sbuild (Debian sbuild) 0.81.2+deb11u1 (31 August 2022) on debian-ci-siliconvalley +==============================================================================+ | voronota 1.22.3149-2 (mips64el) Wed, 03 May 2023 11:15:48 +0000 | +==============================================================================+ Package: voronota Version: 1.22.3149-2 Source Version: 1.22.3149-2 Distribution: unstable Machine Architecture: amd64 Host Architecture: mips64el Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any I: NOTICE: Log filtering will replace 'var/run/schroot/mount/sid-amd64-sbuild-07725e85-bdeb-4b9c-a17d-76bdd538667c' with '<>' I: NOTICE: Log filtering will replace 'build/voronota-rkVdkT/resolver-9lcOUf' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://localhost:3142/debian sid InRelease [188 kB] Get:2 http://localhost:3142/debian sid/main Sources.diff/Index [63.6 kB] Get:3 http://localhost:3142/debian sid/main amd64 Packages.diff/Index [63.6 kB] Get:4 http://localhost:3142/debian sid/main Sources T-2023-05-03-0804.18-F-2023-05-03-0206.20.pdiff [7390 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-05-03-0804.18-F-2023-05-03-0206.20.pdiff [1997 B] Get:4 http://localhost:3142/debian sid/main Sources T-2023-05-03-0804.18-F-2023-05-03-0206.20.pdiff [7390 B] Get:5 http://localhost:3142/debian sid/main amd64 Packages T-2023-05-03-0804.18-F-2023-05-03-0206.20.pdiff [1997 B] Get:6 http://localhost:3142/debian sid/main mips64el Packages [9071 kB] Fetched 9395 kB in 2s (3853 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'voronota' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/science-team/voronota.git Please use: git clone https://salsa.debian.org/science-team/voronota.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 1240 kB of source archives. Get:1 http://localhost:3142/debian sid/main voronota 1.22.3149-2 (dsc) [2048 B] Get:2 http://localhost:3142/debian sid/main voronota 1.22.3149-2 (tar) [1233 kB] Get:3 http://localhost:3142/debian sid/main voronota 1.22.3149-2 (diff) [4776 B] Fetched 1240 kB in 0s (21.8 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/voronota-rkVdkT/voronota-1.22.3149' with '<>' I: NOTICE: Log filtering will replace 'build/voronota-rkVdkT' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el Filtered Build-Depends: debhelper-compat (= 13), help2man, libc-dev, libstdc++-dev, build-essential:amd64, fakeroot:amd64, crossbuild-essential-mips64el:amd64, libc-dev:mips64el, libstdc++-dev:mips64el dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [413 B] Get:5 copy:/<>/apt_archive ./ Packages [499 B] Fetched 1869 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils cpp-12-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-11-base:mips64el gcc-12-base:mips64el gcc-12-cross-base-mipsen gcc-12-mips64el-linux-gnuabi64 gcc-12-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libc6:mips64el libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mips64el libgcc-12-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libicu72 libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:mips64el libnsl2:mips64el libpipeline1 libssl3:mips64el libstdc++-11-dev:mips64el libstdc++-12-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf sensible-utils ucf Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales cpp-12-doc cpp-doc dh-make binutils-multiarch g++-12-multilib-mips64el-linux-gnuabi64 gcc-12-doc gcc-12-multilib-mips64el-linux-gnuabi64 manpages-dev flex bison gdb-mips64el-linux-gnuabi64 gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:mips64el libc-l10n:mips64el locales:mips64el libnss-nis:mips64el libnss-nisplus:mips64el manpages-dev:mips64el krb5-doc:mips64el krb5-user:mips64el libstdc++-11-doc:mips64el libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:mips64el libarchive-cpio-perl krb5-locales:mips64el libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-mips64el-linux-gnuabi64 bsdextrautils cpp-12-mips64el-linux-gnuabi64 cpp-mips64el-linux-gnuabi64 cross-config crossbuild-essential-mips64el debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz file g++-12-mips64el-linux-gnuabi64 g++-mips64el-linux-gnuabi64 gcc-11-base:mips64el gcc-12-base:mips64el gcc-12-cross-base-mipsen gcc-12-mips64el-linux-gnuabi64 gcc-12-mips64el-linux-gnuabi64-base gcc-mips64el-linux-gnuabi64 gettext gettext-base groff-base help2man intltool-debian libarchive-zip-perl libatomic1:mips64el libatomic1-mips64el-cross libc6:mips64el libc6-dev:mips64el libc6-dev-mips64el-cross libc6-mips64el-cross libcom-err2:mips64el libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:mips64el libcrypt1:mips64el libdebhelper-perl libdebian-dpkgcross-perl libelf1 libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-11-dev:mips64el libgcc-12-dev-mips64el-cross libgcc-s1:mips64el libgcc-s1-mips64el-cross libgomp1:mips64el libgomp1-mips64el-cross libgssapi-krb5-2:mips64el libicu72 libio-string-perl libk5crypto3:mips64el libkeyutils1:mips64el libkrb5-3:mips64el libkrb5support0:mips64el liblocale-gettext-perl libmagic-mgc libmagic1 libnsl-dev:mips64el libnsl2:mips64el libpipeline1 libssl3:mips64el libstdc++-11-dev:mips64el libstdc++-12-dev-mips64el-cross libstdc++6:mips64el libstdc++6-mips64el-cross libsub-override-perl libtirpc-dev:mips64el libtirpc3:mips64el libtool libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl linux-libc-dev:mips64el linux-libc-dev-mips64el-cross m4 man-db po-debconf sbuild-build-depends-main-dummy:mips64el sensible-utils ucf 0 upgraded, 91 newly installed, 0 to remove and 0 not upgraded. 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libstdc++6-mips64el-cross all 12.2.0-14cross5 [504 kB] Get:33 http://localhost:3142/debian sid/main amd64 linux-libc-dev-mips64el-cross all 6.1.8-1cross2 [1837 kB] Get:34 http://localhost:3142/debian sid/main amd64 libc6-dev-mips64el-cross all 2.36-8cross2 [1572 kB] Get:35 http://localhost:3142/debian sid/main amd64 libstdc++-12-dev-mips64el-cross all 12.2.0-14cross5 [2065 kB] Get:36 http://localhost:3142/debian sid/main amd64 g++-12-mips64el-linux-gnuabi64 amd64 12.2.0-14cross5 [9008 kB] Get:37 http://localhost:3142/debian sid/main amd64 g++-mips64el-linux-gnuabi64 amd64 4:12.2.0-4 [1188 B] Get:38 http://localhost:3142/debian sid/main amd64 libconfig-inifiles-perl all 3.000003-2 [45.9 kB] Get:39 http://localhost:3142/debian sid/main amd64 libio-string-perl all 1.08-4 [12.1 kB] Get:40 http://localhost:3142/debian sid/main amd64 libicu72 amd64 72.1-3 [9376 kB] Get:41 http://localhost:3142/debian sid/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB] Get:42 http://localhost:3142/debian 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Get:53 http://localhost:3142/debian sid/main amd64 crossbuild-essential-mips64el all 12.9 [6740 B] Get:54 http://localhost:3142/debian sid/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB] Get:55 http://localhost:3142/debian sid/main amd64 libtool all 2.4.7-5 [517 kB] Get:56 http://localhost:3142/debian sid/main amd64 dh-autoreconf all 20 [17.1 kB] Get:57 http://localhost:3142/debian sid/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get:58 http://localhost:3142/debian sid/main amd64 libsub-override-perl all 0.09-4 [9304 B] Get:59 http://localhost:3142/debian sid/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get:60 http://localhost:3142/debian sid/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get:61 http://localhost:3142/debian sid/main amd64 libelf1 amd64 0.188-2.1 [174 kB] Get:62 http://localhost:3142/debian sid/main amd64 dwz amd64 0.15-1 [109 kB] Get:63 http://localhost:3142/debian sid/main amd64 gettext amd64 0.21-12 [1300 kB] Get:64 http://localhost:3142/debian sid/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:65 http://localhost:3142/debian sid/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get:66 http://localhost:3142/debian sid/main amd64 debhelper all 13.11.4 [942 kB] Get:67 http://localhost:3142/debian sid/main mips64el gcc-11-base mips64el 11.3.0-12 [38.4 kB] Get:68 http://localhost:3142/debian sid/main mips64el gcc-12-base mips64el 12.2.0-14 [37.5 kB] Get:69 http://localhost:3142/debian sid/main amd64 help2man amd64 1.49.3 [198 kB] Get:70 http://localhost:3142/debian sid/main mips64el libgcc-s1 mips64el 12.2.0-14 [70.5 kB] Get:71 http://localhost:3142/debian sid/main mips64el libc6 mips64el 2.36-9 [2376 kB] Get:72 http://localhost:3142/debian sid/main mips64el libatomic1 mips64el 12.2.0-14 [7444 B] Get:73 http://localhost:3142/debian sid/main mips64el linux-libc-dev mips64el 6.1.25-1 [1761 kB] Get:74 http://localhost:3142/debian sid/main mips64el libcrypt1 mips64el 1:4.4.33-2 [94.0 kB] Get:75 http://localhost:3142/debian sid/main mips64el libcrypt-dev mips64el 1:4.4.33-2 [127 kB] Get:76 http://localhost:3142/debian sid/main mips64el libcom-err2 mips64el 1.47.0-2 [19.6 kB] Get:77 http://localhost:3142/debian sid/main mips64el libkrb5support0 mips64el 1.20.1-1+b1 [30.4 kB] Get:78 http://localhost:3142/debian sid/main mips64el libk5crypto3 mips64el 1.20.1-1+b1 [85.5 kB] Get:79 http://localhost:3142/debian sid/main mips64el libkeyutils1 mips64el 1.6.3-2 [8432 B] Get:80 http://localhost:3142/debian sid/main mips64el libssl3 mips64el 3.0.8-1 [1486 kB] Get:81 http://localhost:3142/debian sid/main mips64el libkrb5-3 mips64el 1.20.1-1+b1 [296 kB] Get:82 http://localhost:3142/debian sid/main mips64el libgssapi-krb5-2 mips64el 1.20.1-1+b1 [117 kB] Get:83 http://localhost:3142/debian sid/main mips64el libtirpc3 mips64el 1.3.3+ds-1 [74.9 kB] Get:84 http://localhost:3142/debian sid/main mips64el libnsl2 mips64el 1.3.0-2 [35.5 kB] Get:85 http://localhost:3142/debian sid/main mips64el libtirpc-dev mips64el 1.3.3+ds-1 [200 kB] Get:86 http://localhost:3142/debian sid/main mips64el libnsl-dev mips64el 1.3.0-2 [70.3 kB] Get:87 http://localhost:3142/debian sid/main mips64el libc6-dev mips64el 2.36-9 [1576 kB] Get:88 http://localhost:3142/debian sid/main mips64el libgomp1 mips64el 12.2.0-14 [104 kB] Get:89 http://localhost:3142/debian sid/main mips64el libgcc-11-dev mips64el 11.3.0-12 [281 kB] Get:90 http://localhost:3142/debian sid/main mips64el libstdc++6 mips64el 12.2.0-14 [546 kB] Get:91 http://localhost:3142/debian sid/main mips64el libstdc++-11-dev mips64el 11.3.0-12 [2004 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 74.6 MB in 0s (176 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 15279 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-5_amd64.deb ... Unpacking liblocale-gettext-perl (1.07-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_amd64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.44-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_amd64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_amd64.deb ... Unpacking gettext-base (0.21-12) ... 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Setting up libc6-mips64el-cross (2.36-8cross2) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libyaml-perl (1.30-2) ... Setting up binutils-mips64el-linux-gnuabi64 (2.40-2cross2) ... Setting up gcc-12-base:mips64el (12.2.0-14) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up autopoint (0.21-12) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up linux-libc-dev-mips64el-cross (6.1.8-1cross2) ... Setting up gcc-12-mips64el-linux-gnuabi64-base:amd64 (12.2.0-14cross5) ... Setting up cpp-12-mips64el-linux-gnuabi64 (12.2.0-14cross5) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up cpp-mips64el-linux-gnuabi64 (4:12.2.0-4) ... Setting up libgomp1-mips64el-cross (12.2.0-14cross5) ... Setting up libgcc-s1-mips64el-cross (12.2.0-14cross5) ... Setting up libelf1:amd64 (0.188-2.1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ... Setting up liblocale-gettext-perl (1.07-5) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libatomic1-mips64el-cross (12.2.0-14cross5) ... Setting up libtool (2.4.7-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up libc6-dev-mips64el-cross (2.36-8cross2) ... Setting up ucf (3.0043+nmu1) ... Setting up libstdc++6-mips64el-cross (12.2.0-14cross5) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libgcc-12-dev-mips64el-cross (12.2.0-14cross5) ... Setting up gcc-12-mips64el-linux-gnuabi64 (12.2.0-14cross5) ... Setting up libstdc++-12-dev-mips64el-cross (12.2.0-14cross5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up g++-12-mips64el-linux-gnuabi64 (12.2.0-14cross5) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up gcc-mips64el-linux-gnuabi64 (4:12.2.0-4) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-1+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up g++-mips64el-linux-gnuabi64 (4:12.2.0-4) ... Setting up debhelper (13.11.4) ... Setting up libxml-simple-perl (2.25-2) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-mips64el (12.9) ... Setting up libgcc-s1:mips64el (12.2.0-14) ... Setting up libc6:mips64el (2.36-9) ... Setting up libstdc++6:mips64el (12.2.0-14) ... Setting up libkeyutils1:mips64el (1.6.3-2) ... Setting up libssl3:mips64el (3.0.8-1) ... Setting up libcrypt1:mips64el (1:4.4.33-2) ... Setting up libcom-err2:mips64el (1.47.0-2) ... Setting up libgomp1:mips64el (12.2.0-14) ... Setting up libkrb5support0:mips64el (1.20.1-1+b1) ... Setting up libatomic1:mips64el (12.2.0-14) ... Setting up libk5crypto3:mips64el (1.20.1-1+b1) ... Setting up libgcc-11-dev:mips64el (11.3.0-12) ... Setting up libcrypt-dev:mips64el (1:4.4.33-2) ... Setting up libkrb5-3:mips64el (1.20.1-1+b1) ... Setting up libgssapi-krb5-2:mips64el (1.20.1-1+b1) ... Setting up libtirpc3:mips64el (1.3.3+ds-1) ... Setting up libtirpc-dev:mips64el (1.3.3+ds-1) ... Setting up libnsl2:mips64el (1.3.0-2) ... Setting up libnsl-dev:mips64el (1.3.0-2) ... Setting up libc6-dev:mips64el (2.36-9) ... Setting up libstdc++-11-dev:mips64el (11.3.0-12) ... Setting up sbuild-build-depends-main-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.36-9) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (mips64el included in any) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) amd64 (x86_64) Toolchain package versions: binutils_2.40-2 dpkg-dev_1.21.21 g++-11_11.3.0-12 g++-12_12.2.0-14 gcc-11_11.3.0-12 gcc-12_12.2.0-14 libc6-dev_2.36-9 libstdc++-11-dev_11.3.0-12 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-mips64el-cross_12.2.0-14cross5 libstdc++6_12.2.0-14 libstdc++6-mips64el-cross_12.2.0-14cross5 linux-libc-dev_6.1.25-1 Package versions: adduser_3.132 apt_2.6.0 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-12 autotools-dev_20220109.1 base-files_12.4 base-passwd_3.6.1 bash_5.2.15-2+b2 binutils_2.40-2 binutils-common_2.40-2 binutils-mips64el-linux-gnuabi64_2.40-2cross2 binutils-x86-64-linux-gnu_2.40-2 bsdextrautils_2.38.1-5+b1 bsdutils_1:2.38.1-5+b1 build-essential_12.9 bzip2_1.0.8-5+b1 coreutils_9.1-1 cpp_4:12.2.0-3 cpp-11_11.3.0-12 cpp-12_12.2.0-14 cpp-12-mips64el-linux-gnuabi64_12.2.0-14cross5 cpp-mips64el-linux-gnuabi64_4:12.2.0-4 cross-config_2.6.20 crossbuild-essential-mips64el_12.9 dash_0.5.12-2 debconf_1.5.82 debhelper_13.11.4 debian-archive-keyring_2023.3 debianutils_5.7-0.4 dh-autoreconf_20 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-4 dpkg_1.21.21 dpkg-cross_2.6.20 dpkg-dev_1.21.21 dwz_0.15-1 e2fsprogs_1.47.0-2 fakeroot_1.31-1.2 file_1:5.44-3 findutils_4.9.0-4 g++_4:12.2.0-3 g++-11_11.3.0-12 g++-12_12.2.0-14 g++-12-mips64el-linux-gnuabi64_12.2.0-14cross5 g++-mips64el-linux-gnuabi64_4:12.2.0-4 gcc_4:12.2.0-3 gcc-11_11.3.0-12 gcc-11-base_11.3.0-12 gcc-12_12.2.0-14 gcc-12-base_12.2.0-14 gcc-12-cross-base-mipsen_12.2.0-14cross5 gcc-12-mips64el-linux-gnuabi64_12.2.0-14cross5 gcc-12-mips64el-linux-gnuabi64-base_12.2.0-14cross5 gcc-9-base_9.5.0-3 gcc-mips64el-linux-gnuabi64_4:12.2.0-4 gettext_0.21-12 gettext-base_0.21-12 gpgv_2.2.40-1.1 grep_3.8-5 groff-base_1.22.4-10 gzip_1.12-1 help2man_1.49.3 hostname_3.23+nmu1 init-system-helpers_1.65.2 intltool-debian_0.35.0+20060710.6 libacl1_2.3.1-3 libapt-pkg6.0_2.6.0 libarchive-zip-perl_1.68-1 libasan6_11.3.0-12 libasan8_12.2.0-14 libatomic1_12.2.0-14 libatomic1-mips64el-cross_12.2.0-14cross5 libattr1_1:2.5.1-4 libaudit-common_1:3.0.9-1 libaudit1_1:3.0.9-1 libbinutils_2.40-2 libblkid1_2.38.1-5+b1 libbz2-1.0_1.0.8-5+b1 libc-bin_2.36-9 libc-dev-bin_2.36-9 libc6_2.36-9 libc6-dev_2.36-9 libc6-dev-mips64el-cross_2.36-8cross2 libc6-mips64el-cross_2.36-8cross2 libcap-ng0_0.8.3-1+b3 libcap2_1:2.66-3 libcc1-0_12.2.0-14 libcom-err2_1.47.0-2 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.33-2 libcrypt1_1:4.4.33-2 libctf-nobfd0_2.40-2 libctf0_2.40-2 libdb5.3_5.3.28+dfsg2-1 libdebconfclient0_0.269 libdebhelper-perl_13.11.4 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.21.21 libelf1_0.188-2.1 libext2fs2_1.47.0-2 libfakeroot_1.31-1.2 libffi8_3.4.4-1 libfile-find-rule-perl_0.34-3 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.13.1-1 libfile-which-perl_1.27-2 libgcc-11-dev_11.3.0-12 libgcc-12-dev_12.2.0-14 libgcc-12-dev-mips64el-cross_12.2.0-14cross5 libgcc-s1_12.2.0-14 libgcc-s1-mips64el-cross_12.2.0-14cross5 libgcrypt20_1.10.1-3 libgdbm-compat4_1.23-3 libgdbm6_1.23-3 libgmp10_2:6.2.1+dfsg1-1.1 libgnutls30_3.7.9-2 libgomp1_12.2.0-14 libgomp1-mips64el-cross_12.2.0-14cross5 libgpg-error0_1.46-1 libgprofng0_2.40-2 libgssapi-krb5-2_1.20.1-1+b1 libhogweed6_3.8.1-2 libicu72_72.1-3 libidn2-0_2.3.3-1+b1 libio-string-perl_1.08-4 libisl23_0.25-1 libitm1_12.2.0-14 libjansson4_2.14-2 libk5crypto3_1.20.1-1+b1 libkeyutils1_1.6.3-2 libkrb5-3_1.20.1-1+b1 libkrb5support0_1.20.1-1+b1 liblocale-gettext-perl_1.07-5 liblsan0_12.2.0-14 liblz4-1_1.9.4-1 liblzma5_5.4.1-0.2 libmagic-mgc_1:5.44-3 libmagic1_1:5.44-3 libmd0_1.0.4-2 libmount1_2.38.1-5+b1 libmpc3_1.3.1-1 libmpfr6_4.2.0-1 libnettle8_3.8.1-2 libnsl-dev_1.3.0-2 libnsl2_1.3.0-2 libnumber-compare-perl_0.03-3 libp11-kit0_0.24.1-2 libpam-modules_1.5.2-6 libpam-modules-bin_1.5.2-6 libpam-runtime_1.5.2-6 libpam0g_1.5.2-6 libpcre2-8-0_10.42-1 libpcre3_2:8.39-15 libperl5.34_5.34.0-5 libperl5.36_5.36.0-7 libpipeline1_1.5.7-1 libquadmath0_12.2.0-14 libseccomp2_2.5.4-1+b3 libselinux1_3.4-1+b5 libsemanage-common_3.4-1 libsemanage2_3.4-1+b5 libsepol2_3.4-2 libsmartcols1_2.38.1-5+b1 libss2_1.47.0-2 libssl3_3.0.8-1 libstdc++-11-dev_11.3.0-12 libstdc++-12-dev_12.2.0-14 libstdc++-12-dev-mips64el-cross_12.2.0-14cross5 libstdc++6_12.2.0-14 libstdc++6-mips64el-cross_12.2.0-14cross5 libsub-override-perl_0.09-4 libsystemd0_252.6-1 libtasn1-6_4.19.0-2 libtext-glob-perl_0.11-3 libtinfo6_6.4-2 libtirpc-common_1.3.3+ds-1 libtirpc-dev_1.3.3+ds-1 libtirpc3_1.3.3+ds-1 libtool_2.4.7-5 libtsan0_11.3.0-12 libtsan2_12.2.0-14 libubsan1_12.2.0-14 libuchardet0_0.0.7-1 libudev1_252.6-1 libunistring2_1.0-2 libuuid1_2.38.1-5+b1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-1+b1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.9.14+dfsg-1.2 libxxhash0_0.8.1-1 libyaml-perl_1.30-2 libzstd1_1.5.4+dfsg2-5 linux-libc-dev_6.1.25-1 linux-libc-dev-mips64el-cross_6.1.8-1cross2 login_1:4.13+dfsg1-1+b1 logsave_1.47.0-2 m4_1.4.19-3 make_4.3-4.1 man-db_2.11.2-2 mawk_1.3.4.20200120-3.1 mount_2.38.1-5+b1 ncurses-base_6.4-2 ncurses-bin_6.4-2 passwd_1:4.13+dfsg1-1+b1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.34_5.34.0-5 perl-modules-5.36_5.36.0-7 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-1 sensible-utils_0.0.17+nmu1 sysvinit-utils_3.06-4 tar_1.34+dfsg-1.2 tzdata_2023c-3 ucf_3.0043+nmu1 usrmerge_35 util-linux_2.38.1-5+b1 util-linux-extra_2.38.1-5+b1 xz-utils_5.4.1-0.2 zlib1g_1:1.2.13.dfsg-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: voronota Binary: voronota Architecture: any Version: 1.22.3149-2 Maintainer: Debian Science Maintainers Uploaders: Andrius Merkys , Homepage: https://bitbucket.org/kliment/voronota Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/science-team/voronota Vcs-Git: https://salsa.debian.org/science-team/voronota.git Testsuite: autopkgtest Testsuite-Triggers: perl Build-Depends: debhelper-compat (= 13), help2man Package-List: voronota deb science optional arch=any Checksums-Sha1: 9ba294a5f33686988757ef2ed6af0f5a5fd3f261 1232680 voronota_1.22.3149.orig.tar.xz e39783fef1054e6e07720d721327e9073b4d664c 4776 voronota_1.22.3149-2.debian.tar.xz Checksums-Sha256: 316e2abfc8741df0ba9b53ff2a27d278d64b74ecafc48d8535b279b0756142e1 1232680 voronota_1.22.3149.orig.tar.xz f105ae591e8558a1666c7321f0164216f57298c29a5c41b2595a23befe81c305 4776 voronota_1.22.3149-2.debian.tar.xz Files: bada4452b903c485b62ce7e43d6852e4 1232680 voronota_1.22.3149.orig.tar.xz 0fa649f016cdaf72e11febbd5e1b3f4c 4776 voronota_1.22.3149-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEdyKS9veshfrgQdQe5fQ/nCc08ocFAmNJZsQSHG1lcmt5c0Bk ZWJpYW4ub3JnAAoJEOX0P5wnNPKHV3UP/iYU6xw4dIi0db0nya/md/sqNtvOQ4vF y3NIJX8IgjUhkodunBwvj3dh7v7+LNhg0DlJNp72DNeyw0on0ujwN2Rc3DrxSAJ9 7mQ6XKhUvtfK7qpNVkuBDvefOM6EAPdQQ5wQxEhndtWMv8AS3NR+lk3QHnoskaZX neCJ7cX2lxUzdFRdW1l7UFq8NSfueZ/1+Pyc0ZNff54YvoUQsfbDHsQNFBjYaQIw ycDt5+iCwveWMKJcPewEJZsU6jifCGqsDAmneHIQcEdlus4fWrJ60LRiV7nrsSfh ykjwOjbbfMHO2b8iCi+GKBD6QpsifxNQqPFUA7QE0CclS2A+mNCplBveV6MeMdQA mFpxdTy5SJuIOR9H9Q1s6DgMbeflGsPGfxiZ+uj+Ik/eVakrkSi0ZeXaTNxpIYUn Hu6mDcgqIast2Fi6WQ3xaSgbHQvMlUP3jjHDa1AE5ErT67hGV971+avzGMPeJ2tP ZRCTiQgKFlR/fW/bf6qn9qz17k4j3+G0VQZLkC+GWgl8vQQRJVikBunbK7zCHQWq ahck3andrlbn8TXgIezG6YGn+FLCWlgLFlND4/L7NDj56cUZKEyM2ibyEjoTXDpl ONc+dTK2dOp5fiM4On4s/0wTXFRk6w9vlUG73Ge+8TURUoyqCSdBfICaEPPIkwjk 7WfV+C2sNKXE =5CES -----END PGP SIGNATURE----- gpgv: Signature made Fri Oct 14 13:40:20 2022 UTC gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./voronota_1.22.3149-2.dsc: no acceptable signature found dpkg-source: info: extracting voronota in /<> dpkg-source: info: unpacking voronota_1.22.3149.orig.tar.xz dpkg-source: info: unpacking voronota_1.22.3149-2.debian.tar.xz Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.mips64el DEB_BUILD_OPTIONS=nocheck HOME=/sbuild-nonexistent LANG=en_US.UTF-8 LC_ALL=C.UTF-8 LOGNAME=crossqa PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=unstable-amd64-sbuild SCHROOT_CHROOT_NAME=sid-amd64-sbuild SCHROOT_COMMAND=env SCHROOT_GID=1000 SCHROOT_GROUP=crossqa SCHROOT_SESSION_ID=sid-amd64-sbuild-07725e85-bdeb-4b9c-a17d-76bdd538667c SCHROOT_UID=1000 SCHROOT_USER=crossqa SHELL=/bin/sh USER=crossqa dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -amips64el -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package voronota dpkg-buildpackage: info: source version 1.22.3149-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-architecture: warning: specified GNU system type mips64el-linux-gnuabi64 does not match CC system type x86_64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture mips64el debian/rules clean dh clean dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a configure.ac:2: installing './install-sh' configure.ac:2: installing './missing' Makefile.am:2: warning: source file 'src/voronota.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled automake: warning: possible forward-incompatibility. automake: At least one source file is in a subdirectory, but the 'subdir-objects' automake: automake option hasn't been enabled. For now, the corresponding output automake: object file(s) will be placed in the top-level directory. However, this automake: behavior may change in a future Automake major version, with object automake: files being placed in the same subdirectory as the corresponding sources. automake: You are advised to start using 'subdir-objects' option throughout your automake: project, to avoid future incompatibilities. Makefile.am:2: warning: source file 'src/modes/mode_calculate_contacts.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_compare_contacts.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_calculate_mock_solvent.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_demo_polygon_triangulation.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_score_contacts_quality.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_contacts_interface_exposure_values.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_split_atoms_file.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_calculate_vertices_in_parallel.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_demo_hypercut.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_score_contacts_global_energy_by_cuts.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_balls.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_calculate_vertices.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_contacts_solvation_values.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_draw_values_bitmap.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_balls_distances.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_contacts_simulating_unfolding.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_demo_ses.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_balls_clashes.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_simulate_potential_for_membrane_proteins.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_vectorize_contact_environments.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_calculate_path_centralities.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_write_balls_to_atoms_file.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_draw_contacts.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_plot_contacts.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_expand_descriptors.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_contacts_depth_values.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_score_scores.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_score_contacts_potentials_stats.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_score_contacts_energy.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_balls_sequences_pairings_stats.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_vectorize_contacts.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_draw_balls.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_vectorize_points.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_rotational_optimization_demo.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_run_script.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_place_membrane.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_score_contacts_energy_stats.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_query_contacts.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_demo_blank.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_compare_files_as_sets.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_score_contacts_potential.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_reprint_hbp.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_write_qa_scores_in_casp_format.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am:2: warning: source file 'src/modes/mode_get_balls_from_atoms_file.cpp' is in a subdirectory, Makefile.am:2: but option 'subdir-objects' is disabled Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/mips64el-linux-gnuabi64 --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --host=mips64el-linux-gnuabi64 configure: loading site script /etc/dpkg-cross/cross-config.mips64el checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for mips64el-linux-gnuabi64-strip... mips64el-linux-gnuabi64-strip checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for mips64el-linux-gnuabi64-g++... mips64el-linux-gnuabi64-g++ checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... yes checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether mips64el-linux-gnuabi64-g++ accepts -g... yes checking for mips64el-linux-gnuabi64-g++ option to enable C++11 features... none needed checking whether make supports the include directive... yes (GNU style) checking dependency style of mips64el-linux-gnuabi64-g++... none checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: executing depfiles commands dh_auto_build -a make -j1 make[1]: Entering directory '/<>' mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o voronota.o `test -f 'src/voronota.cpp' || echo './'`src/voronota.cpp src/voronota.cpp:58:22: warning: ‘template class std::pointer_to_unary_function’ is deprecated [-Wdeprecated-declarations] 58 | typedef std::pointer_to_unary_function FunctionPtr; | ^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/string:48, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/locale_classes.h:40, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/ios_base.h:41, from /usr/mips64el-linux-gnuabi64/include/c++/12/ios:42, from /usr/mips64el-linux-gnuabi64/include/c++/12/ostream:38, from /usr/mips64el-linux-gnuabi64/include/c++/12/iostream:39, from src/voronota.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_function.h:1105:11: note: declared here 1105 | class pointer_to_unary_function : public unary_function<_Arg, _Result> | ^~~~~~~~~~~~~~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_calculate_contacts.o `test -f 'src/modes/mode_calculate_contacts.cpp' || echo './'`src/modes/mode_calculate_contacts.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/string:50, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/locale_classes.h:40, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/ios_base.h:41, from /usr/mips64el-linux-gnuabi64/include/c++/12/ios:42, from /usr/mips64el-linux-gnuabi64/include/c++/12/ostream:38, from /usr/mips64el-linux-gnuabi64/include/c++/12/iostream:39, from src/modes/mode_calculate_contacts.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/../apollota/triangulation.h:191:62: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/tuple.h:5, from src/modes/../apollota/triangulation.h:19, from src/modes/../apollota/constrained_contact_contour.h:7, from src/modes/../apollota/constrained_contacts_construction.h:8, from src/modes/mode_calculate_contacts.cpp:4: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_compare_contacts.o `test -f 'src/modes/mode_compare_contacts.cpp' || echo './'`src/modes/mode_compare_contacts.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_calculate_mock_solvent.o `test -f 'src/modes/mode_calculate_mock_solvent.cpp' || echo './'`src/modes/mode_calculate_mock_solvent.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/string:50, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/locale_classes.h:40, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/ios_base.h:41, from /usr/mips64el-linux-gnuabi64/include/c++/12/ios:42, from /usr/mips64el-linux-gnuabi64/include/c++/12/ostream:38, from /usr/mips64el-linux-gnuabi64/include/c++/12/iostream:39, from src/modes/mode_calculate_mock_solvent.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/../apollota/triangulation.h:191:62: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/tuple.h:5, from src/modes/../apollota/triangulation.h:19, from src/modes/../apollota/triangulation_queries.h:4, from src/modes/mode_calculate_mock_solvent.cpp:4: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_demo_polygon_triangulation.o `test -f 'src/modes/mode_demo_polygon_triangulation.cpp' || echo './'`src/modes/mode_demo_polygon_triangulation.cpp src/modes/mode_demo_polygon_triangulation.cpp: In function ‘std::pair {anonymous}::fit_points_to_positive_canvas(double, std::vector&)’: src/modes/mode_demo_polygon_triangulation.cpp:11:130: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 11 | std::pair fit_points_to_positive_canvas(const double margin, std::vector& points) | ^ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/tuple.h:5, from src/modes/../apollota/simple_polygon_utilities.h:8, from src/modes/mode_demo_polygon_triangulation.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >*, vector > > >; _Distance = long int; _Tp = pair >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter > >]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_score_contacts_quality.o `test -f 'src/modes/mode_score_contacts_quality.cpp' || echo './'`src/modes/mode_score_contacts_quality.cpp In file included from src/modes/mode_score_contacts_quality.cpp:4: src/modes/../common/construction_of_voromqa_score.h: In instantiation of ‘std::pair voronota::common::ConstructionOfVoroMQAScore::BundleOfVoroMQAQualityInformation::global_quality_score_with_weight(const MapOfWeights&, bool) const [with MapOfWeights = std::map]’: src/modes/../common/construction_of_voromqa_score.h:164:43: required from ‘double voronota::common::ConstructionOfVoroMQAScore::BundleOfVoroMQAQualityInformation::global_quality_score(const MapOfWeights&, bool) const [with MapOfWeights = std::map]’ src/modes/mode_score_contacts_quality.cpp:88:42: required from here src/modes/../common/construction_of_voromqa_score.h:135:43: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 135 | std::pair global_quality_score_with_weight(const MapOfWeights& external_weights, bool only_with_weights) const | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_contacts_interface_exposure_values.o `test -f 'src/modes/mode_query_contacts_interface_exposure_values.cpp' || echo './'`src/modes/mode_query_contacts_interface_exposure_values.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_split_atoms_file.o `test -f 'src/modes/mode_split_atoms_file.cpp' || echo './'`src/modes/mode_split_atoms_file.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_calculate_vertices_in_parallel.o `test -f 'src/modes/mode_calculate_vertices_in_parallel.cpp' || echo './'`src/modes/mode_calculate_vertices_in_parallel.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/string:50, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/locale_classes.h:40, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/ios_base.h:41, from /usr/mips64el-linux-gnuabi64/include/c++/12/ios:42, from /usr/mips64el-linux-gnuabi64/include/c++/12/ostream:38, from /usr/mips64el-linux-gnuabi64/include/c++/12/iostream:39, from src/modes/mode_calculate_vertices_in_parallel.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/../apollota/triangulation.h:191:62: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/tuple.h:5, from src/modes/../apollota/triangulation.h:19, from src/modes/mode_calculate_vertices_in_parallel.cpp:9: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_demo_hypercut.o `test -f 'src/modes/mode_demo_hypercut.cpp' || echo './'`src/modes/mode_demo_hypercut.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_score_contacts_global_energy_by_cuts.o `test -f 'src/modes/mode_score_contacts_global_energy_by_cuts.cpp' || echo './'`src/modes/mode_score_contacts_global_energy_by_cuts.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_balls.o `test -f 'src/modes/mode_query_balls.cpp' || echo './'`src/modes/mode_query_balls.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_calculate_vertices.o `test -f 'src/modes/mode_calculate_vertices.cpp' || echo './'`src/modes/mode_calculate_vertices.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/string:50, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/locale_classes.h:40, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/ios_base.h:41, from /usr/mips64el-linux-gnuabi64/include/c++/12/ios:42, from /usr/mips64el-linux-gnuabi64/include/c++/12/ostream:38, from /usr/mips64el-linux-gnuabi64/include/c++/12/iostream:39, from src/modes/mode_calculate_vertices.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/../apollota/triangulation.h:191:62: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/tuple.h:5, from src/modes/../apollota/triangulation.h:19, from src/modes/mode_calculate_vertices.cpp:3: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_contacts_solvation_values.o `test -f 'src/modes/mode_query_contacts_solvation_values.cpp' || echo './'`src/modes/mode_query_contacts_solvation_values.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_draw_values_bitmap.o `test -f 'src/modes/mode_draw_values_bitmap.cpp' || echo './'`src/modes/mode_draw_values_bitmap.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_balls_distances.o `test -f 'src/modes/mode_query_balls_distances.cpp' || echo './'`src/modes/mode_query_balls_distances.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/specfun.h:45, from /usr/mips64el-linux-gnuabi64/include/c++/12/cmath:1935, from src/modes/../apollota/basic_operations_on_points.h:4, from src/modes/../apollota/basic_operations_on_spheres.h:4, from src/modes/mode_query_balls_distances.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/mode_query_balls_distances.cpp:92:47: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_contacts_simulating_unfolding.o `test -f 'src/modes/mode_query_contacts_simulating_unfolding.cpp' || echo './'`src/modes/mode_query_contacts_simulating_unfolding.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_demo_ses.o `test -f 'src/modes/mode_demo_ses.cpp' || echo './'`src/modes/mode_demo_ses.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/vector:60, from src/modes/../apollota/spheres_boundary_construction.h:4, from src/modes/mode_demo_ses.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/../apollota/triangulation.h:191:62: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/tuple.h:5, from src/modes/../apollota/triangulation.h:19, from src/modes/../apollota/triangulation_queries.h:4, from src/modes/mode_demo_ses.cpp:2: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_balls_clashes.o `test -f 'src/modes/mode_query_balls_clashes.cpp' || echo './'`src/modes/mode_query_balls_clashes.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_tree.h:63, from /usr/mips64el-linux-gnuabi64/include/c++/12/set:60, from src/modes/../apollota/search_for_spherical_collisions.h:4, from src/modes/mode_query_balls_clashes.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/mode_query_balls_clashes.cpp:68:63: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/bounding_spheres_hierarchy.h:5, from src/modes/../apollota/search_for_spherical_collisions.h:6: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_simulate_potential_for_membrane_proteins.o `test -f 'src/modes/mode_simulate_potential_for_membrane_proteins.cpp' || echo './'`src/modes/mode_simulate_potential_for_membrane_proteins.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_vectorize_contact_environments.o `test -f 'src/modes/mode_vectorize_contact_environments.cpp' || echo './'`src/modes/mode_vectorize_contact_environments.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_calculate_path_centralities.o `test -f 'src/modes/mode_calculate_path_centralities.cpp' || echo './'`src/modes/mode_calculate_path_centralities.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_write_balls_to_atoms_file.o `test -f 'src/modes/mode_write_balls_to_atoms_file.cpp' || echo './'`src/modes/mode_write_balls_to_atoms_file.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_draw_contacts.o `test -f 'src/modes/mode_draw_contacts.cpp' || echo './'`src/modes/mode_draw_contacts.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_plot_contacts.o `test -f 'src/modes/mode_plot_contacts.cpp' || echo './'`src/modes/mode_plot_contacts.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_expand_descriptors.o `test -f 'src/modes/mode_expand_descriptors.cpp' || echo './'`src/modes/mode_expand_descriptors.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_contacts_depth_values.o `test -f 'src/modes/mode_query_contacts_depth_values.cpp' || echo './'`src/modes/mode_query_contacts_depth_values.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_score_scores.o `test -f 'src/modes/mode_score_scores.cpp' || echo './'`src/modes/mode_score_scores.cpp src/modes/mode_score_scores.cpp: In function ‘std::pair {anonymous}::calc_best_accuracy(const std::map&)’: src/modes/mode_score_scores.cpp:187:119: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 187 | std::pair calc_best_accuracy(const std::map& classification_results_map) | ^ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_score_contacts_potentials_stats.o `test -f 'src/modes/mode_score_contacts_potentials_stats.cpp' || echo './'`src/modes/mode_score_contacts_potentials_stats.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_score_contacts_energy.o `test -f 'src/modes/mode_score_contacts_energy.cpp' || echo './'`src/modes/mode_score_contacts_energy.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_balls_sequences_pairings_stats.o `test -f 'src/modes/mode_query_balls_sequences_pairings_stats.cpp' || echo './'`src/modes/mode_query_balls_sequences_pairings_stats.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_vectorize_contacts.o `test -f 'src/modes/mode_vectorize_contacts.cpp' || echo './'`src/modes/mode_vectorize_contacts.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_draw_balls.o `test -f 'src/modes/mode_draw_balls.cpp' || echo './'`src/modes/mode_draw_balls.cpp In file included from src/modes/../apollota/search_for_spherical_collisions.h:6, from src/modes/mode_draw_balls.cpp:1: src/modes/../apollota/bounding_spheres_hierarchy.h: In instantiation of ‘static std::pair voronota::apollota::BoundingSpheresHierarchy::calc_input_radii_range(const std::vector&) [with SphereType = voronota::apollota::SimpleSphere]’: src/modes/../apollota/bounding_spheres_hierarchy.h:27:44: required from ‘voronota::apollota::BoundingSpheresHierarchy::BoundingSpheresHierarchy(const std::vector&, double, std::size_t) [with InputSphereType = voronota::apollota::SimpleSphere; std::size_t = long unsigned int]’ src/modes/mode_draw_balls.cpp:67:81: required from here src/modes/../apollota/bounding_spheres_hierarchy.h:187:42: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 187 | static std::pair calc_input_radii_range(const std::vector& spheres) | ^~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/bounding_spheres_hierarchy.h:5: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_vectorize_points.o `test -f 'src/modes/mode_vectorize_points.cpp' || echo './'`src/modes/mode_vectorize_points.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_rotational_optimization_demo.o `test -f 'src/modes/mode_rotational_optimization_demo.cpp' || echo './'`src/modes/mode_rotational_optimization_demo.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_run_script.o `test -f 'src/modes/mode_run_script.cpp' || echo './'`src/modes/mode_run_script.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/string:50, from src/modes/../auxiliaries/program_options_handler.h:4, from src/modes/mode_run_script.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = const double&; _T2 = const double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/../scripting/operators/../../common/../apollota/triangulation.h:191:62: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../auxiliaries/program_options_handler.h:11: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_place_membrane.o `test -f 'src/modes/mode_place_membrane.cpp' || echo './'`src/modes/mode_place_membrane.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algo.h:60, from /usr/mips64el-linux-gnuabi64/include/c++/12/algorithm:61, from src/modes/../apollota/tuple.h:5, from src/modes/../apollota/subdivided_icosahedron.h:13, from src/modes/mode_place_membrane.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h: In function ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator*, vector > >; _Distance = long int; _Tp = pair; _Compare = __gnu_cxx::__ops::_Iter_less_iter]’: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_heap.h:224:5: note: the ABI for passing a value containing zero-width fields before an adjacent 64-bit floating-point field was changed in GCC 12.1 224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, | ^~~~~~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_score_contacts_energy_stats.o `test -f 'src/modes/mode_score_contacts_energy_stats.cpp' || echo './'`src/modes/mode_score_contacts_energy_stats.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_query_contacts.o `test -f 'src/modes/mode_query_contacts.cpp' || echo './'`src/modes/mode_query_contacts.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_demo_blank.o `test -f 'src/modes/mode_demo_blank.cpp' || echo './'`src/modes/mode_demo_blank.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_compare_files_as_sets.o `test -f 'src/modes/mode_compare_files_as_sets.cpp' || echo './'`src/modes/mode_compare_files_as_sets.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_score_contacts_potential.o `test -f 'src/modes/mode_score_contacts_potential.cpp' || echo './'`src/modes/mode_score_contacts_potential.cpp In file included from /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_algobase.h:64, from /usr/mips64el-linux-gnuabi64/include/c++/12/string:50, from src/modes/../auxiliaries/program_options_handler.h:4, from src/modes/mode_score_contacts_potential.cpp:1: /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h: In instantiation of ‘constexpr std::pair::type>::__type, typename std::__strip_reference_wrapper::type>::__type> std::make_pair(_T1&&, _T2&&) [with _T1 = double&; _T2 = double&; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp2>::type = double; typename __strip_reference_wrapper::type>::__type = double; typename decay<_Tp>::type = double]’: src/modes/mode_score_contacts_potential.cpp:35:59: required from here /usr/mips64el-linux-gnuabi64/include/c++/12/bits/stl_pair.h:741:5: note: the ABI for returning a value with C++17 empty bases but otherwise an aggregate with only one or two floating-point fields was changed in GCC 12.1 741 | make_pair(_T1&& __x, _T2&& __y) | ^~~~~~~~~ mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_reprint_hbp.o `test -f 'src/modes/mode_reprint_hbp.cpp' || echo './'`src/modes/mode_reprint_hbp.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_write_qa_scores_in_casp_format.o `test -f 'src/modes/mode_write_qa_scores_in_casp_format.cpp' || echo './'`src/modes/mode_write_qa_scores_in_casp_format.cpp mips64el-linux-gnuabi64-g++ -DPACKAGE_NAME=\"voronota\" -DPACKAGE_TARNAME=\"voronota\" -DPACKAGE_VERSION=\"1.22.3149\" -DPACKAGE_STRING=\"voronota\ 1.22.3149\" -DPACKAGE_BUGREPORT=\"kliment@ibt.lt\" -DPACKAGE_URL=\"\" -DPACKAGE=\"voronota\" -DVERSION=\"1.22.3149\" -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mode_get_balls_from_atoms_file.o `test -f 'src/modes/mode_get_balls_from_atoms_file.cpp' || echo './'`src/modes/mode_get_balls_from_atoms_file.cpp mips64el-linux-gnuabi64-g++ -g -O2 -ffile-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o voronota voronota.o mode_calculate_contacts.o mode_compare_contacts.o mode_calculate_mock_solvent.o mode_demo_polygon_triangulation.o mode_score_contacts_quality.o mode_query_contacts_interface_exposure_values.o mode_split_atoms_file.o mode_calculate_vertices_in_parallel.o mode_demo_hypercut.o mode_score_contacts_global_energy_by_cuts.o mode_query_balls.o mode_calculate_vertices.o mode_query_contacts_solvation_values.o mode_draw_values_bitmap.o mode_query_balls_distances.o mode_query_contacts_simulating_unfolding.o mode_demo_ses.o mode_query_balls_clashes.o mode_simulate_potential_for_membrane_proteins.o mode_vectorize_contact_environments.o mode_calculate_path_centralities.o mode_write_balls_to_atoms_file.o mode_draw_contacts.o mode_plot_contacts.o mode_expand_descriptors.o mode_query_contacts_depth_values.o mode_score_scores.o mode_score_contacts_potentials_stats.o mode_score_contacts_energy.o mode_query_balls_sequences_pairings_stats.o mode_vectorize_contacts.o mode_draw_balls.o mode_vectorize_points.o mode_rotational_optimization_demo.o mode_run_script.o mode_place_membrane.o mode_score_contacts_energy_stats.o mode_query_contacts.o mode_demo_blank.o mode_compare_files_as_sets.o mode_score_contacts_potential.o mode_reprint_hbp.o mode_write_qa_scores_in_casp_format.o mode_get_balls_from_atoms_file.o make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a dh_auto_install --destdir=debian/voronota/ -a make -j1 install DESTDIR=/<>/debian/voronota AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/<>' make[2]: Entering directory '/<>' /usr/bin/mkdir -p '/<>/debian/voronota/usr/bin' /usr/bin/install -c voronota '/<>/debian/voronota/usr/bin' /usr/bin/mkdir -p '/<>/debian/voronota/usr/bin' /usr/bin/install -c voronota-resources voronota-voromqa voronota-contacts voronota-cadscore voronota-volumes voronota-pocket voronota-membrane '/<>/debian/voronota/usr/bin' /usr/bin/mkdir -p '/<>/debian/voronota/usr/share/man/man1' /usr/bin/install -c -m 644 'voronota.man' '/<>/debian/voronota/usr/share/man/man1/voronota.1' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installman make[1]: Entering directory '/<>' for BIN in ./voronota-*; \ do \ grep -qle --help ${BIN} && help2man ${BIN} --version-string 1.22.3149 --no-discard-stderr --no-info > ${BIN}.1; \ done dh_installman make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'voronota' in '../voronota_1.22.3149-2_mips64el.deb'. dpkg-deb: building package 'voronota-dbgsym' in '../voronota-dbgsym_1.22.3149-2_mips64el.deb'. dpkg-genbuildinfo --build=any -O../voronota_1.22.3149-2_mips64el.buildinfo dpkg-genchanges --build=any -O../voronota_1.22.3149-2_mips64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2023-05-03T11:23:11Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ voronota_1.22.3149-2_mips64el.changes: -------------------------------------- Format: 1.8 Date: Fri, 14 Oct 2022 09:38:52 -0400 Source: voronota Binary: voronota voronota-dbgsym Built-For-Profiles: cross nocheck Architecture: mips64el Version: 1.22.3149-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Andrius Merkys Description: voronota - Voronoi diagram-based tool to find atom contacts Changes: voronota (1.22.3149-2) unstable; urgency=medium . * Add dependency on bsdextrautils as 'column' is used. * Refresh copyright years. * Set upstream metadata fields: Repository. * Remove obsolete field Name from debian/upstream/metadata (already present in machine-readable debian/copyright). * Override false-positive lintian error. Checksums-Sha1: 2d33d20beafe367c60a45ce36ae8a7dac0ed7889 28675404 voronota-dbgsym_1.22.3149-2_mips64el.deb bdf3341748752d65ec352a558d5f2568adf8f45b 5382 voronota_1.22.3149-2_mips64el.buildinfo 22b70d54b5bc6d41db2986fbbaa984751000dbaa 1926572 voronota_1.22.3149-2_mips64el.deb Checksums-Sha256: bdb190b3b55c30f9abaebf98377f8eeb75cfb8493e1f0f983d0f32ae18c51cb7 28675404 voronota-dbgsym_1.22.3149-2_mips64el.deb 207cb84c4b219da32101f75c1a47e47452a7c69450c967a9666e7766b5cf77fb 5382 voronota_1.22.3149-2_mips64el.buildinfo cc9ddc1ed2852ab960f8fae2808e1d1f617da8b676e5a7f15f428114b0e160b9 1926572 voronota_1.22.3149-2_mips64el.deb Files: 66daf8a0ae3c4530a6d2e9e32bd6a86f 28675404 debug optional voronota-dbgsym_1.22.3149-2_mips64el.deb 2b5b49124e60e5065076660283553ebc 5382 science optional voronota_1.22.3149-2_mips64el.buildinfo a7c7017a4fef61996b68517890534fe6 1926572 science optional voronota_1.22.3149-2_mips64el.deb /<>/voronota_1.22.3149-2_mips64el.changes.new could not be renamed to /<>/voronota_1.22.3149-2_mips64el.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: voronota Binary: voronota voronota-dbgsym Architecture: mips64el Version: 1.22.3149-2 Checksums-Md5: 66daf8a0ae3c4530a6d2e9e32bd6a86f 28675404 voronota-dbgsym_1.22.3149-2_mips64el.deb a7c7017a4fef61996b68517890534fe6 1926572 voronota_1.22.3149-2_mips64el.deb Checksums-Sha1: 2d33d20beafe367c60a45ce36ae8a7dac0ed7889 28675404 voronota-dbgsym_1.22.3149-2_mips64el.deb 22b70d54b5bc6d41db2986fbbaa984751000dbaa 1926572 voronota_1.22.3149-2_mips64el.deb Checksums-Sha256: bdb190b3b55c30f9abaebf98377f8eeb75cfb8493e1f0f983d0f32ae18c51cb7 28675404 voronota-dbgsym_1.22.3149-2_mips64el.deb cc9ddc1ed2852ab960f8fae2808e1d1f617da8b676e5a7f15f428114b0e160b9 1926572 voronota_1.22.3149-2_mips64el.deb Build-Origin: Debian Build-Architecture: amd64 Build-Date: Wed, 03 May 2023 11:23:10 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-12), autotools-dev (= 20220109.1), base-files (= 12.4), base-passwd (= 3.6.1), bash (= 5.2.15-2+b2), binutils (= 2.40-2), binutils-common (= 2.40-2), binutils-x86-64-linux-gnu (= 2.40-2), bsdextrautils (= 2.38.1-5+b1), bsdutils (= 1:2.38.1-5+b1), build-essential (= 12.9), bzip2 (= 1.0.8-5+b1), coreutils (= 9.1-1), cpp (= 4:12.2.0-3), cpp-11 (= 11.3.0-12), cpp-12 (= 12.2.0-14), dash (= 0.5.12-2), debconf (= 1.5.82), debhelper (= 13.11.4), debianutils (= 5.7-0.4), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.13.1-1), diffutils (= 1:3.8-4), dpkg (= 1.21.21), dpkg-dev (= 1.21.21), dwz (= 0.15-1), file (= 1:5.44-3), findutils (= 4.9.0-4), g++ (= 4:12.2.0-3), g++-12 (= 12.2.0-14), gcc (= 4:12.2.0-3), gcc-11 (= 11.3.0-12), gcc-11-base (= 11.3.0-12), gcc-12 (= 12.2.0-14), gcc-12-base (= 12.2.0-14), gettext (= 0.21-12), gettext-base (= 0.21-12), grep (= 3.8-5), groff-base (= 1.22.4-10), gzip (= 1.12-1), help2man (= 1.49.3), hostname (= 3.23+nmu1), init-system-helpers (= 1.65.2), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.1-3), libarchive-zip-perl (= 1.68-1), libasan6 (= 11.3.0-12), libasan8 (= 12.2.0-14), libatomic1 (= 12.2.0-14), libattr1 (= 1:2.5.1-4), libaudit-common (= 1:3.0.9-1), libaudit1 (= 1:3.0.9-1), libbinutils (= 2.40-2), libblkid1 (= 2.38.1-5+b1), libbz2-1.0 (= 1.0.8-5+b1), libc-bin (= 2.36-9), libc-dev-bin (= 2.36-9), libc6 (= 2.36-9), libc6-dev (= 2.36-9), libcap-ng0 (= 0.8.3-1+b3), libcap2 (= 1:2.66-3), libcc1-0 (= 12.2.0-14), libcom-err2 (= 1.47.0-2), libcrypt-dev (= 1:4.4.33-2), libcrypt1 (= 1:4.4.33-2), libctf-nobfd0 (= 2.40-2), libctf0 (= 2.40-2), libdb5.3 (= 5.3.28+dfsg2-1), libdebconfclient0 (= 0.269), libdebhelper-perl (= 13.11.4), libdpkg-perl (= 1.21.21), libelf1 (= 0.188-2.1), libfile-find-rule-perl (= 0.34-3), libfile-stripnondeterminism-perl (= 1.13.1-1), libgcc-11-dev (= 11.3.0-12), libgcc-12-dev (= 12.2.0-14), libgcc-s1 (= 12.2.0-14), libgcrypt20 (= 1.10.1-3), libgdbm-compat4 (= 1.23-3), libgdbm6 (= 1.23-3), libgmp10 (= 2:6.2.1+dfsg1-1.1), libgomp1 (= 12.2.0-14), libgpg-error0 (= 1.46-1), libgprofng0 (= 2.40-2), libgssapi-krb5-2 (= 1.20.1-1+b1), libicu72 (= 72.1-3), libisl23 (= 0.25-1), libitm1 (= 12.2.0-14), libjansson4 (= 2.14-2), libk5crypto3 (= 1.20.1-1+b1), libkeyutils1 (= 1.6.3-2), libkrb5-3 (= 1.20.1-1+b1), libkrb5support0 (= 1.20.1-1+b1), liblocale-gettext-perl (= 1.07-5), liblsan0 (= 12.2.0-14), liblz4-1 (= 1.9.4-1), liblzma5 (= 5.4.1-0.2), libmagic-mgc (= 1:5.44-3), libmagic1 (= 1:5.44-3), libmd0 (= 1.0.4-2), libmount1 (= 2.38.1-5+b1), libmpc3 (= 1.3.1-1), libmpfr6 (= 4.2.0-1), libnsl-dev (= 1.3.0-2), libnsl2 (= 1.3.0-2), libnumber-compare-perl (= 0.03-3), libpam-modules (= 1.5.2-6), libpam-modules-bin (= 1.5.2-6), libpam-runtime (= 1.5.2-6), libpam0g (= 1.5.2-6), libpcre2-8-0 (= 10.42-1), libperl5.36 (= 5.36.0-7), libpipeline1 (= 1.5.7-1), libquadmath0 (= 12.2.0-14), libseccomp2 (= 2.5.4-1+b3), libselinux1 (= 3.4-1+b5), libsmartcols1 (= 2.38.1-5+b1), libssl3 (= 3.0.8-1), libstdc++-12-dev (= 12.2.0-14), libstdc++6 (= 12.2.0-14), libsub-override-perl (= 0.09-4), libsystemd0 (= 252.6-1), libtext-glob-perl (= 0.11-3), libtinfo6 (= 6.4-2), libtirpc-common (= 1.3.3+ds-1), libtirpc-dev (= 1.3.3+ds-1), libtirpc3 (= 1.3.3+ds-1), libtool (= 2.4.7-5), libtsan0 (= 11.3.0-12), libtsan2 (= 12.2.0-14), libubsan1 (= 12.2.0-14), libuchardet0 (= 0.0.7-1), libudev1 (= 252.6-1), libunistring2 (= 1.0-2), libuuid1 (= 2.38.1-5+b1), libxml2 (= 2.9.14+dfsg-1.2), libzstd1 (= 1.5.4+dfsg2-5), linux-libc-dev (= 6.1.25-1), login (= 1:4.13+dfsg1-1+b1), m4 (= 1.4.19-3), make (= 4.3-4.1), man-db (= 2.11.2-2), mawk (= 1.3.4.20200120-3.1), ncurses-base (= 6.4-2), ncurses-bin (= 6.4-2), patch (= 2.7.6-7), perl (= 5.36.0-7), perl-base (= 5.36.0-7), perl-modules-5.36 (= 5.36.0-7), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-1), sensible-utils (= 0.0.17+nmu1), sysvinit-utils (= 3.06-4), tar (= 1.34+dfsg-1.2), usrmerge (= 35), util-linux (= 2.38.1-5+b1), util-linux-extra (= 2.38.1-5+b1), xz-utils (= 5.4.1-0.2), zlib1g (= 1:1.2.13.dfsg-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_US.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1665754732" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ voronota-dbgsym_1.22.3149-2_mips64el.deb ---------------------------------------- new Debian package, version 2.0. size 28675404 bytes: control archive=540 bytes. 394 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: voronota-dbgsym Source: voronota Version: 1.22.3149-2 Auto-Built-Package: debug-symbols Architecture: mips64el Maintainer: Debian Science Maintainers Installed-Size: 29336 Depends: voronota (= 1.22.3149-2) Section: debug Priority: optional Description: debug symbols for voronota Build-Ids: b2f28dfcce9d60ea16e33212d6d5839521009b7c drwxr-xr-x root/root 0 2022-10-14 13:38 ./ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/lib/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/lib/debug/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/lib/debug/.build-id/b2/ -rw-r--r-- root/root 30029512 2022-10-14 13:38 ./usr/lib/debug/.build-id/b2/f28dfcce9d60ea16e33212d6d5839521009b7c.debug drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/share/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/share/doc/ lrwxrwxrwx root/root 0 2022-10-14 13:38 ./usr/share/doc/voronota-dbgsym -> voronota voronota_1.22.3149-2_mips64el.deb --------------------------------- new Debian package, version 2.0. size 1926572 bytes: control archive=1424 bytes. 1265 bytes, 24 lines control 1131 bytes, 17 lines md5sums Package: voronota Version: 1.22.3149-2 Architecture: mips64el Maintainer: Debian Science Maintainers Installed-Size: 12471 Depends: bsdextrautils, libc6 (>= 2.34), libgcc-s1 (>= 3.4), libstdc++6 (>= 11) Section: science Priority: optional Homepage: https://bitbucket.org/kliment/voronota Description: Voronoi diagram-based tool to find atom contacts The analysis of macromolecular structures often requires a comprehensive definition of atomic neighborhoods. Such a definition can be based on the Voronoi diagram of balls, where each ball represents an atom of some van der Waals radius. Voronota is a software tool for finding all the vertices of the Voronoi diagram of balls. Such vertices correspond to the centers of the empty tangent spheres defined by quadruples of balls. Voronota is especially suitable for processing three-dimensional structures of biological macromolecules such as proteins and RNA. . Since version 1.2 Voronota also uses the Voronoi vertices to construct inter-atom contact surfaces and solvent accessible surfaces. Voronota provides tools to query contacts, generate contacts graphics, compare contacts and evaluate quality of protein structural models using contacts. drwxr-xr-x root/root 0 2022-10-14 13:38 ./ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/bin/ -rwxr-xr-x root/root 4655328 2022-10-14 13:38 ./usr/bin/voronota -rwxr-xr-x root/root 15580 2022-10-14 13:38 ./usr/bin/voronota-cadscore -rwxr-xr-x root/root 8316 2022-10-14 13:38 ./usr/bin/voronota-contacts -rwxr-xr-x root/root 6189 2022-10-14 13:38 ./usr/bin/voronota-membrane -rwxr-xr-x root/root 15341 2022-10-14 13:38 ./usr/bin/voronota-pocket -rwxr-xr-x root/root 7978079 2022-10-14 13:38 ./usr/bin/voronota-resources -rwxr-xr-x root/root 4414 2022-10-14 13:38 ./usr/bin/voronota-volumes -rwxr-xr-x root/root 59631 2022-10-14 13:38 ./usr/bin/voronota-voromqa drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/share/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/share/doc/voronota/ -rw-r--r-- root/root 673 2022-10-14 13:38 ./usr/share/doc/voronota/changelog.Debian.gz -rw-r--r-- root/root 1500 2022-10-14 13:16 ./usr/share/doc/voronota/copyright drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/share/man/ drwxr-xr-x root/root 0 2022-10-14 13:38 ./usr/share/man/man1/ -rw-r--r-- root/root 1052 2022-10-14 13:38 ./usr/share/man/man1/voronota-cadscore.1.gz -rw-r--r-- root/root 791 2022-10-14 13:38 ./usr/share/man/man1/voronota-contacts.1.gz -rw-r--r-- root/root 229 2022-10-14 13:38 ./usr/share/man/man1/voronota-membrane.1.gz -rw-r--r-- root/root 228 2022-10-14 13:38 ./usr/share/man/man1/voronota-pocket.1.gz -rw-r--r-- root/root 589 2022-10-14 13:38 ./usr/share/man/man1/voronota-volumes.1.gz -rw-r--r-- root/root 808 2022-10-14 13:38 ./usr/share/man/man1/voronota-voromqa.1.gz -rw-r--r-- root/root 1065 2022-10-14 13:38 ./usr/share/man/man1/voronota.1.gz lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:amd64 Filtered Build-Depends: lintian:amd64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [963 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [542 B] Get:5 copy:/<>/apt_archive ./ Packages [630 B] Fetched 2135 B in 0s (0 B/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8 libregexp-ipv6-perl libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:mips64el t1utils unzip 0 upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 13.7 MB of archives. After this operation, 51.4 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [852 B] Get:2 http://localhost:3142/debian sid/main amd64 netbase all 6.4 [12.8 kB] Get:3 http://localhost:3142/debian sid/main amd64 readline-common all 8.2-1.3 [69.0 kB] Get:4 http://localhost:3142/debian sid/main amd64 openssl amd64 3.0.8-1 [1407 kB] Get:5 http://localhost:3142/debian sid/main amd64 ca-certificates all 20230311 [153 kB] Get:6 http://localhost:3142/debian sid/main amd64 diffstat amd64 1.65-1 [33.3 kB] Get:7 http://localhost:3142/debian sid/main amd64 libassuan0 amd64 2.5.5-5 [48.5 kB] Get:8 http://localhost:3142/debian sid/main amd64 libreadline8 amd64 8.2-1.3 [166 kB] Get:9 http://localhost:3142/debian sid/main amd64 gpgconf amd64 2.2.40-1.1 [564 kB] Get:10 http://localhost:3142/debian sid/main amd64 libsqlite3-0 amd64 3.40.1-2 [837 kB] Get:11 http://localhost:3142/debian sid/main amd64 gpg amd64 2.2.40-1.1 [949 kB] Get:12 http://localhost:3142/debian sid/main amd64 iso-codes all 4.15.0-1 [2906 kB] Get:13 http://localhost:3142/debian sid/main amd64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://localhost:3142/debian sid/main amd64 libapt-pkg-perl amd64 0.1.40+b2 [69.2 kB] Get:15 http://localhost:3142/debian sid/main amd64 libb-hooks-op-check-perl amd64 0.22-2+b1 [10.5 kB] Get:16 http://localhost:3142/debian sid/main amd64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://localhost:3142/debian sid/main amd64 libdevel-callchecker-perl amd64 0.008-2 [15.8 kB] Get:18 http://localhost:3142/debian sid/main amd64 libparams-classify-perl amd64 0.015-2+b1 [23.1 kB] Get:19 http://localhost:3142/debian sid/main amd64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://localhost:3142/debian sid/main amd64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://localhost:3142/debian sid/main amd64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://localhost:3142/debian sid/main amd64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://localhost:3142/debian sid/main amd64 libvariable-magic-perl amd64 0.63-1+b1 [44.0 kB] Get:24 http://localhost:3142/debian sid/main amd64 libb-hooks-endofscope-perl all 0.26-1 [19.6 kB] Get:25 http://localhost:3142/debian sid/main amd64 libberkeleydb-perl amd64 0.64-2+b1 [123 kB] Get:26 http://localhost:3142/debian sid/main amd64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://localhost:3142/debian sid/main amd64 libhtml-tagset-perl all 3.20-6 [11.7 kB] Get:28 http://localhost:3142/debian sid/main amd64 libregexp-ipv6-perl all 0.03-3 [5212 B] Get:29 http://localhost:3142/debian sid/main amd64 liburi-perl all 5.17-1 [90.4 kB] Get:30 http://localhost:3142/debian sid/main amd64 libhtml-parser-perl amd64 3.81-1 [101 kB] Get:31 http://localhost:3142/debian sid/main amd64 libcgi-pm-perl all 4.55-1 [220 kB] Get:32 http://localhost:3142/debian sid/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:33 http://localhost:3142/debian sid/main amd64 libclass-method-modifiers-perl all 2.14-1 [18.1 kB] Get:34 http://localhost:3142/debian sid/main amd64 libclass-xsaccessor-perl amd64 1.19-4+b1 [36.4 kB] Get:35 http://localhost:3142/debian sid/main amd64 libclone-perl amd64 0.46-1 [13.7 kB] Get:36 http://localhost:3142/debian sid/main amd64 libconfig-tiny-perl all 2.28-2 [16.4 kB] Get:37 http://localhost:3142/debian sid/main amd64 libparams-util-perl amd64 1.102-2+b1 [24.8 kB] Get:38 http://localhost:3142/debian sid/main amd64 libsub-install-perl all 0.929-1 [10.5 kB] Get:39 http://localhost:3142/debian sid/main amd64 libdata-optlist-perl all 0.113-1 [10.6 kB] Get:40 http://localhost:3142/debian sid/main amd64 libsub-exporter-perl all 0.989-1 [50.5 kB] Get:41 http://localhost:3142/debian sid/main amd64 libconst-fast-perl all 0.014-2 [8792 B] Get:42 http://localhost:3142/debian sid/main amd64 libcpanel-json-xs-perl amd64 4.35-1 [131 kB] Get:43 http://localhost:3142/debian sid/main amd64 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB] Get:44 http://localhost:3142/debian sid/main amd64 libexception-class-perl all 1.45-1 [34.6 kB] Get:45 http://localhost:3142/debian sid/main amd64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:46 http://localhost:3142/debian sid/main amd64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:47 http://localhost:3142/debian sid/main amd64 libdata-dpath-perl all 0.58-2 [43.6 kB] Get:48 http://localhost:3142/debian sid/main amd64 libdata-messagepack-perl amd64 1.02-1+b1 [35.2 kB] Get:49 http://localhost:3142/debian sid/main amd64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:50 http://localhost:3142/debian sid/main amd64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:51 http://localhost:3142/debian sid/main amd64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:52 http://localhost:3142/debian sid/main amd64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:53 http://localhost:3142/debian sid/main amd64 libnetaddr-ip-perl amd64 4.079+dfsg-2+b1 [99.5 kB] Get:54 http://localhost:3142/debian sid/main amd64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:55 http://localhost:3142/debian sid/main amd64 libdata-validate-uri-perl all 0.07-2 [11.2 kB] Get:56 http://localhost:3142/debian sid/main amd64 libdevel-size-perl amd64 0.83-2+b1 [24.3 kB] Get:57 http://localhost:3142/debian sid/main amd64 libemail-address-xs-perl amd64 1.05-1+b1 [29.4 kB] Get:58 http://localhost:3142/debian sid/main amd64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:59 http://localhost:3142/debian sid/main amd64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:60 http://localhost:3142/debian sid/main amd64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:61 http://localhost:3142/debian sid/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:62 http://localhost:3142/debian sid/main amd64 libhttp-date-perl all 6.05-2 [10.5 kB] Get:63 http://localhost:3142/debian sid/main amd64 libfile-listing-perl all 6.15-1 [12.6 kB] Get:64 http://localhost:3142/debian sid/main amd64 libfont-ttf-perl all 1.06-2 [318 kB] Get:65 http://localhost:3142/debian sid/main amd64 libio-html-perl all 1.004-3 [16.2 kB] Get:66 http://localhost:3142/debian sid/main amd64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:67 http://localhost:3142/debian sid/main amd64 libhttp-message-perl all 6.44-1 [81.7 kB] Get:68 http://localhost:3142/debian sid/main amd64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:69 http://localhost:3142/debian sid/main amd64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:70 http://localhost:3142/debian sid/main amd64 libhtml-tree-perl all 5.07-3 [211 kB] Get:71 http://localhost:3142/debian sid/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get:72 http://localhost:3142/debian sid/main amd64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:73 http://localhost:3142/debian sid/main amd64 perl-openssl-defaults amd64 7+b1 [7924 B] Get:74 http://localhost:3142/debian sid/main amd64 libnet-ssleay-perl amd64 1.92-2+b1 [317 kB] Get:75 http://localhost:3142/debian sid/main amd64 libio-socket-ssl-perl all 2.081-2 [219 kB] Get:76 http://localhost:3142/debian sid/main amd64 libnet-http-perl all 6.22-1 [25.3 kB] Get:77 http://localhost:3142/debian sid/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get:78 http://localhost:3142/debian sid/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:79 http://localhost:3142/debian sid/main amd64 libwww-perl all 6.68-1 [186 kB] Get:80 http://localhost:3142/debian sid/main amd64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:81 http://localhost:3142/debian sid/main amd64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:82 http://localhost:3142/debian sid/main amd64 libio-interactive-perl all 1.023-2 [11.0 kB] Get:83 http://localhost:3142/debian sid/main amd64 libipc-run3-perl all 0.048-3 [33.2 kB] Get:84 http://localhost:3142/debian sid/main amd64 libjson-maybexs-perl all 1.004004-1 [13.3 kB] Get:85 http://localhost:3142/debian sid/main amd64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:86 http://localhost:3142/debian sid/main amd64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:87 http://localhost:3142/debian sid/main amd64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:88 http://localhost:3142/debian sid/main amd64 liblz1 amd64 1.13-5 [37.7 kB] Get:89 http://localhost:3142/debian sid/main amd64 liblzo2-2 amd64 2.10-2 [56.9 kB] Get:90 http://localhost:3142/debian sid/main amd64 libmarkdown2 amd64 2.2.7-2 [37.0 kB] Get:91 http://localhost:3142/debian sid/main amd64 libmldbm-perl all 2.05-4 [16.8 kB] Get:92 http://localhost:3142/debian sid/main amd64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:93 http://localhost:3142/debian sid/main amd64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:94 http://localhost:3142/debian sid/main amd64 libmoo-perl all 2.005005-1 [58.0 kB] Get:95 http://localhost:3142/debian sid/main amd64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:96 http://localhost:3142/debian sid/main amd64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:97 http://localhost:3142/debian sid/main amd64 libmouse-perl amd64 2.5.10-1+b3 [170 kB] Get:98 http://localhost:3142/debian sid/main amd64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:99 http://localhost:3142/debian sid/main amd64 libsub-identify-perl amd64 0.14-3 [10.9 kB] Get:100 http://localhost:3142/debian sid/main amd64 libsub-name-perl amd64 0.26-2+b1 [12.6 kB] Get:101 http://localhost:3142/debian sid/main amd64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:102 http://localhost:3142/debian sid/main amd64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:103 http://localhost:3142/debian sid/main amd64 libperlio-gzip-perl amd64 0.20-1+b1 [17.3 kB] Get:104 http://localhost:3142/debian sid/main amd64 libperlio-utf8-strict-perl amd64 0.010-1 [11.4 kB] Get:105 http://localhost:3142/debian sid/main amd64 libproc-processtable-perl amd64 0.634-1+b2 [43.1 kB] Get:106 http://localhost:3142/debian sid/main amd64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:107 http://localhost:3142/debian sid/main amd64 libsereal-decoder-perl amd64 5.003+ds-1 [99.5 kB] Get:108 http://localhost:3142/debian sid/main amd64 libsereal-encoder-perl amd64 5.003+ds-1 [102 kB] Get:109 http://localhost:3142/debian sid/main amd64 libsort-versions-perl all 1.62-3 [8928 B] Get:110 http://localhost:3142/debian sid/main amd64 libxs-parse-keyword-perl amd64 0.33-1 [58.4 kB] Get:111 http://localhost:3142/debian sid/main amd64 libsyntax-keyword-try-perl amd64 0.28-1 [28.6 kB] Get:112 http://localhost:3142/debian sid/main amd64 libterm-readkey-perl amd64 2.38-2+b1 [24.5 kB] Get:113 http://localhost:3142/debian sid/main amd64 libtext-levenshteinxs-perl amd64 0.03-5+b1 [8404 B] Get:114 http://localhost:3142/debian sid/main amd64 libtext-markdown-discount-perl amd64 0.16-1 [13.0 kB] Get:115 http://localhost:3142/debian sid/main amd64 libtext-xslate-perl amd64 3.5.9-1+b2 [198 kB] Get:116 http://localhost:3142/debian sid/main amd64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:117 http://localhost:3142/debian sid/main amd64 libtime-moment-perl amd64 0.44-2+b1 [73.0 kB] Get:118 http://localhost:3142/debian sid/main amd64 libunicode-utf8-perl amd64 0.62-2 [20.2 kB] Get:119 http://localhost:3142/debian sid/main amd64 libwww-mechanize-perl all 2.16-1 [116 kB] Get:120 http://localhost:3142/debian sid/main amd64 libyaml-0-2 amd64 0.2.5-1 [53.6 kB] Get:121 http://localhost:3142/debian sid/main amd64 libyaml-libyaml-perl amd64 0.86+ds-1 [34.4 kB] Get:122 http://localhost:3142/debian sid/main amd64 plzip amd64 1.10-5 [61.9 kB] Get:123 http://localhost:3142/debian sid/main amd64 lzop amd64 1.04-2 [84.2 kB] Get:124 http://localhost:3142/debian sid/main amd64 patchutils amd64 0.4.2-1 [77.5 kB] Get:125 http://localhost:3142/debian sid/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get:126 http://localhost:3142/debian sid/main amd64 unzip amd64 6.0-28 [166 kB] Get:127 http://localhost:3142/debian sid/main amd64 lintian all 2.116.3 [1130 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 13.7 MB in 0s (154 MB/s) Selecting previously unselected package netbase. (Reading database ... 21319 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.0.8-1_amd64.deb ... Unpacking openssl (3.0.8-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20230311_all.deb ... Unpacking ca-certificates (20230311) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.65-1_amd64.deb ... Unpacking diffstat (1.65-1) ... Selecting previously unselected package libassuan0:amd64. Preparing to unpack .../005-libassuan0_2.5.5-5_amd64.deb ... Unpacking libassuan0:amd64 (2.5.5-5) ... Selecting previously unselected package libreadline8:amd64. 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Setting up libapt-pkg-perl (0.1.40+b2) ... Setting up liblz1:amd64 (1.13-5) ... Setting up libberkeleydb-perl:amd64 (0.64-2+b1) ... Setting up plzip (1.10-5) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2) ... Setting up libmouse-perl (2.5.10-1+b3) ... Setting up libdata-messagepack-perl (1.02-1+b1) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libclass-method-modifiers-perl (2.14-1) ... Setting up liblist-compare-perl (0.55-2) ... Setting up libclone-perl:amd64 (0.46-1) ... Setting up libyaml-0-2:amd64 (0.2.5-1) ... Setting up libsub-identify-perl (0.14-3) ... Setting up libcpanel-json-xs-perl:amd64 (4.35-1) ... Setting up libhtml-tagset-perl (3.20-6) ... Setting up libdevel-size-perl (0.83-2+b1) ... Setting up unzip (6.0-28) ... Setting up libsqlite3-0:amd64 (3.40.1-2) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libyaml-libyaml-perl (0.86+ds-1) ... Setting up libio-interactive-perl (1.023-2) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:amd64 (7+b1) ... Setting up libmldbm-perl (2.05-4) ... Setting up liblzo2-2:amd64 (2.10-2) ... Setting up libtime-moment-perl (0.44-2+b1) ... Setting up libencode-locale-perl (1.05-3) ... Setting up libassuan0:amd64 (2.5.5-5) ... Setting up libconfig-tiny-perl (2.28-2) ... Setting up libsereal-encoder-perl (5.003+ds-1) ... Setting up liblist-utilsby-perl (0.12-2) ... Setting up libnet-netmask-perl (2.0002-2) ... Setting up libsub-install-perl (0.929-1) ... Setting up patchutils (0.4.2-1) ... Setting up libjson-maybexs-perl (1.004004-1) ... Setting up libnetaddr-ip-perl (4.079+dfsg-2+b1) ... 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Setting up libproc-processtable-perl:amd64 (0.634-1+b2) ... Setting up libpath-tiny-perl (0.144-1) ... Setting up lzop (1.04-2) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libipc-run3-perl (0.048-3) ... Setting up libregexp-wildcards-perl (1.05-3) ... Setting up libaliased-perl (0.34-3) ... Setting up netbase (6.4) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006008-1) ... Setting up libdevel-stacktrace-perl (2.0400-2) ... Setting up libclass-xsaccessor-perl (1.19-4+b1) ... Setting up libsort-versions-perl (1.62-3) ... Setting up libterm-readkey-perl (2.38-2+b1) ... Setting up libfont-ttf-perl (1.06-2) ... Setting up openssl (3.0.8-1) ... Setting up libtext-levenshteinxs-perl (0.03-5+b1) ... Setting up libperlio-gzip-perl (0.20-1+b1) ... Setting up readline-common (8.2-1.3) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.003+ds-1) ... Setting up libmarkdown2:amd64 (2.2.7-2) ... Setting up liburi-perl (5.17-1) ... Setting up iso-codes (4.15.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b1) ... Setting up libnet-ssleay-perl:amd64 (1.92-2+b1) ... Setting up libhttp-date-perl (6.05-2) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.15-1) ... Setting up libreadline8:amd64 (8.2-1.3) ... Setting up libnet-http-perl (6.22-1) ... Setting up libtext-markdown-discount-perl (0.16-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:amd64 (0.008-2) ... Setting up ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 140 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-2) ... Setting up libdata-optlist-perl (0.113-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:amd64 (3.81-1) ... Setting up gpgconf (2.2.40-1.1) ... Setting up libio-socket-ssl-perl (2.081-2) ... Setting up gpg (2.2.40-1.1) ... Setting up libsub-exporter-perl (0.989-1) ... Setting up libhttp-message-perl (6.44-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:amd64 (0.015-2+b1) ... Setting up libcgi-pm-perl (4.55-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.58-2) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.26-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.68-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.16-1) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up lintian (2.116.3) ... Setting up sbuild-build-depends-lintian-dummy:mips64el (0.invalid.0) ... Processing triggers for libc-bin (2.36-9) ... Processing triggers for man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20230311) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build Profiles: cross nocheck Build Type: any Build-Space: 427548 Build-Time: 424 Distribution: unstable Foreign Architectures: mips64el Host Architecture: mips64el Install-Time: 9 Job: voronota_1.22.3149-2 Lintian: pass Machine Architecture: amd64 Package: voronota Package-Time: 443 Source-Version: 1.22.3149-2 Space: 427548 Status: successful Version: 1.22.3149-2 -------------------------------------------------------------------------------- Finished at 2023-05-03T11:23:11Z Build needed 00:07:23, 427548k disk space