set_stream_err1(std::ostream&)’ is deprecated [-Wdeprecated-declarations] 36 | arma::set_stream_err1(null_ostream); | ^~~~~~~~~~~~~~~ In file included from /usr/include/armadillo:357, from /<>/VariantCaller/VariantCaller.cpp:12: /usr/include/armadillo_bits/debug.hpp:92:1: note: declared here 92 | set_stream_err1(std::ostream& user_stream) | ^~~~~~~~~~~~~~~ /<>/VariantCaller/VariantCaller.cpp:36:24: warning: ‘void arma::set_stream_err1(std::ostream&)’ is deprecated [-Wdeprecated-declarations] 36 | arma::set_stream_err1(null_ostream); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/armadillo:357, from /<>/VariantCaller/VariantCaller.cpp:12: /usr/include/armadillo_bits/debug.hpp:92:1: note: declared here 92 | set_stream_err1(std::ostream& user_stream) | ^~~~~~~~~~~~~~~ /<>/VariantCaller/VariantCaller.cpp:37:9: warning: ‘void arma::set_stream_err2(std::ostream&)’ is deprecated [-Wdeprecated-declarations] 37 | arma::set_stream_err2(null_ostream); | ^~~~~~~~~~~~~~~ In file included from /usr/include/armadillo:357, from /<>/VariantCaller/VariantCaller.cpp:12: /usr/include/armadillo_bits/debug.hpp:103:1: note: declared here 103 | set_stream_err2(std::ostream& user_stream) | ^~~~~~~~~~~~~~~ /<>/VariantCaller/VariantCaller.cpp:37:24: warning: ‘void arma::set_stream_err2(std::ostream&)’ is deprecated [-Wdeprecated-declarations] 37 | arma::set_stream_err2(null_ostream); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ In file included from /usr/include/armadillo:357, from /<>/VariantCaller/VariantCaller.cpp:12: /usr/include/armadillo_bits/debug.hpp:103:1: note: declared here 103 | set_stream_err2(std::ostream& user_stream) | ^~~~~~~~~~~~~~~ [ 3%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/BAMWalkerEngine.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/BAMWalkerEngine.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/BAMWalkerEngine.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/BAMWalkerEngine.cpp.o -c /<>/VariantCaller/BAMWalkerEngine.cpp [ 4%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/OrderedBAMWriter.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/OrderedBAMWriter.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/OrderedBAMWriter.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/OrderedBAMWriter.cpp.o -c /<>/VariantCaller/OrderedBAMWriter.cpp [ 6%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/SampleManager.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/SampleManager.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/SampleManager.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/SampleManager.cpp.o -c /<>/VariantCaller/SampleManager.cpp [ 7%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/TargetsManager.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval 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/<>/VariantCaller/Bookkeeping/MiscUtil.cpp [ 15%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/ExtendParameters.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/ExtendParameters.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/ExtendParameters.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/ExtendParameters.cpp.o -c /<>/VariantCaller/Bookkeeping/ExtendParameters.cpp [ 17%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/InputStructures.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/InputStructures.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/InputStructures.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/InputStructures.cpp.o -c /<>/VariantCaller/Bookkeeping/InputStructures.cpp /<>/VariantCaller/Bookkeeping/InputStructures.cpp: In member function ‘void RecalibrationHandler::ReadRecalibrationFromComments(const BamTools::SamHeader&, const std::map, int>&)’: /<>/VariantCaller/Bookkeeping/InputStructures.cpp:240:18: warning: ‘Reader’ is deprecated: Use CharReader and CharReaderBuilder instead. [-Wdeprecated-declarations] 240 | Json::Reader recal_reader; | ^~~~~~~~~~~~ In file included from /usr/include/jsoncpp/json/json.h:11, from /<>/Calibration/CalibrationHelper.h:23, from /<>/Calibration/LinearCalibrationModel.h:16, from /<>/VariantCaller/Bookkeeping/InputStructures.h:19, from /<>/VariantCaller/Bookkeeping/InputStructures.cpp:7: /usr/include/jsoncpp/json/reader.h:37:63: note: declared here 37 | "Use CharReader and CharReaderBuilder instead.") JSON_API Reader { | ^~~~~~ /<>/VariantCaller/Bookkeeping/InputStructures.cpp:240:18: warning: ‘Json::Reader::Reader()’ is deprecated: Use CharReader and CharReaderBuilder instead [-Wdeprecated-declarations] 240 | Json::Reader recal_reader; | ^~~~~~~~~~~~ In file included from /usr/include/jsoncpp/json/json.h:11, from /<>/Calibration/CalibrationHelper.h:23, from /<>/Calibration/LinearCalibrationModel.h:16, from /<>/VariantCaller/Bookkeeping/InputStructures.h:19, from /<>/VariantCaller/Bookkeeping/InputStructures.cpp:7: /usr/include/jsoncpp/json/reader.h:56:3: note: declared here 56 | Reader(); | ^~~~~~ [ 18%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/Bookkeeping/VcfFormat.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads 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/<>/VariantCaller/Splice/SpliceVariantHypotheses.cpp [ 28%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/Filter/DecisionTreeData.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/Filter/DecisionTreeData.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/Filter/DecisionTreeData.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/Filter/DecisionTreeData.cpp.o -c /<>/VariantCaller/Filter/DecisionTreeData.cpp [ 29%] Building CXX object 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-I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/HypothesisEvaluator.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/HypothesisEvaluator.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/HypothesisEvaluator.cpp.o -c /<>/VariantCaller/HypothesisEvaluator.cpp [ 32%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/DiagnosticJSON.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools 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-Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/ShortStack.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/ShortStack.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/ShortStack.cpp.o -c /<>/VariantCaller/EnsembleEval/ShortStack.cpp [ 42%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/StackEngine.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/StackEngine.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/StackEngine.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/StackEngine.cpp.o -c /<>/VariantCaller/EnsembleEval/StackEngine.cpp [ 43%] Building CXX object CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/CrossHypotheses.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/CrossHypotheses.cpp.o -MF CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/CrossHypotheses.cpp.o.d -o CMakeFiles/tvc.dir/VariantCaller/EnsembleEval/CrossHypotheses.cpp.o -c /<>/VariantCaller/EnsembleEval/CrossHypotheses.cpp [ 45%] Building CXX object CMakeFiles/tvc.dir/external/vcflib/Variant.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/external/vcflib/Variant.cpp.o -MF CMakeFiles/tvc.dir/external/vcflib/Variant.cpp.o.d -o CMakeFiles/tvc.dir/external/vcflib/Variant.cpp.o -c /<>/external/vcflib/Variant.cpp [ 46%] Building CXX object CMakeFiles/tvc.dir/external/vcflib/split.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/external/vcflib/split.cpp.o -MF CMakeFiles/tvc.dir/external/vcflib/split.cpp.o.d -o CMakeFiles/tvc.dir/external/vcflib/split.cpp.o -c /<>/external/vcflib/split.cpp [ 48%] Building CXX object CMakeFiles/tvc.dir/external/vcflib/tabixpp/tabix.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/external/vcflib/tabixpp/tabix.cpp.o -MF CMakeFiles/tvc.dir/external/vcflib/tabixpp/tabix.cpp.o.d -o CMakeFiles/tvc.dir/external/vcflib/tabixpp/tabix.cpp.o -c /<>/external/vcflib/tabixpp/tabix.cpp [ 50%] Building C object CMakeFiles/tvc.dir/external/vcflib/tabixpp/index.c.o /usr/bin/powerpc64le-linux-gnu-gcc -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/external/vcflib/tabixpp/index.c.o -MF CMakeFiles/tvc.dir/external/vcflib/tabixpp/index.c.o.d -o CMakeFiles/tvc.dir/external/vcflib/tabixpp/index.c.o -c /<>/external/vcflib/tabixpp/index.c /<>/external/vcflib/tabixpp/index.c: In function ‘ti_index_core’: /<>/external/vcflib/tabixpp/index.c:336:42: warning: overflow in conversion from ‘uint32_t’ {aka ‘unsigned int’} to ‘int32_t’ {aka ‘int’} changes value from ‘last_bin = 4294967295’ to ‘-1’ [-Woverflow] 336 | save_bin = save_tid = last_tid = last_bin = 0xffffffffu; | ^~~~~~~~ [ 51%] Building C object CMakeFiles/tvc.dir/external/vcflib/tabixpp/bgzf.c.o /usr/bin/powerpc64le-linux-gnu-gcc -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/external/vcflib/tabixpp/bgzf.c.o -MF CMakeFiles/tvc.dir/external/vcflib/tabixpp/bgzf.c.o.d -o CMakeFiles/tvc.dir/external/vcflib/tabixpp/bgzf.c.o -c /<>/external/vcflib/tabixpp/bgzf.c /<>/external/vcflib/tabixpp/bgzf.c: In function ‘_bgzf_check_EOF’: /<>/external/vcflib/tabixpp/bgzf.c:678:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 678 | fread(buf, 1, 28, fp->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 53%] Building CXX object CMakeFiles/tvc.dir/external/freebayes/src/AlleleParser.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/external/freebayes/src/AlleleParser.cpp.o -MF CMakeFiles/tvc.dir/external/freebayes/src/AlleleParser.cpp.o.d -o CMakeFiles/tvc.dir/external/freebayes/src/AlleleParser.cpp.o -c /<>/external/freebayes/src/AlleleParser.cpp [ 54%] Building CXX object CMakeFiles/tvc.dir/BaseCaller/PIDloop.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/BaseCaller/PIDloop.cpp.o -MF CMakeFiles/tvc.dir/BaseCaller/PIDloop.cpp.o.d -o CMakeFiles/tvc.dir/BaseCaller/PIDloop.cpp.o -c /<>/BaseCaller/PIDloop.cpp [ 56%] Building CXX object CMakeFiles/tvc.dir/BaseCaller/DPTreephaser.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/BaseCaller/DPTreephaser.cpp.o -MF CMakeFiles/tvc.dir/BaseCaller/DPTreephaser.cpp.o.d -o CMakeFiles/tvc.dir/BaseCaller/DPTreephaser.cpp.o -c /<>/BaseCaller/DPTreephaser.cpp [ 57%] Building CXX object CMakeFiles/tvc.dir/Calibration/LinearCalibrationModel.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/Calibration/LinearCalibrationModel.cpp.o -MF CMakeFiles/tvc.dir/Calibration/LinearCalibrationModel.cpp.o.d -o CMakeFiles/tvc.dir/Calibration/LinearCalibrationModel.cpp.o -c /<>/Calibration/LinearCalibrationModel.cpp /<>/Calibration/LinearCalibrationModel.cpp: In member function ‘void LinearCalibrationModel::SaveModelFileToBamComments(std::vector >&, const string&) const’: /<>/Calibration/LinearCalibrationModel.cpp:708:20: warning: ‘FastWriter’ is deprecated: Use StreamWriterBuilder instead [-Wdeprecated-declarations] 708 | Json::FastWriter writer; | ^~~~~~ In file included from /usr/include/jsoncpp/json/json.h:13, from /<>/Calibration/CalibrationHelper.h:23, from /<>/Calibration/LinearCalibrationModel.h:16, from /<>/Calibration/LinearCalibrationModel.cpp:13: /usr/include/jsoncpp/json/writer.h:168:70: note: declared here 168 | class JSONCPP_DEPRECATED("Use StreamWriterBuilder instead") JSON_API FastWriter | ^~~~~~~~~~ [ 59%] Building CXX object CMakeFiles/tvc.dir/Calibration/FlowAlignment.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvc.dir/Calibration/FlowAlignment.cpp.o -MF 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-I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvcutils.dir/external/vcflib/tabixpp/bgzf.c.o -MF CMakeFiles/tvcutils.dir/external/vcflib/tabixpp/bgzf.c.o.d -o CMakeFiles/tvcutils.dir/external/vcflib/tabixpp/bgzf.c.o -c /<>/external/vcflib/tabixpp/bgzf.c /<>/external/vcflib/tabixpp/bgzf.c: In function ‘_bgzf_check_EOF’: /<>/external/vcflib/tabixpp/bgzf.c:678:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 678 | fread(buf, 1, 28, fp->file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 98%] Building CXX object CMakeFiles/tvcutils.dir/IonVersion.cpp.o /usr/bin/powerpc64le-linux-gnu-g++ -DALIGNSTATS_IGNORE -I/<>/external/vcflib -I/<>/external/freebayes/src -I/usr/include/jsoncpp -I/usr/include/bamtools -I/<>/VariantCaller -I/<>/VariantCaller/FlowDistEval -I/<>/VariantCaller/EnsembleEval -I/<>/VariantCaller/Bookkeeping -I/<>/VariantCaller/Reads -I/<>/VariantCaller/Splice -I/<>/VariantCaller/Filter -I/<>/realignment -I/<>/file-io -I/<>/BaseCaller -I/<>/Calibration -I/<>/Util -I/<> -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/tvcutils.dir/IonVersion.cpp.o -MF CMakeFiles/tvcutils.dir/IonVersion.cpp.o.d -o CMakeFiles/tvcutils.dir/IonVersion.cpp.o -c /<>/obj-powerpc64le-linux-gnu/IonVersion.cpp [100%] Linking CXX executable tvcutils /usr/bin/cmake -E cmake_link_script CMakeFiles/tvcutils.dir/link.txt --verbose=1 /usr/bin/powerpc64le-linux-gnu-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -rdynamic CMakeFiles/tvcutils.dir/VariantCaller/tvcutils/tvcutils.cpp.o CMakeFiles/tvcutils.dir/VariantCaller/tvcutils/prepare_hotspots.cpp.o CMakeFiles/tvcutils.dir/VariantCaller/tvcutils/validate_bed.cpp.o CMakeFiles/tvcutils.dir/VariantCaller/tvcutils/unify_vcf.cpp.o CMakeFiles/tvcutils.dir/VariantCaller/TargetsManager.cpp.o CMakeFiles/tvcutils.dir/Util/OptArgs.cpp.o CMakeFiles/tvcutils.dir/external/vcflib/Variant.cpp.o CMakeFiles/tvcutils.dir/external/vcflib/split.cpp.o CMakeFiles/tvcutils.dir/external/vcflib/tabixpp/tabix.cpp.o CMakeFiles/tvcutils.dir/external/vcflib/tabixpp/index.c.o CMakeFiles/tvcutils.dir/external/vcflib/tabixpp/bgzf.c.o CMakeFiles/tvcutils.dir/IonVersion.cpp.o -o tvcutils -lbamtools -lz -ljsoncpp -lsmithwaterman -ldisorder make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [100%] Built target tvcutils make[2]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-powerpc64le-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' dh_auto_test -a create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/tvc/ -a cd obj-powerpc64le-linux-gnu && make -j1 install DESTDIR=/<>/tvc-5.0.3\+git20151221.80e144e\+dfsg/debian/tvc AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/obj-powerpc64le-linux-gnu' /usr/bin/cmake -S/<> -B/<>/obj-powerpc64le-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/obj-powerpc64le-linux-gnu/CMakeFiles /<>/obj-powerpc64le-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make -f CMakeFiles/tvc.dir/build.make CMakeFiles/tvc.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/CMakeFiles/tvc.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target tvc make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f CMakeFiles/tvc.dir/build.make CMakeFiles/tvc.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/tvc.dir/build'. make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [ 68%] Built target tvc make -f CMakeFiles/tvcassembly.dir/build.make CMakeFiles/tvcassembly.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/CMakeFiles/tvcassembly.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target tvcassembly make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f CMakeFiles/tvcassembly.dir/build.make CMakeFiles/tvcassembly.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/tvcassembly.dir/build'. make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [ 79%] Built target tvcassembly make -f CMakeFiles/tvcutils.dir/build.make CMakeFiles/tvcutils.dir/depend make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' cd /<>/obj-powerpc64le-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<> /<> /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu /<>/obj-powerpc64le-linux-gnu/CMakeFiles/tvcutils.dir/DependInfo.cmake --color= Consolidate compiler generated dependencies of target tvcutils make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' make -f CMakeFiles/tvcutils.dir/build.make CMakeFiles/tvcutils.dir/build make[3]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/tvcutils.dir/build'. make[3]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' [100%] Built target tvcutils make[2]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/obj-powerpc64le-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/<>/obj-powerpc64le-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/debian/tvc/usr/bin/tvc -- Installing: /<>/debian/tvc/usr/bin/tvcassembly -- Installing: /<>/debian/tvc/usr/bin/tvcutils -- Installing: /<>/debian/tvc/usr/bin/variant_caller_pipeline.py -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets/targetseq_germline_lowstringency_p1_parameters.json -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets/pgx4_germline_lowstringency_pgm_parameters.json -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets/ocp_somatic_lowstringency_pgm_parameters.json -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets/ampliseqexome_somatic_lowstringency_p1_parameters.json -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets/ampliseqexome_germline_lowstringency_p1_parameters.json -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets/ampliseq_somatic_lowstringency_pgm_parameters.json -- Installing: /<>/debian/tvc/usr/share/TVC/pluginMedia/parameter_sets/ampliseq_germline_lowstringency_pgm_parameters.json -- Installing: /<>/debian/tvc/usr/share/TVC/sse -- Installing: /<>/debian/tvc/usr/share/TVC/sse/motifset.txt -- Installing: /<>/debian/tvc/usr/share/TVC/sse/ampliseqexome_germline_p1_hiq_motifset.txt -- Installing: /<>/debian/tvc/usr/share/TVC/examples -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1 -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/test_unmerged_detail.bed -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/test_original.bed -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/test_merged_plain.bed -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/test.bed -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/test.bam.bai -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/test.bam -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/reference.fasta.fai -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/reference.fasta -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/reference.dict -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/expected -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/expected/small_variants.vcf -- Installing: /<>/debian/tvc/usr/share/TVC/examples/example1/expected/TSVC_variants.vcf make[1]: Leaving directory '/<>/obj-powerpc64le-linux-gnu' dh_installdocs -a dh_installchangelogs -a dh_lintian -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/tvc/usr/bin/tvcutils debian/tvc/usr/bin/tvc were not linked against libdisorder.so.0 (they use none of the library's symbols) dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'tvc' in '../tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb'. dpkg-deb: building package 'tvc-dbgsym' in '../tvc-dbgsym_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb'. dpkg-genbuildinfo --build=any dpkg-genchanges --build=any >../tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2021-11-27T13:30:45Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.changes: ----------------------------------------------------- Format: 1.8 Date: Sun, 31 Oct 2021 20:30:30 +0530 Source: tvc Binary: tvc tvc-dbgsym Built-For-Profiles: cross nocheck Architecture: ppc64el Version: 5.0.3+git20151221.80e144e+dfsg-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: tvc - genetic variant caller for Ion Torrent sequencing platforms Closes: 984370 Changes: tvc (5.0.3+git20151221.80e144e+dfsg-4) unstable; urgency=medium . * Team upload. * Add patch to fix FTBFS with gcc-11 (Closes: #984370) Checksums-Sha1: 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tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: tvc Binary: tvc tvc-dbgsym Architecture: ppc64el Version: 5.0.3+git20151221.80e144e+dfsg-4 Checksums-Md5: 5ba33b96a66c38214371ae3eafb73035 10966668 tvc-dbgsym_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb c1d9a694ccf407a1ba03a62f5a05d950 1076416 tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb Checksums-Sha1: 8a1647bbd2baf95852e7fde0802a327a6a52e519 10966668 tvc-dbgsym_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb 6a03b1ac6105f7e9e40a5d78b8b7904ccdb369e0 1076416 tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb Checksums-Sha256: 261aeaa6a1f44b21d57570dc3b163860d75bc48ef99aa0c93248b835f24da2a7 10966668 tvc-dbgsym_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb c97ae1dbd92d36eb1459b18eb4c4fc16ccdd14e7587aa1c2ce7654f2379be456 1076416 tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Sat, 27 Nov 2021 13:30:45 +0000 Build-Path: /<> Installed-Build-Depends: autoconf (= 2.71-2), automake (= 1:1.16.5-1.1), autopoint (= 0.21-4), autotools-dev (= 20180224.1+nmu1), base-files (= 12), base-passwd (= 3.5.52), bash (= 5.1-3.1), binutils (= 2.37-10), binutils-common (= 2.37-10), binutils-x86-64-linux-gnu (= 2.37-10), bsdextrautils (= 2.37.2-4), bsdutils (= 1:2.37.2-4), build-essential (= 12.9), bzip2 (= 1.0.8-4), cmake (= 3.22.0-1), cmake-data (= 3.22.0-1), coreutils (= 8.32-4.1), cpp (= 4:11.2.0-2), cpp-11 (= 11.2.0-12), dash (= 0.5.11+git20210903+057cd650a4ed-3), debconf (= 1.5.79), debhelper (= 13.5.2), debianutils (= 5.5-1), dh-autoreconf (= 20), dh-elpa-helper (= 2.0.9), dh-strip-nondeterminism (= 1.12.1-1), diffutils (= 1:3.7-5), dpkg (= 1.20.9), dpkg-dev (= 1.20.9), dwz (= 0.14-1), emacsen-common (= 3.0.4), file (= 1:5.41-2), findutils (= 4.8.0-1), g++ (= 4:11.2.0-2), g++-11 (= 11.2.0-12), gcc (= 4:11.2.0-2), gcc-11 (= 11.2.0-12), gcc-11-base (= 11.2.0-12), gettext (= 0.21-4), gettext-base (= 0.21-4), grep (= 3.7-1), groff-base (= 1.22.4-7), gzip (= 1.10-4), hdf5-helpers (= 1.10.7+repack-4), hostname (= 3.23), init-system-helpers (= 1.60), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.3.1-1), libaec-dev (= 1.0.6-1), libaec0 (= 1.0.6-1), libarchive-zip-perl (= 1.68-1), libarchive13 (= 3.4.3-2+b1), libarmadillo-dev (= 1:10.7.4+dfsg-1), libarmadillo10 (= 1:10.7.4+dfsg-1), libarpack2 (= 3.8.0-1), libarpack2-dev (= 3.8.0-1), libasan6 (= 11.2.0-12), libatomic1 (= 11.2.0-12), libattr1 (= 1:2.5.1-1), libaudit-common (= 1:3.0.6-1), libaudit1 (= 1:3.0.6-1+b1), libbamtools-dev (= 2.5.1+dfsg-10), libbamtools2.5.1 (= 2.5.1+dfsg-10), libbinutils (= 2.37-10), libblas-dev (= 3.10.0-1), libblas3 (= 3.10.0-1), libblkid1 (= 2.37.2-4), libboost-math-dev (= 1.74.0.3), libboost-math1.74-dev (= 1.74.0-13), libboost-math1.74.0 (= 1.74.0-13), libboost1.74-dev (= 1.74.0-13), libbrotli1 (= 1.0.9-2+b3), libbz2-1.0 (= 1.0.8-4), libc-bin (= 2.32-4), libc-dev-bin (= 2.32-4), libc6 (= 2.32-4), libc6-dev (= 2.32-4), libcap-ng0 (= 0.7.9-2.2+b1), libcap2 (= 1:2.44-1), libcc1-0 (= 11.2.0-12), libcom-err2 (= 1.46.4-1), libcrypt-dev (= 1:4.4.26-1), libcrypt1 (= 1:4.4.26-1), libctf-nobfd0 (= 2.37-10), libctf0 (= 2.37-10), libcurl4 (= 7.79.1-2), libcurl4-openssl-dev (= 7.79.1-2), libdb5.3 (= 5.3.28+dfsg1-0.8), libdebconfclient0 (= 0.261), libdebhelper-perl (= 13.5.2), libdisorder-dev (= 0.0.2+git20130809.8062ee1-4), libdisorder0 (= 0.0.2+git20130809.8062ee1-4), libdpkg-perl (= 1.20.9), libelf1 (= 0.186-1), libexpat1 (= 2.4.1-3), libffi8 (= 3.4.2-3), libfile-stripnondeterminism-perl (= 1.12.1-1), libgcc-11-dev (= 11.2.0-12), libgcc-s1 (= 11.2.0-12), libgcrypt20 (= 1.9.4-3+b1), libgdbm-compat4 (= 1.22-1), libgdbm6 (= 1.22-1), libgfortran5 (= 11.2.0-12), libgmp10 (= 2:6.2.1+dfsg-3), libgnutls30 (= 3.7.2-2), libgomp1 (= 11.2.0-12), libgpg-error0 (= 1.42-3), libgssapi-krb5-2 (= 1.18.3-7), libhdf5-103-1 (= 1.10.7+repack-4), libhdf5-cpp-103-1 (= 1.10.7+repack-4), libhdf5-dev (= 1.10.7+repack-4), libhdf5-fortran-102 (= 1.10.7+repack-4), libhdf5-hl-100 (= 1.10.7+repack-4), libhdf5-hl-cpp-100 (= 1.10.7+repack-4), libhdf5-hl-fortran-100 (= 1.10.7+repack-4), libhogweed6 (= 3.7.3-1), libicu67 (= 67.1-7), libidn2-0 (= 2.3.2-2), libisl23 (= 0.24-2), libitm1 (= 11.2.0-12), libjpeg-dev (= 1:2.1.2-1), libjpeg62-turbo (= 1:2.1.2-1), libjpeg62-turbo-dev (= 1:2.1.2-1), libjsoncpp-dev (= 1.9.4-5), libjsoncpp24 (= 1.9.4-5), libk5crypto3 (= 1.18.3-7), libkeyutils1 (= 1.6.1-2), libkrb5-3 (= 1.18.3-7), libkrb5support0 (= 1.18.3-7), liblapack-dev (= 3.10.0-1), liblapack3 (= 3.10.0-1), libldap-2.4-2 (= 2.4.59+dfsg-1), liblsan0 (= 11.2.0-12), liblz4-1 (= 1.9.3-2), liblzma5 (= 5.2.5-2), libmagic-mgc (= 1:5.41-2), libmagic1 (= 1:5.41-2), libmount1 (= 2.37.2-4), libmpc3 (= 1.2.1-1), libmpfr6 (= 4.1.0-3), libncurses6 (= 6.3-1), libncursesw6 (= 6.3-1), libnettle8 (= 3.7.3-1), libnghttp2-14 (= 1.43.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libp11-kit0 (= 0.24.0-5), libpam-modules (= 1.4.0-10), libpam-modules-bin (= 1.4.0-10), libpam-runtime (= 1.4.0-10), libpam0g (= 1.4.0-10), libpcre2-8-0 (= 10.39-3), libpcre3 (= 2:8.39-13), libperl5.32 (= 5.32.1-6), libpipeline1 (= 1.5.4-1), libprocps8 (= 2:3.3.17-5), libpsl5 (= 0.21.0-1.2), libquadmath0 (= 11.2.0-12), librhash0 (= 1.4.2-1), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b2), libsasl2-2 (= 2.1.27+dfsg2-2), libsasl2-modules-db (= 2.1.27+dfsg2-2), libseccomp2 (= 2.5.3-2), libselinux1 (= 3.3-1+b1), libsigsegv2 (= 2.13-1), libsmartcols1 (= 2.37.2-4), libsmithwaterman-dev (= 0.0+git20160702.2610e25-12), libsmithwaterman0 (= 0.0+git20160702.2610e25-12), libssh2-1 (= 1.10.0-2), libssl-dev (= 1.1.1l-1), libssl1.1 (= 1.1.1l-1), libstdc++-11-dev (= 11.2.0-12), libstdc++6 (= 11.2.0-12), libsub-override-perl (= 0.09-2), libsuperlu-dev (= 5.3.0+dfsg1-2), libsuperlu5 (= 5.3.0+dfsg1-2), libsystemd0 (= 249.7-1), libsz2 (= 1.0.6-1), libtasn1-6 (= 4.18.0-4), libtinfo6 (= 6.3-1), libtirpc-common (= 1.3.2-2), libtirpc-dev (= 1.3.2-2), libtirpc3 (= 1.3.2-2), libtool (= 2.4.6-15), libtsan0 (= 11.2.0-12), libubsan1 (= 11.2.0-12), libuchardet0 (= 0.0.7-1), libudev1 (= 249.7-1), libunistring2 (= 0.9.10-6), libuuid1 (= 2.37.2-4), libuv1 (= 1.42.0-1), libxml2 (= 2.9.12+dfsg-5+b1), libzstd1 (= 1.4.8+dfsg-3), linux-libc-dev (= 5.15.5-1), login (= 1:4.8.1-2), lsb-base (= 11.1.0), m4 (= 1.4.18-5), make (= 4.3-4.1), man-db (= 2.9.4-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.3-1), ncurses-bin (= 6.3-1), patch (= 2.7.6-7), perl (= 5.32.1-6), perl-base (= 5.32.1-6), perl-modules-5.32 (= 5.32.1-6), po-debconf (= 1.0.21+nmu1), procps (= 2:3.3.17-5), rpcsvc-proto (= 1.4.2-4), sed (= 4.8-1), sensible-utils (= 0.0.17), sysvinit-utils (= 3.00-1), tar (= 1.34+dfsg-1), util-linux (= 2.37.2-4), xz-utils (= 5.2.5-2), zlib1g (= 1:1.2.11.dfsg-2), zlib1g-dev (= 1:1.2.11.dfsg-2) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1635692430" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ tvc-dbgsym_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb ------------------------------------------------------- new Debian package, version 2.0. size 10966668 bytes: control archive=708 bytes. 490 bytes, 12 lines control 403 bytes, 4 lines md5sums Package: tvc-dbgsym Source: tvc Version: 5.0.3+git20151221.80e144e+dfsg-4 Auto-Built-Package: debug-symbols Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 11046 Depends: tvc (= 5.0.3+git20151221.80e144e+dfsg-4) Section: debug Priority: optional Description: debug symbols for tvc Build-Ids: 0593fabd7c2d9d08cdbd4be0fd603bb377ab034e 5874234b35fe619c0a9f08785d0c95f4cb8b469e b2325c22e60474f74c5a3514c235e0af3211fbd5 drwxr-xr-x root/root 0 2021-10-31 15:00 ./ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/debug/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/debug/.build-id/05/ -rw-r--r-- root/root 808048 2021-10-31 15:00 ./usr/lib/debug/.build-id/05/93fabd7c2d9d08cdbd4be0fd603bb377ab034e.debug drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/debug/.build-id/58/ -rw-r--r-- root/root 7683304 2021-10-31 15:00 ./usr/lib/debug/.build-id/58/74234b35fe619c0a9f08785d0c95f4cb8b469e.debug drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/debug/.build-id/b2/ -rw-r--r-- root/root 2330240 2021-10-31 15:00 ./usr/lib/debug/.build-id/b2/325c22e60474f74c5a3514c235e0af3211fbd5.debug drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/ -rw-r--r-- root/root 472080 2021-10-31 15:00 ./usr/lib/debug/.dwz/powerpc64le-linux-gnu/tvc.debug drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/doc/ lrwxrwxrwx root/root 0 2021-10-31 15:00 ./usr/share/doc/tvc-dbgsym -> tvc tvc_5.0.3+git20151221.80e144e+dfsg-4_ppc64el.deb ------------------------------------------------ new Debian package, version 2.0. size 1076416 bytes: control archive=1684 bytes. 998 bytes, 16 lines control 2459 bytes, 28 lines md5sums Package: tvc Version: 5.0.3+git20151221.80e144e+dfsg-4 Architecture: ppc64el Maintainer: Debian Med Packaging Team Installed-Size: 3669 Depends: libarmadillo10 (>= 1:10.7.4+dfsg), libbamtools2.5.1 (>= 2.5.1+dfsg), libc6 (>= 2.29), libdisorder0 (>= 0.0.2), libgcc-s1 (>= 3.4.4), libjsoncpp24 (>= 1.9.4), libsmithwaterman0 (>= 0.0+git20160702.2610e25), libstdc++6 (>= 11), zlib1g (>= 1:1.1.4), python3 Section: science Priority: optional Homepage: http://ioncommunity.thermofisher.com Description: genetic variant caller for Ion Torrent sequencing platforms Torrent Variant Caller (TVC) is a genetic variant caller for Ion Torrent sequencing platforms, and is specially optimized to exploit the underlying flow signal information in the statistical model to evaluate variants. Torrent Variant Caller is designed to call single-nucleotide polymorphisms (SNPs), multi-nucleotide polymorphisms (MNPs), insertions, deletions, and block substitutions. drwxr-xr-x root/root 0 2021-10-31 15:00 ./ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/bin/ -rwxr-xr-x root/root 1316728 2021-10-31 15:00 ./usr/bin/tvc -rwxr-xr-x root/root 265936 2021-10-31 15:00 ./usr/bin/tvcassembly -rwxr-xr-x root/root 725128 2021-10-31 15:00 ./usr/bin/tvcutils -rwxr-xr-x root/root 12985 2021-10-31 15:00 ./usr/bin/variant_caller_pipeline.py drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/TVC/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/TVC/examples/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/TVC/examples/example1/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/TVC/examples/example1/expected/ -rw-r--r-- root/root 6876 2015-12-21 20:38 ./usr/share/TVC/examples/example1/expected/TSVC_variants.vcf -rw-r--r-- root/root 6479 2015-12-21 20:38 ./usr/share/TVC/examples/example1/expected/small_variants.vcf -rw-r--r-- root/root 108 2015-12-21 20:38 ./usr/share/TVC/examples/example1/reference.dict -rw-r--r-- root/root 3400 2015-12-21 20:38 ./usr/share/TVC/examples/example1/reference.fasta -rw-r--r-- root/root 22 2015-12-21 20:38 ./usr/share/TVC/examples/example1/reference.fasta.fai -rw-r--r-- root/root 225904 2015-12-21 20:38 ./usr/share/TVC/examples/example1/test.bam -rw-r--r-- root/root 96 2015-12-21 20:38 ./usr/share/TVC/examples/example1/test.bam.bai -rw-r--r-- root/root 13 2015-12-21 20:38 ./usr/share/TVC/examples/example1/test.bed -rw-r--r-- root/root 13 2015-12-21 20:38 ./usr/share/TVC/examples/example1/test_merged_plain.bed -rw-r--r-- root/root 13 2015-12-21 20:38 ./usr/share/TVC/examples/example1/test_original.bed -rw-r--r-- root/root 70 2015-12-21 20:38 ./usr/share/TVC/examples/example1/test_unmerged_detail.bed drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/TVC/pluginMedia/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/TVC/pluginMedia/parameter_sets/ -rw-r--r-- root/root 2809 2015-12-21 20:38 ./usr/share/TVC/pluginMedia/parameter_sets/ampliseq_germline_lowstringency_pgm_parameters.json -rw-r--r-- root/root 2926 2015-12-21 20:38 ./usr/share/TVC/pluginMedia/parameter_sets/ampliseq_somatic_lowstringency_pgm_parameters.json -rw-r--r-- root/root 2826 2015-12-21 20:38 ./usr/share/TVC/pluginMedia/parameter_sets/ampliseqexome_germline_lowstringency_p1_parameters.json -rw-r--r-- root/root 2918 2015-12-21 20:38 ./usr/share/TVC/pluginMedia/parameter_sets/ampliseqexome_somatic_lowstringency_p1_parameters.json -rw-r--r-- root/root 3062 2015-12-21 20:38 ./usr/share/TVC/pluginMedia/parameter_sets/ocp_somatic_lowstringency_pgm_parameters.json -rw-r--r-- root/root 2628 2015-12-21 20:38 ./usr/share/TVC/pluginMedia/parameter_sets/pgx4_germline_lowstringency_pgm_parameters.json -rw-r--r-- root/root 2757 2015-12-21 20:38 ./usr/share/TVC/pluginMedia/parameter_sets/targetseq_germline_lowstringency_p1_parameters.json drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/TVC/sse/ -rw-r--r-- root/root 683778 2015-12-21 20:38 ./usr/share/TVC/sse/ampliseqexome_germline_p1_hiq_motifset.txt -rw-r--r-- root/root 451754 2015-12-21 20:38 ./usr/share/TVC/sse/motifset.txt drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/doc/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/doc/tvc/ -rw-r--r-- root/root 1078 2021-10-31 14:47 ./usr/share/doc/tvc/README.Debian -rw-r--r-- root/root 1240 2021-10-31 15:00 ./usr/share/doc/tvc/changelog.Debian.gz -rw-r--r-- root/root 2939 2021-10-31 14:47 ./usr/share/doc/tvc/copyright drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/lintian/ drwxr-xr-x root/root 0 2021-10-31 15:00 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 135 2021-10-31 14:47 ./usr/share/lintian/overrides/tvc lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [577 B] Get:5 copy:/<>/apt_archive ./ Packages [665 B] Fetched 2205 B in 0s (87.3 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils t1utils unzip Suggested packages: libxml-parser-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libdevel-lexalias-perl libbusiness-isbn-perl libwww-perl binutils-multiarch libtext-template-perl zip Recommended packages: gnupg liblist-someutils-xs-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libref-util-perl libtype-tiny-xs-perl The following NEW packages will be installed: diffstat gpg gpgconf libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libcapture-tiny-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libexception-class-perl libexporter-tiny-perl libfile-basedir-perl libfile-find-rule-perl libfont-ttf-perl libhtml-html5-entities-perl libimport-into-perl libio-interactive-perl libio-prompt-tiny-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-moreutils-perl liblist-moreutils-xs-perl liblist-someutils-perl liblist-utilsby-perl liblzo2-2 libmarkdown2 libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-ipv6addr-perl libnet-netmask-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libtype-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzip lzop patchutils sbuild-build-depends-lintian-dummy:ppc64el t1utils unzip 0 upgraded, 102 newly installed, 0 to remove and 0 not upgraded. Need to get 7885 kB of archives. After this operation, 22.9 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://debian.oregonstate.edu/debian unstable/main amd64 diffstat amd64 1.64-1 [36.6 kB] Get:3 http://debian.oregonstate.edu/debian unstable/main amd64 libassuan0 amd64 2.5.5-1 [51.8 kB] Get:4 http://debian.oregonstate.edu/debian unstable/main amd64 gpgconf amd64 2.2.27-2 [547 kB] Get:5 http://debian.oregonstate.edu/debian unstable/main amd64 libsqlite3-0 amd64 3.36.0-2 [815 kB] Get:6 http://debian.oregonstate.edu/debian unstable/main amd64 gpg amd64 2.2.27-2 [927 kB] Get:7 http://debian.oregonstate.edu/debian unstable/main amd64 libaliased-perl all 0.34-1.1 [14.1 kB] Get:8 http://debian.oregonstate.edu/debian unstable/main amd64 libapt-pkg-perl amd64 0.1.40 [72.2 kB] Get:9 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get:10 http://debian.oregonstate.edu/debian unstable/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get:11 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get:12 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get:13 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get:14 http://debian.oregonstate.edu/debian unstable/main amd64 libtry-tiny-perl all 0.31-1 [24.2 kB] Get:15 http://debian.oregonstate.edu/debian unstable/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get:16 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get:17 http://debian.oregonstate.edu/debian unstable/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get:18 http://debian.oregonstate.edu/debian unstable/main amd64 libb-hooks-endofscope-perl all 0.25-1 [19.5 kB] Get:19 http://debian.oregonstate.edu/debian unstable/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get:20 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:21 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get:22 http://debian.oregonstate.edu/debian unstable/main amd64 libclass-xsaccessor-perl amd64 1.19-3+b7 [38.1 kB] Get:23 http://debian.oregonstate.edu/debian unstable/main amd64 libclone-perl amd64 0.45-1+b1 [15.4 kB] Get:24 http://debian.oregonstate.edu/debian unstable/main amd64 libconfig-tiny-perl all 2.27-1 [17.1 kB] Get:25 http://debian.oregonstate.edu/debian unstable/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get:26 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get:27 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-optlist-perl all 0.112-1 [11.8 kB] Get:28 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-exporter-perl all 0.988-1 [51.9 kB] Get:29 http://debian.oregonstate.edu/debian unstable/main amd64 libconst-fast-perl all 0.014-1.1 [8552 B] Get:30 http://debian.oregonstate.edu/debian unstable/main amd64 libcpanel-json-xs-perl amd64 4.27-1 [129 kB] Get:31 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get:32 http://debian.oregonstate.edu/debian unstable/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:33 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-perl all 0.03+ds1-1.1 [18.4 kB] Get:34 http://debian.oregonstate.edu/debian unstable/main amd64 libiterator-util-perl all 0.02+ds1-1.1 [13.7 kB] Get:35 http://debian.oregonstate.edu/debian unstable/main amd64 libexporter-tiny-perl all 1.002002-1 [37.8 kB] Get:36 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-xs-perl amd64 0.430-2 [40.9 kB] Get:37 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-moreutils-perl all 0.430-2 [46.9 kB] Get:38 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-dpath-perl all 0.58-1 [43.5 kB] Get:39 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-messagepack-perl amd64 1.01-2 [35.5 kB] Get:40 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-domain-tld-perl all 1.75-1.1 [33.5 kB] Get:41 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:42 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:43 http://debian.oregonstate.edu/debian unstable/main amd64 libnet-netmask-perl all 2.0001-1 [32.2 kB] Get:44 http://debian.oregonstate.edu/debian unstable/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-1+b5 [104 kB] Get:45 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-ip-perl all 0.30-1 [21.0 kB] Get:46 http://debian.oregonstate.edu/debian unstable/main amd64 libdata-validate-uri-perl all 0.07-1 [10.7 kB] Get:47 http://debian.oregonstate.edu/debian unstable/main amd64 libdevel-size-perl amd64 0.83-1+b2 [26.1 kB] Get:48 http://debian.oregonstate.edu/debian unstable/main amd64 libemail-address-xs-perl amd64 1.04-1+b3 [28.0 kB] Get:49 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-system-simple-perl all 1.30-1 [28.2 kB] Get:50 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-basedir-perl all 0.09-1 [16.4 kB] Get:51 http://debian.oregonstate.edu/debian unstable/main amd64 libnumber-compare-perl all 0.03-2 [7448 B] Get:52 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-glob-perl all 0.11-2 [8992 B] Get:53 http://debian.oregonstate.edu/debian unstable/main amd64 libfile-find-rule-perl all 0.34-1 [30.6 kB] Get:54 http://debian.oregonstate.edu/debian unstable/main amd64 libfont-ttf-perl all 1.06-1.1 [318 kB] Get:55 http://debian.oregonstate.edu/debian unstable/main amd64 libhtml-html5-entities-perl all 0.004-1.1 [21.3 kB] Get:56 http://debian.oregonstate.edu/debian unstable/main amd64 libimport-into-perl all 1.002005-1 [11.6 kB] Get:57 http://debian.oregonstate.edu/debian unstable/main amd64 libio-interactive-perl all 1.023-1 [11.5 kB] Get:58 http://debian.oregonstate.edu/debian unstable/main amd64 libio-prompt-tiny-perl all 0.003-1 [9150 B] Get:59 http://debian.oregonstate.edu/debian unstable/main amd64 libipc-run3-perl all 0.048-2 [34.2 kB] Get:60 http://debian.oregonstate.edu/debian unstable/main amd64 libjson-maybexs-perl all 1.004003-1 [13.1 kB] Get:61 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-compare-perl all 0.55-1 [66.9 kB] Get:62 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-someutils-perl all 0.58-1 [36.5 kB] Get:63 http://debian.oregonstate.edu/debian unstable/main amd64 liblist-utilsby-perl all 0.11-1 [15.4 kB] Get:64 http://debian.oregonstate.edu/debian unstable/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:65 http://debian.oregonstate.edu/debian unstable/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:66 http://debian.oregonstate.edu/debian unstable/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:67 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-quote-perl all 2.006006-1 [21.0 kB] Get:68 http://debian.oregonstate.edu/debian unstable/main amd64 libmoo-perl all 2.005004-2 [60.4 kB] Get:69 http://debian.oregonstate.edu/debian unstable/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:70 http://debian.oregonstate.edu/debian unstable/main amd64 libmoox-aliases-perl all 0.001006-1.1 [10.8 kB] Get:71 http://debian.oregonstate.edu/debian unstable/main amd64 libmouse-perl amd64 2.5.10-1+b1 [172 kB] Get:72 http://debian.oregonstate.edu/debian unstable/main amd64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get:73 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get:74 http://debian.oregonstate.edu/debian unstable/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get:75 http://debian.oregonstate.edu/debian unstable/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get:76 http://debian.oregonstate.edu/debian unstable/main amd64 libpath-tiny-perl all 0.120-1 [54.7 kB] Get:77 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-gzip-perl amd64 0.19-1+b7 [17.4 kB] Get:78 http://debian.oregonstate.edu/debian unstable/main amd64 libperlio-utf8-strict-perl amd64 0.008-1+b1 [12.0 kB] Get:79 http://debian.oregonstate.edu/debian unstable/main amd64 libproc-processtable-perl amd64 0.634-1 [46.5 kB] Get:80 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-decoder-perl amd64 4.018+ds-1+b1 [99.3 kB] Get:81 http://debian.oregonstate.edu/debian unstable/main amd64 libsereal-encoder-perl amd64 4.018+ds-1+b1 [103 kB] Get:82 http://debian.oregonstate.edu/debian unstable/main amd64 libsort-versions-perl all 1.62-1 [11.0 kB] Get:83 http://debian.oregonstate.edu/debian unstable/main amd64 libxs-parse-keyword-perl amd64 0.21-1 [50.8 kB] Get:84 http://debian.oregonstate.edu/debian unstable/main amd64 libsyntax-keyword-try-perl amd64 0.26-1 [28.7 kB] Get:85 http://debian.oregonstate.edu/debian unstable/main amd64 libterm-readkey-perl amd64 2.38-1+b2 [27.8 kB] Get:86 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-levenshteinxs-perl amd64 0.03-4+b8 [8724 B] Get:87 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-markdown-discount-perl amd64 0.13-1 [13.2 kB] Get:88 http://debian.oregonstate.edu/debian unstable/main amd64 libtext-xslate-perl amd64 3.5.9-1 [197 kB] Get:89 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-duration-perl all 1.21-1 [13.7 kB] Get:90 http://debian.oregonstate.edu/debian unstable/main amd64 libtime-moment-perl amd64 0.44-1+b3 [75.8 kB] Get:91 http://debian.oregonstate.edu/debian unstable/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:92 http://debian.oregonstate.edu/debian unstable/main amd64 libtype-tiny-perl all 1.012004-1 [351 kB] Get:93 http://debian.oregonstate.edu/debian unstable/main amd64 libunicode-utf8-perl amd64 0.62-1+b2 [20.3 kB] Get:94 http://debian.oregonstate.edu/debian unstable/main amd64 liburi-perl all 5.10-1 [91.0 kB] Get:95 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-0-2 amd64 0.2.2-1 [49.6 kB] Get:96 http://debian.oregonstate.edu/debian unstable/main amd64 libyaml-libyaml-perl amd64 0.83+ds-1 [35.5 kB] Get:97 http://debian.oregonstate.edu/debian unstable/main amd64 lzip amd64 1.22-4 [88.2 kB] Get:98 http://debian.oregonstate.edu/debian unstable/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:99 http://debian.oregonstate.edu/debian unstable/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:100 http://debian.oregonstate.edu/debian unstable/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:101 http://debian.oregonstate.edu/debian unstable/main amd64 unzip amd64 6.0-26 [171 kB] Get:102 http://debian.oregonstate.edu/debian unstable/main amd64 lintian all 2.113.0 [1352 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 7885 kB in 0s (27.3 MB/s) Selecting previously unselected package diffstat. (Reading database ... 40671 files and directories currently installed.) Preparing to unpack .../000-diffstat_1.64-1_amd64.deb ... Unpacking diffstat (1.64-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../001-libassuan0_2.5.5-1_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-1) ... Selecting previously unselected package gpgconf. Preparing to unpack .../002-gpgconf_2.2.27-2_amd64.deb ... Unpacking gpgconf (2.2.27-2) ... Selecting previously unselected package libsqlite3-0:amd64. Preparing to unpack .../003-libsqlite3-0_3.36.0-2_amd64.deb ... Unpacking libsqlite3-0:amd64 (3.36.0-2) ... Selecting previously unselected package gpg. Preparing to unpack .../004-gpg_2.2.27-2_amd64.deb ... Unpacking gpg (2.2.27-2) ... Selecting previously unselected package libaliased-perl. Preparing to unpack .../005-libaliased-perl_0.34-1.1_all.deb ... Unpacking libaliased-perl (0.34-1.1) ... Selecting previously unselected package libapt-pkg-perl. 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Unpacking libhtml-html5-entities-perl (0.004-1.1) ... Selecting previously unselected package libimport-into-perl. Preparing to unpack .../054-libimport-into-perl_1.002005-1_all.deb ... Unpacking libimport-into-perl (1.002005-1) ... Selecting previously unselected package libio-interactive-perl. Preparing to unpack .../055-libio-interactive-perl_1.023-1_all.deb ... Unpacking libio-interactive-perl (1.023-1) ... Selecting previously unselected package libio-prompt-tiny-perl. Preparing to unpack .../056-libio-prompt-tiny-perl_0.003-1_all.deb ... Unpacking libio-prompt-tiny-perl (0.003-1) ... Selecting previously unselected package libipc-run3-perl. Preparing to unpack .../057-libipc-run3-perl_0.048-2_all.deb ... Unpacking libipc-run3-perl (0.048-2) ... Selecting previously unselected package libjson-maybexs-perl. Preparing to unpack .../058-libjson-maybexs-perl_1.004003-1_all.deb ... Unpacking libjson-maybexs-perl (1.004003-1) ... 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Unpacking librole-tiny-perl (2.002004-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../065-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../066-libmoo-perl_2.005004-2_all.deb ... Unpacking libmoo-perl (2.005004-2) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../067-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libmoox-aliases-perl. Preparing to unpack .../068-libmoox-aliases-perl_0.001006-1.1_all.deb ... Unpacking libmoox-aliases-perl (0.001006-1.1) ... Selecting previously unselected package libmouse-perl. Preparing to unpack .../069-libmouse-perl_2.5.10-1+b1_amd64.deb ... Unpacking libmouse-perl (2.5.10-1+b1) ... Selecting previously unselected package libpackage-stash-perl. Preparing to unpack .../070-libpackage-stash-perl_0.39-1_all.deb ... Unpacking libpackage-stash-perl (0.39-1) ... Selecting previously unselected package libsub-identify-perl. Preparing to unpack .../071-libsub-identify-perl_0.14-1+b3_amd64.deb ... Unpacking libsub-identify-perl (0.14-1+b3) ... Selecting previously unselected package libsub-name-perl. Preparing to unpack .../072-libsub-name-perl_0.26-1+b1_amd64.deb ... Unpacking libsub-name-perl (0.26-1+b1) ... Selecting previously unselected package libnamespace-clean-perl. Preparing to unpack .../073-libnamespace-clean-perl_0.27-1_all.deb ... Unpacking libnamespace-clean-perl (0.27-1) ... Selecting previously unselected package libpath-tiny-perl. Preparing to unpack .../074-libpath-tiny-perl_0.120-1_all.deb ... Unpacking libpath-tiny-perl (0.120-1) ... Selecting previously unselected package libperlio-gzip-perl. Preparing to unpack .../075-libperlio-gzip-perl_0.19-1+b7_amd64.deb ... Unpacking libperlio-gzip-perl (0.19-1+b7) ... 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Setting up libsereal-decoder-perl (4.018+ds-1+b1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.10-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up gpg (2.2.27-2) ... Setting up libdata-validate-ip-perl (0.30-1) ... Setting up libemail-address-xs-perl (1.04-1+b3) ... Setting up libfile-basedir-perl (0.09-1) ... Setting up liblist-moreutils-perl (0.430-2) ... Setting up libtype-tiny-perl (1.012004-1) ... Setting up libtext-markdown-discount-perl:amd64 (0.13-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up libdata-validate-uri-perl (0.07-1) ... Setting up libdata-optlist-perl (0.112-1) ... Setting up libsub-exporter-perl (0.988-1) ... Setting up libiterator-perl (0.03+ds1-1.1) ... Setting up libiterator-util-perl (0.02+ds1-1.1) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libconst-fast-perl (0.014-1.1) ... 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I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 178560 Build-Time: 251 Distribution: unstable Foreign Architectures: ppc64el Host Architecture: ppc64el Install-Time: 46 Job: tvc_5.0.3+git20151221.80e144e+dfsg-4 Lintian: pass Machine Architecture: amd64 Package: tvc Package-Time: 310 Source-Version: 5.0.3+git20151221.80e144e+dfsg-4 Space: 178560 Status: successful Version: 5.0.3+git20151221.80e144e+dfsg-4 -------------------------------------------------------------------------------- Finished at 2021-11-27T13:30:45Z Build needed 00:05:10, 178560k disk space