sbuild (Debian sbuild) 0.89.3+deb13u4 (28 December 2025) on mjolnir.einval.org +==============================================================================+ | velvet 1.2.10+dfsg1-10 (i386) Mon, 06 Apr 2026 18:33:47 +0000 | +==============================================================================+ Package: velvet Version: 1.2.10+dfsg1-10 Source Version: 1.2.10+dfsg1-10 Distribution: unstable Machine Architecture: arm64 Host Architecture: i386 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any I: Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.oK9Z23oHoC... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Update chroot Mon, 06 Apr 2026 18:34:04 +0000 | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [187 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [11.5 MB] Get:3 http://mirror.einval.org/debian unstable/main arm64 Packages [10.3 MB] Get:4 http://mirror.einval.org/debian unstable/main i386 Packages [10.1 MB] Fetched 32.1 MB in 7s (4316 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: libselinux1 linux-libc-dev 2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 2052 kB of archives. After this operation, 7168 B of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 libselinux1 arm64 3.10-1 [79.9 kB] Get:2 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev all 6.19.11-1 [1972 kB] Fetched 2052 kB in 0s (41.7 MB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12105 files and directories currently installed.) Preparing to unpack .../libselinux1_3.10-1_arm64.deb ... Unpacking libselinux1:arm64 (3.10-1) over (3.9-4+b1) ... Setting up libselinux1:arm64 (3.10-1) ... (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 12104 files and directories currently installed.) Preparing to unpack .../linux-libc-dev_6.19.11-1_all.deb ... Unpacking linux-libc-dev (6.19.11-1) over (6.19.10-1) ... Setting up linux-libc-dev (6.19.11-1) ... Processing triggers for libc-bin (2.42-14) ... +------------------------------------------------------------------------------+ | Fetch source files Mon, 06 Apr 2026 18:34:22 +0000 | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'velvet' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/velvet.git Please use: git clone https://salsa.debian.org/med-team/velvet.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 13.7 MB of source archives. Get:1 http://mirror.einval.org/debian unstable/main velvet 1.2.10+dfsg1-10 (dsc) [2398 B] Get:2 http://mirror.einval.org/debian unstable/main velvet 1.2.10+dfsg1-10 (tar) [13.6 MB] Get:3 http://mirror.einval.org/debian unstable/main velvet 1.2.10+dfsg1-10 (diff) [18.9 kB] Fetched 13.7 MB in 0s (31.7 MB/s) Download complete and in download only mode +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 06 Apr 2026 18:34:24 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, texlive-latex-base, texlive-latex-recommended, libc-dev, libstdc++-dev, build-essential:arm64, crossbuild-essential-i386:arm64, apt-utils:arm64, libc-dev:i386, libstdc++-dev:i386 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, texlive-latex-base, texlive-latex-recommended, libc-dev, libstdc++-dev, build-essential:arm64, crossbuild-essential-i386:arm64, apt-utils:arm64, libc-dev:i386, libstdc++-dev:i386 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-QDIi7x/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ InRelease Get:2 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Release [609 B] Ign:3 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Release.gpg Get:4 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Sources [771 B] Get:5 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Packages [813 B] Fetched 2193 B in 0s (106 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-15-i686-linux-gnu cpp-i686-linux-gnu crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lmodern g++-15-i686-linux-gnu g++-i686-linux-gnu gcc-15-base:i386 gcc-15-cross-base gcc-15-i686-linux-gnu gcc-15-i686-linux-gnu-base gcc-16-base:i386 gcc-16-cross-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1 libc-gconv-modules-extra:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcairo2 libdebhelper-perl libelf1t64 libexpat1 libffi8 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-15-dev:i386 libgcc-15-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libglib2.0-0t64 libgomp1:i386 libgomp1-i386-cross libgraphite2-3 libharfbuzz0b libice6 libicu78 libitm1:i386 libitm1-i386-cross libkpathsea6 libmagic-mgc libmagic1t64 libmpfi0 libncursesw6 libpaper-utils libpaper2 libpipeline1 libpixman-1-0 libpng16-16t64 libpotrace0 libproc2-0 libptexenc1 libquadmath0:i386 libquadmath0-i386-cross libsm6 libstdc++-15-dev:i386 libstdc++-15-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsynctex2 libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-wrapi18n-perl libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring5 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2-16 libxmu6 libxpm4 libxrender1 libxt6t64 libzzip-0-13t64 linux-libc-dev-i386-cross m4 man-db po-debconf procps sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-latex-base texlive-latex-recommended ucf x11-common xdg-utils zlib1g:i386 zlib1g-dev:i386 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-15-locales cpp-15-doc cpp-doc dh-make gcc-15-doc manpages-dev flex bison gdb-i686-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev gnulib-l10n groff glibc-doc:i386 libc-l10n:i386 locales:i386 libnss-nis:i386 libnss-nisplus:i386 manpages-dev:i386 low-memory-monitor libmpfi-doc libstdc++-15-doc:i386 libtool-doc gfortran | fortran95-compiler m4-doc apparmor less www-browser libmail-box-perl ghostscript gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec texlive-binaries-sse2 hintview texlive-latex-base-doc wp2latex texlive-latex-recommended-doc texlive-luatex texlive-pstricks Recommended packages: curl | wget | lynx libidn2-0:i386 libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgpm2 libltdl-dev libmail-sendmail-perl psmisc linux-sysctl-defaults lmodern dvisvgm libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-i686-linux-gnu bsdextrautils cpp-15-i686-linux-gnu cpp-i686-linux-gnu crossbuild-essential-i386 debhelper dh-autoreconf dh-strip-nondeterminism dwz file fontconfig-config fonts-dejavu-core fonts-dejavu-mono fonts-lmodern g++-15-i686-linux-gnu g++-i686-linux-gnu gcc-15-base:i386 gcc-15-cross-base gcc-15-i686-linux-gnu gcc-15-i686-linux-gnu-base gcc-16-base:i386 gcc-16-cross-base gcc-i686-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:i386 libasan8-i386-cross libatomic1:i386 libatomic1-i386-cross libbrotli1 libc-gconv-modules-extra:i386 libc6:i386 libc6-dev:i386 libc6-dev-i386-cross libc6-i386-cross libcairo2 libdebhelper-perl libelf1t64 libexpat1 libffi8 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libgcc-15-dev:i386 libgcc-15-dev-i386-cross libgcc-s1:i386 libgcc-s1-i386-cross libglib2.0-0t64 libgomp1:i386 libgomp1-i386-cross libgraphite2-3 libharfbuzz0b libice6 libicu78 libitm1:i386 libitm1-i386-cross libkpathsea6 libmagic-mgc libmagic1t64 libmpfi0 libncursesw6 libpaper-utils libpaper2 libpipeline1 libpixman-1-0 libpng16-16t64 libpotrace0 libproc2-0 libptexenc1 libquadmath0:i386 libquadmath0-i386-cross libsm6 libstdc++-15-dev:i386 libstdc++-15-dev-i386-cross libstdc++6:i386 libstdc++6-i386-cross libsynctex2 libteckit0 libtexlua53-5 libtext-charwidth-perl libtext-wrapi18n-perl libtool libubsan1:i386 libubsan1-i386-cross libuchardet0 libunistring5 libx11-6 libx11-data libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxi6 libxml2-16 libxmu6 libxpm4 libxrender1 libxt6t64 libzzip-0-13t64 linux-libc-dev-i386-cross m4 man-db po-debconf procps sbuild-build-depends-main-dummy:i386 sensible-utils t1utils tex-common texlive-base texlive-binaries texlive-latex-base texlive-latex-recommended ucf x11-common xdg-utils zlib1g:i386 zlib1g-dev:i386 0 upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 153 MB of archives. After this operation, 570 MB of additional disk space will be used. Get:1 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [936 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 libexpat1 arm64 2.7.5-1 [100.0 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 libncursesw6 arm64 6.6+20251231-1 [125 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-9+b1 [62.4 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 procps arm64 2:4.0.4-9+b1 [871 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5+b1 [338 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5+b1 [103 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.46-5+b1 [44.0 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.23.2-2 [240 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2+b1 [69.1 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-10+b1 [1133 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.42-1 [97.4 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-2 [40.3 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.13.1-1+b1 [1455 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libtext-charwidth-perl arm64 0.04-11+b5 [9644 B] Get:17 http://mirror.einval.org/debian unstable/main arm64 libtext-wrapi18n-perl all 0.06-10 [8808 B] Get:18 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0053 [41.9 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.21-1 [323 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.72-6 [494 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.18.1-4 [877 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.23.2-2 [770 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-15-i686-linux-gnu-base arm64 15.2.0-16cross1 [36.5 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 cpp-15-i686-linux-gnu arm64 15.2.0-16cross1 [11.3 MB] Get:26 http://mirror.einval.org/debian unstable/main arm64 cpp-i686-linux-gnu arm64 4:15.2.0-5 [5320 B] Get:27 http://mirror.einval.org/debian unstable/main arm64 binutils-i686-linux-gnu arm64 2.46-3 [1530 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 gcc-15-cross-base all 15.2.0-16cross1 [31.9 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 gcc-16-cross-base all 16-20260322-1cross1 [31.3 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libc6-i386-cross all 2.42-12cross1 [1449 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-i386-cross all 16-20260322-1cross1 [87.7 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libgomp1-i386-cross all 16-20260322-1cross1 [153 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libitm1-i386-cross all 16-20260322-1cross1 [29.0 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libatomic1-i386-cross all 16-20260322-1cross1 [8252 B] Get:35 http://mirror.einval.org/debian unstable/main arm64 libasan8-i386-cross all 16-20260322-1cross1 [2726 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-i386-cross all 16-20260322-1cross1 [776 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libubsan1-i386-cross all 16-20260322-1cross1 [1106 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-i386-cross all 16-20260322-1cross1 [231 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libgcc-15-dev-i386-cross all 15.2.0-16cross1 [2621 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 gcc-15-i686-linux-gnu arm64 15.2.0-16cross1 [21.8 MB] Get:41 http://mirror.einval.org/debian unstable/main arm64 gcc-i686-linux-gnu arm64 4:15.2.0-5 [1444 B] Get:42 http://mirror.einval.org/debian unstable/main arm64 linux-libc-dev-i386-cross all 6.19.11-1 [12.4 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libc6-dev-i386-cross all 2.42-12cross1 [1834 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libstdc++-15-dev-i386-cross all 15.2.0-16cross1 [2801 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 g++-15-i686-linux-gnu arm64 15.2.0-16cross1 [12.3 MB] Get:46 http://mirror.einval.org/debian unstable/main arm64 g++-i686-linux-gnu arm64 4:15.2.0-5 [1192 B] Get:47 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-i386 all 12.12 [3544 B] Get:48 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.31 [75.7 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.5.4-10 [539 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 22 [12.2 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get:54 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.194-4 [182 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.16-4 [99.2 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libunistring5 arm64 1.4.2-1 [455 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libxml2-16 arm64 2.15.2+dfsg-0.1 [592 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.23.2-2 [1609 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.22 [216 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.31 [932 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 fontconfig-config arm64 2.17.1-5 [56.1 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 fonts-lmodern all 2.005-1 [4540 kB] Get:66 http://mirror.einval.org/debian unstable/main i386 gcc-15-base i386 15.2.0-16 [36.3 kB] Get:67 http://mirror.einval.org/debian unstable/main i386 gcc-16-base i386 16-20260322-1 [35.5 kB] Get:68 http://mirror.einval.org/debian unstable/main i386 libgcc-s1 i386 16-20260322-1 [87.7 kB] Get:69 http://mirror.einval.org/debian unstable/main i386 libc-gconv-modules-extra i386 2.42-14 [1095 kB] Get:70 http://mirror.einval.org/debian unstable/main i386 libc6 i386 2.42-14 [1660 kB] Get:71 http://mirror.einval.org/debian unstable/main i386 libasan8 i386 16-20260322-1 [2734 kB] Get:72 http://mirror.einval.org/debian unstable/main i386 libatomic1 i386 16-20260322-1 [8176 B] Get:73 http://mirror.einval.org/debian unstable/main arm64 libbrotli1 arm64 1.2.0-3 [295 kB] Get:74 http://mirror.einval.org/debian unstable/main i386 libc6-dev i386 2.42-14 [1815 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libpng16-16t64 arm64 1.6.56-1 [276 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libfreetype6 arm64 2.14.3+dfsg-1 [457 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libfontconfig1 arm64 2.17.1-5 [125 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libpixman-1-0 arm64 0.46.4-1+b1 [174 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1+b1 [20.8 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-2 [27.9 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b2 [142 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libx11-data all 2:1.8.13-1 [346 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.13-1 [799 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b2 [115 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b2 [105 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b4 [49.0 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.12-1+b1 [27.2 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 libcairo2 arm64 1.18.4-3 [479 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 libffi8 arm64 3.5.2-4 [22.2 kB] Get:90 http://mirror.einval.org/debian unstable/main i386 libgomp1 i386 16-20260322-1 [153 kB] Get:91 http://mirror.einval.org/debian unstable/main i386 libitm1 i386 16-20260322-1 [28.9 kB] Get:92 http://mirror.einval.org/debian unstable/main i386 libstdc++6 i386 16-20260322-1 [800 kB] Get:93 http://mirror.einval.org/debian unstable/main i386 libubsan1 i386 16-20260322-1 [1107 kB] Get:94 http://mirror.einval.org/debian unstable/main i386 libquadmath0 i386 16-20260322-1 [231 kB] Get:95 http://mirror.einval.org/debian unstable/main i386 libgcc-15-dev i386 15.2.0-16 [2627 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 libglib2.0-0t64 arm64 2.88.0-1 [1426 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-13 [69.2 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libharfbuzz0b arm64 12.3.2-2+b2 [471 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 x11-common all 1:7.7+26 [217 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1+b1 [63.2 kB] Get:101 http://mirror.einval.org/debian unstable/main arm64 libicu78 arm64 78.3-1 [9804 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libkpathsea6 arm64 2025.20250727.75242+ds-5+b2 [152 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libmpfi0 arm64 1.5.4+ds-5 [34.7 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libpaper2 arm64 2.2.5-0.3+b3 [16.6 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libpaper-utils arm64 2.2.5-0.3+b3 [16.3 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libpotrace0 arm64 1.16-2+b3 [23.3 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libptexenc1 arm64 2025.20250727.75242+ds-5+b2 [50.3 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libsm6 arm64 2:1.2.6-1+b1 [36.7 kB] Get:109 http://mirror.einval.org/debian unstable/main i386 libstdc++-15-dev i386 15.2.0-16 [2820 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libsynctex2 arm64 2025.20250727.75242+ds-5+b2 [58.8 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 libteckit0 arm64 2.5.13+ds-1 [331 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libtexlua53-5 arm64 2025.20250727.75242+ds-5+b2 [104 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libxt6t64 arm64 1:1.2.1-1.3+b1 [173 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 libxmu6 arm64 2:1.1.3-4 [55.0 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libxpm4 arm64 1:3.5.17-1+b4 [52.9 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libxaw7 arm64 2:1.0.16-1+b1 [195 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-2 [77.5 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libzzip-0-13t64 arm64 0.13.78+dfsg.1-0.2 [59.4 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4+b2 [57.5 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 tex-common all 6.20 [29.7 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 texlive-binaries arm64 2025.20250727.75242+ds-5+b2 [7439 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 xdg-utils all 1.2.1-2 [75.8 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 texlive-base all 2025.20260124-1 [23.1 MB] Get:124 http://mirror.einval.org/debian unstable/main arm64 texlive-latex-base all 2025.20260124-1 [1340 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 texlive-latex-recommended all 2025.20260124-1 [8520 kB] Get:126 http://mirror.einval.org/debian unstable/main i386 zlib1g i386 1:1.3.dfsg+really1.3.2-3 [86.9 kB] Get:127 http://mirror.einval.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.2-3 [915 kB] Preconfiguring packages ... Fetched 153 MB in 2s (87.8 MB/s) Selecting previously unselected package libexpat1:arm64. (Reading database ... 12104 files and directories currently installed.) Preparing to unpack .../000-libexpat1_2.7.5-1_arm64.deb ... Unpacking libexpat1:arm64 (2.7.5-1) ... Selecting previously unselected package libncursesw6:arm64. Preparing to unpack .../001-libncursesw6_6.6+20251231-1_arm64.deb ... Unpacking libncursesw6:arm64 (6.6+20251231-1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-9+b1_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-9+b1) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-9+b1_arm64.deb ... Unpacking procps (2:4.0.4-9+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. 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Selecting previously unselected package zlib1g:i386. Preparing to unpack .../124-zlib1g_1%3a1.3.dfsg+really1.3.2-3_i386.deb ... Unpacking zlib1g:i386 (1:1.3.dfsg+really1.3.2-3) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../125-zlib1g-dev_1%3a1.3.dfsg+really1.3.2-3_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.3.dfsg+really1.3.2-3) ... Selecting previously unselected package sbuild-build-depends-main-dummy:i386. Preparing to unpack .../126-sbuild-build-depends-main-dummy_0.invalid.0_i386.deb ... Unpacking sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Setting up libc-gconv-modules-extra:i386 (2.42-14) ... Setting up libexpat1:arm64 (2.7.5-1) ... Setting up libpipeline1:arm64 (1.5.8-2) ... Setting up libgraphite2-3:arm64 (1.3.14-13) ... Setting up libpixman-1-0:arm64 (0.46.4-1+b1) ... Setting up libtext-charwidth-perl:arm64 (0.04-11+b5) ... Setting up libxau6:arm64 (1:1.0.11-1+b1) ... Setting up libxdmcp6:arm64 (1:1.1.5-2) ... Setting up libxcb1:arm64 (1.17.0-2+b2) ... Setting up bsdextrautils (2.42-1) ... Setting up libmagic-mgc (1:5.46-5+b1) ... Setting up libxcb-render0:arm64 (1.17.0-2+b2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:arm64 (2.15.2+dfsg-0.1) ... Setting up binutils-i686-linux-gnu (2.46-3) ... Setting up libdebhelper-perl (13.31) ... Setting up libbrotli1:arm64 (1.2.0-3) ... Setting up libmagic1t64:arm64 (1:5.46-5+b1) ... Setting up x11-common (1:7.7+26) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: WARNING: No init system and policy-rc.d missing! Defaulting to block. Setting up gettext-base (0.23.2-2) ... Setting up m4 (1.4.21-1) ... Setting up libxcb-shm0:arm64 (1.17.0-2+b2) ... Setting up gcc-16-base:i386 (16-20260322-1) ... Setting up file (1:5.46-5+b1) ... Setting up libtext-wrapi18n-perl (0.06-10) ... Setting up gcc-16-cross-base (16-20260322-1cross1) ... Setting up libelf1t64:arm64 (0.194-4) ... Setting up libicu78:arm64 (78.3-1) ... Setting up linux-libc-dev-i386-cross (6.19.11-1) ... Setting up autotools-dev (20240727.1) ... Setting up libzzip-0-13t64:arm64 (0.13.78+dfsg.1-0.2) ... Setting up libx11-data (2:1.8.13-1) ... Setting up libteckit0:arm64 (2.5.13+ds-1) ... Setting up t1utils (1.41-4+b2) ... Setting up libtexlua53-5:arm64 (2025.20250727.75242+ds-5+b2) ... Setting up libproc2-0:arm64 (2:4.0.4-9+b1) ... Setting up libunistring5:arm64 (1.4.2-1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:arm64 (1.6.56-1) ... Setting up gcc-15-i686-linux-gnu-base:arm64 (15.2.0-16cross1) ... Setting up autopoint (0.23.2-2) ... Setting up libmpfi0:arm64 (1.5.4+ds-5) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libncursesw6:arm64 (6.6+20251231-1) ... Setting up libkpathsea6:arm64 (2025.20250727.75242+ds-5+b2) ... Setting up autoconf (2.72-6) ... Setting up libffi8:arm64 (3.5.2-4) ... Setting up dwz (0.16-4) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:arm64 (0.0.8-2+b1) ... Setting up procps (2:4.0.4-9+b1) ... Setting up libc6-i386-cross (2.42-12cross1) ... Setting up fonts-lmodern (2.005-1) ... Setting up libx11-6:arm64 (2:1.8.13-1) ... Setting up libpaper2:arm64 (2.2.5-0.3+b3) ... Setting up gcc-15-cross-base (15.2.0-16cross1) ... Setting up gcc-15-base:i386 (15.2.0-16) ... Setting up libquadmath0-i386-cross (16-20260322-1cross1) ... Setting up xdg-utils (1.2.1-2) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up libsynctex2:arm64 (2025.20250727.75242+ds-5+b2) ... Setting up libpotrace0:arm64 (1.16-2+b3) ... Setting up automake (1:1.18.1-4) ... update-alternatives: using /usr/bin/automake-1.18 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up libice6:arm64 (2:1.1.1-1+b1) ... Setting up gettext (0.23.2-2) ... Setting up libxpm4:arm64 (1:3.5.17-1+b4) ... Setting up libxrender1:arm64 (1:0.9.12-1+b1) ... Setting up libtool (2.5.4-10) ... Setting up libatomic1-i386-cross (16-20260322-1cross1) ... Setting up fontconfig-config (2.17.1-5) ... Setting up libxext6:arm64 (2:1.3.4-1+b4) ... Setting up cpp-15-i686-linux-gnu (15.2.0-16cross1) ... Setting up libgomp1-i386-cross (16-20260322-1cross1) ... Setting up libc6-dev-i386-cross (2.42-12cross1) ... Setting up libpaper-utils (2.2.5-0.3+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libgcc-s1-i386-cross (16-20260322-1cross1) ... Setting up dh-autoreconf (22) ... Setting up libglib2.0-0t64:arm64 (2.88.0-1) ... No schema files found: doing nothing. Setting up libptexenc1:arm64 (2025.20250727.75242+ds-5+b2) ... Setting up libfreetype6:arm64 (2.14.3+dfsg-1) ... Setting up libitm1-i386-cross (16-20260322-1cross1) ... Setting up ucf (3.0053) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-10+b1) ... Setting up libharfbuzz0b:arm64 (12.3.2-2+b2) ... Setting up cpp-i686-linux-gnu (4:15.2.0-5) ... Setting up libfontconfig1:arm64 (2.17.1-5) ... Setting up libsm6:arm64 (2:1.2.6-1+b1) ... Setting up libxi6:arm64 (2:1.8.2-2) ... Setting up po-debconf (1.0.22) ... Setting up man-db (2.13.1-1+b1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcairo2:arm64 (1.18.4-3) ... Setting up libasan8-i386-cross (16-20260322-1cross1) ... Setting up libstdc++6-i386-cross (16-20260322-1cross1) ... Setting up tex-common (6.20) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libxt6t64:arm64 (1:1.2.1-1.3+b1) ... Setting up libxmu6:arm64 (2:1.1.3-4) ... Setting up debhelper (13.31) ... Setting up libubsan1-i386-cross (16-20260322-1cross1) ... Setting up libxaw7:arm64 (2:1.0.16-1+b1) ... Setting up libgcc-15-dev-i386-cross (15.2.0-16cross1) ... Setting up libstdc++-15-dev-i386-cross (15.2.0-16cross1) ... Setting up texlive-binaries (2025.20250727.75242+ds-5+b2) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2025.20260124-1) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/tex-ini-files/pdftexconfig.tex Setting up gcc-15-i686-linux-gnu (15.2.0-16cross1) ... Setting up texlive-latex-base (2025.20260124-1) ... Setting up g++-15-i686-linux-gnu (15.2.0-16cross1) ... Setting up texlive-latex-recommended (2025.20260124-1) ... Setting up gcc-i686-linux-gnu (4:15.2.0-5) ... Setting up g++-i686-linux-gnu (4:15.2.0-5) ... Setting up crossbuild-essential-i386 (12.12) ... Setting up libgcc-s1:i386 (16-20260322-1) ... Setting up libc6:i386 (2.42-14) ... Setting up libasan8:i386 (16-20260322-1) ... Setting up libc6-dev:i386 (2.42-14) ... Setting up libstdc++6:i386 (16-20260322-1) ... Setting up libitm1:i386 (16-20260322-1) ... Setting up zlib1g:i386 (1:1.3.dfsg+really1.3.2-3) ... Setting up libgomp1:i386 (16-20260322-1) ... Setting up libquadmath0:i386 (16-20260322-1) ... Setting up libatomic1:i386 (16-20260322-1) ... Setting up libubsan1:i386 (16-20260322-1) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg+really1.3.2-3) ... Setting up libgcc-15-dev:i386 (15.2.0-16) ... Setting up libstdc++-15-dev:i386 (15.2.0-16) ... Setting up sbuild-build-depends-main-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.42-14) ... Processing triggers for tex-common (6.20) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. +------------------------------------------------------------------------------+ | Check architectures Mon, 06 Apr 2026 18:37:39 +0000 | +------------------------------------------------------------------------------+ Arch check ok (i386 included in any all) +------------------------------------------------------------------------------+ | Build environment Mon, 06 Apr 2026 18:37:40 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.57+deb13-arm64 #1 SMP Debian 6.12.57-1 (2025-11-05) arm64 (aarch64) Toolchain package versions: binutils_2.46-3 dpkg-dev_1.23.7 g++-15_15.2.0-16 gcc-15_15.2.0-16 libc6-dev_2.42-14 libstdc++-15-dev_15.2.0-16 libstdc++-15-dev-i386-cross_15.2.0-16cross1 libstdc++6_16-20260322-1 libstdc++6-i386-cross_16-20260322-1cross1 linux-libc-dev_6.19.11-1 Package versions: apt_3.1.16 apt-utils_3.1.16 autoconf_2.72-6 automake_1:1.18.1-4 autopoint_0.23.2-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8+b1 bash_5.3-2 binutils_2.46-3 binutils-aarch64-linux-gnu_2.46-3 binutils-common_2.46-3 binutils-i686-linux-gnu_2.46-3 bsdextrautils_2.42-1 build-essential_12.12 bzip2_1.0.8-6+b1 coreutils_9.10-1 cpp_4:15.2.0-5 cpp-15_15.2.0-16 cpp-15-aarch64-linux-gnu_15.2.0-16 cpp-15-i686-linux-gnu_15.2.0-16cross1 cpp-aarch64-linux-gnu_4:15.2.0-5 cpp-i686-linux-gnu_4:15.2.0-5 crossbuild-essential-i386_12.12 dash_0.5.12-12+b1 debconf_1.5.92 debhelper_13.31 debian-archive-keyring_2025.1 debianutils_5.23.2+b1 dh-autoreconf_22 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1+b1 dpkg_1.23.7 dpkg-dev_1.23.7 dwz_0.16-4 file_1:5.46-5+b1 findutils_4.10.0-3+b1 fontconfig-config_2.17.1-5 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 g++_4:15.2.0-5 g++-15_15.2.0-16 g++-15-aarch64-linux-gnu_15.2.0-16 g++-15-i686-linux-gnu_15.2.0-16cross1 g++-aarch64-linux-gnu_4:15.2.0-5 g++-i686-linux-gnu_4:15.2.0-5 gcc_4:15.2.0-5 gcc-15_15.2.0-16 gcc-15-aarch64-linux-gnu_15.2.0-16 gcc-15-base_15.2.0-16 gcc-15-cross-base_15.2.0-16cross1 gcc-15-i686-linux-gnu_15.2.0-16cross1 gcc-15-i686-linux-gnu-base_15.2.0-16cross1 gcc-16-base_16-20260322-1 gcc-16-cross-base_16-20260322-1cross1 gcc-aarch64-linux-gnu_4:15.2.0-5 gcc-i686-linux-gnu_4:15.2.0-5 gettext_0.23.2-2 gettext-base_0.23.2-2 grep_3.12-1+b1 groff-base_1.23.0-10+b1 gzip_1.13-1+b1 hostname_3.25+b1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-3 libapt-pkg7.0_3.1.16 libarchive-zip-perl_1.68-1 libasan8_16-20260322-1 libasan8-i386-cross_16-20260322-1cross1 libatomic1_16-20260322-1 libatomic1-i386-cross_16-20260322-1cross1 libattr1_1:2.5.2-4 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.46-3 libblkid1_2.42-1 libbrotli1_1.2.0-3 libbz2-1.0_1.0.8-6+b1 libc-bin_2.42-14 libc-dev-bin_2.42-14 libc-gconv-modules-extra_2.42-14 libc6_2.42-14 libc6-dev_2.42-14 libc6-dev-i386-cross_2.42-12cross1 libc6-i386-cross_2.42-12cross1 libcairo2_1.18.4-3 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perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.22 procps_2:4.0.4-9+b1 rpcsvc-proto_1.4.3-1+b2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2+b2 sensible-utils_0.0.26 sqv_1.3.0-5 sysvinit-utils_3.18-1 t1utils_1.41-4+b2 tar_1.35+dfsg-4 tex-common_6.20 texlive-base_2025.20260124-1 texlive-binaries_2025.20250727.75242+ds-5+b2 texlive-latex-base_2025.20260124-1 texlive-latex-recommended_2025.20260124-1 ucf_3.0053 util-linux_2.42-1 x11-common_1:7.7+26 xdg-utils_1.2.1-2 xz-utils_5.8.2-2 zlib1g_1:1.3.dfsg+really1.3.2-3 zlib1g-dev_1:1.3.dfsg+really1.3.2-3 +------------------------------------------------------------------------------+ | Build Mon, 06 Apr 2026 18:37:40 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: velvet Binary: velvet, velvet-long, velvet-example, velvet-tests Architecture: any all Version: 1.2.10+dfsg1-10 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille Homepage: https://github.com/dzerbino/velvet Standards-Version: 4.7.3 Vcs-Browser: https://salsa.debian.org/med-team/velvet Vcs-Git: https://salsa.debian.org/med-team/velvet.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev, texlive-latex-base, texlive-latex-recommended Package-List: velvet deb science optional arch=any velvet-example deb science optional arch=all velvet-long deb science optional arch=any velvet-tests deb science optional arch=all Checksums-Sha1: f5ade530e902bdf69532648429a91c00f3a1ad2d 13630488 velvet_1.2.10+dfsg1.orig.tar.xz fee205b212c95b92bf16797be32d63f003cdd4c0 18864 velvet_1.2.10+dfsg1-10.debian.tar.xz Checksums-Sha256: 368d760ad56ffa010a2ae72b25d46680ecb7ad8cc573cf6c389848c87b32ee26 13630488 velvet_1.2.10+dfsg1.orig.tar.xz 238d0ed9249b09b0aa0a583c5efb2621e50fd36cf5bb764164d2fd88115b6b6f 18864 velvet_1.2.10+dfsg1-10.debian.tar.xz Files: 7a58a6d75cdc8b89d1c605033050bbcf 13630488 velvet_1.2.10+dfsg1.orig.tar.xz b4b51657581ecda5a1971296806661ad 18864 velvet_1.2.10+dfsg1-10.debian.tar.xz Dgit: f1c19f7c324807f008f3464e6cfcaa667324b131 debian archive/debian/1.2.10+dfsg1-10 https://git.dgit.debian.org/velvet -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmloCbQUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrZ2w//YO3FKvDdiYOp0IfZUALn+bH6jgBA VBqAqTD6OiyiypLPGpSZbjJhTBtl70AeLSsNpLpNb7kS+QRawnoh5tZKNc8SjQ7V fgAS0rY8ylQ/izP6A0iBmiuOksGcUqsEfQY3dYLMcR1UjTz/SnDpjKLkFex0azMD 9YwUlwa3rTuEHraR7Tprpabg5z5BQXv44ZoSR6PCIljLbIbN1xbhrBRSvrw/Y8Ix RpNYGdfgI20+afOlZG0vtP2/XVi5UGOp1TT2YAP3+AfWDy8jOxXLNR1tjX7Z2szo d67mN1XC+TdjCqz79eAarwI9U0kNU0NIzKXAaWAGZT4oo3OkFPRHLmHWbx/LjYnF 9V3P3LGm28bOLZ4W5jEJt21PiuARVv/Sn/ULXpWUhBIi2QaqcXJUHJhddisX3YI9 +/W0gtmNqacYDb2LaojHckn077//t8p2ubKlbCvD9OUduzCQBxSWI+8bIvJZled+ Ojx3hmUD0wiUCqXOT2osrgSLw2D/+/UUQDssGJoz2NlusHHkDlT6t8t4705TF2xW 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include_debians_zlib.patch dpkg-source: info: applying shuffleSequences_fasta.patch dpkg-source: info: applying fix-perl-path.patch dpkg-source: info: applying 0001-isCreateBinary-should-not-be-inline.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying gcc-14.patch dpkg-source: info: applying stabilize-makefile.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.i386 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ai386 -Pcross,nocheck -us -uc -B --jobs-try=1 dpkg-buildpackage: info: source package velvet dpkg-buildpackage: info: source version 1.2.10+dfsg1-10 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type i686-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' # If tarball was not pre-cleaned this will do it. dh_auto_clean make -j1 clean make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' rm obj/*.o obj/dbg/*.o ./velvet* rm: cannot remove 'obj/*.o': No such file or directory rm: cannot remove 'obj/dbg/*.o': No such file or directory rm: cannot remove './velvet*': No such file or directory make[2]: [Makefile:45: clean] Error 1 (ignored) rm -f doc/manual_src/Manual.toc doc/manual_src/Manual.aux doc/manual_src/Manual.out doc/manual_src/Manual.log rm -f doc/manual_src/Columbus_manual.aux doc/manual_src/Columbus_manual.out doc/manual_src/Columbus_manual.log make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' rm -rf zlib rm -rf third-party rm -rf debian.upstream rm -f *.pdf find -name '._*' -delete rm -rf contrib/MetaVelvet* rm -rf contrib/VelvetOptimiser* make[1]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' touch zlib #Make _long version dh_auto_build -- LONGSEQUENCES=Y OPENMP=Y velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc LONGSEQUENCES=Y OPENMP=Y velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make objdir make[3]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mkdir -p obj make[3]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make obj/tightString.o obj/run.o obj/splay.o obj/splayTable.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/scaffold.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o make[3]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/tightString.c -o obj/tightString.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/run.c -o obj/run.o In file included from src/run.h:34, from src/run.c:31: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/splay.c -o obj/splay.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/splayTable.c -o obj/splayTable.o src/splayTable.c: In function ‘scanReferenceSequences’: src/splayTable.c:877:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 877 | fgets(line, MAXLINE, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/splayTable.c: In function ‘scanBinaryReferenceSequences’: src/splayTable.c:933:17: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 933 | fgets(line, MAXLINE, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/splayTable.c:949:25: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 949 | fgets(line, MAXLINE, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/splayTable.c: In function ‘inputSequenceArrayIntoSplayTableAndArchive’: src/splayTable.c:1207:41: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1207 | fgets(line, MAXLINE, seqFile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/splayTable.c:1213:41: warning: ignoring return value of ‘fgets’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1213 | fgets(line, MAXLINE, seqFile); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/graph.c -o obj/graph.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/run2.c -o obj/run2.o In file included from src/run.h:34, from src/run2.c:26: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/fibHeap.c -o obj/fibHeap.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/fib.c -o obj/fib.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/concatenatedGraph.c -o obj/concatenatedGraph.o In file included from src/concatenatedGraph.c:25: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/passageMarker.c -o obj/passageMarker.o In file included from src/passageMarker.c:29: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/graphStats.c -o obj/graphStats.o src/graphStats.c: In function ‘collectReferenceCoords’: src/graphStats.c:1961:64: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘long long int’ [-Wformat=] 1961 | sprintf(refCoords[refIndex].name, "PLACEHLDR.%ld PLACEHOLDER000", (int64_t) refIndex + 1); | ~~^ ~~~~~~~~~~~~~~~~~~~~~~ | | | | long int long long int | %lld In file included from src/graphStats.c:28: src/graph.h: At top level: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/correctedGraph.c -o obj/correctedGraph.o In file included from src/correctedGraph.c:26: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/dfib.c -o obj/dfib.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/dfibHeap.c -o obj/dfibHeap.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/recycleBin.c -o obj/recycleBin.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/readSet.c -o obj/readSet.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/binarySequences.c -o obj/binarySequences.o src/binarySequences.c: In function ‘importCnyReadSet’: src/binarySequences.c:304:90: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 304 | velvetLog("array location 0x%lx for seq %ld beyond end 0x%lx\n", (uint64_t) tmp, (uint64_t) sequenceIndex, (uint64_t) arrayEnd); | ^ src/binarySequences.c:304:132: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 304 | velvetLog("array location 0x%lx for seq %ld beyond end 0x%lx\n", (uint64_t) tmp, (uint64_t) sequenceIndex, (uint64_t) arrayEnd); | ^ src/binarySequences.c:304:55: warning: format ‘%lx’ expects argument of type ‘long unsigned int’, but argument 2 has type ‘long long unsigned int’ [-Wformat=] 304 | velvetLog("array location 0x%lx for seq %ld beyond end 0x%lx\n", (uint64_t) tmp, (uint64_t) sequenceIndex, (uint64_t) arrayEnd); | ~~^ ~~~~~~~~~~~~~~ | | | | long unsigned int long long unsigned int | %llx src/binarySequences.c:304:67: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘long long unsigned int’ [-Wformat=] 304 | velvetLog("array location 0x%lx for seq %ld beyond end 0x%lx\n", (uint64_t) tmp, (uint64_t) sequenceIndex, (uint64_t) arrayEnd); | ~~^ ~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long int long long unsigned int | %lld src/binarySequences.c:304:84: warning: format ‘%lx’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘long long unsigned int’ [-Wformat=] 304 | velvetLog("array location 0x%lx for seq %ld beyond end 0x%lx\n", (uint64_t) tmp, (uint64_t) sequenceIndex, (uint64_t) arrayEnd); | ~~^ ~~~~~~~~~~~~~~~~~~~ | | | | long unsigned int long long unsigned int | %llx src/binarySequences.c: In function ‘moveCnySeqNucleotides’: src/binarySequences.c:389:36: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 389 | velvetLog("CnySeq bufIdx %ld too large\n", bufIdx); | ~~^ ~~~~~~ | | | | long int uint64_t {aka long long unsigned int} | %lld i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/shortReadPairs.c -o obj/shortReadPairs.o In file included from src/shortReadPairs.c:27: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/locallyCorrectedGraph.c -o obj/locallyCorrectedGraph.o In file included from src/locallyCorrectedGraph.c:25: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/graphReConstruction.c -o obj/graphReConstruction.o In file included from src/graphReConstruction.c:33: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/roadMap.c -o obj/roadMap.o In file included from src/roadMap.c:26: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/preGraph.c -o obj/preGraph.o src/preGraph.c: In function ‘addPreArcToPreNode_pg’: src/preGraph.c:165:29: warning: taking address of packed member of ‘struct preNode_st’ may result in an unaligned pointer value [-Waddress-of-packed-member] 165 | preArcPtr = &(preNode->preArcRight); | ^~~~~~~~~~~~~~~~~~~~~~~ src/preGraph.c:167:29: warning: taking address of packed member of ‘struct preNode_st’ may result in an unaligned pointer value [-Waddress-of-packed-member] 167 | preArcPtr = &(preNode->preArcLeft); | ^~~~~~~~~~~~~~~~~~~~~~ src/preGraph.c: In function ‘removePreArcFromList_pg’: src/preGraph.c:285:29: warning: taking address of packed member of ‘struct preNode_st’ may result in an unaligned pointer value [-Waddress-of-packed-member] 285 | preArcPtr = &(preNode->preArcRight); | ^~~~~~~~~~~~~~~~~~~~~~~ src/preGraph.c:287:29: warning: taking address of packed member of ‘struct preNode_st’ may result in an unaligned pointer value [-Waddress-of-packed-member] 287 | preArcPtr = &(preNode->preArcLeft); | ^~~~~~~~~~~~~~~~~~~~~~ In file included from src/run.h:34, from src/preGraph.c:35: src/graph.h: At top level: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/preGraphConstruction.c -o obj/preGraphConstruction.o src/preGraphConstruction.c: In function ‘createPreNodes’: src/preGraphConstruction.c:525:72: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 2 has type ‘long long unsigned int’ [-Wformat=] 525 | velvetLog("readIndex %ld beyond string len %ld\n", (uint64_t) readIndex, (uint64_t) tString->length); | ~~^ ~~~~~~~~~~~~~~~~~~~~ | | | | long int long long unsigned int | %lld src/preGraphConstruction.c:525:94: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘long long unsigned int’ [-Wformat=] 525 | velvetLog("readIndex %ld beyond string len %ld\n", (uint64_t) readIndex, (uint64_t) tString->length); | ~~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~ | | | | long int long long unsigned int | %lld i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/concatenatedPreGraph.c -o obj/concatenatedPreGraph.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/readCoherentGraph.c -o obj/readCoherentGraph.o In file included from src/readCoherentGraph.c:25: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/utility.c -o obj/utility.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/kmer.c -o obj/kmer.o src/kmer.c: In function ‘pushNucleotide’: src/kmer.c:419:15: warning: taking address of packed member of ‘struct kmer_st’ may result in an unaligned pointer value [-Waddress-of-packed-member] 419 | ptr = kmer->longlongs; | ^~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/scaffold.c -o obj/scaffold.o In file included from src/scaffold.c:32: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/kmerOccurenceTable.c -o obj/kmerOccurenceTable.o In file included from src/kmerOccurenceTable.c:27: src/graph.h:178:20: warning: inline function ‘setShortReadMarkerOffset’ declared but never defined 178 | extern inline void setShortReadMarkerOffset(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:177:27: warning: inline function ‘getShortReadMarkerOffset’ declared but never defined 177 | extern inline ShortLength getShortReadMarkerOffset(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:174:20: warning: inline function ‘setShortReadMarkerPosition’ declared but never defined 174 | extern inline void setShortReadMarkerPosition(ShortReadMarker * marker, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ src/graph.h:173:26: warning: inline function ‘getShortReadMarkerPosition’ declared but never defined 173 | extern inline Coordinate getShortReadMarkerPosition(ShortReadMarker * marker); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/allocArray.c -o obj/allocArray.o i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -D MAXKMERLENGTH=31 -D CATEGORIES=2 -D LONGSEQUENCES -c src/autoOpen.c -o obj/autoOpen.o src/autoOpen.c: In function ‘popenNoStderr’: src/autoOpen.c:28:17: warning: ignoring return value of ‘dup’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 28 | dup(out[1]); | ^~~~~~~~~~~ make[3]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velveth obj/tightString.o obj/run.o obj/recycleBin.o obj/splay.o obj/splayTable.o obj/readSet.o obj/binarySequences.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/autoOpen.o -lz -lm i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velvetg obj/tightString.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/scaffold.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mv velveth velveth_long ; mv velvetg velvetg_long #Make _63 kmer version dh_auto_build -- MAXKMERLENGTH=63 velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc MAXKMERLENGTH=63 velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velveth obj/tightString.o obj/run.o obj/recycleBin.o obj/splay.o obj/splayTable.o obj/readSet.o obj/binarySequences.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/autoOpen.o -lz -lm i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velvetg obj/tightString.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/scaffold.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mv velveth velveth_63 ; mv velvetg velvetg_63 #And also one with both options dh_auto_build -- MAXKMERLENGTH=63 LONGSEQUENCES=Y OPENMP=Y velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc MAXKMERLENGTH=63 LONGSEQUENCES=Y OPENMP=Y velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velveth obj/tightString.o obj/run.o obj/recycleBin.o obj/splay.o obj/splayTable.o obj/readSet.o obj/binarySequences.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/autoOpen.o -lz -lm i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velvetg obj/tightString.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/scaffold.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mv velveth velveth_63_long ; mv velvetg velvetg_63_long #Make _127 kmer version dh_auto_build -- MAXKMERLENGTH=127 velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc MAXKMERLENGTH=127 velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velveth obj/tightString.o obj/run.o obj/recycleBin.o obj/splay.o obj/splayTable.o obj/readSet.o obj/binarySequences.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/autoOpen.o -lz -lm i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velvetg obj/tightString.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/scaffold.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mv velveth velveth_127 ; mv velvetg velvetg_127 #And also one with both options dh_auto_build -- MAXKMERLENGTH=127 LONGSEQUENCES=Y OPENMP=Y velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc MAXKMERLENGTH=127 LONGSEQUENCES=Y OPENMP=Y velveth velvetg OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velveth obj/tightString.o obj/run.o obj/recycleBin.o obj/splay.o obj/splayTable.o obj/readSet.o obj/binarySequences.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/autoOpen.o -lz -lm i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velvetg obj/tightString.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/scaffold.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mv velveth velveth_127_long ; mv velvetg velvetg_127_long touch zlib # prevents the zlib in the ‘third-party’ folder to be built. dh_auto_build -- OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make objdir make[3]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mkdir -p obj make[3]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make obj/tightString.o obj/run.o obj/splay.o obj/splayTable.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/scaffold.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o make[3]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make[3]: 'obj/tightString.o' is up to date. make[3]: 'obj/run.o' is up to date. make[3]: 'obj/splay.o' is up to date. make[3]: 'obj/splayTable.o' is up to date. make[3]: 'obj/graph.o' is up to date. make[3]: 'obj/run2.o' is up to date. make[3]: 'obj/fibHeap.o' is up to date. make[3]: 'obj/fib.o' is up to date. make[3]: 'obj/concatenatedGraph.o' is up to date. make[3]: 'obj/passageMarker.o' is up to date. make[3]: 'obj/graphStats.o' is up to date. make[3]: 'obj/correctedGraph.o' is up to date. make[3]: 'obj/dfib.o' is up to date. make[3]: 'obj/dfibHeap.o' is up to date. make[3]: 'obj/recycleBin.o' is up to date. make[3]: 'obj/readSet.o' is up to date. make[3]: 'obj/binarySequences.o' is up to date. make[3]: 'obj/shortReadPairs.o' is up to date. make[3]: 'obj/locallyCorrectedGraph.o' is up to date. make[3]: 'obj/graphReConstruction.o' is up to date. make[3]: 'obj/roadMap.o' is up to date. make[3]: 'obj/preGraph.o' is up to date. make[3]: 'obj/preGraphConstruction.o' is up to date. make[3]: 'obj/concatenatedPreGraph.o' is up to date. make[3]: 'obj/readCoherentGraph.o' is up to date. make[3]: 'obj/utility.o' is up to date. make[3]: 'obj/kmer.o' is up to date. make[3]: 'obj/scaffold.o' is up to date. make[3]: 'obj/kmerOccurenceTable.o' is up to date. make[3]: 'obj/allocArray.o' is up to date. make[3]: 'obj/autoOpen.o' is up to date. make[3]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velveth obj/tightString.o obj/run.o obj/recycleBin.o obj/splay.o obj/splayTable.o obj/readSet.o obj/binarySequences.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/autoOpen.o -lz -lm i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velvetg obj/tightString.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/scaffold.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm cd doc/manual_src; pdflatex Manual.tex; pdflatex Manual.tex; mv Manual.pdf ../..; pdflatex Columbus_manual.tex; mv Columbus_manual.pdf ../.. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Manual.tex LaTeX2e <2025-11-01> L3 programming layer <2026-01-19> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2025/01/22 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) No file Manual.aux. (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/grfext/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) No file Manual.toc. [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] Overfull \hbox (17.24684pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 16 nodes and n50 of 24184, max 44966, tota l 100080,[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 59--59 []\OT1/cmtt/m/n/10 > ./velvetg sillyDirectory -cov_cutoff 5 -read_trkg yes -amo s_file yes[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] Overfull \hbox (17.24684pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 12 nodes and n50 of 99975, max 99975, tota l 100165,[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] Overfull \hbox (69.74638pt too wide) in paragraph at lines 59--59 []\OT1/cmtt/m/n/10 > ./velveth sillyDirectory 21 -short data/test_reads.fa -lon g data/test_long.fa[] Overfull \hbox (17.24684pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 10 nodes and n50 of 80927, max 80927, tota l 100122,[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] [2] LaTeX Warning: Reference `sec:kmercov' on page 3 undefined on input line 115. [3] Overfull \hbox (9.77472pt too wide) in paragraph at lines 159--161 \OT1/cmr/m/n/10 ma-chine. You might have to set the en-vi-ron-ment vari-ables O MP[]NUM[]THREADS Overfull \hbox (11.18709pt too wide) in paragraph at lines 159--161 \OT1/cmr/m/n/10 and OMP[]THREAD[]LIMIT. Vel-vet will the use up to $\OML/cmm/m/ it/10 OMP[]NUM[]THREADS \OT1/cmr/m/n/10 + Overfull \hbox (16.93419pt too wide) in paragraph at lines 159--161 [][]\OT1/cmr/m/n/10 http://www.ats.ucla.edu/clusters/common/computing/parallel/ using[]openmp.htm[][] [4] LaTeX Warning: Reference `sec:kmercov' on page 5 undefined on input line 192. [5] Overfull \hbox (101.24611pt too wide) in paragraph at lines 223--223 []\OT1/cmtt/m/n/10 > ./velveth output_directory/ 21 -fasta -short solexa1.fa so lexa2.fa solexa3.fa -long[] Overfull \hbox (17.24684pt too wide) in paragraph at lines 241--241 []\OT1/cmtt/m/n/10 > velveth directory 21 -fastq other_reads.fastq -fasta selec ted_reads[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 248--248 []\OT1/cmtt/m/n/10 > myprogram | velveth directory 21 -fastq other_reads.fastq -fasta -[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 256--256 []\OT1/cmtt/m/n/10 > ./velveth output_directory/ 21 (...data files...) -strand_ specific[] [6] [7] LaTeX Warning: Reference `sec:covcutoff' on page 8 undefined on input line 331. Overfull \hbox (43.49661pt too wide) in paragraph at lines 341--341 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_coverage 300 (... other p arameters ...)[] LaTeX Warning: Reference `sec:hashing' on page 8 undefined on input line 354. LaTeX Warning: Reference `sec:kmercov' on page 8 undefined on input line 358. LaTeX Warning: Reference `sec:expcov' on page 8 undefined on input line 358. Overfull \hbox (11.99689pt too wide) in paragraph at lines 362--362 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -exp_cov 19 (... other paramet ers ...)[] [8] Overfull \hbox (22.4968pt too wide) in paragraph at lines 368--368 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -exp_cov auto (... other param eters ...)[] LaTeX Warning: Reference `sec:hashing' on page 9 undefined on input line 377. LaTeX Warning: Reference `sec:kmercov' on page 9 undefined on input line 379. LaTeX Warning: Reference `sec:pairedformat' on page 9 undefined on input line 3 95. Overfull \hbox (22.4968pt too wide) in paragraph at lines 406--406 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -exp_cov auto (... other param eters ...)[] [9] [10] Overfull \hbox (32.9967pt too wide) in paragraph at lines 451--451 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -read_trkg yes (... other par ameters ...)[] LaTeX Warning: Reference `sec:amos' on page 11 undefined on input line 455. Overfull \hbox (32.9967pt too wide) in paragraph at lines 459--459 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -amos_file yes (... other par ameters ...)[] LaTeX Warning: Reference `sec:hashing' on page 11 undefined on input line 470. Overfull \hbox (48.74657pt too wide) in paragraph at lines 489--489 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -unused_reads yes (... other parameters ...)[] Overfull \hbox (5.18578pt too wide) in paragraph at lines 497--498 []$[]$\OT1/cmr/m/n/10 . If set LaTeX Warning: Reference `sec:paper' on page 11 undefined on input line 499. [11] Overfull \hbox (59.24648pt too wide) in paragraph at lines 514--514 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_branch_length 200 (...oth er parameters...)[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 522--522 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_divergence 0.33 (...other parameters...)[] Overfull \hbox (27.74675pt too wide) in paragraph at lines 530--530 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_gap_count 5 (...other par ameters...)[] [12] Overfull \hbox (38.24666pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -min_pair_count 20 (...other p arameters...)[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 575--575 []\OT1/cmtt/m/n/10 > ./shuffleSequences_fasta.pl forward_reads.fa reverse_reads .fa output.fa[] [13] LaTeX Warning: Reference `sec:kmercov' on page 14 undefined on input line 593. LaTeX Warning: Reference `sec:kmercov' on page 14 undefined on input line 605. Overfull \hbox (8.06886pt too wide) in paragraph at lines 605--606 []\OT1/cmr/m/n/10 The cov-er-ages in columns \OT1/cmr/m/it/10 short1[]cov\OT1/c mr/m/n/10 , \OT1/cmr/m/it/10 short1[]Ocov\OT1/cmr/m/n/10 , \OT1/cmr/m/it/10 sho rt2[]cov\OT1/cmr/m/n/10 , and \OT1/cmr/m/it/10 short2[]Ocov LaTeX Warning: Reference `sec:fasta' on page 14 undefined on input line 615. [14] Overfull \hbox (73.7466pt too wide) in paragraph at lines 638--638 []\OT1/cmtt/m/n/10 NODE $NODE_ID $COV_SHORT1 $O_COV_SHORT1 $COV_SHORT 2 $O_COV_SHORT2[] LaTeX Warning: Reference `sec:stats' on page 15 undefined on input line 642. Overfull \hbox (36.99692pt too wide) in paragraph at lines 656--656 []\OT1/cmtt/m/n/10 $NODE_ID $OFFSET_FROM_START $START_COORD $END_COORD $OFFSET _FROM_END[] [15] LaTeX Warning: Reference `sec:maxlength' on page 16 undefined on input line 683 . LaTeX Warning: Reference `sec:paper' on page 16 undefined on input line 695. LaTeX Warning: Reference `sec:kmercov' on page 16 undefined on input line 695. [16] [17 <./Suis_plot_1.pdf>] [18 <./suis_plot.pdf>] Overfull \hbox (16.9262pt too wide) in paragraph at lines 768--769 []\OT1/cmr/m/n/10 by Torsten See-man (torsten.seemann@infotech.monash.edu.au) [19] Overfull \hbox (47.5168pt too wide) in paragraph at lines 786--787 []\OT1/cmr/m/n/10 by Eric Cabot (ecabot@wisc.edu) Pe-ter (pe-ter@maubp.freeserv e.co.uk) [20] [21] (./Manual.aux) kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcrm1000 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcrm1000 This is METAFONT, Version 2.71828182 (TeX Live 2025/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm1000.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf Ok [100] [109] [98] [99] [108]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44] [45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95] [96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174] [175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf Ok [185] [178] [179] [170] [186]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf Ok [188] [189] [190]) ) ) ) (some charht values had to be adjusted by as much as 0.06943pt) Font metrics written on tcrm1000.tfm. Output written on tcrm1000.600gf (128 characters, 23548 bytes). Transcript written on tcrm1000.log. mktexpk: /build/reproducible-path/velvet-1.2.10+dfsg1/debian/.debhelper/generated/_source/home/.texlive2025/texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1000.600pk: successfully generated. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `Manual.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on Manual.pdf (21 pages, 431098 bytes). Transcript written on Manual.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Manual.tex LaTeX2e <2025-11-01> L3 programming layer <2026-01-19> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2025/01/22 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty))) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def))) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) (./Manual.aux) (/usr/share/texlive/texmf-dist/tex/latex/graphics/color.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (./Manual.out ) (./Manual.out) (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/grfext/grfext.sty) (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (./Manual.toc [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}]) [2] Overfull \hbox (17.24684pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 16 nodes and n50 of 24184, max 44966, tota l 100080,[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 59--59 []\OT1/cmtt/m/n/10 > ./velvetg sillyDirectory -cov_cutoff 5 -read_trkg yes -amo s_file yes[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] Overfull \hbox (17.24684pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 12 nodes and n50 of 99975, max 99975, tota l 100165,[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] Overfull \hbox (69.74638pt too wide) in paragraph at lines 59--59 []\OT1/cmtt/m/n/10 > ./velveth sillyDirectory 21 -short data/test_reads.fa -lon g data/test_long.fa[] Overfull \hbox (17.24684pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 10 nodes and n50 of 80927, max 80927, tota l 100122,[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 59--59 [] \OT1/cmtt/m/n/10 (Final graph has 1 nodes and n50 of 99975, max 99975, total 99975,[] [3] [4] Overfull \hbox (9.77472pt too wide) in paragraph at lines 159--161 \OT1/cmr/m/n/10 ma-chine. You might have to set the en-vi-ron-ment vari-ables O MP[]NUM[]THREADS Overfull \hbox (11.18709pt too wide) in paragraph at lines 159--161 \OT1/cmr/m/n/10 and OMP[]THREAD[]LIMIT. Vel-vet will the use up to $\OML/cmm/m/ it/10 OMP[]NUM[]THREADS \OT1/cmr/m/n/10 + Overfull \hbox (16.93419pt too wide) in paragraph at lines 159--161 [][]\OT1/cmr/m/n/10 http://www.ats.ucla.edu/clusters/common/computing/parallel/ using[]openmp.htm[][] [5] [6] Overfull \hbox (101.24611pt too wide) in paragraph at lines 223--223 []\OT1/cmtt/m/n/10 > ./velveth output_directory/ 21 -fasta -short solexa1.fa so lexa2.fa solexa3.fa -long[] Overfull \hbox (17.24684pt too wide) in paragraph at lines 241--241 []\OT1/cmtt/m/n/10 > velveth directory 21 -fastq other_reads.fastq -fasta selec ted_reads[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 248--248 []\OT1/cmtt/m/n/10 > myprogram | velveth directory 21 -fastq other_reads.fastq -fasta -[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 256--256 []\OT1/cmtt/m/n/10 > ./velveth output_directory/ 21 (...data files...) -strand_ specific[] [7] [8] Overfull \hbox (43.49661pt too wide) in paragraph at lines 341--341 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_coverage 300 (... other p arameters ...)[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 362--362 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -exp_cov 19 (... other paramet ers ...)[] [9] Overfull \hbox (22.4968pt too wide) in paragraph at lines 368--368 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -exp_cov auto (... other param eters ...)[] Overfull \hbox (22.4968pt too wide) in paragraph at lines 406--406 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -exp_cov auto (... other param eters ...)[] [10] [11] Overfull \hbox (32.9967pt too wide) in paragraph at lines 451--451 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -read_trkg yes (... other par ameters ...)[] Overfull \hbox (32.9967pt too wide) in paragraph at lines 459--459 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -amos_file yes (... other par ameters ...)[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 489--489 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -unused_reads yes (... other parameters ...)[] Overfull \hbox (5.18578pt too wide) in paragraph at lines 497--498 []$[]$\OT1/cmr/m/n/10 . If set [12] Overfull \hbox (59.24648pt too wide) in paragraph at lines 514--514 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_branch_length 200 (...oth er parameters...)[] Overfull \hbox (48.74657pt too wide) in paragraph at lines 522--522 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_divergence 0.33 (...other parameters...)[] Overfull \hbox (27.74675pt too wide) in paragraph at lines 530--530 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -max_gap_count 5 (...other par ameters...)[] [13] Overfull \hbox (38.24666pt too wide) in paragraph at lines 546--546 []\OT1/cmtt/m/n/10 > ./velvetg output_directory/ -min_pair_count 20 (...other p arameters...)[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 575--575 []\OT1/cmtt/m/n/10 > ./shuffleSequences_fasta.pl forward_reads.fa reverse_reads .fa output.fa[] [14] Overfull \hbox (8.06886pt too wide) in paragraph at lines 605--606 []\OT1/cmr/m/n/10 The cov-er-ages in columns \OT1/cmr/m/it/10 short1[]cov\OT1/c mr/m/n/10 , \OT1/cmr/m/it/10 short1[]Ocov\OT1/cmr/m/n/10 , \OT1/cmr/m/it/10 sho rt2[]cov\OT1/cmr/m/n/10 , and \OT1/cmr/m/it/10 short2[]Ocov [15] Overfull \hbox (73.7466pt too wide) in paragraph at lines 638--638 []\OT1/cmtt/m/n/10 NODE $NODE_ID $COV_SHORT1 $O_COV_SHORT1 $COV_SHORT 2 $O_COV_SHORT2[] Overfull \hbox (36.99692pt too wide) in paragraph at lines 656--656 []\OT1/cmtt/m/n/10 $NODE_ID $OFFSET_FROM_START $START_COORD $END_COORD $OFFSET _FROM_END[] [16] [17] [18 <./Suis_plot_1.pdf>] [19 <./suis_plot.pdf>] Overfull \hbox (16.9262pt too wide) in paragraph at lines 768--769 []\OT1/cmr/m/n/10 by Torsten See-man (torsten.seemann@infotech.monash.edu.au) [20] Overfull \hbox (47.5168pt too wide) in paragraph at lines 786--787 []\OT1/cmr/m/n/10 by Eric Cabot (ecabot@wisc.edu) Pe-ter (pe-ter@maubp.freeserv e.co.uk) [21] [22] (./Manual.aux) LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ) (see the transcript file for additional information) Output written on Manual.pdf (22 pages, 439210 bytes). Transcript written on Manual.log. This is pdfTeX, Version 3.141592653-2.6-1.40.28 (TeX Live 2025/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./Columbus_manual.tex LaTeX2e <2025-11-01> L3 programming layer <2026-01-19> (/usr/share/texlive/texmf-dist/tex/latex/base/article.cls Document Class: article 2025/01/22 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo)) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def) No file Columbus_manual.aux. Overfull \hbox (14.63878pt too wide) in paragraph at lines 36--37 []\OT1/cmr/m/n/12 You se-quenced an in-di-vid-ual genome by WGS, mapped [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] Overfull \hbox (5.12076pt too wide) in paragraph at lines 132--134 []\OT1/cmr/m/n/12 This scripts adds an ar-bi-trary buffer length (de-fault $100 \OML/cmm/m/it/12 bp$\OT1/cmr/m/n/12 ) Overfull \hbox (36.07521pt too wide) in paragraph at lines 145--145 []\OT1/cmtt/m/n/12 grep exon my_annotation.gtf | enlarge_exons.pl | merge_gtf_e xons.pl \[] Overfull \hbox (29.9002pt too wide) in paragraph at lines 145--145 [] \OT1/cmtt/m/n/12 | gff2fasta.pl my_reference_assembly.fa > my_reference_sequ ences.fa[] [5] (./Columbus_manual.aux) kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tcrm1200 mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tcrm1200 This is METAFONT, Version 2.71828182 (TeX Live 2025/Debian) (preloaded base=mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm1200.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tcrm.mf (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf Ok [100] [109] [98] [99] [108]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44] [45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95] [96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174] [175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf Ok [185] [178] [179] [170] [186]) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf Ok [188] [189] [190]) ) ) ) (some charht values had to be adjusted by as much as 0.06665pt) Font metrics written on tcrm1200.tfm. Output written on tcrm1200.600gf (128 characters, 28032 bytes). Transcript written on tcrm1200.log. mktexpk: /build/reproducible-path/velvet-1.2.10+dfsg1/debian/.debhelper/generated/_source/home/.texlive2025/texmf-var/fonts/pk/ljfour/jknappen/ec/tcrm1200.600pk: successfully generated. ) (see the transcript file for additional information) Output written on Columbus_manual.pdf (5 pages, 88477 bytes). Transcript written on Columbus_manual.log. make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' dh_auto_build -- color OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro" make -j1 INSTALL="install --strip-program=true" PKG_CONFIG=i686-linux-gnu-pkg-config CXX=i686-linux-gnu-g\+\+ CC=i686-linux-gnu-gcc color OPENMP=1 CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS=-Wl,-z,relro make[2]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make objdir make[3]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' mkdir -p obj make[3]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make obj/tightString.o obj/run.o obj/splay.o obj/splayTable.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/scaffold.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o make[3]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make[3]: 'obj/tightString.o' is up to date. make[3]: 'obj/run.o' is up to date. make[3]: 'obj/splay.o' is up to date. make[3]: 'obj/splayTable.o' is up to date. make[3]: 'obj/graph.o' is up to date. make[3]: 'obj/run2.o' is up to date. make[3]: 'obj/fibHeap.o' is up to date. make[3]: 'obj/fib.o' is up to date. make[3]: 'obj/concatenatedGraph.o' is up to date. make[3]: 'obj/passageMarker.o' is up to date. make[3]: 'obj/graphStats.o' is up to date. make[3]: 'obj/correctedGraph.o' is up to date. make[3]: 'obj/dfib.o' is up to date. make[3]: 'obj/dfibHeap.o' is up to date. make[3]: 'obj/recycleBin.o' is up to date. make[3]: 'obj/readSet.o' is up to date. make[3]: 'obj/binarySequences.o' is up to date. make[3]: 'obj/shortReadPairs.o' is up to date. make[3]: 'obj/locallyCorrectedGraph.o' is up to date. make[3]: 'obj/graphReConstruction.o' is up to date. make[3]: 'obj/roadMap.o' is up to date. make[3]: 'obj/preGraph.o' is up to date. make[3]: 'obj/preGraphConstruction.o' is up to date. make[3]: 'obj/concatenatedPreGraph.o' is up to date. make[3]: 'obj/readCoherentGraph.o' is up to date. make[3]: 'obj/utility.o' is up to date. make[3]: 'obj/kmer.o' is up to date. make[3]: 'obj/scaffold.o' is up to date. make[3]: 'obj/kmerOccurenceTable.o' is up to date. make[3]: 'obj/allocArray.o' is up to date. make[3]: 'obj/autoOpen.o' is up to date. make[3]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velveth_de obj/tightString.o obj/run.o obj/recycleBin.o obj/splay.o obj/splayTable.o obj/readSet.o obj/binarySequences.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm i686-linux-gnu-gcc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/velvet-1.2.10+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -O3 -Wl,-z,relro -o velvetg_de obj/tightString.o obj/graph.o obj/run2.o obj/fibHeap.o obj/fib.o obj/concatenatedGraph.o obj/passageMarker.o obj/graphStats.o obj/correctedGraph.o obj/dfib.o obj/dfibHeap.o obj/recycleBin.o obj/readSet.o obj/binarySequences.o obj/shortReadPairs.o obj/scaffold.o obj/locallyCorrectedGraph.o obj/graphReConstruction.o obj/roadMap.o obj/preGraph.o obj/preGraphConstruction.o obj/concatenatedPreGraph.o obj/readCoherentGraph.o obj/utility.o obj/kmer.o obj/kmerOccurenceTable.o obj/allocArray.o obj/autoOpen.o -lz -lm make[2]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' make[1]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install -a dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/velvet-1.2.10+dfsg1' dh_compress -X.pdf -X.c -X.pl -X.h -X.xz make[1]: Leaving directory '/build/reproducible-path/velvet-1.2.10+dfsg1' dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'velvet' in '../velvet_1.2.10+dfsg1-10_i386.deb'. dpkg-deb: building package 'velvet-dbgsym' in '../velvet-dbgsym_1.2.10+dfsg1-10_i386.deb'. dpkg-deb: building package 'velvet-long' in '../velvet-long_1.2.10+dfsg1-10_i386.deb'. dpkg-deb: building package 'velvet-long-dbgsym' in '../velvet-long-dbgsym_1.2.10+dfsg1-10_i386.deb'. dpkg-genbuildinfo --build=any -O../velvet_1.2.10+dfsg1-10_i386.buildinfo dpkg-genchanges --build=any -O../velvet_1.2.10+dfsg1-10_i386.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-04-06T18:39:05Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands Mon, 06 Apr 2026 18:39:05 +0000 | +------------------------------------------------------------------------------+ rm -Rf /build/reproducible-path/velvet-1.2.10+dfsg1/ ---------------------------------------------------- I: Finished running 'rm -Rf /build/reproducible-path/velvet-1.2.10+dfsg1/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 06 Apr 2026 18:39:06 +0000 | +------------------------------------------------------------------------------+ velvet_1.2.10+dfsg1-10_i386.changes: ------------------------------------ Format: 1.8 Date: Wed, 14 Jan 2026 22:17:14 +0100 Source: velvet Binary: velvet velvet-dbgsym velvet-long velvet-long-dbgsym Built-For-Profiles: cross nocheck Architecture: i386 Version: 1.2.10+dfsg1-10 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: velvet - Nucleic acid sequence assembler for very short reads velvet-long - Nucleic acid sequence assembler for very short reads, long versio Closes: 1105569 Changes: velvet (1.2.10+dfsg1-10) unstable; urgency=medium . * Team upload. * stabilize-makefile.patch: new: fix unordered build steps. (Closes: #1105569) * d/rules: allow parallel builds. * d/copyright: drop the old FSF mail address. * d/patches/*: normalise Last-Update timestamps. * d/watch: convert to v5 Github template. * d/control: drop redundant Priority: optional. * d/control: drop redundant Rules-Requires-Root: no. * d/control: declare compliance to standards version 4.7.3. * d/control: declare velvet-example Multi-Arch: foreign. 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velvet-long-dbgsym_1.2.10+dfsg1-10_i386.deb 8a59cfb8fcf3c77c3b2e86bae84263c2 184772 velvet-long_1.2.10+dfsg1-10_i386.deb 830c646287cab4f253f239e3b73a8c25 661688 velvet_1.2.10+dfsg1-10_i386.deb Checksums-Sha1: 15381cab86fea6ce9cd370231ede0d06bc8ecfbf 561432 velvet-dbgsym_1.2.10+dfsg1-10_i386.deb 7d5263190b18a867aa8f2c05f40f0a927766e321 480232 velvet-long-dbgsym_1.2.10+dfsg1-10_i386.deb e11f8fb5fee806ac679e3554a46c8ab5384d25db 184772 velvet-long_1.2.10+dfsg1-10_i386.deb 7234f3e602f54d7bbfaf28cd950708fa480bd284 661688 velvet_1.2.10+dfsg1-10_i386.deb Checksums-Sha256: 9e02b7fc46b688b4799a9ee8ea815bf4b62b6629272d3cf8dd81205333cd1d81 561432 velvet-dbgsym_1.2.10+dfsg1-10_i386.deb 368720f4d6f243e35b950c53650b72aaeaca94d936c0dd30dcb912841b2e3c3a 480232 velvet-long-dbgsym_1.2.10+dfsg1-10_i386.deb 2d6c6db843c8a3ea6508566076338b81e81a98696630607e926232b6a5c0437e 184772 velvet-long_1.2.10+dfsg1-10_i386.deb 08a7f16d584af3ad8d1334426e3a2bc3ccf45b6b0b4db6c21a88a388b11f78de 661688 velvet_1.2.10+dfsg1-10_i386.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Mon, 06 Apr 2026 18:39:04 +0000 Build-Path: /build/reproducible-path/velvet-1.2.10+dfsg1 Installed-Build-Depends: autoconf (= 2.72-6), automake (= 1:1.18.1-4), autopoint (= 0.23.2-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8+b1), bash (= 5.3-2), binutils (= 2.46-3), binutils-aarch64-linux-gnu (= 2.46-3), binutils-common (= 2.46-3), bsdextrautils (= 2.42-1), build-essential (= 12.12), bzip2 (= 1.0.8-6+b1), coreutils (= 9.10-1), cpp (= 4:15.2.0-5), cpp-15 (= 15.2.0-16), cpp-15-aarch64-linux-gnu (= 15.2.0-16), cpp-aarch64-linux-gnu (= 4:15.2.0-5), dash (= 0.5.12-12+b1), debconf (= 1.5.92), debhelper (= 13.31), debianutils (= 5.23.2+b1), dh-autoreconf (= 22), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1+b1), dpkg (= 1.23.7), dpkg-dev (= 1.23.7), dwz (= 0.16-4), file (= 1:5.46-5+b1), findutils (= 4.10.0-3+b1), fontconfig-config (= 2.17.1-5), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), g++ (= 4:15.2.0-5), g++-15 (= 15.2.0-16), g++-15-aarch64-linux-gnu (= 15.2.0-16), g++-aarch64-linux-gnu (= 4:15.2.0-5), gcc (= 4:15.2.0-5), gcc-15 (= 15.2.0-16), gcc-15-aarch64-linux-gnu (= 15.2.0-16), gcc-15-base (= 15.2.0-16), gcc-16-base (= 16-20260322-1), gcc-aarch64-linux-gnu (= 4:15.2.0-5), gettext (= 0.23.2-2), gettext-base (= 0.23.2-2), grep (= 3.12-1+b1), groff-base (= 1.23.0-10+b1), gzip (= 1.13-1+b1), hostname (= 3.25+b1), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-3), libarchive-zip-perl (= 1.68-1), libasan8 (= 16-20260322-1), libatomic1 (= 16-20260322-1), libattr1 (= 1:2.5.2-4), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.46-3), libblkid1 (= 2.42-1), libbrotli1 (= 1.2.0-3), libbz2-1.0 (= 1.0.8-6+b1), libc-bin (= 2.42-14), libc-dev-bin (= 2.42-14), libc-gconv-modules-extra (= 2.42-14), libc6 (= 2.42-14), libc6-dev (= 2.42-14), libcairo2 (= 1.18.4-3), libcap-ng0 (= 0.9.2-1), libcc1-0 (= 16-20260322-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.46-3), libctf0 (= 2.46-3), libdb5.3t64 (= 5.3.28+dfsg2-11), libdebconfclient0 (= 0.282+b2), libdebhelper-perl (= 13.31), libdpkg-perl (= 1.23.7), libelf1t64 (= 0.194-4), libexpat1 (= 2.7.5-1), libffi8 (= 3.5.2-4), libfile-stripnondeterminism-perl (= 1.15.0-1), libfontconfig1 (= 2.17.1-5), libfreetype6 (= 2.14.3+dfsg-1), libgcc-15-dev (= 15.2.0-16), libgcc-s1 (= 16-20260322-1), libgdbm-compat4t64 (= 1.26-1+b1), libgdbm6t64 (= 1.26-1+b1), libglib2.0-0t64 (= 2.88.0-1), libgmp10 (= 2:6.3.0+dfsg-5+b1), libgomp1 (= 16-20260322-1), libgprofng0 (= 2.46-3), libgraphite2-3 (= 1.3.14-13), libharfbuzz0b (= 12.3.2-2+b2), libhwasan0 (= 16-20260322-1), libice6 (= 2:1.1.1-1+b1), libicu78 (= 78.3-1), libisl23 (= 0.27-2), libitm1 (= 16-20260322-1), libjansson4 (= 2.14-2+b4), libkpathsea6 (= 2025.20250727.75242+ds-5+b2), liblsan0 (= 16-20260322-1), liblzma5 (= 5.8.2-2), libmagic-mgc (= 1:5.46-5+b1), libmagic1t64 (= 1:5.46-5+b1), libmd0 (= 1.1.0-2+b2), libmount1 (= 2.42-1), libmpc3 (= 1.3.1-3), libmpfi0 (= 1.5.4+ds-5), libmpfr6 (= 4.2.2-3), libncursesw6 (= 6.6+20251231-1), libpam-modules (= 1.7.0-5+b1), libpam-modules-bin (= 1.7.0-5+b1), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5+b1), libpaper-utils (= 2.2.5-0.3+b3), libpaper2 (= 2.2.5-0.3+b3), libpcre2-8-0 (= 10.46-1+b1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libpixman-1-0 (= 0.46.4-1+b1), libpng16-16t64 (= 1.6.56-1), libpotrace0 (= 1.16-2+b3), libproc2-0 (= 2:4.0.4-9+b1), libptexenc1 (= 2025.20250727.75242+ds-5+b2), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.10-1), libsframe3 (= 2.46-3), libsm6 (= 2:1.2.6-1+b1), libsmartcols1 (= 2.42-1), libssl3t64 (= 3.6.1-3), libstdc++-15-dev (= 15.2.0-16), libstdc++6 (= 16-20260322-1), libsynctex2 (= 2025.20250727.75242+ds-5+b2), libsystemd0 (= 260.1-1), libteckit0 (= 2.5.13+ds-1), libtexlua53-5 (= 2025.20250727.75242+ds-5+b2), libtext-charwidth-perl (= 0.04-11+b5), libtext-wrapi18n-perl (= 0.06-10), libtinfo6 (= 6.6+20251231-1), libtool (= 2.5.4-10), libtsan2 (= 16-20260322-1), libubsan1 (= 16-20260322-1), libuchardet0 (= 0.0.8-2+b1), libudev1 (= 260.1-1), libunistring5 (= 1.4.2-1), libuuid1 (= 2.42-1), libx11-6 (= 2:1.8.13-1), libx11-data (= 2:1.8.13-1), libxau6 (= 1:1.0.11-1+b1), libxaw7 (= 2:1.0.16-1+b1), libxcb-render0 (= 1.17.0-2+b2), libxcb-shm0 (= 1.17.0-2+b2), libxcb1 (= 1.17.0-2+b2), libxdmcp6 (= 1:1.1.5-2), libxext6 (= 2:1.3.4-1+b4), libxi6 (= 2:1.8.2-2), libxml2-16 (= 2.15.2+dfsg-0.1), libxmu6 (= 2:1.1.3-4), libxpm4 (= 1:3.5.17-1+b4), libxrender1 (= 1:0.9.12-1+b1), libxt6t64 (= 1:1.2.1-1.3+b1), libzstd1 (= 1.5.7+dfsg-3+b1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.2), linux-libc-dev (= 6.19.11-1), m4 (= 1.4.21-1), make (= 4.4.1-3+b1), man-db (= 2.13.1-1+b1), mawk (= 1.3.4.20260302-1), ncurses-base (= 6.6+20251231-1), ncurses-bin (= 6.6+20251231-1), openssl-provider-legacy (= 3.6.1-3), patch (= 2.8-2+b1), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), po-debconf (= 1.0.22), procps (= 2:4.0.4-9+b1), rpcsvc-proto (= 1.4.3-1+b2), sed (= 4.9-2+b2), sensible-utils (= 0.0.26), sysvinit-utils (= 3.18-1), t1utils (= 1.41-4+b2), tar (= 1.35+dfsg-4), tex-common (= 6.20), texlive-base (= 2025.20260124-1), texlive-binaries (= 2025.20250727.75242+ds-5+b2), texlive-latex-base (= 2025.20260124-1), texlive-latex-recommended (= 2025.20260124-1), ucf (= 3.0053), util-linux (= 2.42-1), x11-common (= 1:7.7+26), xdg-utils (= 1.2.1-2), xz-utils (= 5.8.2-2), zlib1g (= 1:1.3.dfsg+really1.3.2-3), zlib1g-dev (= 1:1.3.dfsg+really1.3.2-3) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1768425434" +------------------------------------------------------------------------------+ | Package contents Mon, 06 Apr 2026 18:39:08 +0000 | +------------------------------------------------------------------------------+ velvet-dbgsym_1.2.10+dfsg1-10_i386.deb -------------------------------------- new Debian package, version 2.0. size 561432 bytes: control archive=700 bytes. 463 bytes, 12 lines control 399 bytes, 4 lines md5sums Package: velvet-dbgsym Source: velvet Version: 1.2.10+dfsg1-10 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 778 Depends: velvet (= 1.2.10+dfsg1-10) Section: debug Priority: optional Description: debug symbols for velvet Build-Ids: 23808f38b65936d9ef0309960f93184a6b65523c 8730dc10f97c103d7400a102d0e021f859a6c0ac dd3a9a1f8848763db94a98f6cd3cf87b9f9bce75 drwxr-xr-x root/root 0 2026-01-14 21:17 ./ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.build-id/23/ -rw-r--r-- root/root 130616 2026-01-14 21:17 ./usr/lib/debug/.build-id/23/808f38b65936d9ef0309960f93184a6b65523c.debug drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.build-id/87/ -rw-r--r-- root/root 472948 2026-01-14 21:17 ./usr/lib/debug/.build-id/87/30dc10f97c103d7400a102d0e021f859a6c0ac.debug drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.build-id/dd/ -rw-r--r-- root/root 134116 2026-01-14 21:17 ./usr/lib/debug/.build-id/dd/3a9a1f8848763db94a98f6cd3cf87b9f9bce75.debug drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.dwz/i386-linux-gnu/ -rw-r--r-- root/root 43028 2026-01-14 21:17 ./usr/lib/debug/.dwz/i386-linux-gnu/velvet.debug drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-01-14 21:17 ./usr/share/doc/velvet-dbgsym -> velvet velvet-long-dbgsym_1.2.10+dfsg1-10_i386.deb ------------------------------------------- new Debian package, version 2.0. size 480232 bytes: control archive=648 bytes. 437 bytes, 12 lines control 298 bytes, 3 lines md5sums Package: velvet-long-dbgsym Source: velvet Version: 1.2.10+dfsg1-10 Auto-Built-Package: debug-symbols Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 646 Depends: velvet-long (= 1.2.10+dfsg1-10) Section: debug Priority: optional Description: debug symbols for velvet-long Build-Ids: 23808f38b65936d9ef0309960f93184a6b65523c 8730dc10f97c103d7400a102d0e021f859a6c0ac drwxr-xr-x root/root 0 2026-01-14 21:17 ./ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.build-id/23/ -rw-r--r-- root/root 130552 2026-01-14 21:17 ./usr/lib/debug/.build-id/23/808f38b65936d9ef0309960f93184a6b65523c.debug drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.build-id/87/ -rw-r--r-- root/root 472884 2026-01-14 21:17 ./usr/lib/debug/.build-id/87/30dc10f97c103d7400a102d0e021f859a6c0ac.debug drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/lib/debug/.dwz/i386-linux-gnu/ -rw-r--r-- root/root 43416 2026-01-14 21:17 ./usr/lib/debug/.dwz/i386-linux-gnu/velvet-long.debug drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/doc/ lrwxrwxrwx root/root 0 2026-01-14 21:17 ./usr/share/doc/velvet-long-dbgsym -> velvet-long velvet-long_1.2.10+dfsg1-10_i386.deb ------------------------------------ new Debian package, version 2.0. size 184772 bytes: control archive=1304 bytes. 999 bytes, 22 lines control 1499 bytes, 23 lines md5sums Package: velvet-long Source: velvet Version: 1.2.10+dfsg1-10 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 2345 Depends: libc6 (>= 2.38), libgomp1 (>= 4.9), zlib1g (>= 1:1.2.0.2), velvet Section: science Priority: optional Homepage: https://github.com/dzerbino/velvet Description: Nucleic acid sequence assembler for very short reads, long version Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom. . Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs. . This package installs special long-mode versions of Velvet, as recommended in the Velvet tutorials. drwxr-xr-x root/root 0 2026-01-14 21:17 ./ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/bin/ -rwxr-xr-x root/root 358464 2026-01-14 21:17 ./usr/bin/velvetg_127 -rwxr-xr-x root/root 358464 2026-01-14 21:17 ./usr/bin/velvetg_127_long -rwxr-xr-x root/root 358464 2026-01-14 21:17 ./usr/bin/velvetg_63 -rwxr-xr-x root/root 358464 2026-01-14 21:17 ./usr/bin/velvetg_63_long -rwxr-xr-x root/root 358464 2026-01-14 21:17 ./usr/bin/velvetg_long -rwxr-xr-x root/root 112632 2026-01-14 21:17 ./usr/bin/velveth_127 -rwxr-xr-x root/root 112632 2026-01-14 21:17 ./usr/bin/velveth_127_long -rwxr-xr-x root/root 112632 2026-01-14 21:17 ./usr/bin/velveth_63 -rwxr-xr-x root/root 112632 2026-01-14 21:17 ./usr/bin/velveth_63_long -rwxr-xr-x root/root 112632 2026-01-14 21:17 ./usr/bin/velveth_long drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/doc/velvet-long/ -rw-r--r-- root/root 941 2026-01-14 21:17 ./usr/share/doc/velvet-long/changelog.Debian.gz -rw-r--r-- root/root 4572 2013-06-06 20:00 ./usr/share/doc/velvet-long/changelog.gz -rw-r--r-- root/root 4376 2026-01-14 21:17 ./usr/share/doc/velvet-long/copyright drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/man/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/man/man1/ -rw-r--r-- root/root 1488 2026-01-14 21:17 ./usr/share/man/man1/velvetg_127.1.gz -rw-r--r-- root/root 1508 2026-01-14 21:17 ./usr/share/man/man1/velvetg_127_long.1.gz -rw-r--r-- root/root 1487 2026-01-14 21:17 ./usr/share/man/man1/velvetg_63.1.gz -rw-r--r-- root/root 1507 2026-01-14 21:17 ./usr/share/man/man1/velvetg_63_long.1.gz -rw-r--r-- root/root 1483 2026-01-14 21:17 ./usr/share/man/man1/velvetg_long.1.gz -rw-r--r-- root/root 1442 2026-01-14 21:17 ./usr/share/man/man1/velveth_127.1.gz -rw-r--r-- root/root 1463 2026-01-14 21:17 ./usr/share/man/man1/velveth_127_long.1.gz -rw-r--r-- root/root 1441 2026-01-14 21:17 ./usr/share/man/man1/velveth_63.1.gz -rw-r--r-- root/root 1462 2026-01-14 21:17 ./usr/share/man/man1/velveth_63_long.1.gz -rw-r--r-- root/root 1454 2026-01-14 21:17 ./usr/share/man/man1/velveth_long.1.gz velvet_1.2.10+dfsg1-10_i386.deb ------------------------------- new Debian package, version 2.0. size 661688 bytes: control archive=1308 bytes. 877 bytes, 19 lines control 1161 bytes, 18 lines md5sums Package: velvet Version: 1.2.10+dfsg1-10 Architecture: i386 Maintainer: Debian Med Packaging Team Installed-Size: 1474 Depends: libc6 (>= 2.38), libgomp1 (>= 4.9), zlib1g (>= 1:1.2.0.2) Suggests: velvet-example Section: science Priority: optional Homepage: https://github.com/dzerbino/velvet Description: Nucleic acid sequence assembler for very short reads Velvet is a de novo genomic assembler specially designed for short read sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI), near Cambridge, in the United Kingdom. . Velvet currently takes in short read sequences, removes errors then produces high quality unique contigs. It then uses paired read information, if available, to retrieve the repeated areas between contigs. drwxr-xr-x root/root 0 2026-01-14 21:17 ./ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/bin/ -rwxr-xr-x root/root 358456 2026-01-14 21:17 ./usr/bin/velvetg -rwxr-xr-x root/root 358456 2026-01-14 21:17 ./usr/bin/velvetg_de -rwxr-xr-x root/root 112624 2026-01-14 21:17 ./usr/bin/velveth -rwxr-xr-x root/root 112624 2026-01-14 21:17 ./usr/bin/velveth_de drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/doc-base/ -rw-r--r-- root/root 243 2026-01-14 21:17 ./usr/share/doc-base/velvet.velvet drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/doc/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/doc/velvet/ -rw-r--r-- root/root 1956 2013-06-06 20:00 ./usr/share/doc/velvet/CREDITS.txt -rw-r--r-- root/root 88477 2026-01-14 21:17 ./usr/share/doc/velvet/Columbus_manual.pdf -rw-r--r-- root/root 439210 2026-01-14 21:17 ./usr/share/doc/velvet/Manual.pdf -rw-r--r-- root/root 220 2026-01-14 21:17 ./usr/share/doc/velvet/README.Debian -rw-r--r-- root/root 405 2026-01-14 21:17 ./usr/share/doc/velvet/README.test -rw-r--r-- root/root 1117 2013-06-06 20:00 ./usr/share/doc/velvet/README.txt -rw-r--r-- root/root 938 2026-01-14 21:17 ./usr/share/doc/velvet/changelog.Debian.gz -rw-r--r-- root/root 4572 2013-06-06 20:00 ./usr/share/doc/velvet/changelog.gz -rw-r--r-- root/root 4376 2026-01-14 21:17 ./usr/share/doc/velvet/copyright drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/man/ drwxr-xr-x root/root 0 2026-01-14 21:17 ./usr/share/man/man1/ -rw-r--r-- root/root 1460 2026-01-14 21:17 ./usr/share/man/man1/velvetg.1.gz -rw-r--r-- root/root 1479 2026-01-14 21:17 ./usr/share/man/man1/velvetg_de.1.gz -rw-r--r-- root/root 1422 2026-01-14 21:17 ./usr/share/man/man1/velveth.1.gz -rw-r--r-- root/root 1453 2026-01-14 21:17 ./usr/share/man/man1/velveth_de.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/build/reproducible-path/resolver-QDIi7x/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ InRelease Get:2 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Release [615 B] Ign:3 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Release.gpg Get:4 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Sources [1353 B] Get:5 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ Packages [1430 B] Fetched 3398 B in 0s (134 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-libmagic-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libfyaml0 libgcrypt20 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common shared-mime-info unzip Suggested packages: apt-config-icons isoquery libxml-parser-perl rng-tools gnutls-bin krb5-doc krb5-user libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libmime-base32-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl python3 readline-doc zip Recommended packages: gnupg libcgi-fast-perl libgpg-error-l10n libhtml-format-perl libio-compress-brotli-perl krb5-locales libldap-common liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl publicsuffix libsasl2-modules libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl libxml-sax-expat-perl The following NEW packages will be installed: appstream ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libappstream5 libapt-pkg-perl libassuan9 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-inspector-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libcom-err2 libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libcurl3t64-gnutls libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-libmagic-perl libfile-listing-perl libfile-sharedir-perl libfont-ttf-perl libfyaml0 libgcrypt20 libgnutls30t64 libgpg-error0 libgssapi-krb5-2 libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libidn2-0 libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libio-string-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 libksba8 libldap2 liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnghttp2-14 libnghttp3-9 libngtcp2-16 libngtcp2-crypto-gnutls8 libnpth0t64 libnumber-compare-perl libp11-kit0 libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libpsl5t64 libreadline8t64 libregexp-wildcards-perl librole-tiny-perl librtmp1 libsasl2-2 libsasl2-modules-db libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libssh2-1t64 libstemmer0d libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libtasn1-6 libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxmlb2 libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:i386 shared-mime-info unzip 0 upgraded, 167 newly installed, 0 to remove and 0 not upgraded. Need to get 20.5 MB of archives. After this operation, 86.4 MB of additional disk space will be used. Get:1 copy:/build/reproducible-path/resolver-QDIi7x/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [836 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.3-4 [74.8 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.6.1-3 [1475 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20260223 [158 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b4 [754 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libnghttp3-9 arm64 1.15.0-1 [61.9 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-16 arm64 1.21.0-1 [122 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4+b1 [108 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libp11-kit0 arm64 0.26.2-2 [436 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libtasn1-6 arm64 4.21.0-2 [48.0 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 libgnutls30t64 arm64 3.8.12-3 [1409 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libkrb5support0 arm64 1.22.1-2 [32.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libcom-err2 arm64 1.47.4-1 [19.2 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libk5crypto3 arm64 1.22.1-2 [77.1 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6+b1 [9852 B] Get:17 http://mirror.einval.org/debian unstable/main arm64 libkrb5-3 arm64 1.22.1-2 [315 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libgssapi-krb5-2 arm64 1.22.1-2 [127 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-11 [17.1 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-11 [52.4 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1+b1 [179 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libnghttp2-14 arm64 1.68.1-1 [68.1 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.21.0-1 [22.2 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.5-1 [59.7 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3+b1 [57.7 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-2 [234 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libcurl3t64-gnutls arm64 8.19.0-3 [362 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libfyaml0 arm64 0.9.4-1 [245 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libstemmer0d arm64 3.0.1-1+b1 [123 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libxmlb2 arm64 0.3.24-2 [58.5 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libappstream5 arm64 1.1.2-1 [210 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 appstream arm64 1.1.2-1 [564 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.68-1+b1 [33.1 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libgpg-error0 arm64 1.59-4 [83.4 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libassuan9 arm64 3.0.2-2+b1 [59.0 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libgcrypt20 arm64 1.12.1-2 [787 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-4 [168 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.4.9-4 [117 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libksba8 arm64 1.6.8-2 [124 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libnpth0t64 arm64 1.8-3+b1 [23.1 kB] Get:41 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.1-9+b1 [851 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.4.9-4 [570 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.20.1-1 [3319 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.43 [64.6 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b3 [10.6 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.004-2 [12.2 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-3 [15.5 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b5 [22.3 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.018-1 [17.8 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:54 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.64-1+b2 [43.9 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-2 [17.6 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.66-2 [116 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.50-1 [24.6 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.34-2 [111 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.83-1+b3 [97.2 kB] Get:61 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.71-1 [217 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.10-1 [8632 B] Get:63 http://mirror.einval.org/debian unstable/main arm64 libclass-inspector-perl all 1.36-3 [17.5 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b6 [35.1 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.50-1 [20.6 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3+b2 [23.9 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:73 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.40-1 [129 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:76 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.60-1 [41.8 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-3+b1 [31.5 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-4 [31.5 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.15-1 [11.9 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0003-1 [28.5 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b6 [97.8 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.87-1 [23.7 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b5 [28.2 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libnumber-compare-perl all 0.03-3 [6332 B] Get:93 http://mirror.einval.org/debian unstable/main arm64 libtext-glob-perl all 0.11-3 [7676 B] Get:94 http://mirror.einval.org/debian unstable/main arm64 libfile-find-rule-perl all 0.35-1 [25.9 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libfile-libmagic-perl arm64 1.23-2+b3 [31.1 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3500-1 [64.2 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:99 http://mirror.einval.org/debian unstable/main arm64 libfile-sharedir-perl all 1.118-3 [16.0 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get:101 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 7.01-1 [80.0 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.13-1 [32.6 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:109 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get:111 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.96-1 [328 kB] Get:112 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.098-1 [229 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.24-1 [23.2 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.15-1 [10.7 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:116 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.82-1 [184 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.027-1 [11.8 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004008-1 [12.9 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.16-1 [38.0 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3+b2 [50.7 kB] Get:127 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2.1+b1 [33.8 kB] Get:128 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:129 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:130 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006009-1 [21.3 kB] Get:131 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:132 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:133 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-3 [6996 B] Get:134 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.6.2-1 [140 kB] Get:135 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:136 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-4 [10.9 kB] Get:137 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.28-1+b1 [12.4 kB] Get:138 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:139 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.150-1 [56.4 kB] Get:140 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b5 [17.4 kB] Get:141 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1+b4 [11.4 kB] Get:142 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.637-1+b1 [41.6 kB] Get:143 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:144 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.004+ds-1+b4 [97.1 kB] Get:145 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.004+ds-1+b4 [99.6 kB] Get:146 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:147 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.49-1 [64.3 kB] Get:148 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.31-1 [27.2 kB] Get:149 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b5 [24.5 kB] Get:150 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b5 [8792 B] Get:151 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.18-1+b1 [13.5 kB] Get:152 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-2+b2 [171 kB] Get:153 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:154 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.46-1 [77.1 kB] Get:155 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.70-2 [20.1 kB] Get:156 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.20-1 [117 kB] Get:157 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:158 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:159 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Get:160 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-7 [300 kB] Get:161 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-2+b1 [47.8 kB] Get:162 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.904.0+ds-1 [43.6 kB] Get:163 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.13-1 [60.6 kB] Get:164 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2+b2 [82.0 kB] Get:165 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.5-1 [81.0 kB] Get:166 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-29+b1 [163 kB] Get:167 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.133.0 [1029 kB] Preconfiguring packages ... Fetched 20.5 MB in 0s (58.8 MB/s) Selecting previously unselected package netbase. (Reading database ... 27328 files and directories currently installed.) Preparing to unpack .../000-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.3-4_all.deb ... Unpacking readline-common (8.3-4) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.6.1-3_arm64.deb ... Unpacking openssl (3.6.1-3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20260223_all.deb ... Unpacking ca-certificates (20260223) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../004-shared-mime-info_2.4-5+b4_arm64.deb ... Unpacking shared-mime-info (2.4-5+b4) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../005-libnghttp3-9_1.15.0-1_arm64.deb ... 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Setting up liblz1:arm64 (1.16-1) ... Setting up libberkeleydb-perl:arm64 (0.66-2) ... Setting up plzip (1.13-1) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libnpth0t64:arm64 (1.8-3+b1) ... Setting up libkeyutils1:arm64 (1.6.3-6+b1) ... Setting up libunicode-utf8-perl (0.70-2) ... Setting up libmouse-perl:arm64 (2.6.2-1) ... Setting up libgpg-error0:arm64 (1.59-4) ... Setting up libdata-messagepack-perl (1.02-3+b1) ... Setting up libclass-inspector-perl (1.36-3) ... Setting up libdynaloader-functions-perl (0.004-2) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:arm64 (0.50-1) ... Setting up libyaml-0-2:arm64 (0.2.5-2+b1) ... Setting up libsub-identify-perl (0.14-4) ... Setting up libcpanel-json-xs-perl:arm64 (4.40-1) ... Setting up libhtml-tagset-perl (3.24-1) ... Setting up libxmlb2:arm64 (0.3.24-2) ... Setting up libdevel-size-perl (0.87-1) ... Setting up unzip (6.0-29+b1) ... Setting up libsqlite3-0:arm64 (3.46.1-9+b1) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.904.0+ds-1) ... Setting up libio-interactive-perl (1.027-1) ... Setting up libtry-tiny-perl (0.32-1) ... Setting up libnghttp2-14:arm64 (1.68.1-1) ... Setting up perl-openssl-defaults:arm64 (7+b2) ... Setting up libmldbm-perl (2.05-4) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up libgcrypt20:arm64 (1.12.1-2) ... Setting up liblzo2-2:arm64 (2.10-3+b2) ... Setting up libtime-moment-perl (0.46-1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libidn2-0:arm64 (2.3.8-4+b1) ... Setting up libcom-err2:arm64 (1.47.4-1) ... Setting up libconfig-tiny-perl (2.30-1) ... Setting up libsereal-encoder-perl (5.004+ds-1+b4) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0003-1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libfyaml0:arm64 (0.9.4-1) ... Setting up libkrb5support0:arm64 (1.22.1-2) ... Setting up libnumber-compare-perl (0.03-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-11) ... Setting up patchutils (0.4.5-1) ... Setting up libjson-maybexs-perl (1.004008-1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b6) ... Setting up libclass-data-inheritable-perl (0.10-1) ... Setting up libfile-find-rule-perl (0.35-1) ... Setting up libipc-system-simple-perl (1.30-2) ... Setting up libnet-domain-tld-perl (1.75-4) ... Setting up libperlio-utf8-strict-perl (0.010-1+b4) ... Setting up shared-mime-info (2.4-5+b4) ... Setting up libp11-kit0:arm64 (0.26.2-2) ... Setting up diffstat (1.68-1+b1) ... Setting up libvariable-magic-perl (0.64-1+b2) ... Setting up libio-html-perl (1.004-3) ... Setting up libb-hooks-op-check-perl:arm64 (0.22-3+b3) ... Setting up libfile-libmagic-perl (1.23-2+b3) ... Setting up libk5crypto3:arm64 (1.22.1-2) ... Setting up libparams-util-perl (1.102-3+b2) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-11) ... Setting up libtime-duration-perl (1.21-2) ... Setting up libtext-xslate-perl:arm64 (3.5.9-2+b2) ... Setting up libnghttp3-9:arm64 (1.15.0-1) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libcapture-tiny-perl (0.50-1) ... Setting up libtimedate-perl (2.3500-1) ... Setting up libsub-name-perl:arm64 (0.28-1+b1) ... Setting up libdata-validate-domain-perl (0.15-1) ... Setting up libproc-processtable-perl:arm64 (0.637-1+b1) ... Setting up libpath-tiny-perl (0.150-1) ... Setting up lzop (1.04-2+b2) ... Setting up libassuan9:arm64 (3.0.2-2+b1) ... 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Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b4) ... Setting up libmarkdown2:arm64 (2.2.7-2.1+b1) ... Setting up libldap2:arm64 (2.6.10+dfsg-1+b1) ... Setting up liburi-perl (5.34-2) ... Setting up iso-codes (4.20.1-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b5) ... Setting up libnet-ssleay-perl:arm64 (1.96-1) ... Setting up libgnutls30t64:arm64 (3.8.12-3) ... Setting up libksba8:arm64 (1.6.8-2) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libpsl5t64:arm64 (0.21.5-1) ... Setting up libnet-http-perl (6.24-1) ... Setting up libtext-markdown-discount-perl (0.18-1+b1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.009-3) ... Setting up libxml-sax-perl (1.02+dfsg-4) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up ca-certificates (20260223) ... Updating certificates in /etc/ssl/certs... 144 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libxs-parse-keyword-perl (0.49-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3+b1) ... Setting up libgssapi-krb5-2:arm64 (1.22.1-2) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libreadline8t64:arm64 (8.3-4) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-7) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libsyntax-keyword-try-perl (0.31-1) ... Setting up libhtml-parser-perl:arm64 (3.83-1+b3) ... Setting up gpgconf (2.4.9-4) ... Setting up libio-socket-ssl-perl (2.098-1) ... Setting up gpg (2.4.9-4) ... Setting up libngtcp2-crypto-gnutls8:arm64 (1.21.0-1) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (7.01-1) ... Setting up libhtml-form-perl (6.13-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:arm64 (0.015-2+b5) ... Setting up libcgi-pm-perl (4.71-1) ... Setting up libcurl3t64-gnutls:arm64 (8.19.0-3) ... Setting up libappstream5:arm64 (1.1.2-1) ... Setting up appstream (1.1.2-1) ... ✔ Metadata cache was updated successfully. Setting up libmodule-runtime-perl (0.018-1) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.60-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-3) ... Setting up libb-hooks-endofscope-perl (0.28-2) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up liblwp-protocol-https-perl (6.15-1) ... Setting up libwww-perl (6.82-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.20-1) ... Setting up lintian (2.133.0) ... Setting up sbuild-build-depends-lintian-dummy:i386 (0.invalid.0) ... Processing triggers for libc-bin (2.42-14) ... Processing triggers for man-db (2.13.1-1+b1) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20260223) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build Mon, 06 Apr 2026 18:40:17 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Mon, 06 Apr 2026 18:40:17 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Mon, 06 Apr 2026 18:40:21 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 78 Distribution: unstable Foreign Architectures: i386 Host Architecture: i386 Install-Time: 195 Job: velvet_1.2.10+dfsg1-10 Lintian: pass Machine Architecture: arm64 Package: velvet Package-Time: 318 Source-Version: 1.2.10+dfsg1-10 Space: n/a Status: successful Version: 1.2.10+dfsg1-10 -------------------------------------------------------------------------------- Finished at 2026-04-06T18:39:05Z Build needed 00:05:18, no disk space