sbuild (Debian sbuild) 0.85.0 (04 January 2023) on debian-ci-siliconvalley +==============================================================================+ | vg 1.59.0+ds-0.1 (riscv64) Sun, 24 Nov 2024 21:07:15 +0000 | +==============================================================================+ Package: vg Version: 1.59.0+ds-0.1 Source Version: 1.59.0+ds-0.1 Distribution: unstable Machine Architecture: amd64 Host Architecture: riscv64 Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-0c6fbf3a-a04b-490b-8c95-6d345792cf3d' with '<>' I: NOTICE: Log filtering will replace 'build/vg-Xy8qiP/resolver-lquByI' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian unstable InRelease [202 kB] Get:2 http://localhost:3142/debian unstable/non-free-firmware Sources [6824 B] Get:3 http://localhost:3142/debian unstable/main Sources [10.9 MB] Get:4 http://localhost:3142/debian unstable/contrib Sources [62.6 kB] Get:5 http://localhost:3142/debian unstable/non-free Sources [83.5 kB] Get:6 http://localhost:3142/debian unstable/main amd64 Packages [10.0 MB] Get:7 http://localhost:3142/debian unstable/main riscv64 Packages [9664 kB] Fetched 31.0 MB in 3s (11.0 MB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: apt base-files base-passwd bash bsdutils coreutils cpp-14 cpp-14-x86-64-linux-gnu debianutils e2fsprogs g++-14 g++-14-x86-64-linux-gnu gcc-14 gcc-14-base gcc-14-x86-64-linux-gnu gpgv libacl1 libapt-pkg6.0t64 libasan8 libatomic1 libaudit-common libaudit1 libblkid1 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libdebconfclient0 libext2fs2t64 libgcc-14-dev libgcc-s1 libgmp10 libgnutls30t64 libgomp1 libhogweed6t64 libhwasan0 libidn2-0 libitm1 libjansson4 liblsan0 liblz4-1 liblzma5 libmd0 libmount1 libmpc3 libmpfr6 libnettle8t64 libp11-kit0 libpam-modules libpam-modules-bin libpam0g libpcre2-8-0 libperl5.40 libquadmath0 libseccomp2 libselinux1 libsemanage2 libsmartcols1 libss2 libssl3t64 libstdc++-14-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan2 libubsan1 libudev1 libunistring5 libuuid1 libxxhash0 libzstd1 linux-libc-dev login login.defs logsave mount ncurses-bin openssl-provider-legacy passwd perl perl-base perl-modules-5.40 sysvinit-utils util-linux xz-utils zlib1g 91 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 100 MB of archives. After this operation, 70.7 kB disk space will be freed. 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http://localhost:3142/debian unstable/main amd64 libtsan2 amd64 14.2.0-8 [2461 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libubsan1 amd64 14.2.0-8 [1075 kB] Get:14 http://localhost:3142/debian unstable/main amd64 libhwasan0 amd64 14.2.0-8 [1489 kB] Get:15 http://localhost:3142/debian unstable/main amd64 libquadmath0 amd64 14.2.0-8 [145 kB] Get:16 http://localhost:3142/debian unstable/main amd64 gcc-14 amd64 14.2.0-8 [530 kB] Get:17 http://localhost:3142/debian unstable/main amd64 g++-14 amd64 14.2.0-8 [20.2 kB] Get:18 http://localhost:3142/debian unstable/main amd64 g++-14-x86-64-linux-gnu amd64 14.2.0-8 [12.1 MB] Get:19 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev amd64 14.2.0-8 [2369 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev amd64 14.2.0-8 [2674 kB] Get:21 http://localhost:3142/debian unstable/main amd64 gcc-14-x86-64-linux-gnu amd64 14.2.0-8 [21.4 MB] Get:22 http://localhost:3142/debian unstable/main amd64 cpp-14-x86-64-linux-gnu amd64 14.2.0-8 [11.1 MB] Get:23 http://localhost:3142/debian unstable/main amd64 cpp-14 amd64 14.2.0-8 [1276 B] Get:24 http://localhost:3142/debian unstable/main amd64 libstdc++6 amd64 14.2.0-8 [714 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libgmp10 amd64 2:6.3.0+dfsg-2+b2 [560 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libmpfr6 amd64 4.2.1-1+b2 [724 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libmpc3 amd64 1.3.1-1+b3 [52.2 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libzstd1 amd64 1.5.6+dfsg-1+b1 [300 kB] Get:29 http://localhost:3142/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1+b1 [88.9 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libc6 amd64 2.40-4 [2804 kB] Get:31 http://localhost:3142/debian unstable/main amd64 base-files amd64 13.6 [72.8 kB] Get:32 http://localhost:3142/debian unstable/main amd64 debianutils amd64 5.21 [92.1 kB] Get:33 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257~rc2-3 [147 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libapt-pkg6.0t64 amd64 2.9.14 [1103 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libdebconfclient0 amd64 0.273 [10.1 kB] Get:57 http://localhost:3142/debian unstable/main amd64 base-passwd amd64 3.6.5 [53.1 kB] Get:58 http://localhost:3142/debian unstable/main amd64 gpgv amd64 2.2.45-2 [219 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libnettle8t64 amd64 3.10-1+b1 [305 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libhogweed6t64 amd64 3.10-1+b1 [335 kB] Get:61 http://localhost:3142/debian unstable/main amd64 libunistring5 amd64 1.2-1+b1 [429 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libidn2-0 amd64 2.3.7-2+b1 [129 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libp11-kit0 amd64 0.25.5-2+b1 [429 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libtasn1-6 amd64 4.19.0-3+b3 [49.5 kB] Get:65 http://localhost:3142/debian unstable/main amd64 libgnutls30t64 amd64 3.8.8-2 [1454 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libseccomp2 amd64 2.5.5-1+b3 [47.4 kB] Get:67 http://localhost:3142/debian unstable/main amd64 apt amd64 2.9.14 [1395 kB] Get:68 http://localhost:3142/debian unstable/main amd64 libc-bin amd64 2.40-4 [626 kB] Get:69 http://localhost:3142/debian unstable/main amd64 sysvinit-utils amd64 3.11-1 [33.1 kB] Get:70 http://localhost:3142/debian unstable/main amd64 libaudit-common all 1:4.0.2-2 [12.7 kB] Get:71 http://localhost:3142/debian unstable/main amd64 libcap-ng0 amd64 0.8.5-3+b1 [17.5 kB] Get:72 http://localhost:3142/debian unstable/main amd64 libaudit1 amd64 1:4.0.2-2 [54.9 kB] Get:73 http://localhost:3142/debian unstable/main amd64 libpam0g amd64 1.5.3-7+b1 [68.3 kB] Get:74 http://localhost:3142/debian unstable/main amd64 libpam-modules-bin amd64 1.5.3-7+b1 [54.1 kB] Get:75 http://localhost:3142/debian unstable/main amd64 libpam-modules amd64 1.5.3-7+b1 [267 kB] Get:76 http://localhost:3142/debian unstable/main amd64 logsave amd64 1.47.1-1+b1 [23.0 kB] Get:77 http://localhost:3142/debian unstable/main amd64 libext2fs2t64 amd64 1.47.1-1+b1 [211 kB] Get:78 http://localhost:3142/debian unstable/main amd64 e2fsprogs amd64 1.47.1-1+b1 [585 kB] Get:79 http://localhost:3142/debian unstable/main amd64 login amd64 1:4.16.0-2+really2.40.2-11 [81.5 kB] Get:80 http://localhost:3142/debian unstable/main amd64 libacl1 amd64 2.3.2-2+b1 [32.9 kB] Get:81 http://localhost:3142/debian unstable/main amd64 libmd0 amd64 1.1.0-2+b1 [36.3 kB] Get:82 http://localhost:3142/debian unstable/main amd64 openssl-provider-legacy amd64 3.3.2-2 [298 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libssl3t64 amd64 3.3.2-2 [2271 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libtinfo6 amd64 6.5-2+b1 [344 kB] Get:85 http://localhost:3142/debian unstable/main amd64 login.defs all 1:4.16.0-5 [185 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libsemanage2 amd64 3.7-2+b1 [91.2 kB] Get:87 http://localhost:3142/debian unstable/main amd64 passwd amd64 1:4.16.0-5 [1232 kB] Get:88 http://localhost:3142/debian unstable/main amd64 xz-utils amd64 5.6.3-1+b1 [542 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get:90 http://localhost:3142/debian unstable/main amd64 libjansson4 amd64 2.14-2+b3 [39.8 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libss2 amd64 1.47.1-1+b1 [27.9 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 100 MB in 1s (187 MB/s) (Reading database ... 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Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2 to /lib/x86_64-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libe2p.so.2.3 to /lib/x86_64-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2 to /lib/x86_64-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Leaving 'diversion of /lib/x86_64-linux-gnu/libext2fs.so.2.4 to /lib/x86_64-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Setting up libext2fs2t64:amd64 (1.47.1-1+b1) ... (Reading database ... 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(Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 13024 files and directories currently installed.) Preparing to unpack .../0-login.defs_1%3a4.16.0-5_all.deb ... Unpacking login.defs (1:4.16.0-5) over (1:4.16.0-4) ... Preparing to unpack .../1-libsemanage2_3.7-2+b1_amd64.deb ... Unpacking libsemanage2:amd64 (3.7-2+b1) over (3.7-2) ... Preparing to unpack .../2-passwd_1%3a4.16.0-5_amd64.deb ... Unpacking passwd (1:4.16.0-5) over (1:4.16.0-4) ... Preparing to unpack .../3-xz-utils_5.6.3-1+b1_amd64.deb ... Unpacking xz-utils (5.6.3-1+b1) over (5.6.2-2) ... Preparing to unpack .../4-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Preparing to unpack .../5-libjansson4_2.14-2+b3_amd64.deb ... Unpacking libjansson4:amd64 (2.14-2+b3) over (2.14-2+b2) ... Preparing to unpack .../6-libss2_1.47.1-1+b1_amd64.deb ... Unpacking libss2:amd64 (1.47.1-1+b1) over (1.47.1-1) ... Setting up login.defs (1:4.16.0-5) ... Installing new version of config file /etc/login.defs ... Setting up linux-libc-dev (6.11.10-1) ... Setting up libcom-err2:amd64 (1.47.1-1+b1) ... Setting up libgomp1:amd64 (14.2.0-8) ... Setting up libjansson4:amd64 (2.14-2+b3) ... Setting up libmpfr6:amd64 (4.2.1-1+b2) ... Setting up xz-utils (5.6.3-1+b1) ... Setting up libquadmath0:amd64 (14.2.0-8) ... Setting up libmpc3:amd64 (1.3.1-1+b3) ... Setting up libatomic1:amd64 (14.2.0-8) ... Setting up libss2:amd64 (1.47.1-1+b1) ... Setting up cpp-14-x86-64-linux-gnu (14.2.0-8) ... Setting up logsave (1.47.1-1+b1) ... Setting up cpp-14 (14.2.0-8) ... Setting up libubsan1:amd64 (14.2.0-8) ... Setting up mount (2.40.2-11) ... Setting up perl-modules-5.40 (5.40.0-8) ... Setting up libhwasan0:amd64 (14.2.0-8) ... Setting up libasan8:amd64 (14.2.0-8) ... Setting up libsemanage2:amd64 (3.7-2+b1) ... Setting up libtsan2:amd64 (14.2.0-8) ... Setting up libc-dev-bin (2.40-4) ... Setting up libcc1-0:amd64 (14.2.0-8) ... Setting up liblsan0:amd64 (14.2.0-8) ... Setting up libitm1:amd64 (14.2.0-8) ... Setting up login (1:4.16.0-2+really2.40.2-11) ... Setting up e2fsprogs (1.47.1-1+b1) ... Setting up libperl5.40:amd64 (5.40.0-8) ... Setting up perl (5.40.0-8) ... Setting up passwd (1:4.16.0-5) ... Setting up libc6-dev:amd64 (2.40-4) ... Setting up libgcc-14-dev:amd64 (14.2.0-8) ... Setting up libstdc++-14-dev:amd64 (14.2.0-8) ... Setting up gcc-14-x86-64-linux-gnu (14.2.0-8) ... Setting up gcc-14 (14.2.0-8) ... Setting up g++-14-x86-64-linux-gnu (14.2.0-8) ... Setting up g++-14 (14.2.0-8) ... Processing triggers for debianutils (5.21) ... Processing triggers for libc-bin (2.40-4) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'vg' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/vg.git Please use: git clone https://salsa.debian.org/med-team/vg.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 69.8 MB of source archives. Get:1 http://localhost:3142/debian unstable/main vg 1.59.0+ds-0.1 (dsc) [2839 B] Get:2 http://localhost:3142/debian unstable/main vg 1.59.0+ds-0.1 (tar) [69.7 MB] Get:3 http://localhost:3142/debian unstable/main vg 1.59.0+ds-0.1 (diff) [117 kB] Fetched 69.8 MB in 6s (12.0 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/vg-Xy8qiP/vg-1.59.0+ds' with '<>' I: NOTICE: Log filtering will replace 'build/vg-Xy8qiP' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), bsdextrautils | bsdmainutils, zlib1g-dev, rs, libffi-dev, protobuf-compiler, libprotoc-dev, libprotobuf-dev, libjansson-dev, libbz2-dev, libtinfo6, libncurses-dev, automake, libtool, jq, unzip, librdf0-dev, cmake, pkgconf, bc, gtk-doc-tools, bison, flex, gawk, liblz4-dev, liblzma-dev, libcairo2-dev, libpixman-1-dev, libdeflate-dev, libboost-program-options-dev, libjemalloc-dev, libbackward-cpp-dev, elfutils, libdw-dev, libelf-dev, libraptor2-dev, libsparsehash-dev, rapidjson-dev, libfml-dev, libfastahack-dev, libdivsufsort-dev, libtsl-hopscotch-map-dev, libvcflib-dev (>= 1.0.1), libhts-dev, help2man, python3:any, libsimde-dev, libzstd-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 Filtered Build-Depends: debhelper-compat (= 13), bsdextrautils, zlib1g-dev, rs, libffi-dev, protobuf-compiler, libprotoc-dev, libprotobuf-dev, libjansson-dev, libbz2-dev, libtinfo6, libncurses-dev, automake, libtool, jq, unzip, librdf0-dev, cmake, pkgconf, bc, gtk-doc-tools, bison, flex, gawk, liblz4-dev, liblzma-dev, libcairo2-dev, libpixman-1-dev, libdeflate-dev, libboost-program-options-dev, libjemalloc-dev, libbackward-cpp-dev, elfutils, libdw-dev, libelf-dev, libraptor2-dev, libsparsehash-dev, rapidjson-dev, libfml-dev, libfastahack-dev, libdivsufsort-dev, libtsl-hopscotch-map-dev, libvcflib-dev (>= 1.0.1), libhts-dev, help2man, python3:any, libsimde-dev, libzstd-dev, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-riscv64:amd64, libc-dev:riscv64, libstdc++-dev:riscv64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1567 B] Get:5 copy:/<>/apt_archive ./ Packages [1399 B] Fetched 3581 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev bc binutils-riscv64-linux-gnu bison bsdextrautils cmake cmake-data comerr-dev:riscv64 cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu cross-exe-wrapper:riscv64 crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism docbook docbook-to-man docbook-xml docbook-xsl dwz elfutils fakeroot file flex fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gawk gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base girepository-tools girepository-tools:riscv64 groff-base gtk-doc-tools help2man icu-devtools intltool-debian jq krb5-multidev:riscv64 libarchive-zip-perl libarchive13t64 libasan8:riscv64 libasan8-riscv64-cross libasm1t64 libatomic1:riscv64 libatomic1-riscv64-cross libbackward-cpp-dev libblkid-dev:riscv64 libblkid1:riscv64 libboost-program-options-dev:riscv64 libboost-program-options1.83-dev:riscv64 libboost-program-options1.83.0:riscv64 libboost1.83-dev:riscv64 libbrotli-dev:riscv64 libbrotli1 libbrotli1:riscv64 libbz2-1.0:riscv64 libbz2-dev:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcairo-gobject2:riscv64 libcairo-script-interpreter2:riscv64 libcairo2:riscv64 libcairo2-dev:riscv64 libcom-err2:riscv64 libcrypt-dev:riscv64 libcrypt1:riscv64 libcurl3t64-gnutls libcurl3t64-gnutls:riscv64 libcurl4-gnutls-dev:riscv64 libcurl4t64 libdb5.3t64:riscv64 libdebhelper-perl libdebuginfod-common libdebuginfod1t64 libdeflate-dev:riscv64 libdeflate0:riscv64 libdisorder-dev:riscv64 libdisorder0:riscv64 libdivsufsort-dev:riscv64 libdivsufsort3:riscv64 libdw-dev:riscv64 libdw1t64 libdw1t64:riscv64 libelf-dev:riscv64 libelf1t64 libelf1t64:riscv64 libevent-2.1-7t64:riscv64 libexpat1 libexpat1:riscv64 libexpat1-dev:riscv64 libfakeroot libfastahack-dev:riscv64 libfastahack0:riscv64 libffi-dev:riscv64 libffi8:riscv64 libfile-stripnondeterminism-perl libfml-dev:riscv64 libfml0:riscv64 libfontconfig-dev:riscv64 libfontconfig1:riscv64 libfreetype-dev:riscv64 libfreetype6:riscv64 libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgcrypt20:riscv64 libgio-2.0-dev:riscv64 libgio-2.0-dev-bin libgirepository-2.0-0 libgirepository-2.0-0:riscv64 libglib2.0-0t64 libglib2.0-0t64:riscv64 libglib2.0-bin libglib2.0-data libglib2.0-dev:riscv64 libglib2.0-dev-bin libgmp-dev:riscv64 libgmp10:riscv64 libgmpxx4ldbl:riscv64 libgnutls-dane0t64:riscv64 libgnutls-openssl27t64:riscv64 libgnutls28-dev:riscv64 libgnutls30t64:riscv64 libgomp1:riscv64 libgomp1-riscv64-cross libgpg-error0:riscv64 libgssapi-krb5-2 libgssapi-krb5-2:riscv64 libgssrpc4t64:riscv64 libhogweed6t64:riscv64 libhts-dev:riscv64 libhts3t64:riscv64 libhtscodecs2:riscv64 libice-dev:riscv64 libice6:riscv64 libicu-dev:riscv64 libicu72 libicu72:riscv64 libidn2-0:riscv64 libidn2-dev:riscv64 libitm1:riscv64 libitm1-riscv64-cross libjansson-dev:riscv64 libjansson4:riscv64 libjemalloc-dev:riscv64 libjemalloc2:riscv64 libjq1 libjson-c5 libjsoncpp26 libk5crypto3 libk5crypto3:riscv64 libkadm5clnt-mit12:riscv64 libkadm5srv-mit12:riscv64 libkdb5-10t64:riscv64 libkeyutils1 libkeyutils1:riscv64 libkrb5-3 libkrb5-3:riscv64 libkrb5-dev:riscv64 libkrb5support0 libkrb5support0:riscv64 libldap-2.5-0 libldap-2.5-0:riscv64 libldap-dev:riscv64 liblocale-gettext-perl liblsan0:riscv64 liblsan0-riscv64-cross libltdl7:riscv64 liblz4-1:riscv64 liblz4-dev:riscv64 liblzma-dev:riscv64 liblzma5:riscv64 liblzo2-2:riscv64 libmagic-mgc libmagic1t64 libmhash2:riscv64 libmount-dev:riscv64 libmount1:riscv64 libncurses-dev:riscv64 libncurses6:riscv64 libncursesw6 libncursesw6:riscv64 libnettle8t64:riscv64 libnghttp2-14 libnghttp2-14:riscv64 libnghttp2-dev:riscv64 libnghttp3-9 libnghttp3-9:riscv64 libnghttp3-dev:riscv64 libngtcp2-16 libngtcp2-16:riscv64 libngtcp2-crypto-gnutls-dev:riscv64 libngtcp2-crypto-gnutls8 libngtcp2-crypto-gnutls8:riscv64 libngtcp2-dev:riscv64 libnsl2 libonig5 libosp5 libp11-kit-dev:riscv64 libp11-kit0:riscv64 libpcre2-16-0:riscv64 libpcre2-32-0:riscv64 libpcre2-8-0:riscv64 libpcre2-dev:riscv64 libpcre2-posix3:riscv64 libpipeline1 libpixman-1-0:riscv64 libpixman-1-dev:riscv64 libpkgconf3 libpng-dev:riscv64 libpng16-16t64:riscv64 libproc2-0 libprotobuf-dev:riscv64 libprotobuf-lite32t64:riscv64 libprotobuf32t64 libprotobuf32t64:riscv64 libprotoc-dev:riscv64 libprotoc32t64 libprotoc32t64:riscv64 libpsl-dev:riscv64 libpsl5t64 libpsl5t64:riscv64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libraptor2-0:riscv64 libraptor2-dev:riscv64 librasqal3-dev:riscv64 librasqal3t64:riscv64 librdf0-dev:riscv64 librdf0t64:riscv64 libreadline8t64 librhash1 librtmp-dev:riscv64 librtmp1 librtmp1:riscv64 libsasl2-2 libsasl2-2:riscv64 libsasl2-modules-db libsasl2-modules-db:riscv64 libselinux1:riscv64 libselinux1-dev:riscv64 libsepol-dev:riscv64 libsepol2:riscv64 libsigsegv2 libsimde-dev libsm-dev:riscv64 libsm6:riscv64 libsmithwaterman-dev:riscv64 libsmithwaterman0:riscv64 libsparsehash-dev libsqlite3-0 libssh2-1-dev:riscv64 libssh2-1t64 libssh2-1t64:riscv64 libssl-dev:riscv64 libssl3t64:riscv64 libssw-dev:riscv64 libssw0:riscv64 libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross libstdc++6:riscv64 libstdc++6-riscv64-cross libsysprof-capture-4-dev:riscv64 libtabixpp-dev:riscv64 libtabixpp0t64:riscv64 libtasn1-6:riscv64 libtasn1-6-dev:riscv64 libtinfo6:riscv64 libtirpc-common libtirpc3t64 libtool libtsan2:riscv64 libtsan2-riscv64-cross libtsl-hopscotch-map-dev libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libunbound8:riscv64 libunistring5:riscv64 libuuid1:riscv64 libuv1t64 libvcflib-dev:riscv64 libvcflib2:riscv64 libwfa2-0:riscv64 libwfa2-dev:riscv64 libx11-6:riscv64 libx11-data libx11-dev:riscv64 libxau-dev:riscv64 libxau6:riscv64 libxcb-render0:riscv64 libxcb-render0-dev:riscv64 libxcb-shm0:riscv64 libxcb-shm0-dev:riscv64 libxcb1:riscv64 libxcb1-dev:riscv64 libxdmcp-dev:riscv64 libxdmcp6:riscv64 libxext-dev:riscv64 libxext6:riscv64 libxml2 libxml2:riscv64 libxml2-dev:riscv64 libxrender-dev:riscv64 libxrender1:riscv64 libxslt1-dev:riscv64 libxslt1.1 libxslt1.1:riscv64 libxxhash0:riscv64 libyajl-dev:riscv64 libyajl2:riscv64 libzstd-dev:riscv64 libzstd1:riscv64 linux-libc-dev-riscv64-cross m4 man-db media-types native-architecture netbase nettle-dev:riscv64 opensp pkgconf pkgconf:riscv64 pkgconf-bin po-debconf procps protobuf-compiler python3 python3-autocommand python3-inflect python3-jaraco.context python3-jaraco.functools python3-lxml python3-minimal python3-more-itertools python3-packaging python3-pkg-resources python3-pygments python3-typeguard python3-typing-extensions python3.12 python3.12-minimal qemu-user rapidjson-dev readline-common rs sensible-utils sgml-base sgml-data ucf unzip uuid-dev:riscv64 x11-common x11proto-core-dev x11proto-dev xml-core xorg-sgml-doctools xsltproc xtrans-dev zlib1g:riscv64 zlib1g-dev:riscv64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc bison-doc cmake-doc cmake-format elpa-cmake-mode ninja-build doc-base:riscv64 gcc-14-locales cpp-14-doc cpp-doc dh-make docbook-defguide docbook-dsssl psgml dbtoepub docbook-xsl-doc-html | docbook-xsl-doc-pdf | docbook-xsl-doc-text | docbook-xsl-doc docbook-xsl-saxon fop libsaxon-java libxalan2-java libxslthl-java xalan flex-doc gcc-14-doc gawk-doc manpages-dev gdb-riscv64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff dblatex krb5-doc:riscv64 lrzip binutils-dev libdw-dev libunwind-dev libboost1.83-doc:riscv64 libboost-atomic1.83-dev:riscv64 libboost-chrono1.83-dev:riscv64 libboost-container1.83-dev:riscv64 libboost-context1.83-dev:riscv64 libboost-contract1.83-dev:riscv64 libboost-coroutine1.83-dev:riscv64 libboost-date-time1.83-dev:riscv64 libboost-exception1.83-dev:riscv64 libboost-fiber1.83-dev:riscv64 libboost-filesystem1.83-dev:riscv64 libboost-graph-parallel1.83-dev:riscv64 libboost-graph1.83-dev:riscv64 libboost-iostreams1.83-dev:riscv64 libboost-json1.83-dev:riscv64 libboost-locale1.83-dev:riscv64 libboost-log1.83-dev:riscv64 libboost-math1.83-dev:riscv64 libboost-mpi-python1.83-dev:riscv64 libboost-mpi1.83-dev:riscv64 libboost-nowide1.83-dev:riscv64 libboost-numpy1.83-dev:riscv64 libboost-python1.83-dev:riscv64 libboost-random1.83-dev:riscv64 libboost-regex1.83-dev:riscv64 libboost-serialization1.83-dev:riscv64 libboost-stacktrace1.83-dev:riscv64 libboost-system1.83-dev:riscv64 libboost-test1.83-dev:riscv64 libboost-thread1.83-dev:riscv64 libboost-timer1.83-dev:riscv64 libboost-type-erasure1.83-dev:riscv64 libboost-url1.83-dev:riscv64 libboost-wave1.83-dev:riscv64 libboost1.83-tools-dev:riscv64 libmpfrc++-dev:riscv64 libntl-dev:riscv64 glibc-doc:riscv64 libc-l10n:riscv64 locales:riscv64 libnss-nis:riscv64 libnss-nisplus:riscv64 manpages-dev:riscv64 libcairo2-doc:riscv64 libcurl4-doc:riscv64 libidn-dev:riscv64 freetype2-doc:riscv64 rng-tools:riscv64 gir1.2-glib-2.0-dev:riscv64 libglib2.0-doc:riscv64 libgdk-pixbuf2.0-bin libxml2-utils low-memory-monitor low-memory-monitor:riscv64 gmp-doc:riscv64 libgmp10-doc:riscv64 libmpfr-dev:riscv64 dns-root-data:riscv64 gnutls-bin:riscv64 gnutls-doc:riscv64 krb5-doc krb5-user krb5-user:riscv64 libice-doc:riscv64 icu-doc:riscv64 binutils:riscv64 liblzma-doc:riscv64 cryptsetup-bin:riscv64 ncurses-doc:riscv64 libnghttp2-doc:riscv64 p11-kit-doc:riscv64 raptor2-utils:riscv64 libraptor2-doc:riscv64 librasqal3-doc:riscv64 rasqal-utils:riscv64 librdf-perl:riscv64 librdf-ruby:riscv64 python-librdf:riscv64 librdf-storage-mysql:riscv64 librdf-storage-postgresql:riscv64 librdf-storage-sqlite:riscv64 librdf-storage-virtuoso:riscv64 redland-utils:riscv64 libsm-doc:riscv64 libssl-doc:riscv64 libstdc++-14-doc:riscv64 libtool-doc gfortran | fortran95-compiler gcj-jdk uuid-runtime:riscv64 libx11-doc:riscv64 libxcb-doc:riscv64 libxext-doc:riscv64 m4-doc apparmor less www-browser doc-base libmail-box-perl protobuf-mode-el python3-doc python3-tk python3-venv python-lxml-doc python3-setuptools python-pygments-doc ttf-bitstream-vera python3.12-venv python3.12-doc binfmt-support rapidjson-doc readline-doc sgml-base-doc perlsgml w3-recs zip Recommended packages: libfl-dev curl | wget | lynx bzip2-doc:riscv64 ca-certificates ca-certificates:riscv64 libarchive-cpio-perl shared-mime-info xdg-user-dirs shared-mime-info:riscv64 xdg-user-dirs:riscv64 libgpg-error-l10n:riscv64 krb5-locales krb5-locales:riscv64 libldap-common libldap-common:riscv64 libgpm2:riscv64 libgpm2 libpng-tools:riscv64 publicsuffix publicsuffix:riscv64 raptor2-utils:riscv64 rasqal-utils:riscv64 redland-utils:riscv64 libsasl2-modules libsasl2-modules:riscv64 libtasn1-doc:riscv64 libltdl-dev libmail-sendmail-perl psmisc linux-sysctl-defaults libprotobuf-dev python3-bs4 python3-cssselect python3-html5lib qemu-user-binfmt The following NEW packages will be installed: autoconf automake autopoint autotools-dev bc binutils-riscv64-linux-gnu bison bsdextrautils cmake cmake-data comerr-dev:riscv64 cpp-14-riscv64-linux-gnu cpp-riscv64-linux-gnu cross-exe-wrapper:riscv64 crossbuild-essential-riscv64 debhelper dh-autoreconf dh-strip-nondeterminism docbook docbook-to-man docbook-xml docbook-xsl dwz elfutils fakeroot file flex fontconfig-config fonts-dejavu-core fonts-dejavu-mono g++-14-riscv64-linux-gnu g++-riscv64-linux-gnu gawk gcc-14-base:riscv64 gcc-14-cross-base gcc-14-riscv64-linux-gnu gcc-14-riscv64-linux-gnu-base gcc-riscv64-linux-gnu gettext gettext-base girepository-tools girepository-tools:riscv64 groff-base gtk-doc-tools help2man icu-devtools intltool-debian jq krb5-multidev:riscv64 libarchive-zip-perl libarchive13t64 libasan8:riscv64 libasan8-riscv64-cross libasm1t64 libatomic1:riscv64 libatomic1-riscv64-cross libbackward-cpp-dev libblkid-dev:riscv64 libblkid1:riscv64 libboost-program-options-dev:riscv64 libboost-program-options1.83-dev:riscv64 libboost-program-options1.83.0:riscv64 libboost1.83-dev:riscv64 libbrotli-dev:riscv64 libbrotli1 libbrotli1:riscv64 libbz2-1.0:riscv64 libbz2-dev:riscv64 libc6:riscv64 libc6-dev:riscv64 libc6-dev-riscv64-cross libc6-riscv64-cross libcairo-gobject2:riscv64 libcairo-script-interpreter2:riscv64 libcairo2:riscv64 libcairo2-dev:riscv64 libcom-err2:riscv64 libcrypt-dev:riscv64 libcrypt1:riscv64 libcurl3t64-gnutls libcurl3t64-gnutls:riscv64 libcurl4-gnutls-dev:riscv64 libcurl4t64 libdb5.3t64:riscv64 libdebhelper-perl libdebuginfod-common libdebuginfod1t64 libdeflate-dev:riscv64 libdeflate0:riscv64 libdisorder-dev:riscv64 libdisorder0:riscv64 libdivsufsort-dev:riscv64 libdivsufsort3:riscv64 libdw-dev:riscv64 libdw1t64 libdw1t64:riscv64 libelf-dev:riscv64 libelf1t64 libelf1t64:riscv64 libevent-2.1-7t64:riscv64 libexpat1 libexpat1:riscv64 libexpat1-dev:riscv64 libfakeroot libfastahack-dev:riscv64 libfastahack0:riscv64 libffi-dev:riscv64 libffi8:riscv64 libfile-stripnondeterminism-perl libfml-dev:riscv64 libfml0:riscv64 libfontconfig-dev:riscv64 libfontconfig1:riscv64 libfreetype-dev:riscv64 libfreetype6:riscv64 libgcc-14-dev:riscv64 libgcc-14-dev-riscv64-cross libgcc-s1:riscv64 libgcc-s1-riscv64-cross libgcrypt20:riscv64 libgio-2.0-dev:riscv64 libgio-2.0-dev-bin libgirepository-2.0-0 libgirepository-2.0-0:riscv64 libglib2.0-0t64 libglib2.0-0t64:riscv64 libglib2.0-bin libglib2.0-data libglib2.0-dev:riscv64 libglib2.0-dev-bin libgmp-dev:riscv64 libgmp10:riscv64 libgmpxx4ldbl:riscv64 libgnutls-dane0t64:riscv64 libgnutls-openssl27t64:riscv64 libgnutls28-dev:riscv64 libgnutls30t64:riscv64 libgomp1:riscv64 libgomp1-riscv64-cross libgpg-error0:riscv64 libgssapi-krb5-2 libgssapi-krb5-2:riscv64 libgssrpc4t64:riscv64 libhogweed6t64:riscv64 libhts-dev:riscv64 libhts3t64:riscv64 libhtscodecs2:riscv64 libice-dev:riscv64 libice6:riscv64 libicu-dev:riscv64 libicu72 libicu72:riscv64 libidn2-0:riscv64 libidn2-dev:riscv64 libitm1:riscv64 libitm1-riscv64-cross libjansson-dev:riscv64 libjansson4:riscv64 libjemalloc-dev:riscv64 libjemalloc2:riscv64 libjq1 libjson-c5 libjsoncpp26 libk5crypto3 libk5crypto3:riscv64 libkadm5clnt-mit12:riscv64 libkadm5srv-mit12:riscv64 libkdb5-10t64:riscv64 libkeyutils1 libkeyutils1:riscv64 libkrb5-3 libkrb5-3:riscv64 libkrb5-dev:riscv64 libkrb5support0 libkrb5support0:riscv64 libldap-2.5-0 libldap-2.5-0:riscv64 libldap-dev:riscv64 liblocale-gettext-perl liblsan0:riscv64 liblsan0-riscv64-cross libltdl7:riscv64 liblz4-1:riscv64 liblz4-dev:riscv64 liblzma-dev:riscv64 liblzma5:riscv64 liblzo2-2:riscv64 libmagic-mgc libmagic1t64 libmhash2:riscv64 libmount-dev:riscv64 libmount1:riscv64 libncurses-dev:riscv64 libncurses6:riscv64 libncursesw6 libncursesw6:riscv64 libnettle8t64:riscv64 libnghttp2-14 libnghttp2-14:riscv64 libnghttp2-dev:riscv64 libnghttp3-9 libnghttp3-9:riscv64 libnghttp3-dev:riscv64 libngtcp2-16 libngtcp2-16:riscv64 libngtcp2-crypto-gnutls-dev:riscv64 libngtcp2-crypto-gnutls8 libngtcp2-crypto-gnutls8:riscv64 libngtcp2-dev:riscv64 libnsl2 libonig5 libosp5 libp11-kit-dev:riscv64 libp11-kit0:riscv64 libpcre2-16-0:riscv64 libpcre2-32-0:riscv64 libpcre2-8-0:riscv64 libpcre2-dev:riscv64 libpcre2-posix3:riscv64 libpipeline1 libpixman-1-0:riscv64 libpixman-1-dev:riscv64 libpkgconf3 libpng-dev:riscv64 libpng16-16t64:riscv64 libproc2-0 libprotobuf-dev:riscv64 libprotobuf-lite32t64:riscv64 libprotobuf32t64 libprotobuf32t64:riscv64 libprotoc-dev:riscv64 libprotoc32t64 libprotoc32t64:riscv64 libpsl-dev:riscv64 libpsl5t64 libpsl5t64:riscv64 libpython3-stdlib libpython3.12-minimal libpython3.12-stdlib libraptor2-0:riscv64 libraptor2-dev:riscv64 librasqal3-dev:riscv64 librasqal3t64:riscv64 librdf0-dev:riscv64 librdf0t64:riscv64 libreadline8t64 librhash1 librtmp-dev:riscv64 librtmp1 librtmp1:riscv64 libsasl2-2 libsasl2-2:riscv64 libsasl2-modules-db libsasl2-modules-db:riscv64 libselinux1:riscv64 libselinux1-dev:riscv64 libsepol-dev:riscv64 libsepol2:riscv64 libsigsegv2 libsimde-dev libsm-dev:riscv64 libsm6:riscv64 libsmithwaterman-dev:riscv64 libsmithwaterman0:riscv64 libsparsehash-dev libsqlite3-0 libssh2-1-dev:riscv64 libssh2-1t64 libssh2-1t64:riscv64 libssl-dev:riscv64 libssl3t64:riscv64 libssw-dev:riscv64 libssw0:riscv64 libstdc++-14-dev:riscv64 libstdc++-14-dev-riscv64-cross libstdc++6:riscv64 libstdc++6-riscv64-cross libsysprof-capture-4-dev:riscv64 libtabixpp-dev:riscv64 libtabixpp0t64:riscv64 libtasn1-6:riscv64 libtasn1-6-dev:riscv64 libtinfo6:riscv64 libtirpc-common libtirpc3t64 libtool libtsan2:riscv64 libtsan2-riscv64-cross libtsl-hopscotch-map-dev libubsan1:riscv64 libubsan1-riscv64-cross libuchardet0 libunbound8:riscv64 libunistring5:riscv64 libuuid1:riscv64 libuv1t64 libvcflib-dev:riscv64 libvcflib2:riscv64 libwfa2-0:riscv64 libwfa2-dev:riscv64 libx11-6:riscv64 libx11-data libx11-dev:riscv64 libxau-dev:riscv64 libxau6:riscv64 libxcb-render0:riscv64 libxcb-render0-dev:riscv64 libxcb-shm0:riscv64 libxcb-shm0-dev:riscv64 libxcb1:riscv64 libxcb1-dev:riscv64 libxdmcp-dev:riscv64 libxdmcp6:riscv64 libxext-dev:riscv64 libxext6:riscv64 libxml2 libxml2:riscv64 libxml2-dev:riscv64 libxrender-dev:riscv64 libxrender1:riscv64 libxslt1-dev:riscv64 libxslt1.1 libxslt1.1:riscv64 libxxhash0:riscv64 libyajl-dev:riscv64 libyajl2:riscv64 libzstd-dev:riscv64 libzstd1:riscv64 linux-libc-dev-riscv64-cross m4 man-db media-types native-architecture netbase nettle-dev:riscv64 opensp pkgconf pkgconf:riscv64 pkgconf-bin po-debconf procps protobuf-compiler python3 python3-autocommand python3-inflect python3-jaraco.context python3-jaraco.functools python3-lxml python3-minimal python3-more-itertools python3-packaging python3-pkg-resources python3-pygments python3-typeguard python3-typing-extensions python3.12 python3.12-minimal qemu-user rapidjson-dev readline-common rs sbuild-build-depends-main-dummy:riscv64 sensible-utils sgml-base sgml-data ucf unzip uuid-dev:riscv64 x11-common x11proto-core-dev x11proto-dev xml-core xorg-sgml-doctools xsltproc xtrans-dev zlib1g:riscv64 zlib1g-dev:riscv64 0 upgraded, 377 newly installed, 0 to remove and 0 not upgraded. Need to get 346 MB of archives. After this operation, 2068 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [1220 B] Get:2 http://localhost:3142/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get:3 http://localhost:3142/debian unstable/main amd64 flex amd64 2.6.4-8.2+b3 [423 kB] Get:4 http://localhost:3142/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get:5 http://localhost:3142/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get:6 http://localhost:3142/debian unstable/main amd64 libsigsegv2 amd64 2.14-1+b2 [34.4 kB] Get:7 http://localhost:3142/debian unstable/main amd64 gawk amd64 1:5.2.1-2+b1 [674 kB] Get:8 http://localhost:3142/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get:9 http://localhost:3142/debian unstable/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get:10 http://localhost:3142/debian unstable/main amd64 libdebuginfod-common all 0.192-4 [23.7 kB] Get:11 http://localhost:3142/debian unstable/main amd64 liblocale-gettext-perl amd64 1.07-7+b1 [15.3 kB] Get:12 http://localhost:3142/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-3 [815 kB] Get:13 http://localhost:3142/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get:14 http://localhost:3142/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-3 [2162 kB] Get:15 http://localhost:3142/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get:16 http://localhost:3142/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get:17 http://localhost:3142/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get:18 http://localhost:3142/debian unstable/main amd64 libncursesw6 amd64 6.5-2+b1 [136 kB] Get:19 http://localhost:3142/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get:20 http://localhost:3142/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get:21 http://localhost:3142/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get:22 http://localhost:3142/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get:23 http://localhost:3142/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get:24 http://localhost:3142/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get:25 http://localhost:3142/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get:26 http://localhost:3142/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get:27 http://localhost:3142/debian unstable/main amd64 libsqlite3-0 amd64 3.46.1-1 [913 kB] Get:28 http://localhost:3142/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-3 [1966 kB] Get:29 http://localhost:3142/debian unstable/main amd64 python3.12 amd64 3.12.7-3 [671 kB] Get:30 http://localhost:3142/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get:31 http://localhost:3142/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get:32 http://localhost:3142/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get:33 http://localhost:3142/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get:34 http://localhost:3142/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get:35 http://localhost:3142/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get:36 http://localhost:3142/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get:37 http://localhost:3142/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get:38 http://localhost:3142/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get:39 http://localhost:3142/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get:40 http://localhost:3142/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get:41 http://localhost:3142/debian unstable/main amd64 bsdextrautils amd64 2.40.2-11 [91.5 kB] Get:42 http://localhost:3142/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get:43 http://localhost:3142/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get:44 http://localhost:3142/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get:45 http://localhost:3142/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get:46 http://localhost:3142/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get:47 http://localhost:3142/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get:48 http://localhost:3142/debian unstable/main amd64 bc amd64 1.07.1-4 [103 kB] Get:49 http://localhost:3142/debian unstable/main amd64 binutils-riscv64-linux-gnu amd64 2.43.1-5 [1400 kB] Get:50 http://localhost:3142/debian unstable/main amd64 bison amd64 2:3.8.2+dfsg-1+b2 [1170 kB] Get:51 http://localhost:3142/debian unstable/main amd64 cmake-data all 3.31.1-1 [2267 kB] Get:52 http://localhost:3142/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get:53 http://localhost:3142/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get:54 http://localhost:3142/debian unstable/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get:55 http://localhost:3142/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get:56 http://localhost:3142/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get:57 http://localhost:3142/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get:58 http://localhost:3142/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get:59 http://localhost:3142/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get:60 http://localhost:3142/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get:61 http://localhost:3142/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get:62 http://localhost:3142/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get:63 http://localhost:3142/debian unstable/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get:64 http://localhost:3142/debian unstable/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get:65 http://localhost:3142/debian unstable/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get:66 http://localhost:3142/debian unstable/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get:67 http://localhost:3142/debian unstable/main amd64 cmake amd64 3.31.1-1 [11.9 MB] Get:68 http://localhost:3142/debian unstable/main riscv64 gcc-14-base riscv64 14.2.0-8 [47.2 kB] Get:69 http://localhost:3142/debian unstable/main riscv64 libgcc-s1 riscv64 14.2.0-8 [56.7 kB] Get:70 http://localhost:3142/debian unstable/main riscv64 libc6 riscv64 2.40-4 [2430 kB] Get:71 http://localhost:3142/debian unstable/main riscv64 libcrypt1 riscv64 1:4.4.36-5 [105 kB] Get:72 http://localhost:3142/debian unstable/main riscv64 libcrypt-dev riscv64 1:4.4.36-5 [221 kB] Get:73 http://localhost:3142/debian unstable/main riscv64 libc6-dev riscv64 2.40-4 [3088 kB] Get:74 http://localhost:3142/debian unstable/main riscv64 libcom-err2 riscv64 1.47.1-1+b1 [22.8 kB] Get:75 http://localhost:3142/debian unstable/main riscv64 comerr-dev riscv64 2.1-1.47.1-1+b1 [58.2 kB] Get:76 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu-base amd64 14.2.0-6cross1 [47.0 kB] Get:77 http://localhost:3142/debian unstable/main amd64 cpp-14-riscv64-linux-gnu amd64 14.2.0-6cross1 [13.3 MB] Get:78 http://localhost:3142/debian unstable/main amd64 cpp-riscv64-linux-gnu amd64 4:14.2.0-1 [4848 B] Get:79 http://localhost:3142/debian unstable/main amd64 qemu-user amd64 1:9.1.1+ds-5 [62.6 MB] Get:80 http://localhost:3142/debian unstable/main riscv64 cross-exe-wrapper riscv64 0.2.3 [6336 B] Get:81 http://localhost:3142/debian unstable/main amd64 gcc-14-cross-base all 14.2.0-6cross1 [42.2 kB] Get:82 http://localhost:3142/debian unstable/main amd64 libc6-riscv64-cross all 2.40-3cross1 [1141 kB] Get:83 http://localhost:3142/debian unstable/main amd64 libgcc-s1-riscv64-cross all 14.2.0-6cross1 [56.7 kB] Get:84 http://localhost:3142/debian unstable/main amd64 libgomp1-riscv64-cross all 14.2.0-6cross1 [129 kB] Get:85 http://localhost:3142/debian unstable/main amd64 libitm1-riscv64-cross all 14.2.0-6cross1 [25.2 kB] Get:86 http://localhost:3142/debian unstable/main amd64 libatomic1-riscv64-cross all 14.2.0-6cross1 [8304 B] Get:87 http://localhost:3142/debian unstable/main amd64 libasan8-riscv64-cross all 14.2.0-6cross1 [2356 kB] Get:88 http://localhost:3142/debian unstable/main amd64 liblsan0-riscv64-cross all 14.2.0-6cross1 [1077 kB] Get:89 http://localhost:3142/debian unstable/main amd64 libtsan2-riscv64-cross all 14.2.0-6cross1 [2231 kB] Get:90 http://localhost:3142/debian unstable/main amd64 libstdc++6-riscv64-cross all 14.2.0-6cross1 [660 kB] Get:91 http://localhost:3142/debian unstable/main amd64 libubsan1-riscv64-cross all 14.2.0-6cross1 [978 kB] Get:92 http://localhost:3142/debian unstable/main amd64 libgcc-14-dev-riscv64-cross all 14.2.0-6cross1 [5170 kB] Get:93 http://localhost:3142/debian unstable/main amd64 gcc-14-riscv64-linux-gnu amd64 14.2.0-6cross1 [25.7 MB] Get:94 http://localhost:3142/debian unstable/main amd64 gcc-riscv64-linux-gnu amd64 4:14.2.0-1 [1444 B] Get:95 http://localhost:3142/debian unstable/main amd64 linux-libc-dev-riscv64-cross all 6.11.2-1cross1 [2236 kB] Get:96 http://localhost:3142/debian unstable/main amd64 libc6-dev-riscv64-cross all 2.40-3cross1 [3085 kB] Get:97 http://localhost:3142/debian unstable/main amd64 libstdc++-14-dev-riscv64-cross all 14.2.0-6cross1 [4939 kB] Get:98 http://localhost:3142/debian unstable/main amd64 g++-14-riscv64-linux-gnu amd64 14.2.0-6cross1 [14.3 MB] Get:99 http://localhost:3142/debian unstable/main amd64 g++-riscv64-linux-gnu amd64 4:14.2.0-1 [1200 B] Get:100 http://localhost:3142/debian unstable/main amd64 crossbuild-essential-riscv64 all 12.12 [3544 B] Get:101 http://localhost:3142/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get:102 http://localhost:3142/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get:103 http://localhost:3142/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get:104 http://localhost:3142/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:105 http://localhost:3142/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:106 http://localhost:3142/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:107 http://localhost:3142/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get:108 http://localhost:3142/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get:109 http://localhost:3142/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get:110 http://localhost:3142/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:111 http://localhost:3142/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:112 http://localhost:3142/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get:113 http://localhost:3142/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get:114 http://localhost:3142/debian unstable/main amd64 sgml-data all 2.0.11+nmu1 [179 kB] Get:115 http://localhost:3142/debian unstable/main amd64 docbook all 4.5-11 [126 kB] Get:116 http://localhost:3142/debian unstable/main amd64 libosp5 amd64 1.5.2-15 [964 kB] Get:117 http://localhost:3142/debian unstable/main amd64 opensp amd64 1.5.2-15 [450 kB] Get:118 http://localhost:3142/debian unstable/main amd64 docbook-to-man amd64 1:2.0.0-47 [73.6 kB] Get:119 http://localhost:3142/debian unstable/main amd64 docbook-xml all 4.5-13 [77.4 kB] Get:120 http://localhost:3142/debian unstable/main amd64 docbook-xsl all 1.79.2+dfsg-7 [1221 kB] Get:121 http://localhost:3142/debian unstable/main amd64 libdw1t64 amd64 0.192-4 [255 kB] Get:122 http://localhost:3142/debian unstable/main amd64 libasm1t64 amd64 0.192-4 [28.4 kB] Get:123 http://localhost:3142/debian unstable/main amd64 libnghttp3-9 amd64 1.4.0-1+b1 [63.6 kB] Get:124 http://localhost:3142/debian unstable/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get:125 http://localhost:3142/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get:126 http://localhost:3142/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.11.0-1 [359 kB] Get:127 http://localhost:3142/debian unstable/main amd64 libjson-c5 amd64 0.18+ds-1 [46.0 kB] Get:128 http://localhost:3142/debian unstable/main amd64 libdebuginfod1t64 amd64 0.192-4 [32.4 kB] Get:129 http://localhost:3142/debian unstable/main amd64 elfutils amd64 0.192-4 [505 kB] Get:130 http://localhost:3142/debian unstable/main amd64 libfakeroot amd64 1.36-1 [29.1 kB] Get:131 http://localhost:3142/debian unstable/main amd64 fakeroot amd64 1.36-1 [75.1 kB] Get:132 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get:133 http://localhost:3142/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get:134 http://localhost:3142/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get:135 http://localhost:3142/debian unstable/main riscv64 libffi8 riscv64 3.4.6-1 [21.4 kB] Get:136 http://localhost:3142/debian unstable/main riscv64 libatomic1 riscv64 14.2.0-8 [8600 B] Get:137 http://localhost:3142/debian unstable/main riscv64 libblkid1 riscv64 2.40.2-11 [190 kB] Get:138 http://localhost:3142/debian unstable/main riscv64 libpcre2-8-0 riscv64 10.44-4 [281 kB] Get:139 http://localhost:3142/debian unstable/main riscv64 libselinux1 riscv64 3.7-3+b1 [80.0 kB] Get:140 http://localhost:3142/debian unstable/main riscv64 libmount1 riscv64 2.40.2-11 [216 kB] Get:141 http://localhost:3142/debian unstable/main riscv64 zlib1g riscv64 1:1.3.dfsg+really1.3.1-1+b1 [85.7 kB] Get:142 http://localhost:3142/debian unstable/main riscv64 libglib2.0-0t64 riscv64 2.82.2-3 [1513 kB] Get:143 http://localhost:3142/debian unstable/main riscv64 libgirepository-2.0-0 riscv64 2.82.2-3 [139 kB] Get:144 http://localhost:3142/debian unstable/main riscv64 girepository-tools riscv64 2.82.2-3 [141 kB] Get:145 http://localhost:3142/debian unstable/main amd64 native-architecture all 0.2.3 [2108 B] Get:146 http://localhost:3142/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-3 [1501 kB] Get:147 http://localhost:3142/debian unstable/main amd64 libgirepository-2.0-0 amd64 2.82.2-3 [139 kB] Get:148 http://localhost:3142/debian unstable/main amd64 girepository-tools amd64 2.82.2-3 [145 kB] Get:149 http://localhost:3142/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get:150 http://localhost:3142/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get:151 http://localhost:3142/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get:152 http://localhost:3142/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get:153 http://localhost:3142/debian unstable/main amd64 python3-lxml amd64 5.3.0-1+b1 [1676 kB] Get:154 http://localhost:3142/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get:155 http://localhost:3142/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get:156 http://localhost:3142/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get:157 http://localhost:3142/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get:158 http://localhost:3142/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get:159 http://localhost:3142/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get:160 http://localhost:3142/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get:161 http://localhost:3142/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get:162 http://localhost:3142/debian unstable/main amd64 python3-pygments all 2.18.0+dfsg-1 [836 kB] Get:163 http://localhost:3142/debian unstable/main amd64 xsltproc amd64 1.1.35-1.1+b1 [115 kB] Get:164 http://localhost:3142/debian unstable/main amd64 gtk-doc-tools all 1.34.0-1 [328 kB] Get:165 http://localhost:3142/debian unstable/main amd64 help2man amd64 1.49.3 [198 kB] Get:166 http://localhost:3142/debian unstable/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get:167 http://localhost:3142/debian unstable/main amd64 libonig5 amd64 6.9.9-1+b1 [189 kB] Get:168 http://localhost:3142/debian unstable/main amd64 libjq1 amd64 1.7.1-3+b1 [164 kB] Get:169 http://localhost:3142/debian unstable/main amd64 jq amd64 1.7.1-3+b1 [77.8 kB] Get:170 http://localhost:3142/debian unstable/main riscv64 libkrb5support0 riscv64 1.21.3-3 [33.7 kB] Get:171 http://localhost:3142/debian unstable/main riscv64 libk5crypto3 riscv64 1.21.3-3 [102 kB] Get:172 http://localhost:3142/debian unstable/main riscv64 libkeyutils1 riscv64 1.6.3-4 [9124 B] Get:173 http://localhost:3142/debian unstable/main riscv64 libzstd1 riscv64 1.5.6+dfsg-1+b1 [355 kB] Get:174 http://localhost:3142/debian unstable/main riscv64 libssl3t64 riscv64 3.3.2-2 [2060 kB] Get:175 http://localhost:3142/debian unstable/main riscv64 libkrb5-3 riscv64 1.21.3-3 [335 kB] Get:176 http://localhost:3142/debian unstable/main riscv64 libgssapi-krb5-2 riscv64 1.21.3-3 [143 kB] Get:177 http://localhost:3142/debian unstable/main riscv64 libgssrpc4t64 riscv64 1.21.3-3 [61.0 kB] Get:178 http://localhost:3142/debian unstable/main riscv64 libkadm5clnt-mit12 riscv64 1.21.3-3 [41.2 kB] Get:179 http://localhost:3142/debian unstable/main riscv64 libkdb5-10t64 riscv64 1.21.3-3 [43.5 kB] Get:180 http://localhost:3142/debian unstable/main riscv64 libkadm5srv-mit12 riscv64 1.21.3-3 [54.1 kB] Get:181 http://localhost:3142/debian unstable/main riscv64 krb5-multidev riscv64 1.21.3-3 [126 kB] Get:182 http://localhost:3142/debian unstable/main riscv64 libasan8 riscv64 14.2.0-8 [2365 kB] Get:183 http://localhost:3142/debian unstable/main amd64 libbackward-cpp-dev all 1.6-1 [34.3 kB] Get:184 http://localhost:3142/debian unstable/main riscv64 libuuid1 riscv64 2.40.2-11 [38.0 kB] Get:185 http://localhost:3142/debian unstable/main riscv64 uuid-dev riscv64 2.40.2-11 [62.3 kB] Get:186 http://localhost:3142/debian unstable/main riscv64 libblkid-dev riscv64 2.40.2-11 [486 kB] Get:187 http://localhost:3142/debian unstable/main riscv64 libgomp1 riscv64 14.2.0-8 [131 kB] Get:188 http://localhost:3142/debian unstable/main riscv64 libitm1 riscv64 14.2.0-8 [25.8 kB] Get:189 http://localhost:3142/debian unstable/main riscv64 liblsan0 riscv64 14.2.0-8 [1078 kB] Get:190 http://localhost:3142/debian unstable/main riscv64 libtsan2 riscv64 14.2.0-8 [2243 kB] Get:191 http://localhost:3142/debian unstable/main riscv64 libstdc++6 riscv64 14.2.0-8 [708 kB] Get:192 http://localhost:3142/debian unstable/main riscv64 libubsan1 riscv64 14.2.0-8 [980 kB] Get:193 http://localhost:3142/debian unstable/main riscv64 libgcc-14-dev riscv64 14.2.0-8 [5202 kB] Get:194 http://localhost:3142/debian unstable/main riscv64 libstdc++-14-dev riscv64 14.2.0-8 [5233 kB] Get:195 http://localhost:3142/debian unstable/main riscv64 libboost1.83-dev riscv64 1.83.0-3.2+b1 [10.6 MB] Get:196 http://localhost:3142/debian unstable/main riscv64 libboost-program-options1.83.0 riscv64 1.83.0-3.2+b1 [341 kB] Get:197 http://localhost:3142/debian unstable/main riscv64 libboost-program-options1.83-dev riscv64 1.83.0-3.2+b1 [950 kB] Get:198 http://localhost:3142/debian unstable/main riscv64 libboost-program-options-dev riscv64 1.83.0.2+b2 [3604 B] Get:199 http://localhost:3142/debian unstable/main riscv64 libbrotli1 riscv64 1.1.0-2+b6 [353 kB] Get:200 http://localhost:3142/debian unstable/main riscv64 libbrotli-dev riscv64 1.1.0-2+b6 [799 kB] Get:201 http://localhost:3142/debian unstable/main riscv64 libbz2-1.0 riscv64 1.0.8-6 [40.3 kB] Get:202 http://localhost:3142/debian unstable/main riscv64 libbz2-dev riscv64 1.0.8-6 [69.9 kB] Get:203 http://localhost:3142/debian unstable/main riscv64 libexpat1 riscv64 2.6.4-1 [99.3 kB] Get:204 http://localhost:3142/debian unstable/main riscv64 libpng16-16t64 riscv64 1.6.44-2 [284 kB] Get:205 http://localhost:3142/debian unstable/main riscv64 libfreetype6 riscv64 2.13.3+dfsg-1 [467 kB] Get:206 http://localhost:3142/debian unstable/main riscv64 libfontconfig1 riscv64 2.15.0-1.1+b1 [398 kB] Get:207 http://localhost:3142/debian unstable/main riscv64 libpixman-1-0 riscv64 0.44.0-3 [182 kB] Get:208 http://localhost:3142/debian unstable/main riscv64 libxau6 riscv64 1:1.0.11-1 [20.5 kB] Get:209 http://localhost:3142/debian unstable/main riscv64 libxdmcp6 riscv64 1:1.1.5-1 [28.0 kB] Get:210 http://localhost:3142/debian unstable/main riscv64 libxcb1 riscv64 1.17.0-2+b1 [145 kB] Get:211 http://localhost:3142/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get:212 http://localhost:3142/debian unstable/main riscv64 libx11-6 riscv64 2:1.8.10-2 [812 kB] Get:213 http://localhost:3142/debian unstable/main riscv64 libxcb-render0 riscv64 1.17.0-2+b1 [115 kB] Get:214 http://localhost:3142/debian unstable/main riscv64 libxcb-shm0 riscv64 1.17.0-2+b1 [105 kB] Get:215 http://localhost:3142/debian unstable/main riscv64 libxext6 riscv64 2:1.3.4-1+b2 [51.7 kB] Get:216 http://localhost:3142/debian unstable/main riscv64 libxrender1 riscv64 1:0.9.10-1.1+b2 [28.5 kB] Get:217 http://localhost:3142/debian unstable/main riscv64 libcairo2 riscv64 1.18.2-2 [544 kB] Get:218 http://localhost:3142/debian unstable/main riscv64 libcairo-gobject2 riscv64 1.18.2-2 [129 kB] Get:219 http://localhost:3142/debian unstable/main riscv64 liblzo2-2 riscv64 2.10-3+b1 [60.9 kB] Get:220 http://localhost:3142/debian unstable/main riscv64 libcairo-script-interpreter2 riscv64 1.18.2-2 [61.2 kB] Get:221 http://localhost:3142/debian unstable/main riscv64 libexpat1-dev riscv64 2.6.4-1 [286 kB] Get:222 http://localhost:3142/debian unstable/main riscv64 zlib1g-dev riscv64 1:1.3.dfsg+really1.3.1-1+b1 [978 kB] Get:223 http://localhost:3142/debian unstable/main riscv64 libpng-dev riscv64 1.6.44-2 [513 kB] Get:224 http://localhost:3142/debian unstable/main riscv64 libfreetype-dev riscv64 2.13.3+dfsg-1 [1145 kB] Get:225 http://localhost:3142/debian unstable/main riscv64 pkgconf riscv64 1.8.1-4 [26.1 kB] Get:226 http://localhost:3142/debian unstable/main riscv64 libfontconfig-dev riscv64 2.15.0-1.1+b1 [603 kB] Get:227 http://localhost:3142/debian unstable/main riscv64 libffi-dev riscv64 3.4.6-1 [80.2 kB] Get:228 http://localhost:3142/debian unstable/main riscv64 libsepol2 riscv64 3.7-1 [302 kB] Get:229 http://localhost:3142/debian unstable/main riscv64 libsepol-dev riscv64 3.7-1 [987 kB] Get:230 http://localhost:3142/debian unstable/main riscv64 libpcre2-16-0 riscv64 10.44-4 [257 kB] Get:231 http://localhost:3142/debian unstable/main riscv64 libpcre2-32-0 riscv64 10.44-4 [244 kB] Get:232 http://localhost:3142/debian unstable/main riscv64 libpcre2-posix3 riscv64 10.44-4 [60.1 kB] Get:233 http://localhost:3142/debian unstable/main riscv64 libpcre2-dev riscv64 10.44-4 [1776 kB] Get:234 http://localhost:3142/debian unstable/main riscv64 libselinux1-dev riscv64 3.7-3+b1 [277 kB] Get:235 http://localhost:3142/debian unstable/main riscv64 libmount-dev riscv64 2.40.2-11 [28.9 kB] Get:236 http://localhost:3142/debian unstable/main riscv64 libsysprof-capture-4-dev riscv64 47.1-1 [110 kB] Get:237 http://localhost:3142/debian unstable/main riscv64 libgio-2.0-dev riscv64 2.82.2-3 [4035 kB] Get:238 http://localhost:3142/debian unstable/main amd64 libglib2.0-data all 2.82.2-3 [1275 kB] Get:239 http://localhost:3142/debian unstable/main amd64 libglib2.0-bin amd64 2.82.2-3 [127 kB] Get:240 http://localhost:3142/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get:241 http://localhost:3142/debian unstable/main amd64 libgio-2.0-dev-bin amd64 2.82.2-3 [163 kB] Get:242 http://localhost:3142/debian unstable/main amd64 libglib2.0-dev-bin amd64 2.82.2-3 [51.5 kB] Get:243 http://localhost:3142/debian unstable/main riscv64 libglib2.0-dev riscv64 2.82.2-3 [52.3 kB] Get:244 http://localhost:3142/debian unstable/main riscv64 libpixman-1-dev riscv64 0.44.0-3 [11.4 kB] Get:245 http://localhost:3142/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get:246 http://localhost:3142/debian unstable/main riscv64 libice6 riscv64 2:1.1.1-1 [64.8 kB] Get:247 http://localhost:3142/debian unstable/main riscv64 libsm6 riscv64 2:1.2.4-1 [35.2 kB] Get:248 http://localhost:3142/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get:249 http://localhost:3142/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get:250 http://localhost:3142/debian unstable/main amd64 x11proto-core-dev all 2024.1-1 [3312 B] Get:251 http://localhost:3142/debian unstable/main riscv64 libice-dev riscv64 2:1.1.1-1 [130 kB] Get:252 http://localhost:3142/debian unstable/main riscv64 libsm-dev riscv64 2:1.2.4-1 [56.6 kB] Get:253 http://localhost:3142/debian unstable/main riscv64 libxau-dev riscv64 1:1.0.11-1 [27.6 kB] Get:254 http://localhost:3142/debian unstable/main riscv64 libxdmcp-dev riscv64 1:1.1.5-1 [52.9 kB] Get:255 http://localhost:3142/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get:256 http://localhost:3142/debian unstable/main riscv64 libxcb1-dev riscv64 1.17.0-2+b1 [241 kB] Get:257 http://localhost:3142/debian unstable/main riscv64 libx11-dev riscv64 2:1.8.10-2 [1406 kB] Get:258 http://localhost:3142/debian unstable/main riscv64 libxcb-render0-dev riscv64 1.17.0-2+b1 [131 kB] Get:259 http://localhost:3142/debian unstable/main riscv64 libxcb-shm0-dev riscv64 1.17.0-2+b1 [110 kB] Get:260 http://localhost:3142/debian unstable/main riscv64 libxext-dev riscv64 2:1.3.4-1+b2 [147 kB] Get:261 http://localhost:3142/debian unstable/main riscv64 libxrender-dev riscv64 1:0.9.10-1.1+b2 [59.0 kB] Get:262 http://localhost:3142/debian unstable/main riscv64 libcairo2-dev riscv64 1.18.2-2 [43.0 kB] Get:263 http://localhost:3142/debian unstable/main riscv64 libgmp10 riscv64 2:6.3.0+dfsg-2+b2 [558 kB] Get:264 http://localhost:3142/debian unstable/main riscv64 libnettle8t64 riscv64 3.10-1+b1 [334 kB] Get:265 http://localhost:3142/debian unstable/main riscv64 libhogweed6t64 riscv64 3.10-1+b1 [335 kB] Get:266 http://localhost:3142/debian unstable/main riscv64 libunistring5 riscv64 1.2-1+b1 [428 kB] Get:267 http://localhost:3142/debian unstable/main riscv64 libidn2-0 riscv64 2.3.7-2+b1 [129 kB] Get:268 http://localhost:3142/debian unstable/main riscv64 libp11-kit0 riscv64 0.25.5-2+b1 [445 kB] Get:269 http://localhost:3142/debian unstable/main riscv64 libtasn1-6 riscv64 4.19.0-3+b3 [50.1 kB] Get:270 http://localhost:3142/debian unstable/main riscv64 libgnutls30t64 riscv64 3.8.8-2 [1435 kB] Get:271 http://localhost:3142/debian unstable/main riscv64 libdb5.3t64 riscv64 5.3.28+dfsg2-9 [716 kB] Get:272 http://localhost:3142/debian unstable/main riscv64 libsasl2-modules-db riscv64 2.1.28+dfsg1-8 [20.3 kB] Get:273 http://localhost:3142/debian unstable/main riscv64 libsasl2-2 riscv64 2.1.28+dfsg1-8 [60.7 kB] Get:274 http://localhost:3142/debian unstable/main riscv64 libldap-2.5-0 riscv64 2.5.18+dfsg-3+b1 [191 kB] Get:275 http://localhost:3142/debian unstable/main riscv64 libnghttp2-14 riscv64 1.64.0-1 [77.0 kB] Get:276 http://localhost:3142/debian unstable/main riscv64 libnghttp3-9 riscv64 1.4.0-1+b1 [64.1 kB] Get:277 http://localhost:3142/debian unstable/main riscv64 libngtcp2-16 riscv64 1.6.0-1 [127 kB] Get:278 http://localhost:3142/debian unstable/main riscv64 libngtcp2-crypto-gnutls8 riscv64 1.6.0-1 [19.9 kB] Get:279 http://localhost:3142/debian unstable/main riscv64 libpsl5t64 riscv64 0.21.2-1.1+b1 [57.3 kB] Get:280 http://localhost:3142/debian unstable/main riscv64 librtmp1 riscv64 2.4+20151223.gitfa8646d.1-2+b5 [59.0 kB] Get:281 http://localhost:3142/debian unstable/main riscv64 libssh2-1t64 riscv64 1.11.1-1 [249 kB] Get:282 http://localhost:3142/debian unstable/main riscv64 libcurl3t64-gnutls riscv64 8.11.0-1 [367 kB] Get:283 http://localhost:3142/debian unstable/main riscv64 libevent-2.1-7t64 riscv64 2.1.12-stable-10+b1 [182 kB] Get:284 http://localhost:3142/debian unstable/main riscv64 libunbound8 riscv64 1.22.0-1 [605 kB] Get:285 http://localhost:3142/debian unstable/main riscv64 libgnutls-dane0t64 riscv64 3.8.8-2 [447 kB] Get:286 http://localhost:3142/debian unstable/main riscv64 libgnutls-openssl27t64 riscv64 3.8.8-2 [446 kB] Get:287 http://localhost:3142/debian unstable/main riscv64 libidn2-dev riscv64 2.3.7-2+b1 [155 kB] Get:288 http://localhost:3142/debian unstable/main riscv64 libp11-kit-dev riscv64 0.25.5-2+b1 [208 kB] Get:289 http://localhost:3142/debian unstable/main riscv64 libtasn1-6-dev riscv64 4.19.0-3+b3 [148 kB] Get:290 http://localhost:3142/debian unstable/main riscv64 libgmpxx4ldbl riscv64 2:6.3.0+dfsg-2+b2 [329 kB] Get:291 http://localhost:3142/debian unstable/main riscv64 libgmp-dev riscv64 2:6.3.0+dfsg-2+b2 [1024 kB] Get:292 http://localhost:3142/debian unstable/main riscv64 nettle-dev riscv64 3.10-1+b1 [1522 kB] Get:293 http://localhost:3142/debian unstable/main riscv64 libgnutls28-dev riscv64 3.8.8-2 [2587 kB] Get:294 http://localhost:3142/debian unstable/main riscv64 libkrb5-dev riscv64 1.21.3-3 [15.8 kB] Get:295 http://localhost:3142/debian unstable/main riscv64 libldap-dev riscv64 2.5.18+dfsg-3+b1 [572 kB] Get:296 http://localhost:3142/debian unstable/main riscv64 libnghttp2-dev riscv64 1.64.0-1 [219 kB] Get:297 http://localhost:3142/debian unstable/main riscv64 libnghttp3-dev riscv64 1.4.0-1+b1 [171 kB] Get:298 http://localhost:3142/debian unstable/main riscv64 libngtcp2-crypto-gnutls-dev riscv64 1.6.0-1 [36.7 kB] Get:299 http://localhost:3142/debian unstable/main riscv64 libngtcp2-dev riscv64 1.6.0-1 [360 kB] Get:300 http://localhost:3142/debian unstable/main riscv64 libpsl-dev riscv64 0.21.2-1.1+b1 [87.2 kB] Get:301 http://localhost:3142/debian unstable/main riscv64 librtmp-dev riscv64 2.4+20151223.gitfa8646d.1-2+b5 [118 kB] Get:302 http://localhost:3142/debian unstable/main riscv64 libssl-dev riscv64 3.3.2-2 [5298 kB] Get:303 http://localhost:3142/debian unstable/main riscv64 libssh2-1-dev riscv64 1.11.1-1 [560 kB] Get:304 http://localhost:3142/debian unstable/main riscv64 libzstd-dev riscv64 1.5.6+dfsg-1+b1 [1377 kB] Get:305 http://localhost:3142/debian unstable/main riscv64 libcurl4-gnutls-dev riscv64 8.11.0-1 [1069 kB] Get:306 http://localhost:3142/debian unstable/main riscv64 libdeflate0 riscv64 1.22-1 [38.6 kB] Get:307 http://localhost:3142/debian unstable/main riscv64 libdeflate-dev riscv64 1.22-1 [79.7 kB] Get:308 http://localhost:3142/debian unstable/main riscv64 libdisorder0 riscv64 0.0.2+git20130809.8062ee1-4+b2 [4716 B] Get:309 http://localhost:3142/debian unstable/main riscv64 libdisorder-dev riscv64 0.0.2+git20130809.8062ee1-4+b2 [5580 B] Get:310 http://localhost:3142/debian unstable/main riscv64 libdivsufsort3 riscv64 2.0.1-6+b1 [40.7 kB] Get:311 http://localhost:3142/debian unstable/main riscv64 libdivsufsort-dev riscv64 2.0.1-6+b1 [19.1 kB] Get:312 http://localhost:3142/debian unstable/main riscv64 libelf1t64 riscv64 0.192-4 [194 kB] Get:313 http://localhost:3142/debian unstable/main riscv64 libelf-dev riscv64 0.192-4 [188 kB] Get:314 http://localhost:3142/debian unstable/main riscv64 liblzma5 riscv64 5.6.3-1+b1 [277 kB] Get:315 http://localhost:3142/debian unstable/main riscv64 libdw1t64 riscv64 0.192-4 [268 kB] Get:316 http://localhost:3142/debian unstable/main riscv64 liblzma-dev riscv64 5.6.3-1+b1 [443 kB] Get:317 http://localhost:3142/debian unstable/main riscv64 libdw-dev riscv64 0.192-4 [835 kB] Get:318 http://localhost:3142/debian unstable/main riscv64 libfastahack0 riscv64 1.0.0+dfsg-11+b2 [24.5 kB] Get:319 http://localhost:3142/debian unstable/main riscv64 libfastahack-dev riscv64 1.0.0+dfsg-11+b2 [80.1 kB] Get:320 http://localhost:3142/debian unstable/main riscv64 libfml0 riscv64 0.1+git20190320.b499514-1+b2 [76.3 kB] Get:321 http://localhost:3142/debian unstable/main riscv64 libfml-dev riscv64 0.1+git20190320.b499514-1+b2 [178 kB] Get:322 http://localhost:3142/debian unstable/main riscv64 libgpg-error0 riscv64 1.50-4 [82.6 kB] Get:323 http://localhost:3142/debian unstable/main riscv64 libgcrypt20 riscv64 1.11.0-6 [826 kB] Get:324 http://localhost:3142/debian unstable/main riscv64 libhtscodecs2 riscv64 1.6.1-1 [74.6 kB] Get:325 http://localhost:3142/debian unstable/main riscv64 libhts3t64 riscv64 1.20+ds-2 [464 kB] Get:326 http://localhost:3142/debian unstable/main riscv64 libhts-dev riscv64 1.20+ds-2 [3080 kB] Get:327 http://localhost:3142/debian unstable/main riscv64 libicu72 riscv64 72.1-5+b1 [9391 kB] Get:328 http://localhost:3142/debian unstable/main riscv64 libicu-dev riscv64 72.1-5+b1 [14.4 MB] Get:329 http://localhost:3142/debian unstable/main riscv64 libjansson4 riscv64 2.14-2+b3 [40.7 kB] Get:330 http://localhost:3142/debian unstable/main riscv64 libjansson-dev riscv64 2.14-2+b3 [87.6 kB] Get:331 http://localhost:3142/debian unstable/main riscv64 libjemalloc2 riscv64 5.3.0-2+b2 [255 kB] Get:332 http://localhost:3142/debian unstable/main riscv64 libjemalloc-dev riscv64 5.3.0-2+b2 [1747 kB] Get:333 http://localhost:3142/debian unstable/main riscv64 libltdl7 riscv64 2.4.7-8 [393 kB] Get:334 http://localhost:3142/debian unstable/main riscv64 libxxhash0 riscv64 0.8.2-2+b2 [39.9 kB] Get:335 http://localhost:3142/debian unstable/main riscv64 liblz4-1 riscv64 1.9.4-3+b1 [78.6 kB] Get:336 http://localhost:3142/debian unstable/main riscv64 liblz4-dev riscv64 1.9.4-3+b1 [273 kB] Get:337 http://localhost:3142/debian unstable/main riscv64 libmhash2 riscv64 0.9.9.9-10 [112 kB] Get:338 http://localhost:3142/debian unstable/main riscv64 libtinfo6 riscv64 6.5-2+b1 [343 kB] Get:339 http://localhost:3142/debian unstable/main riscv64 libncurses6 riscv64 6.5-2+b1 [105 kB] Get:340 http://localhost:3142/debian unstable/main riscv64 libncursesw6 riscv64 6.5-2+b1 [140 kB] Get:341 http://localhost:3142/debian unstable/main riscv64 libncurses-dev riscv64 6.5-2+b1 [835 kB] Get:342 http://localhost:3142/debian unstable/main riscv64 libprotobuf32t64 riscv64 3.21.12-10+b1 [980 kB] Get:343 http://localhost:3142/debian unstable/main riscv64 libprotobuf-lite32t64 riscv64 3.21.12-10+b1 [281 kB] Get:344 http://localhost:3142/debian unstable/main riscv64 libprotobuf-dev riscv64 3.21.12-10+b1 [5308 kB] Get:345 http://localhost:3142/debian unstable/main amd64 libprotobuf32t64 amd64 3.21.12-10+b1 [982 kB] Get:346 http://localhost:3142/debian unstable/main riscv64 libprotoc32t64 riscv64 3.21.12-10+b1 [875 kB] Get:347 http://localhost:3142/debian unstable/main riscv64 libprotoc-dev riscv64 3.21.12-10+b1 [4644 kB] Get:348 http://localhost:3142/debian unstable/main amd64 libprotoc32t64 amd64 3.21.12-10+b1 [920 kB] Get:349 http://localhost:3142/debian unstable/main riscv64 libxml2 riscv64 2.12.7+dfsg+really2.9.14-0.2+b1 [709 kB] Get:350 http://localhost:3142/debian unstable/main riscv64 libxslt1.1 riscv64 1.1.35-1.1+b1 [235 kB] Get:351 http://localhost:3142/debian unstable/main riscv64 libyajl2 riscv64 2.1.0-5+b2 [23.6 kB] Get:352 http://localhost:3142/debian unstable/main riscv64 libraptor2-0 riscv64 2.0.16-4+b1 [175 kB] Get:353 http://localhost:3142/debian unstable/main riscv64 libxml2-dev riscv64 2.12.7+dfsg+really2.9.14-0.2+b1 [1951 kB] Get:354 http://localhost:3142/debian unstable/main riscv64 libxslt1-dev riscv64 1.1.35-1.1+b1 [345 kB] Get:355 http://localhost:3142/debian unstable/main riscv64 libyajl-dev riscv64 2.1.0-5+b2 [55.6 kB] Get:356 http://localhost:3142/debian unstable/main riscv64 libraptor2-dev riscv64 2.0.16-4+b1 [448 kB] Get:357 http://localhost:3142/debian unstable/main riscv64 librasqal3t64 riscv64 0.9.33-2.1+b2 [191 kB] Get:358 http://localhost:3142/debian unstable/main riscv64 librasqal3-dev riscv64 0.9.33-2.1+b2 [524 kB] Get:359 http://localhost:3142/debian unstable/main riscv64 librdf0t64 riscv64 1.0.17-4+b1 [108 kB] Get:360 http://localhost:3142/debian unstable/main riscv64 librdf0-dev riscv64 1.0.17-4+b1 [372 kB] Get:361 http://localhost:3142/debian unstable/main amd64 libsimde-dev all 0.8.2-1 [465 kB] Get:362 http://localhost:3142/debian unstable/main riscv64 libsmithwaterman0 riscv64 0.0+git20160702.2610e25-12+b2 [34.4 kB] Get:363 http://localhost:3142/debian unstable/main riscv64 libsmithwaterman-dev riscv64 0.0+git20160702.2610e25-12+b2 [121 kB] Get:364 http://localhost:3142/debian unstable/main amd64 libsparsehash-dev all 2.0.3-2 [76.8 kB] Get:365 http://localhost:3142/debian unstable/main riscv64 libssw0 riscv64 1.1-15+b1 [25.9 kB] Get:366 http://localhost:3142/debian unstable/main riscv64 libssw-dev riscv64 1.1-15+b1 [60.9 kB] Get:367 http://localhost:3142/debian unstable/main riscv64 libtabixpp0t64 riscv64 1.1.2-2.1+b1 [9376 B] Get:368 http://localhost:3142/debian unstable/main riscv64 libtabixpp-dev riscv64 1.1.2-2.1+b1 [18.8 kB] Get:369 http://localhost:3142/debian unstable/main amd64 libtsl-hopscotch-map-dev all 2.3.1-1 [36.6 kB] Get:370 http://localhost:3142/debian unstable/main riscv64 libwfa2-0 riscv64 2.3.3-4+b1 [60.7 kB] Get:371 http://localhost:3142/debian unstable/main riscv64 libvcflib2 riscv64 1.0.9+dfsg1-3+b2 [182 kB] Get:372 http://localhost:3142/debian unstable/main riscv64 libwfa2-dev riscv64 2.3.3-4+b1 [157 kB] Get:373 http://localhost:3142/debian unstable/main riscv64 libvcflib-dev riscv64 1.0.9+dfsg1-3+b2 [77.9 kB] Get:374 http://localhost:3142/debian unstable/main amd64 protobuf-compiler amd64 3.21.12-10+b1 [84.8 kB] Get:375 http://localhost:3142/debian unstable/main amd64 rapidjson-dev all 1.1.0+dfsg2-7.3 [98.0 kB] Get:376 http://localhost:3142/debian unstable/main amd64 rs amd64 20200313-1 [15.5 kB] Get:377 http://localhost:3142/debian unstable/main amd64 unzip amd64 6.0-28 [166 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 346 MB in 7s (47.3 MB/s) Selecting previously unselected package m4. (Reading database ... 13028 files and directories currently installed.) Preparing to unpack .../archives/m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package flex. Preparing to unpack .../flex_2.6.4-8.2+b3_amd64.deb ... Unpacking flex (2.6.4-8.2+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../libsigsegv2_2.14-1+b2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.14-1+b2) ... Setting up readline-common (8.2-5) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libsigsegv2:amd64 (2.14-1+b2) ... Selecting previously unselected package gawk. 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Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up procps (2:4.0.4-6) ... Setting up linux-libc-dev-riscv64-cross (6.11.2-1cross1) ... Setting up bison (2:3.8.2+dfsg-1+b2) ... update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up netbase (6.4) ... Setting up libngtcp2-16:amd64 (1.6.0-1) ... Setting up libc6-riscv64-cross (2.40-3cross1) ... Setting up sgml-base (1.31) ... Setting up cmake-data (3.31.1-1) ... Setting up librhash1:amd64 (1.4.5-1) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libgomp1-riscv64-cross (14.2.0-6cross1) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up libprotoc32t64:amd64 (3.21.12-10+b1) ... Setting up libatomic1-riscv64-cross (14.2.0-6cross1) ... Setting up libjson-c5:amd64 (0.18+ds-1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libonig5:amd64 (6.9.9-1+b1) ... Setting up liblocale-gettext-perl (1.07-7+b1) ... Setting up libngtcp2-crypto-gnutls8:amd64 (1.6.0-1) ... Setting up rs (20200313-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up x11proto-dev (2024.1-1) ... Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up flex (2.6.4-8.2+b3) ... Setting up gettext (0.22.5-2) ... Setting up protobuf-compiler (3.21.12-10+b1) ... Setting up libtool (2.4.7-8) ... Setting up libgirepository-2.0-0:amd64 (2.82.2-3) ... Setting up libjq1:amd64 (1.7.1-3+b1) ... Setting up fontconfig-config (2.15.0-1.1+b1) ... Setting up libglib2.0-bin (2.82.2-3) ... Setting up libitm1-riscv64-cross (14.2.0-6cross1) ... Setting up cpp-14-riscv64-linux-gnu (14.2.0-6cross1) ... Setting up opensp (1.5.2-15) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Setting up pkgconf:amd64 (1.8.1-4) ... Setting up pkgconf:riscv64 (1.8.1-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libgcc-s1-riscv64-cross (14.2.0-6cross1) ... Setting up x11proto-core-dev (2024.1-1) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libc6-dev-riscv64-cross (2.40-3cross1) ... Setting up xml-core (0.19) ... Setting up jq (1.7.1-3+b1) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libasan8-riscv64-cross (14.2.0-6cross1) ... Setting up cpp-riscv64-linux-gnu (4:14.2.0-1) ... Setting up libarchive13t64:amd64 (3.7.4-1.1) ... Setting up libstdc++6-riscv64-cross (14.2.0-6cross1) ... Setting up girepository-tools:amd64 (2.82.2-3) ... Setting up libdebuginfod-common (0.192-4) ... Setting up libcurl4t64:amd64 (8.11.0-1) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up libubsan1-riscv64-cross (14.2.0-6cross1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up xsltproc (1.1.35-1.1+b1) ... Setting up libcurl3t64-gnutls:amd64 (8.11.0-1) ... Setting up liblsan0-riscv64-cross (14.2.0-6cross1) ... Setting up libtsan2-riscv64-cross (14.2.0-6cross1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up cmake (3.31.1-1) ... Setting up libdebuginfod1t64:amd64 (0.192-4) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-3) ... Setting up libgcc-14-dev-riscv64-cross (14.2.0-6cross1) ... Setting up python3.12 (3.12.7-3) ... Setting up libstdc++-14-dev-riscv64-cross (14.2.0-6cross1) ... Setting up debhelper (13.20) ... Setting up gcc-14-riscv64-linux-gnu (14.2.0-6cross1) ... Setting up libpython3-stdlib:amd64 (3.12.7-1) ... Setting up elfutils (0.192-4) ... Setting up g++-14-riscv64-linux-gnu (14.2.0-6cross1) ... Setting up python3 (3.12.7-1) ... /usr/share/gtk-doc/python/gtkdoc/scan.py:44: SyntaxWarning: invalid escape sequence '\s' VAR_TYPE_MODIFIER = '(?:' + '|'.join([t + '\s+' for t in TYPE_MODIFIERS]) + ')*' /usr/share/gtk-doc/python/gtkdoc/scan.py:45: SyntaxWarning: invalid escape sequence '\s' RET_TYPE_MODIFIER = '(?:' + '|'.join([t + '\s+' for t in TYPE_MODIFIERS + ['G_CONST_RETURN']]) + ')*' /usr/share/gtk-doc/python/gtkdoc/scan.py:238: SyntaxWarning: invalid escape sequence '\(' ignore_decorators = '|' + options.ignore_decorators.replace('()', '\(\w*\)') /usr/share/gtk-doc/python/gtkdoc/scan.py:239: SyntaxWarning: invalid escape sequence '\s' optional_decorators_regex = '(?:\s+(?:%s))?' % ignore_decorators[1:] /usr/share/gtk-doc/python/gtkdoc/scan.py:487: SyntaxWarning: invalid escape sequence '\(' ignore_decorators = '|' + options.ignore_decorators.replace('()', '\(\w*\)') /usr/share/gtk-doc/python/gtkdoc/scan.py:488: SyntaxWarning: invalid escape sequence '\s' optional_decorators_regex = '(?:\s+(?:%s))?' % ignore_decorators[1:] Setting up python3-autocommand (2.2.2-3) ... Setting up gcc-riscv64-linux-gnu (4:14.2.0-1) ... Setting up g++-riscv64-linux-gnu (4:14.2.0-1) ... Setting up python3-packaging (24.2-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-lxml:amd64 (5.3.0-1+b1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up libgio-2.0-dev-bin (2.82.2-3) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up crossbuild-essential-riscv64 (12.12) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up libglib2.0-dev-bin (2.82.2-3) ... Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up libgcc-s1:riscv64 (14.2.0-8) ... Setting up libc6:riscv64 (2.40-4) ... Setting up libnghttp3-9:riscv64 (1.4.0-1+b1) ... Setting up libmhash2:riscv64 (0.9.9.9-10) ... Setting up libnghttp3-dev:riscv64 (1.4.0-1+b1) ... Setting up libdb5.3t64:riscv64 (5.3.28+dfsg2-9) ... Setting up libffi8:riscv64 (3.4.6-1) ... Setting up libasan8:riscv64 (14.2.0-8) ... Setting up libxxhash0:riscv64 (0.8.2-2+b2) ... Setting up libtasn1-6:riscv64 (4.19.0-3+b3) ... Setting up libngtcp2-16:riscv64 (1.6.0-1) ... Setting up libtsan2:riscv64 (14.2.0-8) ... Setting up libbz2-1.0:riscv64 (1.0.8-6) ... Setting up libdivsufsort3:riscv64 (2.0.1-6+b1) ... Setting up libtasn1-6-dev:riscv64 (4.19.0-3+b3) ... Setting up libblkid1:riscv64 (2.40.2-11) ... Setting up libstdc++6:riscv64 (14.2.0-8) ... Setting up liblsan0:riscv64 (14.2.0-8) ... Setting up libitm1:riscv64 (14.2.0-8) ... Setting up libtinfo6:riscv64 (6.5-2+b1) ... Setting up libdivsufsort-dev:riscv64 (2.0.1-6+b1) ... Setting up libhtscodecs2:riscv64 (1.6.1-1) ... Setting up libprotobuf-lite32t64:riscv64 (3.21.12-10+b1) ... Setting up libexpat1:riscv64 (2.6.4-1) ... Setting up libdisorder0:riscv64 (0.0.2+git20130809.8062ee1-4+b2) ... Setting up libboost-program-options1.83.0:riscv64 (1.83.0-3.2+b1) ... Setting up libpixman-1-0:riscv64 (0.44.0-3) ... Setting up libwfa2-0:riscv64 (2.3.3-4+b1) ... Setting up libzstd1:riscv64 (1.5.6+dfsg-1+b1) ... Setting up libice6:riscv64 (2:1.1.1-1) ... Setting up libxau6:riscv64 (1:1.0.11-1) ... Setting up libxdmcp6:riscv64 (1:1.1.5-1) ... Setting up libkeyutils1:riscv64 (1.6.3-4) ... Setting up libxcb1:riscv64 (1.17.0-2+b1) ... Setting up libpixman-1-dev:riscv64 (0.44.0-3) ... Setting up libicu72:riscv64 (72.1-5+b1) ... Setting up libzstd-dev:riscv64 (1.5.6+dfsg-1+b1) ... Setting up libxau-dev:riscv64 (1:1.0.11-1) ... Setting up liblzma5:riscv64 (5.6.3-1+b1) ... Setting up libgpg-error0:riscv64 (1.50-4) ... Setting up libice-dev:riscv64 (2:1.1.1-1) ... Setting up libxcb-render0:riscv64 (1.17.0-2+b1) ... Setting up liblz4-1:riscv64 (1.9.4-3+b1) ... Setting up libbrotli1:riscv64 (1.1.0-2+b6) ... Setting up libyajl2:riscv64 (2.1.0-5+b2) ... Setting up libsmithwaterman0:riscv64 (0.0+git20160702.2610e25-12+b2) ... Setting up libnghttp2-14:riscv64 (1.64.0-1) ... Setting up libdeflate0:riscv64 (1.22-1) ... Setting up libevent-2.1-7t64:riscv64 (2.1.12-stable-10+b1) ... Setting up libgcrypt20:riscv64 (1.11.0-6) ... Setting up libwfa2-dev:riscv64 (2.3.3-4+b1) ... Setting up liblzo2-2:riscv64 (2.10-3+b1) ... Setting up zlib1g:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libcrypt1:riscv64 (1:4.4.36-5) ... Setting up libxcb-shm0:riscv64 (1.17.0-2+b1) ... Setting up libcom-err2:riscv64 (1.47.1-1+b1) ... Setting up libjemalloc2:riscv64 (5.3.0-2+b2) ... Setting up libngtcp2-dev:riscv64 (1.6.0-1) ... Setting up libgomp1:riscv64 (14.2.0-8) ... Setting up libffi-dev:riscv64 (3.4.6-1) ... Setting up libfml0:riscv64 (0.1+git20190320.b499514-1+b2) ... Setting up libfastahack0:riscv64 (1.0.0+dfsg-11+b2) ... Setting up libpcre2-16-0:riscv64 (10.44-4) ... Setting up libelf1t64:riscv64 (0.192-4) ... Setting up libjansson4:riscv64 (2.14-2+b3) ... Setting up libkrb5support0:riscv64 (1.21.3-3) ... Setting up libdw1t64:riscv64 (0.192-4) ... Setting up libsasl2-modules-db:riscv64 (2.1.28+dfsg1-8) ... Setting up libfastahack-dev:riscv64 (1.0.0+dfsg-11+b2) ... Setting up libjemalloc-dev:riscv64 (5.3.0-2+b2) ... Setting up libxdmcp-dev:riscv64 (1:1.1.5-1) ... Setting up libnettle8t64:riscv64 (3.10-1+b1) ... Setting up libpcre2-32-0:riscv64 (10.44-4) ... Setting up libgmp10:riscv64 (2:6.3.0+dfsg-2+b2) ... Setting up libncurses6:riscv64 (6.5-2+b1) ... Setting up libp11-kit0:riscv64 (0.25.5-2+b1) ... Setting up libunistring5:riscv64 (1.2-1+b1) ... Setting up libpng16-16t64:riscv64 (1.6.44-2) ... Setting up libatomic1:riscv64 (14.2.0-8) ... Setting up libuuid1:riscv64 (2.40.2-11) ... Setting up liblz4-dev:riscv64 (1.9.4-3+b1) ... Setting up libsepol2:riscv64 (3.7-1) ... Setting up libsepol-dev:riscv64 (3.7-1) ... Setting up libpcre2-8-0:riscv64 (10.44-4) ... Setting up cross-exe-wrapper:riscv64 (0.2.3) ... Setting up libncursesw6:riscv64 (6.5-2+b1) ... Setting up libk5crypto3:riscv64 (1.21.3-3) ... Setting up libdisorder-dev:riscv64 (0.0.2+git20130809.8062ee1-4+b2) ... Setting up libltdl7:riscv64 (2.4.7-8) ... Setting up libyajl-dev:riscv64 (2.1.0-5+b2) ... Setting up liblzma-dev:riscv64 (5.6.3-1+b1) ... Setting up libubsan1:riscv64 (14.2.0-8) ... Setting up libpcre2-posix3:riscv64 (10.44-4) ... Setting up libhogweed6t64:riscv64 (3.10-1+b1) ... Setting up libcrypt-dev:riscv64 (1:4.4.36-5) ... Setting up libc6-dev:riscv64 (2.40-4) ... Setting up libx11-6:riscv64 (2:1.8.10-2) ... Setting up libgcc-14-dev:riscv64 (14.2.0-8) ... Setting up libdeflate-dev:riscv64 (1.22-1) ... Setting up libstdc++-14-dev:riscv64 (14.2.0-8) ... Setting up libsm6:riscv64 (2:1.2.4-1) ... Setting up libssw0:riscv64 (1.1-15+b1) ... Setting up libicu-dev:riscv64 (72.1-5+b1) ... Setting up libxml2:riscv64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libjansson-dev:riscv64 (2.14-2+b3) ... Setting up libbrotli-dev:riscv64 (1.1.0-2+b6) ... Setting up libp11-kit-dev:riscv64 (0.25.5-2+b1) ... Setting up libbz2-dev:riscv64 (1.0.8-6) ... Setting up libnghttp2-dev:riscv64 (1.64.0-1) ... Setting up libprotobuf32t64:riscv64 (3.21.12-10+b1) ... Setting up libboost1.83-dev:riscv64 (1.83.0-3.2+b1) ... Setting up libncurses-dev:riscv64 (6.5-2+b1) ... Setting up libxcb1-dev:riscv64 (1.17.0-2+b1) ... Setting up libpcre2-dev:riscv64 (10.44-4) ... Setting up libxrender1:riscv64 (1:0.9.10-1.1+b2) ... Setting up libssw-dev:riscv64 (1.1-15+b1) ... Setting up libssl3t64:riscv64 (3.3.2-2) ... Setting up libboost-program-options1.83-dev:riscv64 (1.83.0-3.2+b1) ... Setting up libx11-dev:riscv64 (2:1.8.10-2) ... Setting up libxext6:riscv64 (2:1.3.4-1+b2) ... Setting up libidn2-0:riscv64 (2.3.7-2+b1) ... Setting up libselinux1:riscv64 (3.7-3+b1) ... Setting up libxcb-shm0-dev:riscv64 (1.17.0-2+b1) ... Setting up libxml2-dev:riscv64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libunbound8:riscv64 (1.22.0-1) ... Setting up libgmpxx4ldbl:riscv64 (2:6.3.0+dfsg-2+b2) ... Setting up libexpat1-dev:riscv64 (2.6.4-1) ... Setting up libfreetype6:riscv64 (2.13.3+dfsg-1) ... Setting up libboost-program-options-dev:riscv64 (1.83.0.2+b2) ... Setting up uuid-dev:riscv64 (2.40.2-11) ... Setting up comerr-dev:riscv64 (2.1-1.47.1-1+b1) ... Setting up libssl-dev:riscv64 (3.3.2-2) ... Setting up libsmithwaterman-dev:riscv64 (0.0+git20160702.2610e25-12+b2) ... Setting up libxcb-render0-dev:riscv64 (1.17.0-2+b1) ... Setting up libidn2-dev:riscv64 (2.3.7-2+b1) ... Setting up libsasl2-2:riscv64 (2.1.28+dfsg1-8) ... Setting up libxext-dev:riscv64 (2:1.3.4-1+b2) ... Setting up zlib1g-dev:riscv64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libmount1:riscv64 (2.40.2-11) ... Setting up libxslt1.1:riscv64 (1.1.35-1.1+b1) ... Setting up libkrb5-3:riscv64 (1.21.3-3) ... Setting up libfontconfig1:riscv64 (2.15.0-1.1+b1) ... Setting up libssh2-1t64:riscv64 (1.11.1-1) ... Setting up libprotoc32t64:riscv64 (3.21.12-10+b1) ... Setting up libxrender-dev:riscv64 (1:0.9.10-1.1+b2) ... Setting up libgnutls30t64:riscv64 (3.8.8-2) ... Setting up libgnutls-openssl27t64:riscv64 (3.8.8-2) ... Setting up libblkid-dev:riscv64 (2.40.2-11) ... Setting up libfml-dev:riscv64 (0.1+git20190320.b499514-1+b2) ... Setting up libgmp-dev:riscv64 (2:6.3.0+dfsg-2+b2) ... Setting up libxslt1-dev:riscv64 (1.1.35-1.1+b1) ... Setting up nettle-dev:riscv64 (3.10-1+b1) ... Setting up libsm-dev:riscv64 (2:1.2.4-1) ... Setting up libselinux1-dev:riscv64 (3.7-3+b1) ... Setting up libpng-dev:riscv64 (1.6.44-2) ... Setting up libpsl5t64:riscv64 (0.21.2-1.1+b1) ... Setting up libcairo2:riscv64 (1.18.2-2) ... Setting up libldap-2.5-0:riscv64 (2.5.18+dfsg-3+b1) ... Setting up libpsl-dev:riscv64 (0.21.2-1.1+b1) ... Setting up libfreetype-dev:riscv64 (2.13.3+dfsg-1) ... Setting up libprotobuf-dev:riscv64 (3.21.12-10+b1) ... Setting up libglib2.0-0t64:riscv64 (2.82.2-3) ... /var/lib/dpkg/info/libglib2.0-0t64:riscv64.postinst: 37: /usr/lib/riscv64-linux-gnu/glib-2.0/glib-compile-schemas: Exec format error /var/lib/dpkg/info/libglib2.0-0t64:riscv64.postinst: 38: /usr/lib/riscv64-linux-gnu/glib-2.0/gio-querymodules: Exec format error Setting up libgnutls-dane0t64:riscv64 (3.8.8-2) ... Setting up librtmp1:riscv64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libldap-dev:riscv64 (2.5.18+dfsg-3+b1) ... Setting up libgssapi-krb5-2:riscv64 (1.21.3-3) ... Setting up libelf-dev:riscv64 (0.192-4) ... Setting up libssh2-1-dev:riscv64 (1.11.1-1) ... Setting up libprotoc-dev:riscv64 (3.21.12-10+b1) ... Setting up libcairo-gobject2:riscv64 (1.18.2-2) ... Setting up libmount-dev:riscv64 (2.40.2-11) ... Setting up libngtcp2-crypto-gnutls8:riscv64 (1.6.0-1) ... Setting up libgnutls28-dev:riscv64 (3.8.8-2) ... Setting up libcairo-script-interpreter2:riscv64 (1.18.2-2) ... Setting up libgio-2.0-dev:riscv64 (2.82.2-3) ... Setting up libgirepository-2.0-0:riscv64 (2.82.2-3) ... Setting up libfontconfig-dev:riscv64 (2.15.0-1.1+b1) ... Setting up libcurl3t64-gnutls:riscv64 (8.11.0-1) ... Setting up libngtcp2-crypto-gnutls-dev:riscv64 (1.6.0-1) ... Setting up libdw-dev:riscv64 (0.192-4) ... Setting up libgssrpc4t64:riscv64 (1.21.3-3) ... Setting up librtmp-dev:riscv64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libhts3t64:riscv64 (1.20+ds-2) ... Setting up libkadm5clnt-mit12:riscv64 (1.21.3-3) ... Setting up girepository-tools:riscv64 (2.82.2-3) ... Setting up libkdb5-10t64:riscv64 (1.21.3-3) ... Setting up libraptor2-0:riscv64 (2.0.16-4+b1) ... Setting up librasqal3t64:riscv64 (0.9.33-2.1+b2) ... Setting up librdf0t64:riscv64 (1.0.17-4+b1) ... Setting up libglib2.0-dev:riscv64 (2.82.2-3) ... Setting up libkadm5srv-mit12:riscv64 (1.21.3-3) ... Setting up libtabixpp0t64:riscv64 (1.1.2-2.1+b1) ... Setting up libcairo2-dev:riscv64 (1.18.2-2) ... Setting up krb5-multidev:riscv64 (1.21.3-3) ... Setting up libkrb5-dev:riscv64 (1.21.3-3) ... Setting up libvcflib2:riscv64 (1.0.9+dfsg1-3+b2) ... Setting up libcurl4-gnutls-dev:riscv64 (8.11.0-1) ... Setting up libraptor2-dev:riscv64 (2.0.16-4+b1) ... Setting up libhts-dev:riscv64 (1.20+ds-2) ... Setting up librasqal3-dev:riscv64 (0.9.33-2.1+b2) ... Setting up librdf0-dev:riscv64 (1.0.17-4+b1) ... Setting up libtabixpp-dev:riscv64 (1.1.2-2.1+b1) ... Setting up libvcflib-dev:riscv64 (1.0.9+dfsg1-3+b2) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xsl (1.79.2+dfsg-7) ... Setting up sgml-data (2.0.11+nmu1) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-xml (4.5-13) ... Setting up docbook (4.5-11) ... Processing triggers for sgml-base (1.31) ... Setting up docbook-to-man (1:2.0.0-47) ... Setting up gtk-doc-tools (1.34.0-1) ... Setting up sbuild-build-depends-main-dummy:riscv64 (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (riscv64 included in amd64 arm64 ppc64el mips64el s390x riscv64 x32 all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-26-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.112-1 (2024-09-30) amd64 (x86_64) Toolchain package versions: binutils_2.43.1-5 dpkg-dev_1.22.11 g++-14_14.2.0-8 gcc-14_14.2.0-8 libc6-dev_2.40-4 libstdc++-14-dev_14.2.0-8 libstdc++-14-dev-riscv64-cross_14.2.0-6cross1 libstdc++6_14.2.0-8 libstdc++6-riscv64-cross_14.2.0-6cross1 linux-libc-dev_6.11.10-1 Package versions: apt_2.9.14 autoconf_2.72-3 automake_1:1.16.5-1.3 autopoint_0.22.5-2 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+------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: vg Binary: vg, vg-docs Architecture: amd64 arm64 ppc64el mips64el s390x riscv64 x32 all Version: 1.59.0+ds-0.1 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/vgteam/vg#vg Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/vg Vcs-Git: https://salsa.debian.org/med-team/vg.git Testsuite: autopkgtest Testsuite-Triggers: libvcflib-tools Build-Depends: debhelper-compat (= 13), pv , bsdextrautils | bsdmainutils, zlib1g-dev, rs, libffi-dev, bwa , protobuf-compiler, libprotoc-dev, libprotobuf-dev, libjansson-dev, libbz2-dev, libtinfo6, libncurses-dev, automake, libtool, jq, samtools , unzip, librdf0-dev, cmake, pkgconf, bc, gtk-doc-tools, raptor2-utils , rasqal-utils , bison, flex, gawk, liblz4-dev, liblzma-dev, libcairo2-dev, libpixman-1-dev, libdeflate-dev, libboost-program-options-dev, libjemalloc-dev, libbackward-cpp-dev, elfutils, libdw-dev, libelf-dev, libraptor2-dev, libsparsehash-dev, rapidjson-dev, libfml-dev, libfastahack-dev, fastahack , tabix , xxd , libdivsufsort-dev, libtsl-hopscotch-map-dev, libvcflib-dev (>= 1.0.1), libvcflib-tools , libhts-dev, help2man , python3:any, libsimde-dev, libzstd-dev Build-Depends-Indep: doxygen , graphviz Package-List: vg deb science optional arch=amd64,arm64,ppc64el,mips64el,s390x,riscv64,x32 vg-docs deb doc optional arch=all Checksums-Sha1: 9cceebb48fb18c8618654723085c6aaa4321f386 69705744 vg_1.59.0+ds.orig.tar.xz ddd7d9f6b17fee1f35ac6d3a00de3d7b2e6e491c 117112 vg_1.59.0+ds-0.1.debian.tar.xz Checksums-Sha256: 17e43b91bce35905caf9af98e3b839eeff296af7105c1df818eb81004e6ab144 69705744 vg_1.59.0+ds.orig.tar.xz dfd2b9a5f833d45b9b5632b651de59668380352bc87fa2654b2c2c7acf6c423b 117112 vg_1.59.0+ds-0.1.debian.tar.xz Files: e8aff1b3feff38a4085bf4fbee107ac9 69705744 vg_1.59.0+ds.orig.tar.xz 66279467d1d25d09cdba16f34999a366 117112 vg_1.59.0+ds-0.1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQHEBAEBCgAuFiEEQGIgyLhVKAI3jM5BH1x6i0VWQxQFAmc/WKIQHGJhZ2VAZGVi aWFuLm9yZwAKCRAfXHqLRVZDFHNzDAChrlW8GHppGU1D++m3+LBMHm1tEC4x4pa4 85La0aNeKtBpMqH6R7GpLZJ2HkdjXCqWdKXv60UYX7ughXFl30EQoAT8OM6+gN1w 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avoid_abs_confusion dpkg-source: info: applying gcc-12 dpkg-source: info: applying use_packaged_libdeflate dpkg-source: info: applying use_packaged_jemalloc dpkg-source: info: applying use_packaged_libbackward-cpp dpkg-source: info: applying use_packaged_elfutils dpkg-source: info: applying use_packaged_raptor2 dpkg-source: info: applying no_need_for_snappy dpkg-source: info: applying use_packaged_sparsehash dpkg-source: info: applying use_packaged_fermi-lite dpkg-source: info: applying no_rpath dpkg-source: info: applying no_pg dpkg-source: info: applying use_packaged_fastahack dpkg-source: info: applying hardening_flags dpkg-source: info: applying static dpkg-source: info: applying use_packaged_lz4 dpkg-source: info: applying parallize_better dpkg-source: info: applying use_packaged_libtsl-hopscotch-map-dev dpkg-source: info: applying libVCFH_unneeded dpkg-source: info: applying better_clean dpkg-source: info: applying use_packaged_vcflib dpkg-source: info: applying use_packaged_htslib dpkg-source: info: applying simde dpkg-source: info: applying crossbuild dpkg-source: info: applying python3 Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.riscv64 DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa OLDPWD=/home/crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SBUILD_CONFIG=/tmp/tmp.qGWBs7tjG0/sbuild.conf SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-0c6fbf3a-a04b-490b-8c95-6d345792cf3d SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -ariscv64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package vg dpkg-buildpackage: info: source version 1.59.0+ds-0.1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Bastian Germann dpkg-architecture: warning: specified GNU system type riscv64-linux-gnu does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture riscv64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>' find /<>/include/ -type f -a '!' -name vg_git_version.hpp -delete dh_auto_clean || true make -j1 clean make[2]: Entering directory '/<>' Package libfastahack was not found in the pkg-config search path. Perhaps you should add the directory containing `libfastahack.pc' to the PKG_CONFIG_PATH environment variable Package 'libfastahack', required by 'virtual:world', not found Package cairo was not found in the pkg-config search path. Perhaps you should add the directory containing `cairo.pc' to the PKG_CONFIG_PATH environment variable Package 'cairo', required by 'virtual:world', not found Package 'libzstd', required by 'virtual:world', not found Package 'protobuf', required by 'virtual:world', not found Package 'jansson', required by 'virtual:world', not found Package libfastahack was not found in the pkg-config search path. Perhaps you should add the directory containing `libfastahack.pc' to the PKG_CONFIG_PATH environment variable Package 'libfastahack', required by 'virtual:world', not found Package htslib was not found in the pkg-config search path. Perhaps you should add the directory containing `htslib.pc' to the PKG_CONFIG_PATH environment variable Package 'htslib', required by 'virtual:world', not found Package cairo was not found in the pkg-config search path. Perhaps you should add the directory containing `cairo.pc' to the PKG_CONFIG_PATH environment variable Package 'cairo', required by 'virtual:world', not found Package 'libzstd', required by 'virtual:world', not found Package protobuf was not found in the pkg-config search path. Perhaps you should add the directory containing `protobuf.pc' to the PKG_CONFIG_PATH environment variable Package 'protobuf', required by 'virtual:world', not found Package 'jansson', required by 'virtual:world', not found OS is Linux Compiler g++ is assumed to be GCC CXXFLAGS are -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp LDFLAGS are -Wl,-z,relro -Wl,-z,now rm -f -r bin/unittest rm -f -r lib rm -f -r obj/unittest/support rm -f -r obj/unittest rm -f -r obj/subcommand rm -f -r obj/pic/io rm -f -r obj/io rm -f -r obj/pic/algorithms rm -f -r obj/algorithms rm -f -r obj/config rm -f -r obj/pic rm -f -r obj rm -f -r share/ cd ./deps && cd sonLib && make clean make[3]: Entering directory '/<>/deps/sonLib' cd C && make clean make[4]: Entering directory '/<>/deps/sonLib/C' rm -rf ../bin ../lib make[4]: Leaving directory '/<>/deps/sonLib/C' cd externalTools && make clean make[4]: Entering directory '/<>/deps/sonLib/externalTools' cd cutest && make clean make[5]: Entering directory '/<>/deps/sonLib/externalTools/cutest' rm -f ../../lib/cuTest.a ../../lib/CuTest.h make[5]: Leaving directory '/<>/deps/sonLib/externalTools/cutest' cd quicktree_1.1 && make clean make[5]: Entering directory '/<>/deps/sonLib/externalTools/quicktree_1.1' rm -rf ./obj/*.o make[5]: Leaving directory '/<>/deps/sonLib/externalTools/quicktree_1.1' make[4]: Leaving directory '/<>/deps/sonLib/externalTools' rm -f ./bin/sonLib_daemonize.py make[3]: Leaving directory '/<>/deps/sonLib' cd ./deps && cd gcsa2 && make clean make[3]: Entering directory '/<>/deps/gcsa2' Makefile:2: ../sdsl-lite/Make.helper: No such file or directory make[3]: *** No rule to make target '../sdsl-lite/Make.helper'. Stop. make[3]: Leaving directory '/<>/deps/gcsa2' make[2]: *** [Makefile:854: clean] Error 2 make[2]: Leaving directory '/<>' dh_auto_clean: error: make -j1 clean returned exit code 2 make[1]: Leaving directory '/<>' debian/rules override_dh_clean make[1]: Entering directory '/<>' rm -Rf ./deps/DYNAMIC/build/CMakeFiles dh_clean make[1]: Leaving directory '/<>' debian/rules binary-arch dh binary-arch dh_update_autotools_config -a debian/rules override_dh_autoreconf make[1]: Entering directory '/<>' dh_autoreconf --sourcedirectory=/<>/deps/vowpal_wabbit make[1]: Leaving directory '/<>' dh_auto_configure -a debian/rules override_dh_auto_build-arch make[1]: Entering directory '/<>' mkdir -p /<>/debian/help find . -type d -name simde | xargs rm -Rf dh_auto_build -- all test/build_graph bin/shuf make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=riscv64-linux-gnu-pkg-config CXX=riscv64-linux-gnu-g\+\+ CC=riscv64-linux-gnu-gcc all test/build_graph bin/shuf make[2]: Entering directory '/<>' OS is Linux Compiler riscv64-linux-gnu-g++ is assumed to be GCC CXXFLAGS are -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp LDFLAGS are -Wl,-z,relro -Wl,-z,now . ./source_me.sh && cd deps/sdsl-lite && BUILD_PORTABLE=1 CXXFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp" ./install.sh /<> Library will be installed in '/<>' WARNING: .git/hooks directory does not exists. The pre-commit hook is not installed. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The CXX compiler identification is GNU 14.2.0 -- The C compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/riscv64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/riscv64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Compiler is recent enough to support C++14. -- Performing Test HAVE_GCC_STD=C__14__WALL__WEXTRA__DNDEBUG -- Performing Test HAVE_GCC_STD=C__14__WALL__WEXTRA__DNDEBUG - Success -- Performing Test HAVE_GCC_O3__FFAST_MATH__FUNROLL_LOOPS -- Performing Test HAVE_GCC_O3__FFAST_MATH__FUNROLL_LOOPS - Success -- Performing Test HAVE_CXA_DEMANGLE -- Performing Test HAVE_CXA_DEMANGLE - Success -- Compiler supports DEMANGLE. -- Performing Test HAVE_GCC_DHAVE_CXA_DEMANGLE -- Performing Test HAVE_GCC_DHAVE_CXA_DEMANGLE - Success -- Could NOT find Git (missing: GIT_EXECUTABLE) CMake Warning at CMakeLists.txt:102 (message): git not found. Cloning of submodules will not work. -- Looking for C++ include cstdio -- Looking for C++ include cstdio - found -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Configuring done (1.2s) -- Generating done (0.1s) -- Build files have been written to: /<>/deps/sdsl-lite/build make[3]: Entering directory '/<>/deps/sdsl-lite/build' /usr/bin/cmake -S/<>/deps/sdsl-lite -B/<>/deps/sdsl-lite/build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 sdsl make[4]: Entering directory '/<>/deps/sdsl-lite/build' /usr/bin/cmake -S/<>/deps/sdsl-lite -B/<>/deps/sdsl-lite/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/deps/sdsl-lite/build/CMakeFiles 8 make -f CMakeFiles/Makefile2 lib/CMakeFiles/sdsl.dir/all make[5]: Entering directory '/<>/deps/sdsl-lite/build' make -f lib/CMakeFiles/sdsl.dir/build.make lib/CMakeFiles/sdsl.dir/depend make[6]: Entering directory '/<>/deps/sdsl-lite/build' cd /<>/deps/sdsl-lite/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/sdsl-lite /<>/deps/sdsl-lite/lib /<>/deps/sdsl-lite/build /<>/deps/sdsl-lite/build/lib /<>/deps/sdsl-lite/build/lib/CMakeFiles/sdsl.dir/DependInfo.cmake "--color=" make[6]: Leaving directory '/<>/deps/sdsl-lite/build' make -f lib/CMakeFiles/sdsl.dir/build.make lib/CMakeFiles/sdsl.dir/build make[6]: Entering directory '/<>/deps/sdsl-lite/build' [ 0%] Building CXX object lib/CMakeFiles/sdsl.dir/bits.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/bits.cpp.o -MF CMakeFiles/sdsl.dir/bits.cpp.o.d -o CMakeFiles/sdsl.dir/bits.cpp.o -c /<>/deps/sdsl-lite/lib/bits.cpp [ 12%] Building CXX object lib/CMakeFiles/sdsl.dir/bp_support_algorithm.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/bp_support_algorithm.cpp.o -MF CMakeFiles/sdsl.dir/bp_support_algorithm.cpp.o.d -o CMakeFiles/sdsl.dir/bp_support_algorithm.cpp.o -c /<>/deps/sdsl-lite/lib/bp_support_algorithm.cpp In file included from /<>/deps/sdsl-lite/build/lib/../include/sdsl/int_vector.hpp:24, from /<>/deps/sdsl-lite/build/lib/../include/sdsl/bp_support_algorithm.hpp:24, from /<>/deps/sdsl-lite/lib/bp_support_algorithm.cpp:1: In static member function ‘static void sdsl::bits::write_int(uint64_t*, uint64_t, uint8_t, uint8_t)’, inlined from ‘static void sdsl::memory_manager::resize(t_vec&, typename t_vec::size_type) [with t_vec = sdsl::int_vector<0>]’ at /<>/deps/sdsl-lite/build/lib/../include/sdsl/memory_management.hpp:364:36, inlined from ‘void sdsl::int_vector< >::bit_resize(size_type) [with unsigned char t_width = 0]’ at /<>/deps/sdsl-lite/build/lib/../include/sdsl/int_vector.hpp:1358:27, inlined from ‘void sdsl::int_vector< >::resize(size_type) [with unsigned char t_width = 0]’ at /<>/deps/sdsl-lite/build/lib/../include/sdsl/int_vector.hpp:380:23, inlined from ‘sdsl::int_vector< >::int_vector(size_type, value_type, uint8_t) [with unsigned char t_width = 0]’ at /<>/deps/sdsl-lite/build/lib/../include/sdsl/int_vector.hpp:1285:11, inlined from ‘sdsl::excess::impl::impl()’ at /<>/deps/sdsl-lite/build/lib/../include/sdsl/bp_support_algorithm.hpp:114:46: /<>/deps/sdsl-lite/build/lib/../include/sdsl/bits.hpp:448:9: warning: ‘*temp’ may be used uninitialized [-Wmaybe-uninitialized] 448 | *word &= | ^~~~~ [ 12%] Building CXX object lib/CMakeFiles/sdsl.dir/coder_elias_delta.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/coder_elias_delta.cpp.o -MF CMakeFiles/sdsl.dir/coder_elias_delta.cpp.o.d -o CMakeFiles/sdsl.dir/coder_elias_delta.cpp.o -c /<>/deps/sdsl-lite/lib/coder_elias_delta.cpp [ 12%] Building CXX object lib/CMakeFiles/sdsl.dir/coder_elias_gamma.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/coder_elias_gamma.cpp.o -MF CMakeFiles/sdsl.dir/coder_elias_gamma.cpp.o.d -o CMakeFiles/sdsl.dir/coder_elias_gamma.cpp.o -c /<>/deps/sdsl-lite/lib/coder_elias_gamma.cpp [ 12%] Building CXX object lib/CMakeFiles/sdsl.dir/coder_fibonacci.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/coder_fibonacci.cpp.o -MF CMakeFiles/sdsl.dir/coder_fibonacci.cpp.o.d -o CMakeFiles/sdsl.dir/coder_fibonacci.cpp.o -c /<>/deps/sdsl-lite/lib/coder_fibonacci.cpp [ 25%] Building CXX object lib/CMakeFiles/sdsl.dir/config.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/config.cpp.o -MF CMakeFiles/sdsl.dir/config.cpp.o.d -o CMakeFiles/sdsl.dir/config.cpp.o -c /<>/deps/sdsl-lite/lib/config.cpp [ 25%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_config.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/construct_config.cpp.o -MF CMakeFiles/sdsl.dir/construct_config.cpp.o.d -o CMakeFiles/sdsl.dir/construct_config.cpp.o -c /<>/deps/sdsl-lite/lib/construct_config.cpp [ 25%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_isa.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/construct_isa.cpp.o -MF CMakeFiles/sdsl.dir/construct_isa.cpp.o.d -o CMakeFiles/sdsl.dir/construct_isa.cpp.o -c /<>/deps/sdsl-lite/lib/construct_isa.cpp [ 25%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_lcp.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/construct_lcp.cpp.o -MF CMakeFiles/sdsl.dir/construct_lcp.cpp.o.d -o CMakeFiles/sdsl.dir/construct_lcp.cpp.o -c /<>/deps/sdsl-lite/lib/construct_lcp.cpp [ 37%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_lcp_helper.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/construct_lcp_helper.cpp.o -MF CMakeFiles/sdsl.dir/construct_lcp_helper.cpp.o.d -o CMakeFiles/sdsl.dir/construct_lcp_helper.cpp.o -c /<>/deps/sdsl-lite/lib/construct_lcp_helper.cpp [ 37%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_sa.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/construct_sa.cpp.o -MF CMakeFiles/sdsl.dir/construct_sa.cpp.o.d -o CMakeFiles/sdsl.dir/construct_sa.cpp.o -c /<>/deps/sdsl-lite/lib/construct_sa.cpp [ 37%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_sa_se.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/construct_sa_se.cpp.o -MF CMakeFiles/sdsl.dir/construct_sa_se.cpp.o.d -o CMakeFiles/sdsl.dir/construct_sa_se.cpp.o -c /<>/deps/sdsl-lite/lib/construct_sa_se.cpp [ 37%] Building CXX object lib/CMakeFiles/sdsl.dir/csa_alphabet_strategy.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/csa_alphabet_strategy.cpp.o -MF CMakeFiles/sdsl.dir/csa_alphabet_strategy.cpp.o.d -o CMakeFiles/sdsl.dir/csa_alphabet_strategy.cpp.o -c /<>/deps/sdsl-lite/lib/csa_alphabet_strategy.cpp [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/io.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/io.cpp.o -MF CMakeFiles/sdsl.dir/io.cpp.o.d -o CMakeFiles/sdsl.dir/io.cpp.o -c /<>/deps/sdsl-lite/lib/io.cpp [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/lcp_support_tree.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/lcp_support_tree.cpp.o -MF CMakeFiles/sdsl.dir/lcp_support_tree.cpp.o.d -o CMakeFiles/sdsl.dir/lcp_support_tree.cpp.o -c /<>/deps/sdsl-lite/lib/lcp_support_tree.cpp [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/louds_tree.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/louds_tree.cpp.o -MF CMakeFiles/sdsl.dir/louds_tree.cpp.o.d -o CMakeFiles/sdsl.dir/louds_tree.cpp.o -c /<>/deps/sdsl-lite/lib/louds_tree.cpp [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/memory_management.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/memory_management.cpp.o -MF CMakeFiles/sdsl.dir/memory_management.cpp.o.d -o CMakeFiles/sdsl.dir/memory_management.cpp.o -c /<>/deps/sdsl-lite/lib/memory_management.cpp [ 62%] Building CXX object lib/CMakeFiles/sdsl.dir/nn_dict_dynamic.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/nn_dict_dynamic.cpp.o -MF CMakeFiles/sdsl.dir/nn_dict_dynamic.cpp.o.d -o CMakeFiles/sdsl.dir/nn_dict_dynamic.cpp.o -c /<>/deps/sdsl-lite/lib/nn_dict_dynamic.cpp [ 62%] Building CXX object lib/CMakeFiles/sdsl.dir/ram_filebuf.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/ram_filebuf.cpp.o -MF CMakeFiles/sdsl.dir/ram_filebuf.cpp.o.d -o CMakeFiles/sdsl.dir/ram_filebuf.cpp.o -c /<>/deps/sdsl-lite/lib/ram_filebuf.cpp [ 62%] Building CXX object lib/CMakeFiles/sdsl.dir/ram_fs.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/ram_fs.cpp.o -MF CMakeFiles/sdsl.dir/ram_fs.cpp.o.d -o CMakeFiles/sdsl.dir/ram_fs.cpp.o -c /<>/deps/sdsl-lite/lib/ram_fs.cpp [ 62%] Building CXX object lib/CMakeFiles/sdsl.dir/rrr_vector_15.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/rrr_vector_15.cpp.o -MF CMakeFiles/sdsl.dir/rrr_vector_15.cpp.o.d -o CMakeFiles/sdsl.dir/rrr_vector_15.cpp.o -c /<>/deps/sdsl-lite/lib/rrr_vector_15.cpp [ 75%] Building CXX object lib/CMakeFiles/sdsl.dir/sd_vector.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/sd_vector.cpp.o -MF CMakeFiles/sdsl.dir/sd_vector.cpp.o.d -o CMakeFiles/sdsl.dir/sd_vector.cpp.o -c /<>/deps/sdsl-lite/lib/sd_vector.cpp [ 75%] Building CXX object lib/CMakeFiles/sdsl.dir/sfstream.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/sfstream.cpp.o -MF CMakeFiles/sdsl.dir/sfstream.cpp.o.d -o CMakeFiles/sdsl.dir/sfstream.cpp.o -c /<>/deps/sdsl-lite/lib/sfstream.cpp [ 75%] Building CXX object lib/CMakeFiles/sdsl.dir/simple_sds.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/simple_sds.cpp.o -MF CMakeFiles/sdsl.dir/simple_sds.cpp.o.d -o CMakeFiles/sdsl.dir/simple_sds.cpp.o -c /<>/deps/sdsl-lite/lib/simple_sds.cpp [ 75%] Building CXX object lib/CMakeFiles/sdsl.dir/structure_tree.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/structure_tree.cpp.o -MF CMakeFiles/sdsl.dir/structure_tree.cpp.o.d -o CMakeFiles/sdsl.dir/structure_tree.cpp.o -c /<>/deps/sdsl-lite/lib/structure_tree.cpp [ 87%] Building CXX object lib/CMakeFiles/sdsl.dir/uint128_t.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/uint128_t.cpp.o -MF CMakeFiles/sdsl.dir/uint128_t.cpp.o.d -o CMakeFiles/sdsl.dir/uint128_t.cpp.o -c /<>/deps/sdsl-lite/lib/uint128_t.cpp [ 87%] Building CXX object lib/CMakeFiles/sdsl.dir/uint256_t.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/uint256_t.cpp.o -MF CMakeFiles/sdsl.dir/uint256_t.cpp.o.d -o CMakeFiles/sdsl.dir/uint256_t.cpp.o -c /<>/deps/sdsl-lite/lib/uint256_t.cpp [ 87%] Building CXX object lib/CMakeFiles/sdsl.dir/util.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/util.cpp.o -MF CMakeFiles/sdsl.dir/util.cpp.o.d -o CMakeFiles/sdsl.dir/util.cpp.o -c /<>/deps/sdsl-lite/lib/util.cpp [ 87%] Building CXX object lib/CMakeFiles/sdsl.dir/wt_helper.cpp.o cd /<>/deps/sdsl-lite/build/lib && /usr/bin/riscv64-linux-gnu-g++ -DMODE_TI -I/<>/deps/sdsl-lite/build/lib/../include -I/<>/deps/sdsl-lite/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -O3 -DNDEBUG -MD -MT lib/CMakeFiles/sdsl.dir/wt_helper.cpp.o -MF CMakeFiles/sdsl.dir/wt_helper.cpp.o.d -o CMakeFiles/sdsl.dir/wt_helper.cpp.o -c /<>/deps/sdsl-lite/lib/wt_helper.cpp [100%] Linking CXX static library libsdsl.a cd /<>/deps/sdsl-lite/build/lib && /usr/bin/cmake -P CMakeFiles/sdsl.dir/cmake_clean_target.cmake cd /<>/deps/sdsl-lite/build/lib && /usr/bin/cmake -E cmake_link_script CMakeFiles/sdsl.dir/link.txt --verbose=1 /usr/bin/riscv64-linux-gnu-ar qc libsdsl.a CMakeFiles/sdsl.dir/bits.cpp.o CMakeFiles/sdsl.dir/bp_support_algorithm.cpp.o CMakeFiles/sdsl.dir/coder_elias_delta.cpp.o CMakeFiles/sdsl.dir/coder_elias_gamma.cpp.o CMakeFiles/sdsl.dir/coder_fibonacci.cpp.o CMakeFiles/sdsl.dir/config.cpp.o CMakeFiles/sdsl.dir/construct_config.cpp.o CMakeFiles/sdsl.dir/construct_isa.cpp.o CMakeFiles/sdsl.dir/construct_lcp.cpp.o CMakeFiles/sdsl.dir/construct_lcp_helper.cpp.o CMakeFiles/sdsl.dir/construct_sa.cpp.o CMakeFiles/sdsl.dir/construct_sa_se.cpp.o CMakeFiles/sdsl.dir/csa_alphabet_strategy.cpp.o CMakeFiles/sdsl.dir/io.cpp.o CMakeFiles/sdsl.dir/lcp_support_tree.cpp.o CMakeFiles/sdsl.dir/louds_tree.cpp.o CMakeFiles/sdsl.dir/memory_management.cpp.o CMakeFiles/sdsl.dir/nn_dict_dynamic.cpp.o CMakeFiles/sdsl.dir/ram_filebuf.cpp.o CMakeFiles/sdsl.dir/ram_fs.cpp.o CMakeFiles/sdsl.dir/rrr_vector_15.cpp.o CMakeFiles/sdsl.dir/sd_vector.cpp.o CMakeFiles/sdsl.dir/sfstream.cpp.o CMakeFiles/sdsl.dir/simple_sds.cpp.o CMakeFiles/sdsl.dir/structure_tree.cpp.o CMakeFiles/sdsl.dir/uint128_t.cpp.o CMakeFiles/sdsl.dir/uint256_t.cpp.o CMakeFiles/sdsl.dir/util.cpp.o CMakeFiles/sdsl.dir/wt_helper.cpp.o /usr/bin/riscv64-linux-gnu-ranlib libsdsl.a make[6]: Leaving directory '/<>/deps/sdsl-lite/build' [100%] Built target sdsl make[5]: Leaving directory '/<>/deps/sdsl-lite/build' /usr/bin/cmake -E cmake_progress_start /<>/deps/sdsl-lite/build/CMakeFiles 0 make[4]: Leaving directory '/<>/deps/sdsl-lite/build' make[3]: Leaving directory '/<>/deps/sdsl-lite/build' Removing old files rm -rf '/<>/include/sdsl/*' rm -f '/<>/lib/libsdsl*' make[3]: Entering directory '/<>/deps/sdsl-lite/build' /usr/bin/cmake -S/<>/deps/sdsl-lite -B/<>/deps/sdsl-lite/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/deps/sdsl-lite/build/CMakeFiles /<>/deps/sdsl-lite/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[4]: Entering directory '/<>/deps/sdsl-lite/build' make -f lib/CMakeFiles/sdsl.dir/build.make lib/CMakeFiles/sdsl.dir/depend make[5]: Entering directory '/<>/deps/sdsl-lite/build' cd /<>/deps/sdsl-lite/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/sdsl-lite /<>/deps/sdsl-lite/lib /<>/deps/sdsl-lite/build /<>/deps/sdsl-lite/build/lib /<>/deps/sdsl-lite/build/lib/CMakeFiles/sdsl.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/sdsl-lite/build' make -f lib/CMakeFiles/sdsl.dir/build.make lib/CMakeFiles/sdsl.dir/build make[5]: Entering directory '/<>/deps/sdsl-lite/build' make[5]: Nothing to be done for 'lib/CMakeFiles/sdsl.dir/build'. make[5]: Leaving directory '/<>/deps/sdsl-lite/build' [100%] Built target sdsl make[4]: Leaving directory '/<>/deps/sdsl-lite/build' /usr/bin/cmake -E cmake_progress_start /<>/deps/sdsl-lite/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[4]: Entering directory '/<>/deps/sdsl-lite/build' make[4]: Nothing to be done for 'preinstall'. make[4]: Leaving directory '/<>/deps/sdsl-lite/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /<>/lib/pkgconfig/sdsl-lite.pc -- Installing: /<>/include/sdsl/bit_vector_il.hpp -- Installing: /<>/include/sdsl/bit_vectors.hpp -- Installing: /<>/include/sdsl/bits.hpp -- Installing: /<>/include/sdsl/bp_support.hpp -- Installing: /<>/include/sdsl/bp_support_algorithm.hpp -- Installing: /<>/include/sdsl/bp_support_g.hpp -- Installing: /<>/include/sdsl/bp_support_gg.hpp -- Installing: /<>/include/sdsl/bp_support_sada.hpp -- Installing: /<>/include/sdsl/coder.hpp -- Installing: /<>/include/sdsl/coder_comma.hpp -- Installing: /<>/include/sdsl/coder_elias_delta.hpp -- Installing: /<>/include/sdsl/coder_elias_gamma.hpp -- Installing: /<>/include/sdsl/coder_fibonacci.hpp -- Installing: /<>/include/sdsl/config.hpp -- Installing: /<>/include/sdsl/construct.hpp -- Installing: /<>/include/sdsl/construct_bwt.hpp -- Installing: /<>/include/sdsl/construct_config.hpp -- Installing: /<>/include/sdsl/construct_isa.hpp -- Installing: /<>/include/sdsl/construct_lcp.hpp -- Installing: /<>/include/sdsl/construct_lcp_helper.hpp -- Installing: /<>/include/sdsl/construct_sa.hpp -- Installing: /<>/include/sdsl/construct_sa_se.hpp -- Installing: /<>/include/sdsl/csa_alphabet_strategy.hpp -- Installing: /<>/include/sdsl/csa_bitcompressed.hpp -- Installing: /<>/include/sdsl/csa_sada.hpp -- Installing: /<>/include/sdsl/csa_sampling_strategy.hpp -- Installing: /<>/include/sdsl/csa_wt.hpp -- Installing: /<>/include/sdsl/cst_fully.hpp -- Installing: /<>/include/sdsl/cst_iterators.hpp -- Installing: /<>/include/sdsl/cst_sada.hpp -- Installing: /<>/include/sdsl/cst_sct3.hpp -- Installing: /<>/include/sdsl/dac_vector.hpp -- Installing: /<>/include/sdsl/enc_vector.hpp -- Installing: /<>/include/sdsl/fast_cache.hpp -- Installing: /<>/include/sdsl/hyb_vector.hpp -- Installing: /<>/include/sdsl/int_vector.hpp -- Installing: /<>/include/sdsl/int_vector_buffer.hpp -- Installing: /<>/include/sdsl/int_vector_io_wrappers.hpp -- Installing: /<>/include/sdsl/int_vector_mapper.hpp -- Installing: /<>/include/sdsl/inv_perm_support.hpp -- Installing: /<>/include/sdsl/io.hpp -- Installing: /<>/include/sdsl/iterators.hpp -- Installing: /<>/include/sdsl/k2_treap.hpp -- Installing: /<>/include/sdsl/k2_treap_algorithm.hpp -- Installing: /<>/include/sdsl/k2_treap_helper.hpp -- Installing: /<>/include/sdsl/k2_tree.hpp -- Installing: /<>/include/sdsl/k2_tree_helper.hpp -- Installing: /<>/include/sdsl/lcp.hpp -- Installing: /<>/include/sdsl/lcp_bitcompressed.hpp -- Installing: /<>/include/sdsl/lcp_byte.hpp -- Installing: /<>/include/sdsl/lcp_dac.hpp -- Installing: /<>/include/sdsl/lcp_support_sada.hpp -- Installing: /<>/include/sdsl/lcp_support_tree.hpp -- Installing: /<>/include/sdsl/lcp_support_tree2.hpp -- Installing: /<>/include/sdsl/lcp_vlc.hpp -- Installing: /<>/include/sdsl/lcp_wt.hpp -- Installing: /<>/include/sdsl/louds_tree.hpp -- Installing: /<>/include/sdsl/memory_management.hpp -- Installing: /<>/include/sdsl/nearest_neighbour_dictionary.hpp -- Installing: /<>/include/sdsl/nn_dict_dynamic.hpp -- Installing: /<>/include/sdsl/qsufsort.hpp -- Installing: /<>/include/sdsl/ram_filebuf.hpp -- Installing: /<>/include/sdsl/ram_fs.hpp -- Installing: /<>/include/sdsl/rank_support.hpp -- Installing: /<>/include/sdsl/rank_support_scan.hpp -- Installing: /<>/include/sdsl/rank_support_v.hpp -- Installing: /<>/include/sdsl/rank_support_v5.hpp -- Installing: /<>/include/sdsl/raster_img.hpp -- Installing: /<>/include/sdsl/rle_vector.hpp -- Installing: /<>/include/sdsl/rmq_succinct_sada.hpp -- Installing: /<>/include/sdsl/rmq_succinct_sct.hpp -- Installing: /<>/include/sdsl/rmq_support.hpp -- Installing: /<>/include/sdsl/rmq_support_sparse_table.hpp -- Installing: /<>/include/sdsl/rrr_helper.hpp -- Installing: /<>/include/sdsl/rrr_vector.hpp -- Installing: /<>/include/sdsl/rrr_vector_15.hpp -- Installing: /<>/include/sdsl/sd_vector.hpp -- Installing: /<>/include/sdsl/sdsl_concepts.hpp -- Installing: /<>/include/sdsl/select_support.hpp -- Installing: /<>/include/sdsl/select_support_mcl.hpp -- Installing: /<>/include/sdsl/select_support_scan.hpp -- Installing: /<>/include/sdsl/sfstream.hpp -- Installing: /<>/include/sdsl/simple_sds.hpp -- Installing: /<>/include/sdsl/sorted_int_stack.hpp -- Installing: /<>/include/sdsl/sorted_multi_stack_support.hpp -- Installing: /<>/include/sdsl/sorted_stack_support.hpp -- Installing: /<>/include/sdsl/structure_tree.hpp -- Installing: /<>/include/sdsl/suffix_array_algorithm.hpp -- Installing: /<>/include/sdsl/suffix_array_helper.hpp -- Installing: /<>/include/sdsl/suffix_arrays.hpp -- Installing: /<>/include/sdsl/suffix_tree_algorithm.hpp -- Installing: /<>/include/sdsl/suffix_tree_helper.hpp -- Installing: /<>/include/sdsl/suffix_trees.hpp -- Installing: /<>/include/sdsl/uint128_t.hpp -- Installing: /<>/include/sdsl/uint256_t.hpp -- Installing: /<>/include/sdsl/uintx_t.hpp -- Installing: /<>/include/sdsl/util.hpp -- Installing: /<>/include/sdsl/vectors.hpp -- Installing: /<>/include/sdsl/vlc_vector.hpp -- Installing: /<>/include/sdsl/wavelet_trees.hpp -- Installing: /<>/include/sdsl/wm_int.hpp -- Installing: /<>/include/sdsl/wt_algorithm.hpp -- Installing: /<>/include/sdsl/wt_ap.hpp -- Installing: /<>/include/sdsl/wt_blcd.hpp -- Installing: /<>/include/sdsl/wt_gmr.hpp -- Installing: /<>/include/sdsl/wt_helper.hpp -- Installing: /<>/include/sdsl/wt_huff.hpp -- Installing: /<>/include/sdsl/wt_hutu.hpp -- Installing: /<>/include/sdsl/wt_int.hpp -- Installing: /<>/include/sdsl/wt_pc.hpp -- Installing: /<>/include/sdsl/wt_rlmn.hpp -- Installing: /<>/lib/libsdsl.a make[3]: Leaving directory '/<>/deps/sdsl-lite/build' SUCCESS: sdsl was installed successfully! The sdsl include files are located in '/<>/include'. The library files are located in '/<>/lib'. Sample programs can be found in the examples-directory. Tests in the test-directory A cheat sheet in the extras/cheatsheet-directory. Have fun! . ./source_me.sh && cd deps/ssw/src && make && ar rs /<>/lib/libssw.a ssw.o ssw_cpp.o && cp ssw_cpp.h ssw.h /<>/include make[3]: Entering directory '/<>/deps/ssw/src' riscv64-linux-gnu-gcc -c -o ssw.o ssw.c -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -pipe -O3 -I. riscv64-linux-gnu-gcc -o ssw_test ssw.o main.c -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -pipe -O3 -I. -lm -lz riscv64-linux-gnu-gcc -o example_c ssw.o example.c -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -pipe -O3 -I. -lm -lz riscv64-linux-gnu-g++ -c -o ssw_cpp.o ssw_cpp.cpp -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -pipe -O3 -I. cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ riscv64-linux-gnu-g++ -o example_cpp example.cpp ssw.o ssw_cpp.o -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -pipe -O3 -I. -lm -lz cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ riscv64-linux-gnu-gcc -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -pipe -O3 -I. -fPIC -shared -o libssw.so ssw.c make[3]: Leaving directory '/<>/deps/ssw/src' ar: creating /<>/lib/libssw.a . ./source_me.sh && cp -r deps/gcsa2/include/gcsa /<>/include/ && cd deps/gcsa2 && make directories && make lib/libgcsa2.a && mv lib/libgcsa2.a /<>/lib make[3]: Entering directory '/<>/deps/gcsa2' mkdir -p bin mkdir -p lib mkdir -p obj make[3]: Leaving directory '/<>/deps/gcsa2' make[3]: Entering directory '/<>/deps/gcsa2' /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/algorithms.o src/algorithms.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/dbg.o src/dbg.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/files.o src/files.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/gcsa.o src/gcsa.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/internal.o src/internal.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/lcp.o src/lcp.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/path_graph.o src/path_graph.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/support.o src/support.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/utils.o src/utils.cpp ar rcs lib/libgcsa2.a obj/algorithms.o obj/dbg.o obj/files.o obj/gcsa.o obj/internal.o obj/lcp.o obj/path_graph.o obj/support.o obj/utils.o make[3]: Leaving directory '/<>/deps/gcsa2' . ./source_me.sh && cp -r deps/gbwt/include/gbwt /<>/include/ && cd deps/gbwt && make clean && make && mv lib/libgbwt.a /<>/lib make[3]: Entering directory '/<>/deps/gbwt' rm -rf bin lib obj rm -f *.o *.a build_gbwt build_ri merge_gbwt benchmark metadata_tool remove_seq cd tests && make clean make[4]: Entering directory '/<>/deps/gbwt/tests' rm -f test_bwtmerge test_metadata test_queries test_support test_variants *.o make[4]: Leaving directory '/<>/deps/gbwt/tests' make[3]: Leaving directory '/<>/deps/gbwt' make[3]: Entering directory '/<>/deps/gbwt' mkdir -p bin mkdir -p lib mkdir -p obj /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/algorithms.o src/algorithms.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/bwtmerge.o src/bwtmerge.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/cached_gbwt.o src/cached_gbwt.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/dynamic_gbwt.o src/dynamic_gbwt.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/fast_locate.o src/fast_locate.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/files.o src/files.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/gbwt.o src/gbwt.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat 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-O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/metadata.o src/metadata.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/support.o src/support.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat 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-ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/utils.o src/utils.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/variants.o src/variants.cpp ar rcs lib/libgbwt.a obj/algorithms.o obj/bwtmerge.o obj/cached_gbwt.o obj/dynamic_gbwt.o obj/fast_locate.o obj/files.o obj/gbwt.o obj/internal.o obj/metadata.o obj/support.o obj/test.o obj/utils.o obj/variants.o /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/build_gbwt.o src/build_gbwt.cpp /usr/bin/riscv64-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time 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-Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/metadata_tool.o src/metadata_tool.cpp /usr/bin/riscv64-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -o bin/metadata_tool obj/metadata_tool.o lib/libgbwt.a -L/<>/lib -lsdsl -ldivsufsort -ldivsufsort64 /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/remove_seq.o src/remove_seq.cpp /usr/bin/riscv64-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -o bin/remove_seq obj/remove_seq.o lib/libgbwt.a -L/<>/lib -lsdsl -ldivsufsort -ldivsufsort64 rm obj/build_ri.o obj/metadata_tool.o obj/benchmark.o obj/merge_gbwt.o obj/remove_seq.o obj/build_gbwt.o make[3]: Leaving directory '/<>/deps/gbwt' . ./source_me.sh && cd deps/libhandlegraph && rm -Rf build CMakeCache.txt CMakeFiles && mkdir build && cd build && CXXFLAGS="-std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2" cmake -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_PREFIX=/<> -DCMAKE_INSTALL_LIBDIR=lib .. && make && make install -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/riscv64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/riscv64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done libhandlegraph is root project or external_project -- Configuring done (0.4s) -- Generating done (0.0s) -- Build files have been written to: /<>/deps/libhandlegraph/build make[3]: Entering directory '/<>/deps/libhandlegraph/build' /usr/bin/cmake -S/<>/deps/libhandlegraph -B/<>/deps/libhandlegraph/build --check-build-system 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/usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/deletable_handle_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/deletable_handle_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/deletable_handle_graph.cpp.o -c /<>/deps/libhandlegraph/src/deletable_handle_graph.cpp [ 5%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/dfs.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/dfs.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/dfs.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/dfs.cpp.o -c /<>/deps/libhandlegraph/src/dfs.cpp [ 8%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/handle_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/handle_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/handle_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/handle_graph.cpp.o -c /<>/deps/libhandlegraph/src/handle_graph.cpp [ 11%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/mutable_handle_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/mutable_handle_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/mutable_handle_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/mutable_handle_graph.cpp.o -c /<>/deps/libhandlegraph/src/mutable_handle_graph.cpp [ 14%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o -c /<>/deps/libhandlegraph/src/path_metadata.cpp [ 17%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/mutable_path_metadata.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/mutable_path_metadata.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/mutable_path_metadata.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/mutable_path_metadata.cpp.o -c /<>/deps/libhandlegraph/src/mutable_path_metadata.cpp [ 20%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/path_handle_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/path_handle_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/path_handle_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/path_handle_graph.cpp.o -c /<>/deps/libhandlegraph/src/path_handle_graph.cpp [ 22%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/path_position_handle_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/path_position_handle_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/path_position_handle_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/path_position_handle_graph.cpp.o -c /<>/deps/libhandlegraph/src/path_position_handle_graph.cpp [ 25%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/mutable_path_handle_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/mutable_path_handle_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/mutable_path_handle_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/mutable_path_handle_graph.cpp.o -c /<>/deps/libhandlegraph/src/mutable_path_handle_graph.cpp [ 28%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/ranked_handle_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/ranked_handle_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/ranked_handle_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/ranked_handle_graph.cpp.o -c /<>/deps/libhandlegraph/src/ranked_handle_graph.cpp [ 31%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/serializable.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/serializable.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/serializable.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/serializable.cpp.o -c /<>/deps/libhandlegraph/src/serializable.cpp [ 34%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/snarl_decomposition.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/snarl_decomposition.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/snarl_decomposition.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/snarl_decomposition.cpp.o -c /<>/deps/libhandlegraph/src/snarl_decomposition.cpp [ 37%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/trivially_serializable.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/trivially_serializable.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/trivially_serializable.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/trivially_serializable.cpp.o -c /<>/deps/libhandlegraph/src/trivially_serializable.cpp [ 40%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/types.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/types.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/types.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/types.cpp.o -c /<>/deps/libhandlegraph/src/types.cpp [ 42%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/copy_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/copy_graph.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/copy_graph.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/copy_graph.cpp.o -c /<>/deps/libhandlegraph/src/copy_graph.cpp [ 45%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/append_graph.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time 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/usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/find_tips.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/find_tips.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/find_tips.cpp.o -c /<>/deps/libhandlegraph/src/find_tips.cpp [ 54%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/topological_sort.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/topological_sort.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/topological_sort.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/topological_sort.cpp.o -c /<>/deps/libhandlegraph/src/topological_sort.cpp [ 57%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/apply_orientations.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/apply_orientations.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/apply_orientations.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/apply_orientations.cpp.o -c /<>/deps/libhandlegraph/src/apply_orientations.cpp [ 60%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/is_single_stranded.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/is_single_stranded.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/is_single_stranded.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/is_single_stranded.cpp.o -c /<>/deps/libhandlegraph/src/is_single_stranded.cpp [ 62%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/count_walks.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/count_walks.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/count_walks.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/count_walks.cpp.o -c /<>/deps/libhandlegraph/src/count_walks.cpp [ 65%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/eades_algorithm.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/eades_algorithm.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/eades_algorithm.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/eades_algorithm.cpp.o -c /<>/deps/libhandlegraph/src/eades_algorithm.cpp [ 68%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/dagify.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/dagify.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/dagify.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/dagify.cpp.o -c /<>/deps/libhandlegraph/src/dagify.cpp In file included from /usr/riscv64-linux-gnu/include/c++/14/riscv64-linux-gnu/bits/c++allocator.h:33, from /usr/riscv64-linux-gnu/include/c++/14/bits/allocator.h:46, from /usr/riscv64-linux-gnu/include/c++/14/vector:63, from /<>/deps/libhandlegraph/src/dagify.cpp:8: In member function ‘void std::__new_allocator<_Tp>::deallocate(_Tp*, size_type) [with _Tp = long int]’, inlined from ‘static void std::allocator_traits >::deallocate(allocator_type&, pointer, size_type) [with _Tp = long int]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/alloc_traits.h:544:23, inlined from ‘void std::_Vector_base<_Tp, _Alloc>::_M_deallocate(pointer, std::size_t) [with _Tp = long int; _Alloc = std::allocator]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/stl_vector.h:389:19, inlined from ‘std::_Vector_base<_Tp, _Alloc>::~_Vector_base() [with _Tp = long int; _Alloc = std::allocator]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/stl_vector.h:368:15, inlined from ‘std::vector<_Tp, _Alloc>::~vector() [with _Tp = long int; _Alloc = std::allocator]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/stl_vector.h:738:7, inlined from ‘std::unordered_map handlegraph::algorithms::dagify(const handlegraph::HandleGraph*, handlegraph::MutableHandleGraph*, size_t)’ at /<>/deps/libhandlegraph/src/dagify.cpp:445:5: /usr/riscv64-linux-gnu/include/c++/14/bits/new_allocator.h:172:33: warning: ‘void operator delete(void*, std::size_t)’ called on pointer ‘’ with nonzero offset [1, 9223372036854775800] [-Wfree-nonheap-object] 172 | _GLIBCXX_OPERATOR_DELETE(_GLIBCXX_SIZED_DEALLOC(__p, __n)); | ^ In member function ‘_Tp* std::__new_allocator<_Tp>::allocate(size_type, const void*) [with _Tp = long int]’, inlined from ‘static _Tp* std::allocator_traits >::allocate(allocator_type&, size_type) [with _Tp = long int]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/alloc_traits.h:509:28, inlined from ‘std::_Vector_base<_Tp, _Alloc>::pointer std::_Vector_base<_Tp, _Alloc>::_M_allocate(std::size_t) [with _Tp = long int; _Alloc = std::allocator]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/stl_vector.h:380:33, inlined from ‘void std::_Vector_base<_Tp, _Alloc>::_M_create_storage(std::size_t) [with _Tp = long int; _Alloc = std::allocator]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/stl_vector.h:398:44, inlined from ‘std::_Vector_base<_Tp, _Alloc>::_Vector_base(std::size_t, const allocator_type&) [with _Tp = long int; _Alloc = std::allocator]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/stl_vector.h:334:26, inlined from ‘std::vector<_Tp, _Alloc>::vector(size_type, const value_type&, const allocator_type&) [with _Tp = long int; _Alloc = std::allocator]’ at /usr/riscv64-linux-gnu/include/c++/14/bits/stl_vector.h:571:47, inlined from ‘std::unordered_map handlegraph::algorithms::dagify(const handlegraph::HandleGraph*, handlegraph::MutableHandleGraph*, size_t)’ at /<>/deps/libhandlegraph/src/dagify.cpp:327:85: /usr/riscv64-linux-gnu/include/c++/14/bits/new_allocator.h:151:55: note: returned from ‘void* operator new(std::size_t)’ 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ [ 71%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/strongly_connected_components.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/strongly_connected_components.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/strongly_connected_components.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/strongly_connected_components.cpp.o -c /<>/deps/libhandlegraph/src/strongly_connected_components.cpp [ 74%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/find_shortest_paths.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/find_shortest_paths.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/find_shortest_paths.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/find_shortest_paths.cpp.o -c /<>/deps/libhandlegraph/src/find_shortest_paths.cpp [ 77%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/dijkstra.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/dijkstra.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/dijkstra.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/dijkstra.cpp.o -c /<>/deps/libhandlegraph/src/dijkstra.cpp [ 80%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/is_acyclic.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/is_acyclic.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/is_acyclic.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/is_acyclic.cpp.o -c /<>/deps/libhandlegraph/src/is_acyclic.cpp [ 82%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/reverse_complement.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/reverse_complement.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/reverse_complement.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/reverse_complement.cpp.o -c /<>/deps/libhandlegraph/src/reverse_complement.cpp [ 85%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/split_strands.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/split_strands.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/split_strands.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/split_strands.cpp.o -c /<>/deps/libhandlegraph/src/split_strands.cpp [ 88%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o -c /<>/deps/libhandlegraph/src/chop.cpp [ 91%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/weakly_connected_components.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/weakly_connected_components.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/weakly_connected_components.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/weakly_connected_components.cpp.o -c /<>/deps/libhandlegraph/src/weakly_connected_components.cpp [ 94%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/extend.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libhandlegraph/src/include -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -std=gnu++14 -fPIC -MD -MT CMakeFiles/handlegraph_objs.dir/src/extend.cpp.o -MF CMakeFiles/handlegraph_objs.dir/src/extend.cpp.o.d -o CMakeFiles/handlegraph_objs.dir/src/extend.cpp.o -c /<>/deps/libhandlegraph/src/extend.cpp make[5]: Leaving directory '/<>/deps/libhandlegraph/build' [ 94%] Built target handlegraph_objs make -f CMakeFiles/handlegraph_shared.dir/build.make CMakeFiles/handlegraph_shared.dir/depend make[5]: Entering directory '/<>/deps/libhandlegraph/build' cd /<>/deps/libhandlegraph/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/libhandlegraph /<>/deps/libhandlegraph /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build/CMakeFiles/handlegraph_shared.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/libhandlegraph/build' make -f CMakeFiles/handlegraph_shared.dir/build.make CMakeFiles/handlegraph_shared.dir/build make[5]: Entering directory '/<>/deps/libhandlegraph/build' [ 97%] Linking CXX shared library libhandlegraph.so /usr/bin/cmake -E cmake_link_script CMakeFiles/handlegraph_shared.dir/link.txt --verbose=1 /usr/bin/riscv64-linux-gnu-g++ -fPIC -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wl,--dependency-file,CMakeFiles/handlegraph_shared.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libhandlegraph.so -o libhandlegraph.so CMakeFiles/handlegraph_objs.dir/src/deletable_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/dfs.cpp.o CMakeFiles/handlegraph_objs.dir/src/handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/mutable_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o CMakeFiles/handlegraph_objs.dir/src/mutable_path_metadata.cpp.o CMakeFiles/handlegraph_objs.dir/src/path_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/path_position_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/mutable_path_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/ranked_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/serializable.cpp.o CMakeFiles/handlegraph_objs.dir/src/snarl_decomposition.cpp.o CMakeFiles/handlegraph_objs.dir/src/trivially_serializable.cpp.o CMakeFiles/handlegraph_objs.dir/src/types.cpp.o CMakeFiles/handlegraph_objs.dir/src/copy_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/append_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/are_equivalent.cpp.o CMakeFiles/handlegraph_objs.dir/src/find_tips.cpp.o CMakeFiles/handlegraph_objs.dir/src/topological_sort.cpp.o CMakeFiles/handlegraph_objs.dir/src/apply_orientations.cpp.o CMakeFiles/handlegraph_objs.dir/src/is_single_stranded.cpp.o CMakeFiles/handlegraph_objs.dir/src/count_walks.cpp.o CMakeFiles/handlegraph_objs.dir/src/eades_algorithm.cpp.o CMakeFiles/handlegraph_objs.dir/src/dagify.cpp.o CMakeFiles/handlegraph_objs.dir/src/strongly_connected_components.cpp.o CMakeFiles/handlegraph_objs.dir/src/find_shortest_paths.cpp.o CMakeFiles/handlegraph_objs.dir/src/dijkstra.cpp.o CMakeFiles/handlegraph_objs.dir/src/is_acyclic.cpp.o CMakeFiles/handlegraph_objs.dir/src/reverse_complement.cpp.o CMakeFiles/handlegraph_objs.dir/src/split_strands.cpp.o CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o CMakeFiles/handlegraph_objs.dir/src/weakly_connected_components.cpp.o CMakeFiles/handlegraph_objs.dir/src/extend.cpp.o make[5]: Leaving directory '/<>/deps/libhandlegraph/build' [ 97%] Built target handlegraph_shared make -f CMakeFiles/handlegraph_static.dir/build.make CMakeFiles/handlegraph_static.dir/depend make[5]: Entering directory '/<>/deps/libhandlegraph/build' cd /<>/deps/libhandlegraph/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/libhandlegraph /<>/deps/libhandlegraph /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build/CMakeFiles/handlegraph_static.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/libhandlegraph/build' make -f CMakeFiles/handlegraph_static.dir/build.make CMakeFiles/handlegraph_static.dir/build make[5]: Entering directory '/<>/deps/libhandlegraph/build' [100%] Linking CXX static library libhandlegraph.a /usr/bin/cmake -P CMakeFiles/handlegraph_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/handlegraph_static.dir/link.txt --verbose=1 /usr/bin/riscv64-linux-gnu-ar qc libhandlegraph.a CMakeFiles/handlegraph_objs.dir/src/deletable_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/dfs.cpp.o CMakeFiles/handlegraph_objs.dir/src/handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/mutable_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o CMakeFiles/handlegraph_objs.dir/src/mutable_path_metadata.cpp.o CMakeFiles/handlegraph_objs.dir/src/path_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/path_position_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/mutable_path_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/ranked_handle_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/serializable.cpp.o CMakeFiles/handlegraph_objs.dir/src/snarl_decomposition.cpp.o CMakeFiles/handlegraph_objs.dir/src/trivially_serializable.cpp.o CMakeFiles/handlegraph_objs.dir/src/types.cpp.o CMakeFiles/handlegraph_objs.dir/src/copy_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/append_graph.cpp.o CMakeFiles/handlegraph_objs.dir/src/are_equivalent.cpp.o CMakeFiles/handlegraph_objs.dir/src/find_tips.cpp.o CMakeFiles/handlegraph_objs.dir/src/topological_sort.cpp.o CMakeFiles/handlegraph_objs.dir/src/apply_orientations.cpp.o CMakeFiles/handlegraph_objs.dir/src/is_single_stranded.cpp.o CMakeFiles/handlegraph_objs.dir/src/count_walks.cpp.o CMakeFiles/handlegraph_objs.dir/src/eades_algorithm.cpp.o CMakeFiles/handlegraph_objs.dir/src/dagify.cpp.o CMakeFiles/handlegraph_objs.dir/src/strongly_connected_components.cpp.o CMakeFiles/handlegraph_objs.dir/src/find_shortest_paths.cpp.o CMakeFiles/handlegraph_objs.dir/src/dijkstra.cpp.o CMakeFiles/handlegraph_objs.dir/src/is_acyclic.cpp.o CMakeFiles/handlegraph_objs.dir/src/reverse_complement.cpp.o CMakeFiles/handlegraph_objs.dir/src/split_strands.cpp.o CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o CMakeFiles/handlegraph_objs.dir/src/weakly_connected_components.cpp.o CMakeFiles/handlegraph_objs.dir/src/extend.cpp.o /usr/bin/riscv64-linux-gnu-ranlib libhandlegraph.a make[5]: Leaving directory '/<>/deps/libhandlegraph/build' [100%] Built target handlegraph_static make[4]: Leaving directory '/<>/deps/libhandlegraph/build' /usr/bin/cmake -E cmake_progress_start /<>/deps/libhandlegraph/build/CMakeFiles 0 make[3]: Leaving directory '/<>/deps/libhandlegraph/build' make[3]: Entering directory '/<>/deps/libhandlegraph/build' /usr/bin/cmake -S/<>/deps/libhandlegraph -B/<>/deps/libhandlegraph/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/deps/libhandlegraph/build/CMakeFiles /<>/deps/libhandlegraph/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[4]: Entering directory '/<>/deps/libhandlegraph/build' make -f CMakeFiles/handlegraph_objs.dir/build.make CMakeFiles/handlegraph_objs.dir/depend make[5]: Entering directory '/<>/deps/libhandlegraph/build' cd /<>/deps/libhandlegraph/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/libhandlegraph /<>/deps/libhandlegraph /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build/CMakeFiles/handlegraph_objs.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/libhandlegraph/build' make -f CMakeFiles/handlegraph_objs.dir/build.make CMakeFiles/handlegraph_objs.dir/build make[5]: Entering directory '/<>/deps/libhandlegraph/build' make[5]: Nothing to be done for 'CMakeFiles/handlegraph_objs.dir/build'. make[5]: Leaving directory '/<>/deps/libhandlegraph/build' [ 94%] Built target handlegraph_objs make -f CMakeFiles/handlegraph_shared.dir/build.make CMakeFiles/handlegraph_shared.dir/depend make[5]: Entering directory '/<>/deps/libhandlegraph/build' cd /<>/deps/libhandlegraph/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/libhandlegraph /<>/deps/libhandlegraph /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build/CMakeFiles/handlegraph_shared.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/libhandlegraph/build' make -f CMakeFiles/handlegraph_shared.dir/build.make CMakeFiles/handlegraph_shared.dir/build make[5]: Entering directory '/<>/deps/libhandlegraph/build' make[5]: Nothing to be done for 'CMakeFiles/handlegraph_shared.dir/build'. make[5]: Leaving directory '/<>/deps/libhandlegraph/build' [ 97%] Built target handlegraph_shared make -f CMakeFiles/handlegraph_static.dir/build.make CMakeFiles/handlegraph_static.dir/depend make[5]: Entering directory '/<>/deps/libhandlegraph/build' cd /<>/deps/libhandlegraph/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/libhandlegraph /<>/deps/libhandlegraph /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build /<>/deps/libhandlegraph/build/CMakeFiles/handlegraph_static.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/libhandlegraph/build' make -f CMakeFiles/handlegraph_static.dir/build.make CMakeFiles/handlegraph_static.dir/build make[5]: Entering directory '/<>/deps/libhandlegraph/build' make[5]: Nothing to be done for 'CMakeFiles/handlegraph_static.dir/build'. make[5]: Leaving directory '/<>/deps/libhandlegraph/build' [100%] Built target handlegraph_static make[4]: Leaving directory '/<>/deps/libhandlegraph/build' /usr/bin/cmake -E cmake_progress_start /<>/deps/libhandlegraph/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[4]: Entering directory '/<>/deps/libhandlegraph/build' make[4]: Nothing to be done for 'preinstall'. make[4]: Leaving directory '/<>/deps/libhandlegraph/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "" -- Installing: /<>/lib/libhandlegraph.so -- Installing: /<>/lib/libhandlegraph.a -- Installing: /<>/include/handlegraph -- Installing: /<>/include/handlegraph/serializable.hpp -- Installing: /<>/include/handlegraph/util.hpp -- Installing: /<>/include/handlegraph/types.hpp -- Installing: /<>/include/handlegraph/trivially_serializable.hpp -- Installing: /<>/include/handlegraph/snarl_decomposition.hpp -- Installing: /<>/include/handlegraph/serializable_handle_graph.hpp -- Installing: /<>/include/handlegraph/path_position_handle_graph.hpp -- Installing: /<>/include/handlegraph/path_metadata.hpp -- Installing: /<>/include/handlegraph/path_handle_graph.hpp -- Installing: /<>/include/handlegraph/named_node_back_translation.hpp -- Installing: /<>/include/handlegraph/mutable_path_mutable_handle_graph.hpp -- Installing: /<>/include/handlegraph/mutable_path_metadata.hpp -- Installing: /<>/include/handlegraph/mutable_path_handle_graph.hpp -- Installing: /<>/include/handlegraph/mutable_path_deletable_handle_graph.hpp -- Installing: /<>/include/handlegraph/mutable_handle_graph.hpp -- Installing: /<>/include/handlegraph/iteratee.hpp -- Installing: /<>/include/handlegraph/handle_graph.hpp -- Installing: /<>/include/handlegraph/expanding_overlay_graph.hpp -- Installing: /<>/include/handlegraph/deletable_handle_graph.hpp -- Installing: /<>/include/handlegraph/buildable_snarl_decomposition.hpp -- Installing: /<>/include/handlegraph/algorithms -- Installing: /<>/include/handlegraph/algorithms/weakly_connected_components.hpp -- Installing: /<>/include/handlegraph/algorithms/topological_sort.hpp -- Installing: /<>/include/handlegraph/algorithms/strongly_connected_components.hpp -- Installing: /<>/include/handlegraph/algorithms/split_strands.hpp -- Installing: /<>/include/handlegraph/algorithms/reverse_complement.hpp -- Installing: /<>/include/handlegraph/algorithms/is_single_stranded.hpp -- Installing: /<>/include/handlegraph/algorithms/is_acyclic.hpp -- Installing: /<>/include/handlegraph/algorithms/internal -- Installing: /<>/include/handlegraph/algorithms/internal/dfs.hpp -- Installing: /<>/include/handlegraph/algorithms/find_tips.hpp -- Installing: /<>/include/handlegraph/algorithms/find_shortest_paths.hpp -- Installing: /<>/include/handlegraph/algorithms/extend.hpp -- Installing: /<>/include/handlegraph/algorithms/eades_algorithm.hpp -- Installing: /<>/include/handlegraph/algorithms/dijkstra.hpp -- Installing: /<>/include/handlegraph/algorithms/dagify.hpp -- Installing: /<>/include/handlegraph/algorithms/count_walks.hpp -- Installing: /<>/include/handlegraph/algorithms/copy_graph.hpp -- Installing: /<>/include/handlegraph/algorithms/chop.hpp -- Installing: /<>/include/handlegraph/algorithms/are_equivalent.hpp -- Installing: /<>/include/handlegraph/algorithms/apply_orientations.hpp -- Installing: /<>/include/handlegraph/algorithms/append_graph.hpp -- Installing: /<>/lib/cmake/libhandlegraph/libhandlegraphTargets.cmake -- Installing: /<>/lib/cmake/libhandlegraph/libhandlegraphTargets-noconfig.cmake -- Installing: /<>/lib/cmake/libhandlegraph/libhandlegraphConfig.cmake -- Installing: /<>/lib/cmake/libhandlegraph/libhandlegraphConfigVersion.cmake make[3]: Leaving directory '/<>/deps/libhandlegraph/build' . ./source_me.sh && cp -r deps/gbwtgraph/include/gbwtgraph /<>/include/ && cd deps/gbwtgraph && make clean && make && mv lib/libgbwtgraph.a /<>/lib make[3]: Entering directory '/<>/deps/gbwtgraph' rm -rf bin lib obj rm -f *.o *.a gfa2gbwt cd tests && make clean make[4]: Entering directory '/<>/deps/gbwtgraph/tests' rm -f test_utils test_gbwtgraph test_cached_gbwtgraph test_gfa test_gbz test_minimizer test_index test_algorithms test_path_cover *.o make[4]: Leaving directory '/<>/deps/gbwtgraph/tests' make[3]: Leaving directory '/<>/deps/gbwtgraph' make[3]: Entering directory '/<>/deps/gbwtgraph' mkdir -p bin mkdir -p lib mkdir -p obj /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/algorithms.o src/algorithms.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/cached_gbwtgraph.o src/cached_gbwtgraph.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/gbwtgraph.o src/gbwtgraph.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/gbz.o src/gbz.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/gfa.o src/gfa.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/internal.o src/internal.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/minimizer.o src/minimizer.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/path_cover.o src/path_cover.cpp /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/utils.o src/utils.cpp ar rcs lib/libgbwtgraph.a obj/algorithms.o obj/cached_gbwtgraph.o obj/gbwtgraph.o obj/gbz.o obj/gfa.o obj/internal.o obj/minimizer.o obj/path_cover.o obj/utils.o /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/gfa2gbwt.o src/gfa2gbwt.cpp /usr/bin/riscv64-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -o bin/gfa2gbwt obj/gfa2gbwt.o lib/libgbwtgraph.a -L/<>/lib -lgbwt -lhandlegraph -lsdsl -ldivsufsort -ldivsufsort64 /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/gbz_stats.o src/gbz_stats.cpp /usr/bin/riscv64-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -o bin/gbz_stats obj/gbz_stats.o lib/libgbwtgraph.a -L/<>/lib -lgbwt -lhandlegraph -lsdsl -ldivsufsort -ldivsufsort64 /usr/bin/riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -c -o obj/kmer_freq.o src/kmer_freq.cpp /usr/bin/riscv64-linux-gnu-g++ -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++14 -Wall -Wextra -DNDEBUG -fopenmp -pthread -O3 -ffast-math -funroll-loops -DHAVE_CXA_DEMANGLE -Iinclude -I/<>/include -o bin/kmer_freq obj/kmer_freq.o lib/libgbwtgraph.a -L/<>/lib -lgbwt -lhandlegraph -lsdsl -ldivsufsort -ldivsufsort64 rm obj/kmer_freq.o obj/gbz_stats.o obj/gfa2gbwt.o make[3]: Leaving directory '/<>/deps/gbwtgraph' . ./source_me.sh && cd deps/kff-cpp-api && rm -Rf build && mkdir build && cd build && cmake .. && make && cp kff_io.hpp /<>/include && mv libkff.a /<>/lib -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/riscv64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/riscv64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.4s) -- Generating done (0.0s) -- Build files have been written to: /<>/deps/kff-cpp-api/build make[3]: Entering directory '/<>/deps/kff-cpp-api/build' make[4]: Entering directory '/<>/deps/kff-cpp-api/build' make[5]: Entering directory '/<>/deps/kff-cpp-api/build' make[5]: Leaving directory '/<>/deps/kff-cpp-api/build' make[5]: Entering directory '/<>/deps/kff-cpp-api/build' [ 16%] Building CXX object CMakeFiles/kff.dir/kff_io.cpp.o [ 33%] Linking CXX static library libkff.a make[5]: Leaving directory '/<>/deps/kff-cpp-api/build' [ 33%] Built target kff make[5]: Entering directory '/<>/deps/kff-cpp-api/build' make[5]: Leaving directory '/<>/deps/kff-cpp-api/build' make[5]: Entering directory '/<>/deps/kff-cpp-api/build' [ 50%] Building CXX object CMakeFiles/kff_example.dir/main.cpp.o [ 66%] Linking CXX executable kff_example make[5]: Leaving directory '/<>/deps/kff-cpp-api/build' [ 66%] Built target kff_example make[5]: Entering directory '/<>/deps/kff-cpp-api/build' make[5]: Leaving directory '/<>/deps/kff-cpp-api/build' make[5]: Entering directory '/<>/deps/kff-cpp-api/build' [ 83%] Building CXX object benchmarks/CMakeFiles/reader_bench.dir/reader.cpp.o [100%] Linking CXX executable reader_bench make[5]: Leaving directory '/<>/deps/kff-cpp-api/build' [100%] Built target reader_bench make[4]: Leaving directory '/<>/deps/kff-cpp-api/build' make[3]: Leaving directory '/<>/deps/kff-cpp-api/build' . ./source_me.sh && cd deps/gssw && make && cp lib/libgssw.a /<>/lib/ && cp src/gssw.h /<>/include/ make[3]: Entering directory '/<>/deps/gssw' riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -g -c -o obj/gssw.o src/gssw.c src/gssw.c: In function ‘gssw_graph_print’: src/gssw.c:1947:43: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 1947 | fprintf(stdout, "GRAPH // node %llu %u %s\n", n->id, n->len, n->seq); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu src/gssw.c:1951:41: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 1951 | fprintf(stdout, "GRAPH \"%llu %s\" -> \"%llu %s\";\n", n->prev[k]->id, n->prev[k]->seq, n->id, n->seq); | ~~~^ ~~~~~~~~~~~~~~ | | | | long long unsigned int uint64_t {aka long unsigned int} | %lu src/gssw.c:1951:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 1951 | fprintf(stdout, "GRAPH \"%llu %s\" -> \"%llu %s\";\n", n->prev[k]->id, n->prev[k]->seq, n->id, n->seq); | ~~~^ ~~~~~ | | | | long long unsigned int uint64_t {aka long unsigned int} | %lu src/gssw.c: In function ‘gssw_graph_print_stderr’: src/gssw.c:1963:43: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 1963 | fprintf(stderr, "GRAPH // node %llu %u %s\n", n->id, n->len, n->seq); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu src/gssw.c:1967:41: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 1967 | fprintf(stderr, "GRAPH \"%llu %s\" -> \"%llu %s\";\n", n->prev[k]->id, n->prev[k]->seq, n->id, n->seq); | ~~~^ ~~~~~~~~~~~~~~ | | | | long long unsigned int uint64_t {aka long unsigned int} | %lu src/gssw.c:1967:56: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 5 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 1967 | fprintf(stderr, "GRAPH \"%llu %s\" -> \"%llu %s\";\n", n->prev[k]->id, n->prev[k]->seq, n->id, n->seq); | ~~~^ ~~~~~ | | | | long long unsigned int uint64_t {aka long unsigned int} | %lu src/gssw.c: In function ‘gssw_graph_print_score_matrices’: src/gssw.c:1978:31: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 1978 | fprintf(out, "node %llu\n", n->id); | ~~~^ ~~~~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu src/gssw.c: In function ‘gssw_print_graph_cigar’: src/gssw.c:3623:26: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 3623 | fprintf(out, "%llu[", nc->node->id); | ~~~^ ~~~~~~~~~~~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu src/gssw.c: In function ‘gssw_create_seed_byte’: src/gssw.c:5095:49: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 5095 | fprintf(stderr, "failing is node %llu\n", prev[k]->id); | ~~~^ ~~~~~~~~~~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu src/gssw.c: In function ‘gssw_create_seed_word’: src/gssw.c:5130:49: warning: format ‘%llu’ expects argument of type ‘long long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long unsigned int’} [-Wformat=] 5130 | fprintf(stderr, "failing is node %llu\n", prev[k]->id); | ~~~^ ~~~~~~~~~~~ | | | | | uint64_t {aka long unsigned int} | long long unsigned int | %lu src/gssw.c: In function ‘gssw_sw_software_byte’: src/gssw.c:277:5: warning: ‘__builtin_memcpy’ writing between 18446744071562067984 and 18446744073709551600 bytes into a region of size 9223372036854775807 [-Wstringop-overflow=] 277 | memcpy(scratch, to_unswizzle, size); | ^ In function ‘unswizzle_byte’, inlined from ‘gssw_sw_software_byte’ at src/gssw.c:405:9: src/gssw.c:271:35: note: destination object of size 9223372036854775807 allocated by ‘malloc’ 271 | uint8_t* scratch = (uint8_t*) malloc(size * sizeof(uint8_t)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gssw.c: In function ‘gssw_sw_software_word’: src/gssw.c:1117:5: warning: ‘__builtin_memcpy’ writing between 18446744069414584336 and 18446744073709551600 bytes into a region of size 9223372036854775807 [-Wstringop-overflow=] 1117 | memcpy(scratch, to_unswizzle, size * sizeof(int16_t)); | ^ In function ‘unswizzle_word’, inlined from ‘gssw_sw_software_word’ at src/gssw.c:1249:9: src/gssw.c:1111:35: note: destination object of size 9223372036854775807 allocated by ‘malloc’ 1111 | int16_t* scratch = (int16_t*) malloc(size * sizeof(int16_t)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/gssw.c: In function ‘gssw_node_create’: src/gssw.c:4975:5: warning: ‘__builtin_strncpy’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 4975 | strncpy(n->seq, seq, len); n->seq[len] = 0; | ^ src/gssw.c:4971:19: note: length computed here 4971 | int32_t len = strlen(seq); | ^~~~~~~~~~~ # Make dest directory riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -g src/example.c -o bin/gssw_example obj/gssw.o -lm -lz riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -g src/example_adj.c -o bin/gssw_example_adj obj/gssw.o -lm -lz riscv64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wall -O3 -g src/gssw_test.c -o bin/gssw_test obj/gssw.o -lm -lz ar rvs lib/libgssw.a obj/gssw.o ar: creating lib/libgssw.a a - obj/gssw.o make[3]: Leaving directory '/<>/deps/gssw' . ./source_me.sh && cd ./deps/sonLib && kyotoTycoonLib="" make && cp lib/sonLib.a /<>/lib/libsonlib.a && mkdir -p /<>/include/sonLib && cp lib/*.h /<>/include/sonLib make[3]: Entering directory '/<>/deps/sonLib' cd externalTools && make all make[4]: Entering directory '/<>/deps/sonLib/externalTools' cd cutest && make all make[5]: Entering directory '/<>/deps/sonLib/externalTools/cutest' riscv64-linux-gnu-gcc -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -c CuTest.c ar rc cuTest.a *.o ranlib cuTest.a rm -f *.o mv cuTest.a ../../lib/ cp CuTest.h ../../lib/ make[5]: Leaving directory '/<>/deps/sonLib/externalTools/cutest' cd quicktree_1.1 && make all CC="riscv64-linux-gnu-gcc -std=c99" make[5]: Entering directory '/<>/deps/sonLib/externalTools/quicktree_1.1' riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/align.o ./src/align.c riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/cluster.o ./src/cluster.c riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/distancemat.o ./src/distancemat.c ./src/distancemat.c: In function ‘read_phylip_DistanceMatrix’: ./src/distancemat.c:390:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 390 | fscanf( handle, "%s", identifier ); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/distancemat.c:397:7: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 397 | fscanf( handle, "%lf", &dist); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/options.o ./src/options.c riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/util.o ./src/util.c riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/sequence.o ./src/sequence.c riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/quicktree.o ./src/quicktree.c riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/buildtree.o ./src/buildtree.c riscv64-linux-gnu-gcc -std=c99 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -c -I./include -O3 -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -o ./obj/tree.o ./src/tree.c ./src/tree.c: In function ‘read_newhampshire_Tnode’: ./src/tree.c:393:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 393 | fscanf( handle, "%1s", &c); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/tree.c:406:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 406 | fscanf( handle, "%1s", &c); /* should be , */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/tree.c:417:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 417 | fscanf( handle, "%1s", &c); /* should be ) */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/tree.c:420:5: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 420 | fscanf( handle, "%1s", &c); /* should be : */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/tree.c: In function ‘read_newhampshire_Tree’: ./src/tree.c:468:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 468 | fscanf( handle, "("); | ^~~~~~~~~~~~~~~~~~~~ ./src/tree.c:475:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 475 | fscanf( handle, "%1s", &c ); /* should be , */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/tree.c:484:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 484 | fscanf( handle, "%1s", &c ); /* should be , */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/tree.c:493:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 493 | fscanf( handle, "%1s", &c); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ ./src/tree.c:496:3: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 496 | fscanf( handle, "%1s", &c); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ riscv64-linux-gnu-gcc -std=c99 -Wl,-z,relro -Wl,-z,now -g -o bin/quicktree ./obj/align.o ./obj/cluster.o ./obj/distancemat.o ./obj/options.o ./obj/util.o ./obj/sequence.o ./obj/quicktree.o ./obj/buildtree.o ./obj/tree.o -lm make[5]: Leaving directory '/<>/deps/sonLib/externalTools/quicktree_1.1' make[4]: Leaving directory '/<>/deps/sonLib/externalTools' cd C && make all make[4]: Entering directory '/<>/deps/sonLib/C' cp inc/avl.h ../lib/avl.h.tmp mv ../lib/avl.h.tmp ../lib/avl.h cp inc/bioioC.h ../lib/bioioC.h.tmp mv ../lib/bioioC.h.tmp ../lib/bioioC.h cp inc/commonC.h ../lib/commonC.h.tmp mv ../lib/commonC.h.tmp ../lib/commonC.h cp inc/fastCMaths.h ../lib/fastCMaths.h.tmp mv ../lib/fastCMaths.h.tmp ../lib/fastCMaths.h cp inc/hashTableC.h ../lib/hashTableC.h.tmp mv ../lib/hashTableC.h.tmp ../lib/hashTableC.h cp inc/hashTableC_itr.h ../lib/hashTableC_itr.h.tmp mv ../lib/hashTableC_itr.h.tmp ../lib/hashTableC_itr.h cp inc/hashTablePrivateC.h ../lib/hashTablePrivateC.h.tmp mv ../lib/hashTablePrivateC.h.tmp ../lib/hashTablePrivateC.h cp inc/jsmn.h ../lib/jsmn.h.tmp mv ../lib/jsmn.h.tmp ../lib/jsmn.h cp inc/pairwiseAlignment.h ../lib/pairwiseAlignment.h.tmp mv ../lib/pairwiseAlignment.h.tmp ../lib/pairwiseAlignment.h cp inc/sonLib.h ../lib/sonLib.h.tmp mv ../lib/sonLib.h.tmp ../lib/sonLib.h cp inc/sonLibAlign.h ../lib/sonLibAlign.h.tmp mv ../lib/sonLibAlign.h.tmp ../lib/sonLibAlign.h cp inc/sonLibCache.h ../lib/sonLibCache.h.tmp mv ../lib/sonLibCache.h.tmp ../lib/sonLibCache.h cp inc/sonLibCommon.h ../lib/sonLibCommon.h.tmp mv ../lib/sonLibCommon.h.tmp ../lib/sonLibCommon.h cp inc/sonLibCompression.h ../lib/sonLibCompression.h.tmp mv ../lib/sonLibCompression.h.tmp ../lib/sonLibCompression.h cp inc/sonLibConnectivity.h ../lib/sonLibConnectivity.h.tmp mv ../lib/sonLibConnectivity.h.tmp ../lib/sonLibConnectivity.h cp inc/sonLibEulerTour.h ../lib/sonLibEulerTour.h.tmp mv ../lib/sonLibEulerTour.h.tmp ../lib/sonLibEulerTour.h cp inc/sonLibExcept.h ../lib/sonLibExcept.h.tmp mv ../lib/sonLibExcept.h.tmp ../lib/sonLibExcept.h cp inc/sonLibFile.h ../lib/sonLibFile.h.tmp mv ../lib/sonLibFile.h.tmp ../lib/sonLibFile.h cp inc/sonLibHash.h ../lib/sonLibHash.h.tmp mv ../lib/sonLibHash.h.tmp ../lib/sonLibHash.h cp inc/sonLibKVDatabase.h ../lib/sonLibKVDatabase.h.tmp mv ../lib/sonLibKVDatabase.h.tmp ../lib/sonLibKVDatabase.h cp inc/sonLibKVDatabaseConf.h ../lib/sonLibKVDatabaseConf.h.tmp mv ../lib/sonLibKVDatabaseConf.h.tmp ../lib/sonLibKVDatabaseConf.h cp inc/sonLibList.h ../lib/sonLibList.h.tmp mv ../lib/sonLibList.h.tmp ../lib/sonLibList.h cp inc/sonLibMath.h ../lib/sonLibMath.h.tmp mv ../lib/sonLibMath.h.tmp ../lib/sonLibMath.h cp inc/sonLibNaiveConnectivity.h ../lib/sonLibNaiveConnectivity.h.tmp mv ../lib/sonLibNaiveConnectivity.h.tmp ../lib/sonLibNaiveConnectivity.h cp inc/sonLibRandom.h ../lib/sonLibRandom.h.tmp mv ../lib/sonLibRandom.h.tmp ../lib/sonLibRandom.h cp inc/sonLibSet.h ../lib/sonLibSet.h.tmp mv ../lib/sonLibSet.h.tmp ../lib/sonLibSet.h cp inc/sonLibSortedSet.h ../lib/sonLibSortedSet.h.tmp mv ../lib/sonLibSortedSet.h.tmp ../lib/sonLibSortedSet.h cp inc/sonLibString.h ../lib/sonLibString.h.tmp mv ../lib/sonLibString.h.tmp ../lib/sonLibString.h cp inc/sonLibTreap.h ../lib/sonLibTreap.h.tmp mv ../lib/sonLibTreap.h.tmp ../lib/sonLibTreap.h cp inc/sonLibTree.h ../lib/sonLibTree.h.tmp mv ../lib/sonLibTree.h.tmp ../lib/sonLibTree.h cp inc/sonLibTuples.h ../lib/sonLibTuples.h.tmp mv ../lib/sonLibTuples.h.tmp ../lib/sonLibTuples.h cp inc/sonLibTypes.h ../lib/sonLibTypes.h.tmp mv ../lib/sonLibTypes.h.tmp ../lib/sonLibTypes.h cp inc/stGraph.h ../lib/stGraph.h.tmp mv ../lib/stGraph.h.tmp ../lib/stGraph.h cp inc/stJson.h ../lib/stJson.h.tmp mv ../lib/stJson.h.tmp ../lib/stJson.h cp inc/stMatrix.h ../lib/stMatrix.h.tmp mv ../lib/stMatrix.h.tmp ../lib/stMatrix.h cp inc/stPhylogeny.h ../lib/stPhylogeny.h.tmp mv ../lib/stPhylogeny.h.tmp ../lib/stPhylogeny.h cp inc/stPosetAlignment.h ../lib/stPosetAlignment.h.tmp mv ../lib/stPosetAlignment.h.tmp ../lib/stPosetAlignment.h cp inc/stSafeC.h ../lib/stSafeC.h.tmp mv ../lib/stSafeC.h.tmp ../lib/stSafeC.h cp inc/stSpimapLayer.h ../lib/stSpimapLayer.h.tmp mv ../lib/stSpimapLayer.h.tmp ../lib/stSpimapLayer.h cp inc/stThreadPool.h ../lib/stThreadPool.h.tmp mv ../lib/stThreadPool.h.tmp ../lib/stThreadPool.h cp inc/stUnionFind.h ../lib/stUnionFind.h.tmp mv ../lib/stUnionFind.h.tmp ../lib/stUnionFind.h riscv64-linux-gnu-gcc -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I../externalTools/quicktree_1.1/include/ -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -I inc -I ../lib/ -c impl/*.c cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C impl/bioioC.c: In function ‘parseInt’: impl/bioioC.c:265:23: warning: comparison between pointer and zero character constant [-Wpointer-compare] 265 | while(*string != '\0' && !isspace(**string)) { | ^~ impl/bioioC.c:265:15: note: did you mean to dereference the pointer? 265 | while(*string != '\0' && !isspace(**string)) { | ^ impl/bioioC.c: In function ‘parseFloat’: impl/bioioC.c:286:23: warning: comparison between pointer and zero character constant [-Wpointer-compare] 286 | while(*string != '\0' && !isspace(**string)) { | ^~ impl/bioioC.c:286:15: note: did you mean to dereference the pointer? 286 | while(*string != '\0' && !isspace(**string)) { | ^ impl/bioioC.c: In function ‘parseString’: impl/bioioC.c:307:23: warning: comparison between pointer and zero character constant [-Wpointer-compare] 307 | while(*string != '\0' && !isspace(**string)) { | ^~ impl/bioioC.c:307:15: note: did you mean to dereference the pointer? 307 | while(*string != '\0' && !isspace(**string)) { | ^ cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C impl/sonLibCompression.c: In function ‘stCompression_compress’: impl/sonLibCompression.c:37:9: warning: ‘LZ4_compress’ is deprecated: use LZ4_compress_default() instead [-Wdeprecated-declarations] 37 | int64_t bytesWritten = LZ4_compress(((char*)data) + inputOffset, buffer+(outputOffset+1), subChunk ? ST_LZ4_CHUNK_SIZE : sizeInBytes - inputOffset); | ^~~~~~~ In file included from /usr/include/lz4hc.h:43, from impl/sonLibCompression.c:15: /usr/include/lz4.h:765:75: note: declared here 765 | LZ4_DEPRECATED("use LZ4_compress_default() instead") LZ4LIB_API int LZ4_compress (const char* src, char* dest, int srcSize); | ^~~~~~~~~~~~ impl/sonLibCompression.c: In function ‘stCompression_decompress’: impl/sonLibCompression.c:60:13: warning: ‘LZ4_uncompress’ is deprecated: use LZ4_decompress_fast() instead [-Wdeprecated-declarations] 60 | int64_t bytesRead = LZ4_uncompress(((char *)compressedData)+inputOffset, | ^~~~~~~ /usr/include/lz4.h:773:68: note: declared here 773 | LZ4_DEPRECATED("use LZ4_decompress_fast() instead") LZ4LIB_API int LZ4_uncompress (const char* source, char* dest, int outputSize); | ^~~~~~~~~~~~~~ impl/sonLibCompression.c:72:17: warning: ‘LZ4_uncompress_unknownOutputSize’ is deprecated: use LZ4_decompress_safe() instead [-Wdeprecated-declarations] 72 | int64_t bytesWritten = LZ4_uncompress_unknownOutputSize(((char *)compressedData)+inputOffset, | ^~~~~~~ /usr/include/lz4.h:774:68: note: declared here 774 | LZ4_DEPRECATED("use LZ4_decompress_safe() instead") LZ4LIB_API int LZ4_uncompress_unknownOutputSize (const char* source, char* dest, int isize, int maxOutputSize); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C impl/sonLibConnectivity.c: In function ‘stConnectivity_addEdge’: impl/sonLibConnectivity.c:248:33: warning: pointer ‘component1’ may be used after ‘free’ [-Wuse-after-free] 248 | connectivity->mergeCallback(connectivity->mergeExtraData, component1, component2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘stConnectedComponent_destruct’, inlined from ‘stConnectivity_addEdge’ at impl/sonLibConnectivity.c:238:3: impl/sonLibConnectivity.c:608:9: note: call to ‘free’ here 608 | free(comp); | ^~~~~~~~~~ cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C impl/sonLibTreap.c: In function ‘stTreap_remove’: impl/sonLibTreap.c:331:18: warning: pointer ‘rmnode’ used after ‘free’ [-Wuse-after-free] 331 | stTreap *p = rmnode->parent; | ^ impl/sonLibTreap.c:329:9: note: call to ‘free’ here 329 | free(rmnode); | ^~~~~~~~~~~~ cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C cc1: warning: command-line option ‘-std=c++14’ is valid for C++/ObjC++ but not for C riscv64-linux-gnu-g++ -std=gnu++98 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall -funroll-loops -DNDEBUG -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wl,-z,relro -Wl,-z,now -I inc -I ../lib/ -c impl/*.cpp ar rc sonLib.a *.o ../externalTools/quicktree_1.1/obj/buildtree.o ../externalTools/quicktree_1.1/obj/cluster.o ../externalTools/quicktree_1.1/obj/distancemat.o ../externalTools/quicktree_1.1/obj/options.o ../externalTools/quicktree_1.1/obj/sequence.o ../externalTools/quicktree_1.1/obj/tree.o ../externalTools/quicktree_1.1/obj/util.o ranlib sonLib.a rm *.o mv sonLib.a ../lib/ riscv64-linux-gnu-gcc -std=c99 -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I../externalTools/quicktree_1.1/include/ -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I inc -I ../lib -o ../bin/sonLibTests.tmp tests/allTests.c tests/sonLib*.c tests/st* ../lib/sonLib.a ../lib/cuTest.a -lz -lm -lm -lstdc++ -lpthread -llz4 mv ../bin/sonLibTests.tmp ../bin/sonLibTests riscv64-linux-gnu-gcc -std=c99 -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I../externalTools/quicktree_1.1/include/ -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I inc -I ../lib -I tests -o ../bin/sonLib_kvDatabaseTest.tmp tests/kvDatabaseTest.c tests/kvDatabaseTestCommon.c ../lib/sonLib.a ../lib/cuTest.a -lz -lm -lm mv ../bin/sonLib_kvDatabaseTest.tmp ../bin/sonLib_kvDatabaseTest riscv64-linux-gnu-gcc -std=c99 -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I../externalTools/quicktree_1.1/include/ -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I inc -I ../lib -o ../bin/sonLib_cigarTest.tmp tests/cigarsTest.c ../lib/sonLib.a -lm mv ../bin/sonLib_cigarTest.tmp ../bin/sonLib_cigarTest riscv64-linux-gnu-gcc -std=c99 -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I../externalTools/quicktree_1.1/include/ -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I inc -I ../lib -o ../bin/sonLib_fastaCTest.tmp tests/fastaCTest.c ../lib/sonLib.a -lm mv ../bin/sonLib_fastaCTest.tmp ../bin/sonLib_fastaCTest make[4]: Leaving directory '/<>/deps/sonLib/C' cp sonLib_daemonize.py ./bin/sonLib_daemonize.py chmod +x ./bin/sonLib_daemonize.py make[3]: Leaving directory '/<>/deps/sonLib' . ./source_me.sh && cd ./deps/pinchesAndCacti && make && cd /<>/./deps/sonLib && cp lib/stPinchesAndCacti.a /<>/lib/libpinchesandcacti.a && cp lib/3EdgeConnected.a /<>/lib/lib3edgeconnected.a && mkdir -p /<>/include/sonLib && cp lib/*.h /<>/include/sonLib make[3]: Entering directory '/<>/deps/pinchesAndCacti' cd externalTools && make all make[4]: Entering directory '/<>/deps/pinchesAndCacti/externalTools' cd threeEdgeConnected && make all make[5]: Entering directory '/<>/deps/pinchesAndCacti/externalTools/threeEdgeConnected' riscv64-linux-gnu-gcc -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I ../..//../sonLib/lib/ -c impl/*.c ar rc 3EdgeConnected.a *.o ranlib 3EdgeConnected.a rm *.o mv 3EdgeConnected.a ../..//../sonLib/lib/ cp inc/*.h ../..//../sonLib/lib/ riscv64-linux-gnu-gcc -std=c99 -Wl,-z,relro -Wl,-z,now -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I inc -I../..//../sonLib/lib -o ../..//../sonLib/bin/3EdgeTests tests/*.c ../..//../sonLib/lib/3EdgeConnected.a ../..//../sonLib/lib/sonLib.a ../..//../sonLib/lib/cuTest.a -lz -lm make[5]: Leaving directory '/<>/deps/pinchesAndCacti/externalTools/threeEdgeConnected' make[4]: Leaving directory '/<>/deps/pinchesAndCacti/externalTools' riscv64-linux-gnu-gcc -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I inc -I .//../sonLib/lib/ -c impl/*.c ar rc stPinchesAndCacti.a *.o ranlib stPinchesAndCacti.a rm *.o mv stPinchesAndCacti.a .//../sonLib/lib/ cp inc/*.h .//../sonLib/lib/ riscv64-linux-gnu-gcc -std=c99 -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -g -Wall --pedantic -funroll-loops -DNDEBUG -I /<>/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wl,-z,relro -Wl,-z,now -I inc -I impl -I.//../sonLib/lib -o .//../sonLib/bin/stPinchesAndCactiTests tests/*.c impl/*.c .//../sonLib/lib/sonLib.a .//../sonLib/lib/cuTest.a -lz -lm .//../sonLib/lib/3EdgeConnected.a make[3]: Leaving directory '/<>/deps/pinchesAndCacti' . ./source_me.sh && cd deps/sublinear-Li-Stephens && make clean && INCLUDE_FLAGS="-I/<>/include" make libs && cp lib/libsublinearLS.a /<>/lib/ && mkdir -p /<>/include/sublinearLS && cp src/*.hpp /<>/include/sublinearLS/ make[3]: Entering directory '/<>/deps/sublinear-Li-Stephens' rm -f /<>/deps/sublinear-Li-Stephens/bin/* /<>/deps/sublinear-Li-Stephens/obj/*.o /<>/deps/sublinear-Li-Stephens/obj/test/*.o /<>/deps/sublinear-Li-Stephens/lib/* make[3]: Leaving directory '/<>/deps/sublinear-Li-Stephens' make[3]: Entering directory '/<>/deps/sublinear-Li-Stephens' if [ ! -d /<>/deps/sublinear-Li-Stephens/obj ]; then mkdir -p /<>/deps/sublinear-Li-Stephens/obj; fi if [ ! -d /<>/deps/sublinear-Li-Stephens/obj/test ]; then mkdir -p /<>/deps/sublinear-Li-Stephens/obj/test; fi if [ ! -d /<>/deps/sublinear-Li-Stephens/bin ]; then mkdir -p /<>/deps/sublinear-Li-Stephens/bin; fi if [ ! -d /<>/deps/sublinear-Li-Stephens/lib ]; then mkdir -p /<>/deps/sublinear-Li-Stephens/lib; fi if [ ! -d /<>/deps/sublinear-Li-Stephens/deps ]; then mkdir -p /<>/deps/sublinear-Li-Stephens/deps; fi riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/math.cpp -o /<>/deps/sublinear-Li-Stephens/obj/math.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/reference.cpp -o /<>/deps/sublinear-Li-Stephens/obj/reference.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/probability.cpp -o /<>/deps/sublinear-Li-Stephens/obj/probability.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/input_haplotype.cpp -o /<>/deps/sublinear-Li-Stephens/obj/input_haplotype.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/delay_multiplier.cpp -o /<>/deps/sublinear-Li-Stephens/obj/delay_multiplier.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/DP_map.cpp -o /<>/deps/sublinear-Li-Stephens/obj/DP_map.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/penalty_set.cpp -o /<>/deps/sublinear-Li-Stephens/obj/penalty_set.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -Wno-error=return-type -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/allele.cpp -o /<>/deps/sublinear-Li-Stephens/obj/allele.o /<>/deps/sublinear-Li-Stephens/src/allele.cpp: In function ‘char allele::to_char(alleleValue)’: /<>/deps/sublinear-Li-Stephens/src/allele.cpp:20:1: warning: control reaches end of non-void function [-Wreturn-type] 20 | } | ^ riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/row_set.cpp -o /<>/deps/sublinear-Li-Stephens/obj/row_set.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -Wno-error=return-type -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/haplotype_state_node.cpp -o /<>/deps/sublinear-Li-Stephens/obj/haplotype_state_node.o /<>/deps/sublinear-Li-Stephens/src/haplotype_state_node.cpp: In member function ‘size_t haplotypeStateNode::node_to_child_index(const haplotypeStateNode*) const’: /<>/deps/sublinear-Li-Stephens/src/haplotype_state_node.cpp:96:1: warning: control reaches end of non-void function [-Wreturn-type] 96 | } | ^ riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/haplotype_state_tree.cpp -o /<>/deps/sublinear-Li-Stephens/obj/haplotype_state_tree.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/haplotype_manager.cpp -o /<>/deps/sublinear-Li-Stephens/obj/haplotype_manager.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/set_of_extensions.cpp -o /<>/deps/sublinear-Li-Stephens/obj/set_of_extensions.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=c++11 -g -I/<>/include -L. -L/<>/deps/sublinear-Li-Stephens/deps/htslib/ -lhts -llzma -lbz2 -lz -lm -lpthread -c /<>/deps/sublinear-Li-Stephens/src/reference_sequence.cpp -o /<>/deps/sublinear-Li-Stephens/obj/reference_sequence.o ar rc /<>/deps/sublinear-Li-Stephens/lib/libsublinearLS.a /<>/deps/sublinear-Li-Stephens/obj/math.o /<>/deps/sublinear-Li-Stephens/obj/reference.o /<>/deps/sublinear-Li-Stephens/obj/probability.o /<>/deps/sublinear-Li-Stephens/obj/input_haplotype.o /<>/deps/sublinear-Li-Stephens/obj/delay_multiplier.o /<>/deps/sublinear-Li-Stephens/obj/DP_map.o /<>/deps/sublinear-Li-Stephens/obj/penalty_set.o /<>/deps/sublinear-Li-Stephens/obj/allele.o /<>/deps/sublinear-Li-Stephens/obj/row_set.o /<>/deps/sublinear-Li-Stephens/obj/haplotype_state_node.o /<>/deps/sublinear-Li-Stephens/obj/haplotype_state_tree.o /<>/deps/sublinear-Li-Stephens/obj/haplotype_manager.o /<>/deps/sublinear-Li-Stephens/obj/set_of_extensions.o /<>/deps/sublinear-Li-Stephens/obj/reference_sequence.o ranlib /<>/deps/sublinear-Li-Stephens/lib/libsublinearLS.a make[3]: Leaving directory '/<>/deps/sublinear-Li-Stephens' . ./source_me.sh && cd deps/structures && make clean && make lib/libstructures.a && cp lib/libstructures.a /<>/lib/ && cp -r src/include/structures /<>/include/ make[3]: Entering directory '/<>/deps/structures' if [ ! -d bin ]; then mkdir -p bin; fi if [ ! -d obj ]; then mkdir -p obj; fi if [ ! -d lib ]; then mkdir -p lib; fi find bin obj lib -type f -delete make[3]: Leaving directory '/<>/deps/structures' make[3]: Entering directory '/<>/deps/structures' if [ ! -d bin ]; then mkdir -p bin; fi if [ ! -d obj ]; then mkdir -p obj; fi if [ ! -d lib ]; then mkdir -p lib; fi riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -O3 -Isrc/include -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -c src/union_find.cpp -o obj/union_find.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -O3 -Isrc/include -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -c src/suffix_tree.cpp -o obj/suffix_tree.o riscv64-linux-gnu-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -g -O3 -Isrc/include -I /<>/include -I/<>/include/dynamic -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -c src/stable_double.cpp -o obj/stable_double.o rm -f lib/libstructures.a ar rs lib/libstructures.a obj/union_find.o obj/suffix_tree.o obj/stable_double.o ar: creating lib/libstructures.a make[3]: Leaving directory '/<>/deps/structures' rm -f lib/cleaned_old_protobuf* rm -f lib/libproto* lib/pkgconfig/protobuf* bin/protoc rm -Rf include/google/protobuf deps/protobuf touch lib/cleaned_old_protobuf_v003 rm -f /<>/include/vg.pb.h /<>/include/vg/vg.pb.h rm -Rf /<>/include/vg/io/ . ./source_me.sh && export CXXFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp" && export LDFLAGS="-Wl,-z,relro -Wl,-z,now -L/<>/lib" && cd deps/libvgio && rm -Rf CMakeCache.txt CMakeFiles *.cmake install_manifest.txt *.pb.cc *.pb.h *.a && rm -rf build-vg && mkdir build-vg && cd build-vg && PKG_CONFIG_PATH=/<>/lib/pkgconfig: cmake -DCMAKE_CXX_STANDARD=14 -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_PREFIX_PATH="/usr;/" -DCMAKE_INSTALL_PREFIX=/<> -DCMAKE_INSTALL_LIBDIR=lib .. && make clean && VERBOSE=1 make && make install -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/riscv64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") Building libvgio for C++ 14 -- Found PkgConfig: /usr/bin/riscv64-linux-gnu-pkg-config (found version "1.8.1") -- Could NOT find Protobuf (missing: Protobuf_DIR) No installed Protobuf has registered itself with CMake. -- Found Protobuf: /usr/lib/riscv64-linux-gnu/libprotobuf.so (found version "3.21.12") Found Protobuf using FindProtobuf.cmake -- Found Threads: TRUE Using real Threads library -- Checking for module 'htslib' -- Found htslib, version 1.20 -- Checking for module 'jansson' -- Found jansson, version 2.14 Using installed libhandlegraph -- Configuring done (0.7s) -- Generating done (0.0s) -- Build files have been written to: /<>/deps/libvgio/build-vg make[3]: Entering directory '/<>/deps/libvgio/build-vg' make -f CMakeFiles/Makefile2 clean make[4]: Entering directory '/<>/deps/libvgio/build-vg' make -f CMakeFiles/link_target.dir/build.make CMakeFiles/link_target.dir/clean make[5]: Entering directory '/<>/deps/libvgio/build-vg' /usr/bin/cmake -P CMakeFiles/link_target.dir/cmake_clean.cmake make[5]: Leaving directory '/<>/deps/libvgio/build-vg' make -f CMakeFiles/vgio.dir/build.make CMakeFiles/vgio.dir/clean make[5]: Entering directory '/<>/deps/libvgio/build-vg' /usr/bin/cmake -P CMakeFiles/vgio.dir/cmake_clean.cmake make[5]: Leaving directory '/<>/deps/libvgio/build-vg' make -f CMakeFiles/vgio_static.dir/build.make CMakeFiles/vgio_static.dir/clean make[5]: Entering directory '/<>/deps/libvgio/build-vg' /usr/bin/cmake -P CMakeFiles/vgio_static.dir/cmake_clean.cmake make[5]: Leaving directory '/<>/deps/libvgio/build-vg' make -f CMakeFiles/test_libvgio.dir/build.make CMakeFiles/test_libvgio.dir/clean make[5]: Entering directory '/<>/deps/libvgio/build-vg' /usr/bin/cmake -P 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'/<>/deps/libvgio/build-vg' [ 5%] Building CXX object CMakeFiles/vgio.dir/vg.pb.cc.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/vg.pb.cc.o -MF CMakeFiles/vgio.dir/vg.pb.cc.o.d -o CMakeFiles/vgio.dir/vg.pb.cc.o -c /<>/deps/libvgio/build-vg/vg.pb.cc [ 8%] Building CXX object CMakeFiles/vgio.dir/src/alignment_emitter.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security 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/usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/basic_stream.cpp.o -MF CMakeFiles/vgio.dir/src/basic_stream.cpp.o.d -o CMakeFiles/vgio.dir/src/basic_stream.cpp.o -c /<>/deps/libvgio/src/basic_stream.cpp [ 17%] Building CXX object CMakeFiles/vgio.dir/src/blocked_gzip_input_stream.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/blocked_gzip_input_stream.cpp.o -MF CMakeFiles/vgio.dir/src/blocked_gzip_input_stream.cpp.o.d -o CMakeFiles/vgio.dir/src/blocked_gzip_input_stream.cpp.o -c /<>/deps/libvgio/src/blocked_gzip_input_stream.cpp [ 20%] Building CXX object CMakeFiles/vgio.dir/src/blocked_gzip_output_stream.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/blocked_gzip_output_stream.cpp.o -MF CMakeFiles/vgio.dir/src/blocked_gzip_output_stream.cpp.o.d -o CMakeFiles/vgio.dir/src/blocked_gzip_output_stream.cpp.o -c /<>/deps/libvgio/src/blocked_gzip_output_stream.cpp [ 23%] Building CXX object CMakeFiles/vgio.dir/src/edit.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/edit.cpp.o -MF CMakeFiles/vgio.dir/src/edit.cpp.o.d -o CMakeFiles/vgio.dir/src/edit.cpp.o -c /<>/deps/libvgio/src/edit.cpp [ 26%] Building CXX object CMakeFiles/vgio.dir/src/hfile_cppstream.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/hfile_cppstream.cpp.o -MF CMakeFiles/vgio.dir/src/hfile_cppstream.cpp.o.d -o CMakeFiles/vgio.dir/src/hfile_cppstream.cpp.o -c /<>/deps/libvgio/src/hfile_cppstream.cpp [ 29%] Building CXX object CMakeFiles/vgio.dir/src/json2pb.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/json2pb.cpp.o -MF CMakeFiles/vgio.dir/src/json2pb.cpp.o.d -o CMakeFiles/vgio.dir/src/json2pb.cpp.o -c /<>/deps/libvgio/src/json2pb.cpp [ 32%] Building CXX object CMakeFiles/vgio.dir/src/message_emitter.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/message_emitter.cpp.o -MF CMakeFiles/vgio.dir/src/message_emitter.cpp.o.d -o CMakeFiles/vgio.dir/src/message_emitter.cpp.o -c /<>/deps/libvgio/src/message_emitter.cpp [ 35%] Building CXX object CMakeFiles/vgio.dir/src/message_iterator.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/message_iterator.cpp.o -MF CMakeFiles/vgio.dir/src/message_iterator.cpp.o.d -o CMakeFiles/vgio.dir/src/message_iterator.cpp.o -c /<>/deps/libvgio/src/message_iterator.cpp [ 38%] Building CXX object CMakeFiles/vgio.dir/src/registry.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/registry.cpp.o -MF CMakeFiles/vgio.dir/src/registry.cpp.o.d -o CMakeFiles/vgio.dir/src/registry.cpp.o -c /<>/deps/libvgio/src/registry.cpp [ 41%] Building CXX object CMakeFiles/vgio.dir/src/stream.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/stream.cpp.o -MF CMakeFiles/vgio.dir/src/stream.cpp.o.d -o CMakeFiles/vgio.dir/src/stream.cpp.o -c /<>/deps/libvgio/src/stream.cpp [ 44%] Building CXX object CMakeFiles/vgio.dir/src/stream_multiplexer.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/stream_multiplexer.cpp.o -MF CMakeFiles/vgio.dir/src/stream_multiplexer.cpp.o.d -o CMakeFiles/vgio.dir/src/stream_multiplexer.cpp.o -c /<>/deps/libvgio/src/stream_multiplexer.cpp [ 47%] Building CXX object CMakeFiles/vgio.dir/src/vpkg.cpp.o /usr/bin/riscv64-linux-gnu-g++ -Dvgio_EXPORTS -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fPIC -fopenmp -MD -MT CMakeFiles/vgio.dir/src/vpkg.cpp.o -MF CMakeFiles/vgio.dir/src/vpkg.cpp.o.d -o CMakeFiles/vgio.dir/src/vpkg.cpp.o -c /<>/deps/libvgio/src/vpkg.cpp [ 50%] Linking CXX shared library libvgio.so /usr/bin/cmake -E cmake_link_script CMakeFiles/vgio.dir/link.txt --verbose=1 /usr/bin/riscv64-linux-gnu-g++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -Wl,--dependency-file,CMakeFiles/vgio.dir/link.d -Wl,-z,relro -Wl,-z,now -L/<>/lib -shared -Wl,-soname,libvgio.so -o libvgio.so CMakeFiles/vgio.dir/vg.pb.cc.o CMakeFiles/vgio.dir/src/alignment_emitter.cpp.o CMakeFiles/vgio.dir/src/alignment_io.cpp.o CMakeFiles/vgio.dir/src/basic_stream.cpp.o CMakeFiles/vgio.dir/src/blocked_gzip_input_stream.cpp.o CMakeFiles/vgio.dir/src/blocked_gzip_output_stream.cpp.o CMakeFiles/vgio.dir/src/edit.cpp.o CMakeFiles/vgio.dir/src/hfile_cppstream.cpp.o CMakeFiles/vgio.dir/src/json2pb.cpp.o CMakeFiles/vgio.dir/src/message_emitter.cpp.o CMakeFiles/vgio.dir/src/message_iterator.cpp.o CMakeFiles/vgio.dir/src/registry.cpp.o CMakeFiles/vgio.dir/src/stream.cpp.o CMakeFiles/vgio.dir/src/stream_multiplexer.cpp.o CMakeFiles/vgio.dir/src/vpkg.cpp.o /usr/lib/riscv64-linux-gnu/libprotobuf.so -lhts -ljansson /<>/lib/libhandlegraph.so make[5]: Leaving directory '/<>/deps/libvgio/build-vg' [ 50%] Built target vgio make -f CMakeFiles/vgio_static.dir/build.make CMakeFiles/vgio_static.dir/depend make[5]: Entering directory '/<>/deps/libvgio/build-vg' cd /<>/deps/libvgio/build-vg && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/libvgio /<>/deps/libvgio /<>/deps/libvgio/build-vg /<>/deps/libvgio/build-vg /<>/deps/libvgio/build-vg/CMakeFiles/vgio_static.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/libvgio/build-vg' make -f CMakeFiles/vgio_static.dir/build.make CMakeFiles/vgio_static.dir/build make[5]: Entering directory '/<>/deps/libvgio/build-vg' [ 52%] Building CXX object CMakeFiles/vgio_static.dir/vg.pb.cc.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/vg.pb.cc.o -MF CMakeFiles/vgio_static.dir/vg.pb.cc.o.d -o CMakeFiles/vgio_static.dir/vg.pb.cc.o -c /<>/deps/libvgio/build-vg/vg.pb.cc [ 55%] Building CXX object CMakeFiles/vgio_static.dir/src/alignment_emitter.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/alignment_emitter.cpp.o -MF CMakeFiles/vgio_static.dir/src/alignment_emitter.cpp.o.d -o CMakeFiles/vgio_static.dir/src/alignment_emitter.cpp.o -c /<>/deps/libvgio/src/alignment_emitter.cpp [ 58%] Building CXX object CMakeFiles/vgio_static.dir/src/alignment_io.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/alignment_io.cpp.o -MF CMakeFiles/vgio_static.dir/src/alignment_io.cpp.o.d -o CMakeFiles/vgio_static.dir/src/alignment_io.cpp.o -c /<>/deps/libvgio/src/alignment_io.cpp [ 61%] Building CXX object CMakeFiles/vgio_static.dir/src/basic_stream.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/basic_stream.cpp.o -MF CMakeFiles/vgio_static.dir/src/basic_stream.cpp.o.d -o 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-isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/blocked_gzip_output_stream.cpp.o -MF CMakeFiles/vgio_static.dir/src/blocked_gzip_output_stream.cpp.o.d -o CMakeFiles/vgio_static.dir/src/blocked_gzip_output_stream.cpp.o -c /<>/deps/libvgio/src/blocked_gzip_output_stream.cpp [ 70%] Building CXX object CMakeFiles/vgio_static.dir/src/edit.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/edit.cpp.o -MF CMakeFiles/vgio_static.dir/src/edit.cpp.o.d -o CMakeFiles/vgio_static.dir/src/edit.cpp.o -c /<>/deps/libvgio/src/edit.cpp [ 73%] Building CXX object CMakeFiles/vgio_static.dir/src/hfile_cppstream.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/hfile_cppstream.cpp.o -MF CMakeFiles/vgio_static.dir/src/hfile_cppstream.cpp.o.d -o CMakeFiles/vgio_static.dir/src/hfile_cppstream.cpp.o -c /<>/deps/libvgio/src/hfile_cppstream.cpp [ 76%] Building CXX object CMakeFiles/vgio_static.dir/src/json2pb.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time 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-Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/registry.cpp.o -MF CMakeFiles/vgio_static.dir/src/registry.cpp.o.d -o CMakeFiles/vgio_static.dir/src/registry.cpp.o -c /<>/deps/libvgio/src/registry.cpp [ 88%] Building CXX object CMakeFiles/vgio_static.dir/src/stream.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/libvgio/include -I/<>/deps/libvgio/build-vg -I/<>/deps/libvgio/src -isystem /<>/include -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp -std=gnu++14 -fopenmp -MD -MT CMakeFiles/vgio_static.dir/src/stream.cpp.o -MF CMakeFiles/vgio_static.dir/src/stream.cpp.o.d -o CMakeFiles/vgio_static.dir/src/stream.cpp.o -c /<>/deps/libvgio/src/stream.cpp [ 91%] 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'CMakeFiles/vgio_static.dir/build'. make[5]: Leaving directory '/<>/deps/libvgio/build-vg' [100%] Built target vgio_static make[4]: Leaving directory '/<>/deps/libvgio/build-vg' /usr/bin/cmake -E cmake_progress_start /<>/deps/libvgio/build-vg/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[4]: Entering directory '/<>/deps/libvgio/build-vg' make[4]: Nothing to be done for 'preinstall'. make[4]: Leaving directory '/<>/deps/libvgio/build-vg' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "" -- Installing: /<>/lib/libvgio.so -- Installing: /<>/lib/libvgio.a -- Up-to-date: /<>/include -- Installing: /<>/include/vg -- Installing: /<>/include/vg/io -- Installing: /<>/include/vg/io/vpkg.hpp -- Installing: /<>/include/vg/io/stream_multiplexer.hpp -- Installing: /<>/include/vg/io/stream.hpp -- Installing: /<>/include/vg/io/registry.hpp -- Installing: /<>/include/vg/io/protobuf_iterator.hpp -- Installing: /<>/include/vg/io/protobuf_emitter.hpp -- Installing: /<>/include/vg/io/message_iterator.hpp -- Installing: /<>/include/vg/io/message_emitter.hpp -- Installing: /<>/include/vg/io/loader.hpp -- Installing: /<>/include/vg/io/json2pb.h -- Installing: /<>/include/vg/io/hfile_internal.hpp -- Installing: /<>/include/vg/io/hfile_cppstream.hpp -- Installing: /<>/include/vg/io/gafkluge.hpp -- Installing: /<>/include/vg/io/fdstream.hpp -- Installing: /<>/include/vg/io/edit.hpp -- Installing: /<>/include/vg/io/blocked_gzip_output_stream.hpp -- Installing: /<>/include/vg/io/blocked_gzip_input_stream.hpp -- Installing: /<>/include/vg/io/basic_stream.hpp -- Installing: /<>/include/vg/io/alignment_io.hpp -- Installing: /<>/include/vg/io/alignment_emitter.hpp -- Installing: /<>/include/vg/vg.pb.h -- Installing: /<>/lib/cmake/VGio/VGioTargets.cmake -- Installing: /<>/lib/cmake/VGio/VGioTargets-noconfig.cmake -- Installing: /<>/lib/cmake/VGio/VGioConfig.cmake -- Installing: /<>/lib/cmake/VGio/VGioConfigVersion.cmake make[3]: Leaving directory '/<>/deps/libvgio/build-vg' cp deps/BBHash/BooPHF.h /<>/include cp -r deps/sparsepp/sparsepp include/ rm -Rf include/dynamic.hpp include/dynamic # annoyingly doesn't have an install option on the cmake, so we manually move their external dependency headers cd /<>/deps/DYNAMIC && rm -Rf build && mkdir -p build && cd build && export CXXFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp" && cmake -DCMAKE_VERBOSE_MAKEFILE=ON .. && make CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- Setting build type to 'Release' as none was specified. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/riscv64-linux-gnu-gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/riscv64-linux-gnu-g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done Building in Release mode -- Configuring done (0.4s) -- Generating done (0.0s) -- Build files have been written to: /<>/deps/DYNAMIC/build make[3]: Entering directory '/<>/deps/DYNAMIC/build' /usr/bin/cmake -S/<>/deps/DYNAMIC -B/<>/deps/DYNAMIC/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/deps/DYNAMIC/build/CMakeFiles /<>/deps/DYNAMIC/build//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[4]: Entering directory '/<>/deps/DYNAMIC/build' make -f CMakeFiles/debug.dir/build.make CMakeFiles/debug.dir/depend make[5]: Entering directory '/<>/deps/DYNAMIC/build' cd /<>/deps/DYNAMIC/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/deps/DYNAMIC /<>/deps/DYNAMIC /<>/deps/DYNAMIC/build /<>/deps/DYNAMIC/build /<>/deps/DYNAMIC/build/CMakeFiles/debug.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/<>/deps/DYNAMIC/build' make -f CMakeFiles/debug.dir/build.make CMakeFiles/debug.dir/build make[5]: Entering directory '/<>/deps/DYNAMIC/build' [ 6%] Building CXX object CMakeFiles/debug.dir/debug.cpp.o /usr/bin/riscv64-linux-gnu-g++ -I/<>/deps/DYNAMIC/include -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++14 -O3 -Werror=return-type -ggdb -g -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fopenmp --std=c++11 -O3 -DNDEBUG -ggdb -Ofast -fstrict-aliasing -DNDEBUG -march=native -MD -MT CMakeFiles/debug.dir/debug.cpp.o -MF CMakeFiles/debug.dir/debug.cpp.o.d -o CMakeFiles/debug.dir/debug.cpp.o -c /<>/deps/DYNAMIC/debug.cpp riscv64-linux-gnu-g++: error: ‘-march=native’: ISA string must begin with rv32 or rv64 make[5]: *** [CMakeFiles/debug.dir/build.make:82: CMakeFiles/debug.dir/debug.cpp.o] Error 1 make[5]: Leaving directory '/<>/deps/DYNAMIC/build' make[4]: *** [CMakeFiles/Makefile2:111: CMakeFiles/debug.dir/all] Error 2 make[4]: Leaving directory '/<>/deps/DYNAMIC/build' make[3]: *** [Makefile:94: all] Error 2 make[3]: Leaving directory '/<>/deps/DYNAMIC/build' make[2]: *** [Makefile:607: include/dynamic/dynamic.hpp] Error 2 make[2]: Leaving directory '/<>' dh_auto_build: error: make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=riscv64-linux-gnu-pkg-config CXX=riscv64-linux-gnu-g\+\+ CC=riscv64-linux-gnu-gcc all test/build_graph bin/shuf returned exit code 2 make[1]: *** [debian/rules:39: override_dh_auto_build-arch] Error 25 make[1]: Leaving directory '/<>' make: *** [debian/rules:22: binary-arch] Error 2 dpkg-buildpackage: error: debian/rules binary-arch subprocess returned exit status 2 -------------------------------------------------------------------------------- Build finished at 2024-11-24T21:15:34Z +------------------------------------------------------------------------------+ | Finished Timed Build Commands | +------------------------------------------------------------------------------+ rm -Rf /<>/ ------------------------------------- I: Finished running 'rm -Rf /<>/'. Finished processing commands. -------------------------------------------------------------------------------- Finished -------- +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use E: Build failure (dpkg-buildpackage died) +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: n/a Build-Time: 436 Distribution: unstable Fail-Stage: build Foreign Architectures: riscv64 Host Architecture: riscv64 Install-Time: 36 Job: vg_1.59.0+ds-0.1 Machine Architecture: amd64 Package: vg Package-Time: 499 Source-Version: 1.59.0+ds-0.1 Space: n/a Status: attempted Version: 1.59.0+ds-0.1 -------------------------------------------------------------------------------- Finished at 2024-11-24T21:15:34Z Build needed 00:08:19, no disk space