sbuild (Debian sbuild) 0.85.0 (04 January 2023) on mjolnir.einval.org +==============================================================================+ | wtdbg2 2.5-10 (amd64) Mon, 17 Jun 2024 16:29:31 +0000 | +==============================================================================+ Package: wtdbg2 Version: 2.5-10 Source Version: 2.5-10 Distribution: unstable Machine Architecture: arm64 Host Architecture: amd64 Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Unpacking /home/helmut/.cache/sbuild/unstable-arm64-sbuild.tar.zst to /tmp/tmp.sbuild.gekb6eBPXi... I: NOTICE: Log filtering will replace 'sbuild-unshare-dummy-location' with '<>' I: NOTICE: Log filtering will replace 'build/wtdbg2-Y44uzl/resolver-5uwj6r' with '<>' +------------------------------------------------------------------------------+ | Update chroot | +------------------------------------------------------------------------------+ Get:1 http://mirror.einval.org/debian unstable InRelease [198 kB] Get:2 http://mirror.einval.org/debian unstable/main Sources [10.6 MB] Get:3 http://mirror.einval.org/debian unstable/main amd64 Packages [9929 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 Packages [9806 kB] Fetched 30.5 MB in 8s (3996 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages will be upgraded: sysvinit-utils 1 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. Need to get 32.3 kB of archives. After this operation, 0 B of additional disk space will be used. Get:1 http://mirror.einval.org/debian unstable/main arm64 sysvinit-utils arm64 3.09-2 [32.3 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 32.3 kB in 0s (1309 kB/s) (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 11851 files and directories currently installed.) Preparing to unpack .../sysvinit-utils_3.09-2_arm64.deb ... Unpacking sysvinit-utils (3.09-2) over (3.09-1) ... Setting up sysvinit-utils (3.09-2) ... +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Check APT --------- Checking available source versions... Download source files with APT ------------------------------ Reading package lists... NOTICE: 'wtdbg2' packaging is maintained in the 'Git' version control system at: https://salsa.debian.org/med-team/wtdbg2.git Please use: git clone https://salsa.debian.org/med-team/wtdbg2.git to retrieve the latest (possibly unreleased) updates to the package. Need to get 121 MB of source archives. Get:1 http://mirror.einval.org/debian unstable/main wtdbg2 2.5-10 (dsc) [2238 B] Get:2 http://mirror.einval.org/debian unstable/main wtdbg2 2.5-10 (tar) [237 kB] Get:3 http://mirror.einval.org/debian unstable/main wtdbg2 2.5-10 (diff) [121 MB] Fetched 121 MB in 2s (80.8 MB/s) Download complete and in download only mode I: NOTICE: Log filtering will replace 'build/wtdbg2-Y44uzl/wtdbg2-2.5' with '<>' I: NOTICE: Log filtering will replace 'build/wtdbg2-Y44uzl' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 Filtered Build-Depends: debhelper-compat (= 13), zlib1g-dev, libsimde-dev, libc-dev, libstdc++-dev, build-essential:arm64, fakeroot:arm64, crossbuild-essential-amd64:arm64, libc-dev:amd64, libstdc++-dev:amd64 dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [609 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [740 B] Get:5 copy:/<>/apt_archive ./ Packages [783 B] Fetched 2132 B in 0s (122 kB/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-13-base:amd64 gcc-13-cross-base gcc-13-x86-64-linux-gnu gcc-13-x86-64-linux-gnu-base gcc-14-base:amd64 gcc-14-cross-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libelf1t64 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:amd64 libgcc-13-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libio-string-perl libitm1:amd64 libitm1-amd64-cross liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:amd64 libquadmath0-amd64-cross libsimde-dev libstdc++-13-dev:amd64 libstdc++-13-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl m4 man-db po-debconf sensible-utils ucf zlib1g:amd64 zlib1g-dev:amd64 Suggested packages: autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-13-locales cpp-13-doc cpp-doc dh-make binutils-multiarch gcc-13-doc manpages-dev flex bison gdb-x86-64-linux-gnu gcc-doc gettext-doc libasprintf-dev libgettextpo-dev groff glibc-doc:amd64 libc-l10n:amd64 locales:amd64 libnss-nis:amd64 libnss-nisplus:amd64 manpages-dev:amd64 libstdc++-13-doc:amd64 libtool-doc gfortran | fortran95-compiler gcj-jdk libyaml-shell-perl m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx libidn2-0:amd64 libarchive-cpio-perl libltdl-dev libwww-perl libxml-sax-expat-perl libyaml-libyaml-perl | libyaml-syck-perl libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev binutils-x86-64-linux-gnu bsdextrautils cpp-13-x86-64-linux-gnu cpp-x86-64-linux-gnu cross-config crossbuild-essential-amd64 debhelper dh-autoreconf dh-strip-nondeterminism dpkg-cross dwz fakeroot file g++-13-x86-64-linux-gnu g++-x86-64-linux-gnu gcc-13-base:amd64 gcc-13-cross-base gcc-13-x86-64-linux-gnu gcc-13-x86-64-linux-gnu-base gcc-14-base:amd64 gcc-14-cross-base gcc-x86-64-linux-gnu gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasan8:amd64 libasan8-amd64-cross libatomic1:amd64 libatomic1-amd64-cross libc6:amd64 libc6-amd64-cross libc6-dev:amd64 libc6-dev-amd64-cross libconfig-auto-perl libconfig-inifiles-perl libcrypt-dev:amd64 libcrypt1:amd64 libdebhelper-perl libdebian-dpkgcross-perl libelf1t64 libfakeroot libfile-homedir-perl libfile-stripnondeterminism-perl libfile-which-perl libgcc-13-dev:amd64 libgcc-13-dev-amd64-cross libgcc-s1:amd64 libgcc-s1-amd64-cross libgomp1:amd64 libgomp1-amd64-cross libhwasan0:amd64 libhwasan0-amd64-cross libicu72 libio-string-perl libitm1:amd64 libitm1-amd64-cross liblocale-gettext-perl liblsan0:amd64 liblsan0-amd64-cross libmagic-mgc libmagic1t64 libpipeline1 libquadmath0:amd64 libquadmath0-amd64-cross libsimde-dev libstdc++-13-dev:amd64 libstdc++-13-dev-amd64-cross libstdc++6:amd64 libstdc++6-amd64-cross libtool libtsan2:amd64 libtsan2-amd64-cross libubsan1:amd64 libubsan1-amd64-cross libuchardet0 libxml-libxml-perl libxml-namespacesupport-perl libxml-sax-base-perl libxml-sax-perl libxml-simple-perl libxml2 libyaml-perl m4 man-db po-debconf sbuild-build-depends-main-dummy:amd64 sensible-utils ucf zlib1g:amd64 zlib1g-dev:amd64 0 upgraded, 96 newly installed, 0 to remove and 0 not upgraded. Need to get 98.7 MB of archives. After this operation, 415 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [924 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 liblocale-gettext-perl arm64 1.07-7 [14.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 sensible-utils all 0.0.23 [24.7 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 file arm64 1:5.45-3 [43.0 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 bsdextrautils arm64 2.40.1-8.1 [95.1 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 man-db arm64 2.12.1-2 [1394 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 ucf all 3.0043+nmu1 [55.2 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 m4 arm64 1.4.19-4 [277 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 autoconf all 2.71-3 [332 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 autopoint all 0.21-14 [496 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 gcc-13-x86-64-linux-gnu-base arm64 13.2.0-12cross1 [42.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 cpp-13-x86-64-linux-gnu arm64 13.2.0-12cross1 [9273 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 cpp-x86-64-linux-gnu arm64 4:13.2.0-7 [4732 B] Get:22 http://mirror.einval.org/debian unstable/main arm64 cross-config all 2.6.20 [16.3 kB] Get:23 http://mirror.einval.org/debian unstable/main arm64 binutils-x86-64-linux-gnu arm64 2.42-4 [2376 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 gcc-13-cross-base all 13.2.0-12cross1 [38.1 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 gcc-14-cross-base all 14-20240127-1cross1 [37.9 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libgcc-s1-amd64-cross all 14-20240127-1cross1 [71.7 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libgomp1-amd64-cross all 14-20240127-1cross1 [128 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 libitm1-amd64-cross all 14-20240127-1cross1 [25.2 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libatomic1-amd64-cross all 14-20240127-1cross1 [8996 B] Get:30 http://mirror.einval.org/debian unstable/main arm64 libasan8-amd64-cross all 14-20240127-1cross1 [2716 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 liblsan0-amd64-cross all 14-20240127-1cross1 [1199 kB] Get:32 http://mirror.einval.org/debian unstable/main arm64 libtsan2-amd64-cross all 14-20240127-1cross1 [2444 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libc6-amd64-cross all 2.38-11cross1 [1494 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libstdc++6-amd64-cross all 14-20240127-1cross1 [667 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libubsan1-amd64-cross all 14-20240127-1cross1 [1070 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libhwasan0-amd64-cross all 14-20240127-1cross1 [1434 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libquadmath0-amd64-cross all 14-20240127-1cross1 [146 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libgcc-13-dev-amd64-cross all 13.2.0-12cross1 [2536 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 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[609 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-base-perl all 1.09-3 [20.6 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libxml-sax-perl all 1.02+dfsg-3 [59.4 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libxml-libxml-perl arm64 2.0207+dfsg+really+2.0134-3.1 [299 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libxml-simple-perl all 2.25-2 [69.8 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libyaml-perl all 1.31-1 [64.8 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libconfig-auto-perl all 0.44-2 [19.2 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libfile-which-perl all 1.27-2 [15.1 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libdebian-dpkgcross-perl all 2.6.20 [15.3 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 dpkg-cross all 2.6.20 [25.8 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 crossbuild-essential-amd64 all 12.10 [3488 B] Get:61 http://mirror.einval.org/debian unstable/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get:62 http://mirror.einval.org/debian unstable/main arm64 libtool all 2.4.7-7 [517 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 dh-autoreconf all 20 [17.1 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get:67 http://mirror.einval.org/debian unstable/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 debhelper all 13.15.3 [901 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libfakeroot arm64 1.35-1 [28.3 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 fakeroot arm64 1.35-1 [73.6 kB] Get:75 http://mirror.einval.org/debian unstable/main amd64 gcc-13-base amd64 13.2.0-25 [45.8 kB] Get:76 http://mirror.einval.org/debian unstable/main amd64 gcc-14-base amd64 14.1.0-1 [44.3 kB] Get:77 http://mirror.einval.org/debian unstable/main amd64 libgcc-s1 amd64 14.1.0-1 [72.4 kB] Get:78 http://mirror.einval.org/debian unstable/main amd64 libc6 amd64 2.38-13 [2775 kB] Get:79 http://mirror.einval.org/debian unstable/main amd64 libasan8 amd64 14.1.0-1 [2721 kB] Get:80 http://mirror.einval.org/debian unstable/main amd64 libatomic1 amd64 14.1.0-1 [9168 B] Get:81 http://mirror.einval.org/debian unstable/main amd64 libcrypt1 amd64 1:4.4.36-4 [89.8 kB] Get:82 http://mirror.einval.org/debian unstable/main amd64 libcrypt-dev amd64 1:4.4.36-4 [119 kB] Get:83 http://mirror.einval.org/debian unstable/main amd64 libc6-dev amd64 2.38-13 [1917 kB] Get:84 http://mirror.einval.org/debian unstable/main amd64 libgomp1 amd64 14.1.0-1 [136 kB] Get:85 http://mirror.einval.org/debian unstable/main amd64 libitm1 amd64 14.1.0-1 [25.8 kB] Get:86 http://mirror.einval.org/debian unstable/main amd64 liblsan0 amd64 14.1.0-1 [1203 kB] Get:87 http://mirror.einval.org/debian unstable/main amd64 libtsan2 amd64 14.1.0-1 [2457 kB] Get:88 http://mirror.einval.org/debian unstable/main amd64 libstdc++6 amd64 14.1.0-1 [714 kB] Get:89 http://mirror.einval.org/debian unstable/main amd64 libubsan1 amd64 14.1.0-1 [1074 kB] Get:90 http://mirror.einval.org/debian unstable/main amd64 libhwasan0 amd64 14.1.0-1 [1486 kB] Get:91 http://mirror.einval.org/debian unstable/main amd64 libquadmath0 amd64 14.1.0-1 [145 kB] Get:92 http://mirror.einval.org/debian unstable/main amd64 libgcc-13-dev amd64 13.2.0-25 [2539 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libsimde-dev all 0.8.2-1 [465 kB] Get:94 http://mirror.einval.org/debian unstable/main amd64 libstdc++-13-dev amd64 13.2.0-25 [2289 kB] Get:95 http://mirror.einval.org/debian unstable/main amd64 zlib1g amd64 1:1.3.dfsg+really1.3.1-1 [87.9 kB] Get:96 http://mirror.einval.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 98.7 MB in 1s (88.6 MB/s) Selecting previously unselected package liblocale-gettext-perl. (Reading database ... 11851 files and directories currently installed.) Preparing to unpack .../00-liblocale-gettext-perl_1.07-7_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.23_all.deb ... Unpacking sensible-utils (0.0.23) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-14+b1_arm64.deb ... Unpacking gettext-base (0.21-14+b1) ... 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Setting up libpipeline1:arm64 (1.5.7-2) ... Setting up libsimde-dev (0.8.2-1) ... Setting up libfile-which-perl (1.27-2) ... Setting up libicu72:arm64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-8.1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up gcc-14-base:amd64 (14.1.0-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up libxml-namespacesupport-perl (1.12-2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up gcc-14-cross-base (14-20240127-1cross1) ... Setting up file (1:5.45-3) ... Setting up libyaml-perl (1.31-1) ... Setting up libgomp1-amd64-cross (14-20240127-1cross1) ... Setting up libfakeroot:arm64 (1.35-1) ... Setting up libelf1t64:arm64 (0.191-1+b1) ... Setting up fakeroot (1.35-1) ... update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode Setting up libitm1-amd64-cross (14-20240127-1cross1) ... Setting up libxml-sax-base-perl (1.09-3) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up cross-config (2.6.20) ... Setting up gcc-13-base:amd64 (13.2.0-25) ... Setting up libatomic1-amd64-cross (14-20240127-1cross1) ... Setting up gcc-13-cross-base (13.2.0-12cross1) ... Setting up libquadmath0-amd64-cross (14-20240127-1cross1) ... Setting up autopoint (0.21-14) ... Setting up libc6-amd64-cross (2.38-11cross1) ... Setting up autoconf (2.71-3) ... Setting up gcc-13-x86-64-linux-gnu-base:arm64 (13.2.0-12cross1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.23) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up libgcc-s1-amd64-cross (14-20240127-1cross1) ... Setting up libfile-homedir-perl (1.006-2) ... Setting up libxml2:arm64 (2.12.7+dfsg-3) ... Setting up liblocale-gettext-perl (1.07-7) ... Setting up binutils-x86-64-linux-gnu (2.42-4) ... Setting up libstdc++6-amd64-cross (14-20240127-1cross1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up cpp-13-x86-64-linux-gnu (13.2.0-12cross1) ... Setting up libasan8-amd64-cross (14-20240127-1cross1) ... Setting up liblsan0-amd64-cross (14-20240127-1cross1) ... Setting up libc6-dev-amd64-cross (2.38-11cross1) ... Setting up libtsan2-amd64-cross (14-20240127-1cross1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libhwasan0-amd64-cross (14-20240127-1cross1) ... Setting up libubsan1-amd64-cross (14-20240127-1cross1) ... Setting up ucf (3.0043+nmu1) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up cpp-x86-64-linux-gnu (4:13.2.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-3) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libgcc-13-dev-amd64-cross (13.2.0-12cross1) ... Setting up libxml-libxml-perl (2.0207+dfsg+really+2.0134-3.1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libstdc++-13-dev-amd64-cross (13.2.0-12cross1) ... Setting up gcc-13-x86-64-linux-gnu (13.2.0-12cross1) ... Setting up debhelper (13.15.3) ... Setting up libxml-simple-perl (2.25-2) ... Setting up g++-13-x86-64-linux-gnu (13.2.0-12cross1) ... Setting up gcc-x86-64-linux-gnu (4:13.2.0-7) ... Setting up libconfig-auto-perl (0.44-2) ... Setting up g++-x86-64-linux-gnu (4:13.2.0-7) ... Setting up libdebian-dpkgcross-perl (2.6.20) ... Setting up dpkg-cross (2.6.20) ... Setting up crossbuild-essential-amd64 (12.10) ... Setting up libgcc-s1:amd64 (14.1.0-1) ... Setting up libc6:amd64 (2.38-13) ... Setting up libhwasan0:amd64 (14.1.0-1) ... Setting up libasan8:amd64 (14.1.0-1) ... Setting up libtsan2:amd64 (14.1.0-1) ... Setting up libstdc++6:amd64 (14.1.0-1) ... Setting up liblsan0:amd64 (14.1.0-1) ... Setting up libitm1:amd64 (14.1.0-1) ... Setting up zlib1g:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libcrypt1:amd64 (1:4.4.36-4) ... Setting up libgomp1:amd64 (14.1.0-1) ... Setting up libquadmath0:amd64 (14.1.0-1) ... Setting up libatomic1:amd64 (14.1.0-1) ... Setting up libubsan1:amd64 (14.1.0-1) ... Setting up libgcc-13-dev:amd64 (13.2.0-25) ... Setting up libcrypt-dev:amd64 (1:4.4.36-4) ... Setting up libc6-dev:amd64 (2.38-13) ... Setting up libstdc++-13-dev:amd64 (13.2.0-25) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up sbuild-build-depends-main-dummy:amd64 (0.invalid.0) ... Processing triggers for base-files (13.3) ... Processing triggers for libc-bin (2.38-13) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (amd64 included in amd64 all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 6.1.0-7-arm64 #1 SMP Debian 6.1.20-1 (2023-03-19) arm64 (aarch64) Toolchain package versions: binutils_2.42-4 dpkg-dev_1.22.6 g++-13_13.2.0-25 gcc-13_13.2.0-25 libc6-dev_2.38-13 libstdc++-13-dev_13.2.0-25 libstdc++-13-dev-amd64-cross_13.2.0-12cross1 libstdc++6_14.1.0-1 libstdc++6-amd64-cross_14-20240127-1cross1 linux-libc-dev_6.8.12-1 Package versions: apt_2.9.5 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-14 autotools-dev_20220109.1 base-files_13.3 base-passwd_3.6.3 bash_5.2.21-2.1 binutils_2.42-4 binutils-aarch64-linux-gnu_2.42-4 binutils-common_2.42-4 binutils-x86-64-linux-gnu_2.42-4 bsdextrautils_2.40.1-8.1 bsdutils_1:2.40.1-8.1 build-essential_12.10 bzip2_1.0.8-5.1 coreutils_9.4-3.1 cpp_4:13.2.0-7 cpp-13_13.2.0-25 cpp-13-aarch64-linux-gnu_13.2.0-25 cpp-13-x86-64-linux-gnu_13.2.0-12cross1 cpp-aarch64-linux-gnu_4:13.2.0-7 cpp-x86-64-linux-gnu_4:13.2.0-7 cross-config_2.6.20 crossbuild-essential-amd64_12.10 dash_0.5.12-9 debconf_1.5.86 debhelper_13.15.3 debian-archive-keyring_2023.4 debianutils_5.19 dh-autoreconf_20 dh-strip-nondeterminism_1.14.0-1 diffutils_1:3.10-1 dpkg_1.22.6 dpkg-cross_2.6.20 dpkg-dev_1.22.6 dwz_0.15-1+b1 fakeroot_1.35-1 file_1:5.45-3 findutils_4.10.0-2 g++_4:13.2.0-7 g++-13_13.2.0-25 g++-13-aarch64-linux-gnu_13.2.0-25 g++-13-x86-64-linux-gnu_13.2.0-12cross1 g++-aarch64-linux-gnu_4:13.2.0-7 g++-x86-64-linux-gnu_4:13.2.0-7 gcc_4:13.2.0-7 gcc-13_13.2.0-25 gcc-13-aarch64-linux-gnu_13.2.0-25 gcc-13-base_13.2.0-25 gcc-13-cross-base_13.2.0-12cross1 gcc-13-x86-64-linux-gnu_13.2.0-12cross1 gcc-13-x86-64-linux-gnu-base_13.2.0-12cross1 gcc-14-base_14.1.0-1 gcc-14-cross-base_14-20240127-1cross1 gcc-aarch64-linux-gnu_4:13.2.0-7 gcc-x86-64-linux-gnu_4:13.2.0-7 gettext_0.21-14+b1 gettext-base_0.21-14+b1 gpgv_2.2.43-7 grep_3.11-4 groff-base_1.23.0-4 gzip_1.12-1.1 hostname_3.23+nmu2 init-system-helpers_1.66 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2 libapt-pkg6.0t64_2.9.5 libarchive-zip-perl_1.68-1 libasan8_14.1.0-1 libasan8-amd64-cross_14-20240127-1cross1 libatomic1_14.1.0-1 libatomic1-amd64-cross_14-20240127-1cross1 libattr1_1:2.5.2-1 libaudit-common_1:3.1.2-4 libaudit1_1:3.1.2-4 libbinutils_2.42-4 libblkid1_2.40.1-8.1 libbz2-1.0_1.0.8-5.1 libc-bin_2.38-13 libc-dev-bin_2.38-13 libc6_2.38-13 libc6-amd64-cross_2.38-11cross1 libc6-dev_2.38-13 libc6-dev-amd64-cross_2.38-11cross1 libcap-ng0_0.8.5-1 libcap2_1:2.66-5 libcc1-0_14.1.0-1 libconfig-auto-perl_0.44-2 libconfig-inifiles-perl_3.000003-2 libcrypt-dev_1:4.4.36-4 libcrypt1_1:4.4.36-4 libctf-nobfd0_2.42-4 libctf0_2.42-4 libdb5.3t64_5.3.28+dfsg2-7 libdebconfclient0_0.272 libdebhelper-perl_13.15.3 libdebian-dpkgcross-perl_2.6.20 libdpkg-perl_1.22.6 libelf1t64_0.191-1+b1 libfakeroot_1.35-1 libffi8_3.4.6-1 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.14.0-1 libfile-which-perl_1.27-2 libgcc-13-dev_13.2.0-25 libgcc-13-dev-amd64-cross_13.2.0-12cross1 libgcc-s1_14.1.0-1 libgcc-s1-amd64-cross_14-20240127-1cross1 libgcrypt20_1.10.3-3 libgdbm-compat4t64_1.23-6 libgdbm6t64_1.23-6 libgmp10_2:6.3.0+dfsg-2+b1 libgnutls30t64_3.8.5-4 libgomp1_14.1.0-1 libgomp1-amd64-cross_14-20240127-1cross1 libgpg-error0_1.49-2 libgprofng0_2.42-4 libhogweed6t64_3.9.1-2.2 libhwasan0_14.1.0-1 libhwasan0-amd64-cross_14-20240127-1cross1 libicu72_72.1-4+b1 libidn2-0_2.3.7-2 libio-string-perl_1.08-4 libisl23_0.26-3+b2 libitm1_14.1.0-1 libitm1-amd64-cross_14-20240127-1cross1 libjansson4_2.14-2+b2 liblocale-gettext-perl_1.07-7 liblsan0_14.1.0-1 liblsan0-amd64-cross_14-20240127-1cross1 liblz4-1_1.9.4-2 liblzma5_5.6.2-1 libmagic-mgc_1:5.45-3 libmagic1t64_1:5.45-3 libmd0_1.1.0-2 libmount1_2.40.1-8.1 libmpc3_1.3.1-1+b2 libmpfr6_4.2.1-1+b1 libnettle8t64_3.9.1-2.2 libp11-kit0_0.25.3-5 libpam-modules_1.5.3-7 libpam-modules-bin_1.5.3-7 libpam-runtime_1.5.3-7 libpam0g_1.5.3-7 libpcre2-8-0_10.42-4+b1 libperl5.38t64_5.38.2-5 libpipeline1_1.5.7-2 libquadmath0_14.1.0-1 libquadmath0-amd64-cross_14-20240127-1cross1 libseccomp2_2.5.5-1 libselinux1_3.5-2+b2 libsframe1_2.42-4 libsimde-dev_0.8.2-1 libsmartcols1_2.40.1-8.1 libssl3t64_3.2.2-1 libstdc++-13-dev_13.2.0-25 libstdc++-13-dev-amd64-cross_13.2.0-12cross1 libstdc++6_14.1.0-1 libstdc++6-amd64-cross_14-20240127-1cross1 libsystemd0_256-1 libtasn1-6_4.19.0-3+b2 libtinfo6_6.5-2 libtool_2.4.7-7 libtsan2_14.1.0-1 libtsan2-amd64-cross_14-20240127-1cross1 libubsan1_14.1.0-1 libubsan1-amd64-cross_14-20240127-1cross1 libuchardet0_0.0.8-1+b1 libudev1_256-1 libunistring5_1.2-1 libuuid1_2.40.1-8.1 libxml-libxml-perl_2.0207+dfsg+really+2.0134-3.1 libxml-namespacesupport-perl_1.12-2 libxml-sax-base-perl_1.09-3 libxml-sax-perl_1.02+dfsg-3 libxml-simple-perl_2.25-2 libxml2_2.12.7+dfsg-3 libxxhash0_0.8.2-2+b1 libyaml-perl_1.31-1 libzstd1_1.5.6+dfsg-1 linux-libc-dev_6.8.12-1 login_1:4.13+dfsg1-5 m4_1.4.19-4 make_4.3-4.1 man-db_2.12.1-2 mawk_1.3.4.20240123-1 ncurses-base_6.5-2 ncurses-bin_6.5-2 patch_2.7.6-7 perl_5.38.2-5 perl-base_5.38.2-5 perl-modules-5.38_5.38.2-5 po-debconf_1.0.21+nmu1 rpcsvc-proto_1.4.3-1 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.9-2 sensible-utils_0.0.23 sysvinit-utils_3.09-2 tar_1.35+dfsg-3 ucf_3.0043+nmu1 util-linux_2.40.1-8.1 xz-utils_5.6.2-1 zlib1g_1:1.3.dfsg+really1.3.1-1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: wtdbg2 Binary: wtdbg2, wtdbg2-examples Architecture: amd64 all Version: 2.5-10 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/ruanjue/wtdbg2 Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/wtdbg2 Vcs-Git: https://salsa.debian.org/med-team/wtdbg2.git Testsuite: autopkgtest Testsuite-Triggers: bwa, minimap2, samtools Build-Depends: debhelper-compat (= 13), zlib1g-dev, libsimde-dev Package-List: wtdbg2 deb science optional arch=amd64 wtdbg2-examples deb science optional arch=all Checksums-Sha1: 36e07424e7a08b2571ea8580e50e736c90458335 236627 wtdbg2_2.5.orig.tar.gz 44b51a7e508f22aeabc617aafb5c0d8e29e6dd4e 121143484 wtdbg2_2.5-10.debian.tar.xz Checksums-Sha256: a2ffc8503d29f491a9a38ef63230d5b3c96db78377b5d25c91df511d0df06413 236627 wtdbg2_2.5.orig.tar.gz da3317d3c0188eb316eca98aac4827b161b881b06ad20bf19b33899e4359eff0 121143484 wtdbg2_2.5-10.debian.tar.xz Files: 0368caed7480192c42b1a4ffa1ddbb7c 236627 wtdbg2_2.5.orig.tar.gz bf5459829cc2e4296c4ef645feba3d27 121143484 wtdbg2_2.5-10.debian.tar.xz Dgit: 71f5c400cd2fce84ee1a8d356e09e14c3c6e670f debian archive/debian/2.5-10 https://git.dgit.debian.org/wtdbg2 -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmY2fQwUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdpxUBAAjZ6vgaC1fFLIeygBhr7w7M1vOhM+ b3McUCjpOsYJBIG3oOlipk25tVs6Tl+F/ebFzc2GVN9KKqGIz22hXuRuFyeEuEdl DfKGIeAF0JWbxz68aLy6Lz4hRjvGC6Oew/LpbWGZFY67x2/JKId5f2GpapQlnztI LcmAtglxuNQCJ7g+6SEax6p/W98SHN0/+BTxL0wfRDc8a8h+6BwvDrrWypjhx2BL 4hVpAoSYo5ZQDmzOk7BZMMDk7Ecf3pMTH0SiABiSBaThqlIXlWzBtI4TAh6ORX2Z SH93PhyUHo2U60p+LL7iUHXLFu2FNcBmwBR1O4VQNcmGTKHTTAbNmiz9WBEVqfP5 0MqdXkfbUY1sCqKKWD37jwikPh5RvoM7selMmHqkMKnYG0rPr0fklYMJtn40qTGx aIEWW05iaSyqlJX+qmqqwY4jTXb3qGY2zRRg51WzB3IUHyk5oXnzlNRFvKn0cPVn qsFV6usZQ+F9JlYmx5/edDjYNcB0wZsHjJGcM5E64ee4ZdXW1Sf9uGODznfBKIgy FBZRziHSyM5krRhY44qEsBiv4sc0Hc76RnTudS+gAHtX7MvbBzDxV0FqzBXuuXpy jxuaQ/vVEV/UwW5/5OPI7EQQk6WTV3IuzHFbZy8zvhPMbqlqIYLt/RCLbahNawRc tbhFs78WYApTL+M= =xQYe -----END PGP SIGNATURE----- gpgv: Signature made Sat May 4 18:23:08 2024 UTC gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./wtdbg2_2.5-10.dsc: no acceptable signature found dpkg-source: info: extracting wtdbg2 in /<> dpkg-source: info: unpacking wtdbg2_2.5.orig.tar.gz dpkg-source: info: unpacking wtdbg2_2.5-10.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_install.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying simde dpkg-source: info: applying scripts-tweak Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf CONFIG_SITE=/etc/dpkg-cross/cross-config.amd64 DEB_BUILD_OPTIONS=nocheck HOME=/var/lib/sbuild LANG=en_GB.UTF-8 LC_ALL=C.UTF-8 LOGNAME=helmut OLDPWD=/ PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PWD=/<> SHELL=/bin/sh USER=helmut dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -aamd64 -Pcross,nocheck -us -uc -B -rfakeroot --jobs-try=1 dpkg-buildpackage: info: source package wtdbg2 dpkg-buildpackage: info: source version 2.5-10 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-architecture: warning: specified GNU system type x86_64-linux-gnu does not match CC system type aarch64-linux-gnu, try setting a correct CC environment variable dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j1 clean make[1]: Entering directory '/<>' rm -f *.o *.gcda *.gcno *.gcov gmon.out kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf make[1]: Leaving directory '/<>' debian/rules execute_after_dh_auto_clean make[1]: Entering directory '/<>' rm -f kbm2-avx2 kbm2-avx kbm2-sse4.1 kbm2-ssse3 kbm2-sse3 kbm2-sse2 wtdbg2-avx2 wtdbg2-avx wtdbg2-sse4.1 wtdbg2-ssse3 wtdbg2-sse3 wtdbg2-sse2 wtdbg-cns-avx2 wtdbg-cns-avx wtdbg-cns-sse4.1 wtdbg-cns-ssse3 wtdbg-cns-sse3 wtdbg-cns-sse2 wtpoa-cns-avx2 wtpoa-cns-avx wtpoa-cns-sse4.1 wtpoa-cns-ssse3 wtpoa-cns-sse3 wtpoa-cns-sse2 pgzf-avx2 pgzf-avx pgzf-sse4.1 pgzf-ssse3 pgzf-sse3 pgzf-sse2 # Cleanup additional binaries built for amd64 sub architectures. : # Cleanup the wealth of files modified by sed for various typos. make[1]: Leaving directory '/<>' dh_clean debian/rules binary-arch dh binary-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>' sed -i.dh_clean \ -e '1s/\/usr\/bin\/env perl/\/usr\/bin\/perl/' \ -e 's/memeory/memory/' \ -e 's/automaticly/automatically/' \ -e 's/ouput/output/' \ -e 's/vaule/value/' \ -e 's/annonymous/anonymous/' \ scripts/* *.c *.h *.md mkdir -p /<>/debian/wtdbg2/usr mkdir -p /<>/debian/wtdbg2/usr/lib/wtdbg2 for SIMD in avx2 avx sse4.1 ssse3 sse3 sse2; do \ export CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -m${SIMD}" ; \ make clean ; \ dh_auto_build -- SFX=-${SIMD} ; \ done make[2]: Entering directory '/<>' rm -f *.o *.gcda *.gcno *.gcov gmon.out kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-avx2 make[2]: Entering directory '/<>' x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o kbm2-avx2 kbm.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from kbm.h:23, from kbm.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj_file’: mem_share.h:1301:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1301 | fread(size, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1302:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1302 | fread(mem_type, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1303:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1303 | fread(cnt, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1304:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1304 | fread(aux_data, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj’: mem_share.h:919:42: warning: this statement may fall through [-Wimplicit-fallthrough=] 919 | for(m=0;m>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg2-avx2 wtdbg.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from wtdbg.c:20: wtdbg.h: In function ‘estimate_edge_length’: wtdbg.h:1926:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1926 | for(i=b,tot=0;i>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg-cns-avx2 wtdbg-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from dna.h:27, from kswx.h:24, from wtdbg-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtdbg-cns.c:23: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtpoa-cns-avx2 wtpoa-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now wtpoa-cns.c: In function ‘main’: wtpoa-cns.c:110:45: warning: this statement may fall through [-Wimplicit-fallthrough=] 110 | case 'p': print_lay = 1; | ~~~~~~~~~~^~~ wtpoa-cns.c:111:25: note: here 111 | case 'd': push_cplist(dbfs, optarg); break; | ^~~~ In file included from bit2vec.h:27, from poacns.h:23, from tripoa.h:23, from wtpoa.h:23, from wtpoa-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtpoa.h:25: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o pgzf-avx2 pgzf.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from pgzf.h:24, from pgzf.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>' make[2]: Entering directory '/<>' rm -f *.o *.gcda *.gcno *.gcov gmon.out kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-avx make[2]: Entering directory '/<>' x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o kbm2-avx kbm.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from kbm.h:23, from kbm.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj_file’: mem_share.h:1301:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1301 | fread(size, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1302:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1302 | fread(mem_type, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1303:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1303 | fread(cnt, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1304:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1304 | fread(aux_data, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj’: mem_share.h:919:42: warning: this statement may fall through [-Wimplicit-fallthrough=] 919 | for(m=0;m>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg2-avx wtdbg.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from wtdbg.c:20: wtdbg.h: In function ‘estimate_edge_length’: wtdbg.h:1926:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1926 | for(i=b,tot=0;i>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg-cns-avx wtdbg-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from dna.h:27, from kswx.h:24, from wtdbg-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtdbg-cns.c:23: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtpoa-cns-avx wtpoa-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now wtpoa-cns.c: In function ‘main’: wtpoa-cns.c:110:45: warning: this statement may fall through [-Wimplicit-fallthrough=] 110 | case 'p': print_lay = 1; | ~~~~~~~~~~^~~ wtpoa-cns.c:111:25: note: here 111 | case 'd': push_cplist(dbfs, optarg); break; | ^~~~ In file included from bit2vec.h:27, from poacns.h:23, from tripoa.h:23, from wtpoa.h:23, from wtpoa-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtpoa.h:25: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mavx -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o pgzf-avx pgzf.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from pgzf.h:24, from pgzf.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>' make[2]: Entering directory '/<>' rm -f *.o *.gcda *.gcno *.gcov gmon.out kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-sse4.1 make[2]: Entering directory '/<>' x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse4.1 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o kbm2-sse4.1 kbm.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from kbm.h:23, from kbm.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj_file’: mem_share.h:1301:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1301 | fread(size, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1302:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1302 | fread(mem_type, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1303:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1303 | fread(cnt, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1304:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1304 | fread(aux_data, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj’: mem_share.h:919:42: warning: this statement may fall through [-Wimplicit-fallthrough=] 919 | for(m=0;m>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse4.1 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg2-sse4.1 wtdbg.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from wtdbg.c:20: wtdbg.h: In function ‘estimate_edge_length’: wtdbg.h:1926:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1926 | for(i=b,tot=0;i>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse4.1 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg-cns-sse4.1 wtdbg-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from dna.h:27, from kswx.h:24, from wtdbg-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtdbg-cns.c:23: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse4.1 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtpoa-cns-sse4.1 wtpoa-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now wtpoa-cns.c: In function ‘main’: wtpoa-cns.c:110:45: warning: this statement may fall through [-Wimplicit-fallthrough=] 110 | case 'p': print_lay = 1; | ~~~~~~~~~~^~~ wtpoa-cns.c:111:25: note: here 111 | case 'd': push_cplist(dbfs, optarg); break; | ^~~~ In file included from bit2vec.h:27, from poacns.h:23, from tripoa.h:23, from wtpoa.h:23, from wtpoa-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtpoa.h:25: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse4.1 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o pgzf-sse4.1 pgzf.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from pgzf.h:24, from pgzf.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>' make[2]: Entering directory '/<>' rm -f *.o *.gcda *.gcno *.gcov gmon.out kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-ssse3 make[2]: Entering directory '/<>' x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mssse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o kbm2-ssse3 kbm.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from kbm.h:23, from kbm.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj_file’: mem_share.h:1301:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1301 | fread(size, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1302:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1302 | fread(mem_type, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1303:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1303 | fread(cnt, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1304:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1304 | fread(aux_data, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj’: mem_share.h:919:42: warning: this statement may fall through [-Wimplicit-fallthrough=] 919 | for(m=0;m>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mssse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg2-ssse3 wtdbg.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from wtdbg.c:20: wtdbg.h: In function ‘estimate_edge_length’: wtdbg.h:1926:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1926 | for(i=b,tot=0;i>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mssse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg-cns-ssse3 wtdbg-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from dna.h:27, from kswx.h:24, from wtdbg-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtdbg-cns.c:23: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mssse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtpoa-cns-ssse3 wtpoa-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now wtpoa-cns.c: In function ‘main’: wtpoa-cns.c:110:45: warning: this statement may fall through [-Wimplicit-fallthrough=] 110 | case 'p': print_lay = 1; | ~~~~~~~~~~^~~ wtpoa-cns.c:111:25: note: here 111 | case 'd': push_cplist(dbfs, optarg); break; | ^~~~ In file included from bit2vec.h:27, from poacns.h:23, from tripoa.h:23, from wtpoa.h:23, from wtpoa-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtpoa.h:25: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -mssse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o pgzf-ssse3 pgzf.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from pgzf.h:24, from pgzf.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>' make[2]: Entering directory '/<>' rm -f *.o *.gcda *.gcno *.gcov gmon.out kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-sse3 make[2]: Entering directory '/<>' x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o kbm2-sse3 kbm.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from kbm.h:23, from kbm.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj_file’: mem_share.h:1301:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1301 | fread(size, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1302:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1302 | fread(mem_type, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1303:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1303 | fread(cnt, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1304:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1304 | fread(aux_data, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj’: mem_share.h:919:42: warning: this statement may fall through [-Wimplicit-fallthrough=] 919 | for(m=0;m>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg2-sse3 wtdbg.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from wtdbg.c:20: wtdbg.h: In function ‘estimate_edge_length’: wtdbg.h:1926:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1926 | for(i=b,tot=0;i>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg-cns-sse3 wtdbg-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from dna.h:27, from kswx.h:24, from wtdbg-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtdbg-cns.c:23: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtpoa-cns-sse3 wtpoa-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now wtpoa-cns.c: In function ‘main’: wtpoa-cns.c:110:45: warning: this statement may fall through [-Wimplicit-fallthrough=] 110 | case 'p': print_lay = 1; | ~~~~~~~~~~^~~ wtpoa-cns.c:111:25: note: here 111 | case 'd': push_cplist(dbfs, optarg); break; | ^~~~ In file included from bit2vec.h:27, from poacns.h:23, from tripoa.h:23, from wtpoa.h:23, from wtpoa-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtpoa.h:25: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse3 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o pgzf-sse3 pgzf.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from pgzf.h:24, from pgzf.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>' make[2]: Entering directory '/<>' rm -f *.o *.gcda *.gcno *.gcov gmon.out kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-sse2 make[2]: Entering directory '/<>' x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o kbm2-sse2 kbm.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from kbm.h:23, from kbm.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj_file’: mem_share.h:1301:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1301 | fread(size, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1302:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1302 | fread(mem_type, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1303:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1303 | fread(cnt, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:1304:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1304 | fread(aux_data, sizeof(size_t), 1, file); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘mem_load_obj’: mem_share.h:919:42: warning: this statement may fall through [-Wimplicit-fallthrough=] 919 | for(m=0;m>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg2-sse2 wtdbg.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from wtdbg.c:20: wtdbg.h: In function ‘estimate_edge_length’: wtdbg.h:1926:17: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 1926 | for(i=b,tot=0;i>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtdbg-cns-sse2 wtdbg-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from list.h:28, from dna.h:27, from kswx.h:24, from wtdbg-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtdbg-cns.c:23: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o wtpoa-cns-sse2 wtpoa-cns.c ksw.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now wtpoa-cns.c: In function ‘main’: wtpoa-cns.c:110:45: warning: this statement may fall through [-Wimplicit-fallthrough=] 110 | case 'p': print_lay = 1; | ~~~~~~~~~~^~~ wtpoa-cns.c:111:25: note: here 111 | case 'd': push_cplist(dbfs, optarg); break; | ^~~~ In file included from bit2vec.h:27, from poacns.h:23, from tripoa.h:23, from wtpoa.h:23, from wtpoa-cns.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h: In function ‘get_linux_proc_info’: mem_share.h:560:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 560 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:568:9: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 568 | fscanf(fp, "%lu%lu", &tmp, &tmp2); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from wtpoa.h:25: filereader.h: In function ‘file_src_thread_func’: filereader.h:157:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 157 | if(_file == NULL){ | ^ filereader.h:162:33: note: here 162 | case FILEREADER_ATTR_PROC: | ^~~~ filereader.h:163:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 163 | if(_file == NULL){ | ^ filereader.h:168:33: note: here 168 | case FILEREADER_ATTR_USER: | ^~~~ filereader.h:169:43: warning: this statement may fall through [-Wimplicit-fallthrough=] 169 | if(_file == NULL){ | ^ filereader.h:174:33: note: here 174 | default: | ^~~~~~~ x86_64-linux-gnu-gcc -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -msse2 -g3 -W -Wall -Wno-unused-but-set-variable -O4 -DVERSION="2.5" -DRELEASE="20190621" -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -o pgzf-sse2 pgzf.c -lm -lrt -lpthread -lz -Wl,-z,relro -Wl,-z,now In file included from pgzf.h:24, from pgzf.c:20: mem_share.h: In function ‘get_linux_sys_info’: mem_share.h:514:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 514 | fscanf(fp, "%llu", memtotal); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:517:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 517 | fscanf(fp, "%llu", &freed); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:519:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 519 | fscanf(fp, "%llu", &buffered); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ mem_share.h:521:33: warning: ignoring return value of ‘fscanf’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 521 | fscanf(fp, "%llu", &cached); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh: command-omitted: The call to "dh_auto_test -a" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_prep -a debian/rules override_dh_auto_install make[1]: Entering directory '/<>' dh_install -p wtdbg2 debian/bin/simd-dispatch /usr/lib/wtdbg2/ for SIMD in avx2 avx sse4.1 ssse3 sse3 sse2; do \ export CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/<>=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -DSIMDE_ENABLE_OPENMP -fopenmp-simd -m${SIMD}" ; \ dh_auto_build -- SFX=-${SIMD} BIN=/<>/debian/wtdbg2/usr/lib/wtdbg2 install ; \ done make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-avx2 BIN=/<>/debian/wtdbg2/usr/lib/wtdbg2 install make[2]: Entering directory '/<>' mkdir -p /<>/debian/wtdbg2/usr/lib/wtdbg2 && cp -fvu kbm2-avx2 wtdbg2-avx2 wtdbg-cns-avx2 wtpoa-cns-avx2 pgzf-avx2 /<>/debian/wtdbg2/usr/lib/wtdbg2 'kbm2-avx2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/kbm2-avx2' 'wtdbg2-avx2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg2-avx2' 'wtdbg-cns-avx2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg-cns-avx2' 'wtpoa-cns-avx2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtpoa-cns-avx2' 'pgzf-avx2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/pgzf-avx2' make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-avx BIN=/<>/debian/wtdbg2/usr/lib/wtdbg2 install make[2]: Entering directory '/<>' mkdir -p /<>/debian/wtdbg2/usr/lib/wtdbg2 && cp -fvu kbm2-avx wtdbg2-avx wtdbg-cns-avx wtpoa-cns-avx pgzf-avx /<>/debian/wtdbg2/usr/lib/wtdbg2 'kbm2-avx' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/kbm2-avx' 'wtdbg2-avx' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg2-avx' 'wtdbg-cns-avx' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg-cns-avx' 'wtpoa-cns-avx' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtpoa-cns-avx' 'pgzf-avx' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/pgzf-avx' make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-sse4.1 BIN=/<>/debian/wtdbg2/usr/lib/wtdbg2 install make[2]: Entering directory '/<>' mkdir -p /<>/debian/wtdbg2/usr/lib/wtdbg2 && cp -fvu kbm2-sse4.1 wtdbg2-sse4.1 wtdbg-cns-sse4.1 wtpoa-cns-sse4.1 pgzf-sse4.1 /<>/debian/wtdbg2/usr/lib/wtdbg2 'kbm2-sse4.1' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/kbm2-sse4.1' 'wtdbg2-sse4.1' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg2-sse4.1' 'wtdbg-cns-sse4.1' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg-cns-sse4.1' 'wtpoa-cns-sse4.1' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtpoa-cns-sse4.1' 'pgzf-sse4.1' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/pgzf-sse4.1' make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-ssse3 BIN=/<>/debian/wtdbg2/usr/lib/wtdbg2 install make[2]: Entering directory '/<>' mkdir -p /<>/debian/wtdbg2/usr/lib/wtdbg2 && cp -fvu kbm2-ssse3 wtdbg2-ssse3 wtdbg-cns-ssse3 wtpoa-cns-ssse3 pgzf-ssse3 /<>/debian/wtdbg2/usr/lib/wtdbg2 'kbm2-ssse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/kbm2-ssse3' 'wtdbg2-ssse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg2-ssse3' 'wtdbg-cns-ssse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg-cns-ssse3' 'wtpoa-cns-ssse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtpoa-cns-ssse3' 'pgzf-ssse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/pgzf-ssse3' make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-sse3 BIN=/<>/debian/wtdbg2/usr/lib/wtdbg2 install make[2]: Entering directory '/<>' mkdir -p /<>/debian/wtdbg2/usr/lib/wtdbg2 && cp -fvu kbm2-sse3 wtdbg2-sse3 wtdbg-cns-sse3 wtpoa-cns-sse3 pgzf-sse3 /<>/debian/wtdbg2/usr/lib/wtdbg2 'kbm2-sse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/kbm2-sse3' 'wtdbg2-sse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg2-sse3' 'wtdbg-cns-sse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg-cns-sse3' 'wtpoa-cns-sse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtpoa-cns-sse3' 'pgzf-sse3' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/pgzf-sse3' make[2]: Leaving directory '/<>' make -j1 "INSTALL=install --strip-program=true" PKG_CONFIG=x86_64-linux-gnu-pkg-config CXX=x86_64-linux-gnu-g\+\+ CC=x86_64-linux-gnu-gcc SFX=-sse2 BIN=/<>/debian/wtdbg2/usr/lib/wtdbg2 install make[2]: Entering directory '/<>' mkdir -p /<>/debian/wtdbg2/usr/lib/wtdbg2 && cp -fvu kbm2-sse2 wtdbg2-sse2 wtdbg-cns-sse2 wtpoa-cns-sse2 pgzf-sse2 /<>/debian/wtdbg2/usr/lib/wtdbg2 'kbm2-sse2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/kbm2-sse2' 'wtdbg2-sse2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg2-sse2' 'wtdbg-cns-sse2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtdbg-cns-sse2' 'wtpoa-cns-sse2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/wtpoa-cns-sse2' 'pgzf-sse2' -> '/<>/debian/wtdbg2/usr/lib/wtdbg2/pgzf-sse2' make[2]: Leaving directory '/<>' mkdir -p /<>/debian/wtdbg2/usr/bin cd /<>/debian/wtdbg2/usr/bin \ && for prog in kbm2 wtdbg2 wtdbg-cns wtpoa-cns pgzf; do \ ln -s ../lib/wtdbg2/simd-dispatch ${prog} ; done make[1]: Leaving directory '/<>' dh_install -a debian/rules execute_after_dh_install make[1]: Entering directory '/<>' find debian/ -name '*.dh_clean' -delete make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a dh_installman -a dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'wtdbg2' in '../wtdbg2_2.5-10_amd64.deb'. dpkg-deb: building package 'wtdbg2-dbgsym' in '../wtdbg2-dbgsym_2.5-10_amd64.deb'. dpkg-genbuildinfo --build=any -O../wtdbg2_2.5-10_amd64.buildinfo dpkg-genchanges --build=any -O../wtdbg2_2.5-10_amd64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2024-06-17T16:52:28Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ wtdbg2_2.5-10_amd64.changes: ---------------------------- Format: 1.8 Date: Sat, 04 May 2024 19:59:44 +0200 Source: wtdbg2 Binary: wtdbg2 wtdbg2-dbgsym Built-For-Profiles: cross nocheck Architecture: amd64 Version: 2.5-10 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: wtdbg2 - de novo sequence assembler for long noisy reads Closes: 1045984 Changes: wtdbg2 (2.5-10) unstable; urgency=medium . * d/rules: repair double source builds. This involved cleaning up traces of CPU flag specific builds, in the context of SIMDe builds. This also involved preserving a number of files affected by sed commands doing a wealth of changes on a number of files. Lists of binaries and CPU flags involved in the cleanup process could be reused to simplify a bit the build procedure. (Closes: #1045984) * d/control: declare compliance to standards version 4.7.0. * d/control: add myself to uploaders. Checksums-Sha1: d0e85200ca92b1c3bb96bf49c973fa989ec52b08 8850752 wtdbg2-dbgsym_2.5-10_amd64.deb 75d71fac48bc34d09003170b15e6d2c233bb7c3a 4895 wtdbg2_2.5-10_amd64.buildinfo b074245dd0fd592b6c5a691df66adf80adb02a41 713752 wtdbg2_2.5-10_amd64.deb Checksums-Sha256: 9fabbc48415a8be8883c74c5b5a407a0f4742ed8ba5e85c0ac860e80235cb4e9 8850752 wtdbg2-dbgsym_2.5-10_amd64.deb a570037925849ae065d5f88b1efde53f497abb5c940618dd298181905589dac2 4895 wtdbg2_2.5-10_amd64.buildinfo 01c59f808a767fef6c5f64480d7f5ba9780956cdee523036b2e1b5a0b3e6cb9a 713752 wtdbg2_2.5-10_amd64.deb Files: db363eb57c47ee5ea13b6699175b50c8 8850752 debug optional wtdbg2-dbgsym_2.5-10_amd64.deb 8f57e7a65c03e3140777db212177ced8 4895 science optional wtdbg2_2.5-10_amd64.buildinfo 16dd4baac72adeb05c1d8f0eae127753 713752 science optional wtdbg2_2.5-10_amd64.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: wtdbg2 Binary: wtdbg2 wtdbg2-dbgsym Architecture: amd64 Version: 2.5-10 Checksums-Md5: db363eb57c47ee5ea13b6699175b50c8 8850752 wtdbg2-dbgsym_2.5-10_amd64.deb 16dd4baac72adeb05c1d8f0eae127753 713752 wtdbg2_2.5-10_amd64.deb Checksums-Sha1: d0e85200ca92b1c3bb96bf49c973fa989ec52b08 8850752 wtdbg2-dbgsym_2.5-10_amd64.deb b074245dd0fd592b6c5a691df66adf80adb02a41 713752 wtdbg2_2.5-10_amd64.deb Checksums-Sha256: 9fabbc48415a8be8883c74c5b5a407a0f4742ed8ba5e85c0ac860e80235cb4e9 8850752 wtdbg2-dbgsym_2.5-10_amd64.deb 01c59f808a767fef6c5f64480d7f5ba9780956cdee523036b2e1b5a0b3e6cb9a 713752 wtdbg2_2.5-10_amd64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Mon, 17 Jun 2024 16:52:27 +0000 Build-Path: /<> Build-Tainted-By: merged-usr-via-aliased-dirs Installed-Build-Depends: autoconf (= 2.71-3), automake (= 1:1.16.5-1.3), autopoint (= 0.21-14), autotools-dev (= 20220109.1), base-files (= 13.3), base-passwd (= 3.6.3), bash (= 5.2.21-2.1), binutils (= 2.42-4), binutils-aarch64-linux-gnu (= 2.42-4), binutils-common (= 2.42-4), bsdextrautils (= 2.40.1-8.1), bsdutils (= 1:2.40.1-8.1), build-essential (= 12.10), bzip2 (= 1.0.8-5.1), coreutils (= 9.4-3.1), cpp (= 4:13.2.0-7), cpp-13 (= 13.2.0-25), cpp-13-aarch64-linux-gnu (= 13.2.0-25), cpp-aarch64-linux-gnu (= 4:13.2.0-7), dash (= 0.5.12-9), debconf (= 1.5.86), debhelper (= 13.15.3), debianutils (= 5.19), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.0-1), diffutils (= 1:3.10-1), dpkg (= 1.22.6), dpkg-dev (= 1.22.6), dwz (= 0.15-1+b1), file (= 1:5.45-3), findutils (= 4.10.0-2), g++ (= 4:13.2.0-7), g++-13 (= 13.2.0-25), g++-13-aarch64-linux-gnu (= 13.2.0-25), g++-aarch64-linux-gnu (= 4:13.2.0-7), gcc (= 4:13.2.0-7), gcc-13 (= 13.2.0-25), gcc-13-aarch64-linux-gnu (= 13.2.0-25), gcc-13-base (= 13.2.0-25), gcc-14-base (= 14.1.0-1), gcc-aarch64-linux-gnu (= 4:13.2.0-7), gettext (= 0.21-14+b1), gettext-base (= 0.21-14+b1), grep (= 3.11-4), groff-base (= 1.23.0-4), gzip (= 1.12-1.1), hostname (= 3.23+nmu2), init-system-helpers (= 1.66), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.1.0-1), libatomic1 (= 14.1.0-1), libattr1 (= 1:2.5.2-1), libaudit-common (= 1:3.1.2-4), libaudit1 (= 1:3.1.2-4), libbinutils (= 2.42-4), libblkid1 (= 2.40.1-8.1), libbz2-1.0 (= 1.0.8-5.1), libc-bin (= 2.38-13), libc-dev-bin (= 2.38-13), libc6 (= 2.38-13), libc6-dev (= 2.38-13), libcap-ng0 (= 0.8.5-1), libcap2 (= 1:2.66-5), libcc1-0 (= 14.1.0-1), libcrypt-dev (= 1:4.4.36-4), libcrypt1 (= 1:4.4.36-4), libctf-nobfd0 (= 2.42-4), libctf0 (= 2.42-4), libdb5.3t64 (= 5.3.28+dfsg2-7), libdebconfclient0 (= 0.272), libdebhelper-perl (= 13.15.3), libdpkg-perl (= 1.22.6), libelf1t64 (= 0.191-1+b1), libfile-stripnondeterminism-perl (= 1.14.0-1), libgcc-13-dev (= 13.2.0-25), libgcc-s1 (= 14.1.0-1), libgdbm-compat4t64 (= 1.23-6), libgdbm6t64 (= 1.23-6), libgmp10 (= 2:6.3.0+dfsg-2+b1), libgomp1 (= 14.1.0-1), libgprofng0 (= 2.42-4), libhwasan0 (= 14.1.0-1), libicu72 (= 72.1-4+b1), libisl23 (= 0.26-3+b2), libitm1 (= 14.1.0-1), libjansson4 (= 2.14-2+b2), liblsan0 (= 14.1.0-1), liblzma5 (= 5.6.2-1), libmagic-mgc (= 1:5.45-3), libmagic1t64 (= 1:5.45-3), libmd0 (= 1.1.0-2), libmount1 (= 2.40.1-8.1), libmpc3 (= 1.3.1-1+b2), libmpfr6 (= 4.2.1-1+b1), libpam-modules (= 1.5.3-7), libpam-modules-bin (= 1.5.3-7), libpam-runtime (= 1.5.3-7), libpam0g (= 1.5.3-7), libpcre2-8-0 (= 10.42-4+b1), libperl5.38t64 (= 5.38.2-5), libpipeline1 (= 1.5.7-2), libquadmath0 (= 14.1.0-1), libseccomp2 (= 2.5.5-1), libselinux1 (= 3.5-2+b2), libsframe1 (= 2.42-4), libsimde-dev (= 0.8.2-1), libsmartcols1 (= 2.40.1-8.1), libssl3t64 (= 3.2.2-1), libstdc++-13-dev (= 13.2.0-25), libstdc++6 (= 14.1.0-1), libsystemd0 (= 256-1), libtinfo6 (= 6.5-2), libtool (= 2.4.7-7), libtsan2 (= 14.1.0-1), libubsan1 (= 14.1.0-1), libuchardet0 (= 0.0.8-1+b1), libudev1 (= 256-1), libunistring5 (= 1.2-1), libuuid1 (= 2.40.1-8.1), libxml2 (= 2.12.7+dfsg-3), libzstd1 (= 1.5.6+dfsg-1), linux-libc-dev (= 6.8.12-1), login (= 1:4.13+dfsg1-5), m4 (= 1.4.19-4), make (= 4.3-4.1), man-db (= 2.12.1-2), mawk (= 1.3.4.20240123-1), ncurses-base (= 6.5-2), ncurses-bin (= 6.5-2), patch (= 2.7.6-7), perl (= 5.38.2-5), perl-base (= 5.38.2-5), perl-modules-5.38 (= 5.38.2-5), po-debconf (= 1.0.21+nmu1), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.23), sysvinit-utils (= 3.09-2), tar (= 1.35+dfsg-3), util-linux (= 2.40.1-8.1), xz-utils (= 5.6.2-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1) Environment: DEB_BUILD_OPTIONS="nocheck parallel=1" DEB_BUILD_PROFILES="cross nocheck" LANG="en_GB.UTF-8" LC_ALL="C.UTF-8" LC_COLLATE="C.UTF-8" SOURCE_DATE_EPOCH="1714845584" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ wtdbg2-dbgsym_2.5-10_amd64.deb ------------------------------ new Debian package, version 2.0. size 8850752 bytes: control archive=1964 bytes. 1554 bytes, 12 lines control 3263 bytes, 31 lines md5sums Package: wtdbg2-dbgsym Source: wtdbg2 Version: 2.5-10 Auto-Built-Package: debug-symbols Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 9919 Depends: wtdbg2 (= 2.5-10) Section: debug Priority: optional Description: debug symbols for wtdbg2 Build-Ids: 000ad4f0674c688abff831762e8dfd65046ab334 09a4d20ac0c729eca7d9993cd0810ad467cd3864 0ceb7ff0c23a6366119a7b75876d72cd9d792860 19e4b97cf82f5b090e4bddd8dfb8609cfe4a1801 1e38dab67867b9288c1a28bbe716a05337d167db 210d1540c707feafd9b69596165e9b369293bfa6 356a475fb3374a0ef4c725361813c9bd3b76a6bb 3b9ebddf004dc924f4778cbfd07972e3b19c7224 3d2e9f364aa8f64c5ffcb2d398452248001aca19 3f2dbb482e7c5219a8f1f006ec5d646090fa706d 4f572f099bb7b8ac8cb0f1b590d5089a35cf8fa6 56327763f6e2aaee9f54fbc75919980e5afd4e6e 5a461d8c6ce58a85bce982146eed93f5c6c91851 64ca3209dd3d29250a853600b4674e4a145d6f36 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./usr/share/doc/ lrwxrwxrwx root/root 0 2024-05-04 17:59 ./usr/share/doc/wtdbg2-dbgsym -> wtdbg2 wtdbg2_2.5-10_amd64.deb ----------------------- new Debian package, version 2.0. size 713752 bytes: control archive=2644 bytes. 1228 bytes, 24 lines control 4153 bytes, 65 lines md5sums Package: wtdbg2 Version: 2.5-10 Architecture: amd64 Maintainer: Debian Med Packaging Team Installed-Size: 6867 Depends: libc6 (>= 2.38), zlib1g (>= 1:1.2.0) Suggests: perl:any, minimap2, samtools, mummer, wtdbg2-examples Section: science Priority: optional Homepage: https://github.com/ruanjue/wtdbg2 Description: de novo sequence assembler for long noisy reads Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly output. Wtdbg2 is able to assemble the human and even the 32Gb Axolotl genome at a speed tens of times faster than CANU and FALCON while producing contigs of comparable base accuracy. . During assembly, wtdbg2 chops reads into 1024bp segments, merges similar segments into a vertex and connects vertices based on the segment adjacency on reads. The resulting graph is called fuzzy Bruijn graph (FBG). It is akin to De Bruijn graph but permits mismatches/gaps and keeps read paths when collapsing k-mers. The use of FBG distinguishes wtdbg2 from the majority of long-read assemblers. drwxr-xr-x root/root 0 2024-05-04 17:59 ./ drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/ drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/bin/ lrwxrwxrwx root/root 0 2024-05-04 17:59 ./usr/bin/kbm2 -> ../lib/wtdbg2/simd-dispatch lrwxrwxrwx root/root 0 2024-05-04 17:59 ./usr/bin/pgzf -> ../lib/wtdbg2/simd-dispatch lrwxrwxrwx root/root 0 2024-05-04 17:59 ./usr/bin/wtdbg-cns -> ../lib/wtdbg2/simd-dispatch lrwxrwxrwx root/root 0 2024-05-04 17:59 ./usr/bin/wtdbg2 -> ../lib/wtdbg2/simd-dispatch lrwxrwxrwx root/root 0 2024-05-04 17:59 ./usr/bin/wtpoa-cns -> ../lib/wtdbg2/simd-dispatch drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/lib/ drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/lib/wtdbg2/ -rwxr-xr-x root/root 325944 2024-05-04 17:59 ./usr/lib/wtdbg2/kbm2-avx -rwxr-xr-x root/root 330040 2024-05-04 17:59 ./usr/lib/wtdbg2/kbm2-avx2 -rwxr-xr-x root/root 317752 2024-05-04 17:59 ./usr/lib/wtdbg2/kbm2-sse2 -rwxr-xr-x 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./usr/lib/wtdbg2/wtpoa-cns-sse4.1 -rwxr-xr-x root/root 174392 2024-05-04 17:59 ./usr/lib/wtdbg2/wtpoa-cns-ssse3 drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/share/ drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/share/doc/ drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/share/doc/wtdbg2/ -rw-r--r-- root/root 3375 2024-05-04 17:59 ./usr/share/doc/wtdbg2/README.md.gz -rw-r--r-- root/root 1159 2024-05-04 17:59 ./usr/share/doc/wtdbg2/changelog.Debian.gz -rw-r--r-- root/root 2110 2024-05-04 17:59 ./usr/share/doc/wtdbg2/copyright drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/share/man/ drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/share/man/man1/ -rw-r--r-- root/root 1679 2024-05-04 17:59 ./usr/share/man/man1/kbm2.1.gz -rw-r--r-- root/root 751 2024-05-04 17:59 ./usr/share/man/man1/pgzf.1.gz -rw-r--r-- root/root 931 2024-05-04 17:59 ./usr/share/man/man1/wtdbg-cns.1.gz -rw-r--r-- root/root 4737 2024-05-04 17:59 ./usr/share/man/man1/wtdbg2.1.gz -rw-r--r-- root/root 1529 2024-05-04 17:59 ./usr/share/man/man1/wtpoa-cns.1.gz drwxr-xr-x root/root 0 2024-05-04 17:59 ./usr/share/wtdbg2/ -rwxr-xr-x root/root 289 2024-05-04 17:59 ./usr/share/wtdbg2/best_kbm_hit.pl -rwxr-xr-x root/root 318 2024-05-04 17:59 ./usr/share/wtdbg2/best_minimap_hit.pl -rwxr-xr-x root/root 2174 2024-05-04 17:59 ./usr/share/wtdbg2/best_sam_hits4longreads.pl -rwxr-xr-x root/root 1413 2024-05-04 17:59 ./usr/share/wtdbg2/dbm_index_dot.pl -rwxr-xr-x root/root 680 2024-05-04 17:59 ./usr/share/wtdbg2/dbm_index_fa.pl -rwxr-xr-x root/root 1230 2024-05-04 17:59 ./usr/share/wtdbg2/dbm_read_dot.pl -rwxr-xr-x root/root 2452 2024-05-04 17:59 ./usr/share/wtdbg2/dbm_read_fa.pl -rwxr-xr-x root/root 407 2024-05-04 17:59 ./usr/share/wtdbg2/fa2fq.pl -rwxr-xr-x root/root 238 2024-05-04 17:59 ./usr/share/wtdbg2/fa2tab.pl -rwxr-xr-x root/root 206 2024-05-04 17:59 ./usr/share/wtdbg2/first_n_bases.pl -rwxr-xr-x root/root 180 2024-05-04 17:59 ./usr/share/wtdbg2/first_n_seqs.pl -rwxr-xr-x root/root 144 2024-05-04 17:59 ./usr/share/wtdbg2/fq2fa.pl -rwxr-xr-x root/root 1100 2024-05-04 17:59 ./usr/share/wtdbg2/hlcolor -rwxr-xr-x root/root 743 2024-05-04 17:59 ./usr/share/wtdbg2/longest_pacbio_subreads.pl -rwxr-xr-x root/root 1015 2024-05-04 17:59 ./usr/share/wtdbg2/mmpoa.pl -rwxr-xr-x root/root 415 2024-05-04 17:59 ./usr/share/wtdbg2/mum_assess.sh -rwxr-xr-x root/root 505 2024-05-04 17:59 ./usr/share/wtdbg2/num_n50.pl -rwxr-xr-x root/root 1024 2024-05-04 17:59 ./usr/share/wtdbg2/rename_fa.pl -rwxr-xr-x root/root 933 2024-05-04 17:59 ./usr/share/wtdbg2/rename_fq.pl -rwxr-xr-x root/root 371 2024-05-04 17:59 ./usr/share/wtdbg2/rev_seq.pl -rwxr-xr-x root/root 4729 2024-05-04 17:59 ./usr/share/wtdbg2/runit.pl -rwxr-xr-x root/root 2871 2024-05-04 17:59 ./usr/share/wtdbg2/sam2dbgcns.pl -rwxr-xr-x root/root 932 2024-05-04 17:59 ./usr/share/wtdbg2/seq_n50.pl -rwxr-xr-x root/root 650 2024-05-04 17:59 ./usr/share/wtdbg2/split_seqs_2.pl -rwxr-xr-x root/root 342 2024-05-04 17:59 ./usr/share/wtdbg2/split_seqs_3.pl -rwxr-xr-x root/root 1013 2024-05-04 17:59 ./usr/share/wtdbg2/wtdbg-dot2gfa.pl lintian ------- Setup apt archive ----------------- Merged Build-Depends: lintian:arm64 Filtered Build-Depends: lintian:arm64 dpkg-deb: building package 'sbuild-build-depends-lintian-dummy' in '/<>/apt_archive/sbuild-build-depends-lintian-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [615 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [1322 B] Get:5 copy:/<>/apt_archive ./ Packages [1401 B] Fetched 3338 B in 0s (183 kB/s) Reading package lists... Reading package lists... Install lintian build dependencies (apt-based resolver) ------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... Execute external solver... The following additional packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common t1utils unzip Suggested packages: isoquery libxml-parser-perl libdata-dump-perl libcrypt-ssleay-perl libscalar-number-perl libbareword-filehandles-perl libindirect-perl libmultidimensional-perl libbusiness-isbn-perl libregexp-ipv6-perl libauthen-ntlm-perl binutils-multiarch libtext-template-perl readline-doc zip Recommended packages: gnupg libcgi-fast-perl libhtml-format-perl libio-compress-brotli-perl liblist-someutils-xs-perl libfreezethaw-perl libmath-base85-perl libsocket6-perl libpackage-stash-xs-perl libxstring-perl libdata-dump-perl libhttp-daemon-perl libmailtools-perl The following NEW packages will be installed: ca-certificates diffstat gpg gpgconf iso-codes libaliased-perl libapt-pkg-perl libassuan0 libb-hooks-endofscope-perl libb-hooks-op-check-perl libberkeleydb-perl libcapture-tiny-perl libcgi-pm-perl libclass-data-inheritable-perl libclass-method-modifiers-perl libclass-xsaccessor-perl libclone-perl libconfig-tiny-perl libconst-fast-perl libcpanel-json-xs-perl libdata-dpath-perl libdata-messagepack-perl libdata-optlist-perl libdata-validate-domain-perl libdata-validate-ip-perl libdata-validate-uri-perl libdevel-callchecker-perl libdevel-size-perl libdevel-stacktrace-perl libdynaloader-functions-perl libemail-address-xs-perl libencode-locale-perl libexception-class-perl libfile-basedir-perl libfile-find-rule-perl libfile-listing-perl libfont-ttf-perl libhtml-form-perl libhtml-html5-entities-perl libhtml-parser-perl libhtml-tagset-perl libhtml-tokeparser-simple-perl libhtml-tree-perl libhttp-cookies-perl libhttp-date-perl libhttp-message-perl libhttp-negotiate-perl libimport-into-perl libio-html-perl libio-interactive-perl libio-socket-ssl-perl libipc-run3-perl libipc-system-simple-perl libiterator-perl libiterator-util-perl libjson-maybexs-perl liblist-compare-perl liblist-someutils-perl liblist-utilsby-perl liblwp-mediatypes-perl liblwp-protocol-https-perl liblz1 liblzo2-2 libmarkdown2 libmldbm-perl libmodule-implementation-perl libmodule-runtime-perl libmoo-perl libmoox-aliases-perl libmouse-perl libnamespace-clean-perl libnet-domain-tld-perl libnet-http-perl libnet-ipv6addr-perl libnet-netmask-perl libnet-ssleay-perl libnetaddr-ip-perl libnumber-compare-perl libpackage-stash-perl libparams-classify-perl libparams-util-perl libpath-tiny-perl libperlio-gzip-perl libperlio-utf8-strict-perl libproc-processtable-perl libreadline8t64 libregexp-wildcards-perl librole-tiny-perl libsereal-decoder-perl libsereal-encoder-perl libsort-versions-perl libsqlite3-0 libstrictures-perl libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl libsub-name-perl libsub-quote-perl libsyntax-keyword-try-perl libterm-readkey-perl libtext-glob-perl libtext-levenshteinxs-perl libtext-markdown-discount-perl libtext-xslate-perl libtime-duration-perl libtime-moment-perl libtimedate-perl libtry-tiny-perl libunicode-utf8-perl liburi-perl libvariable-magic-perl libwww-mechanize-perl libwww-perl libwww-robotrules-perl libxs-parse-keyword-perl libyaml-0-2 libyaml-libyaml-perl lintian lzop netbase openssl patchutils perl-openssl-defaults plzip readline-common sbuild-build-depends-lintian-dummy:amd64 t1utils unzip 0 upgraded, 129 newly installed, 0 to remove and 0 not upgraded. Need to get 12.6 MB of archives. After this operation, 52.8 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-lintian-dummy 0.invalid.0 [844 B] Get:2 http://mirror.einval.org/debian unstable/main arm64 netbase all 6.4 [12.8 kB] Get:3 http://mirror.einval.org/debian unstable/main arm64 readline-common all 8.2-4 [69.3 kB] Get:4 http://mirror.einval.org/debian unstable/main arm64 openssl arm64 3.2.2-1 [1327 kB] Get:5 http://mirror.einval.org/debian unstable/main arm64 ca-certificates all 20240203 [158 kB] Get:6 http://mirror.einval.org/debian unstable/main arm64 diffstat arm64 1.66-1 [31.6 kB] Get:7 http://mirror.einval.org/debian unstable/main arm64 libassuan0 arm64 2.5.6-1+b1 [48.0 kB] Get:8 http://mirror.einval.org/debian unstable/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get:9 http://mirror.einval.org/debian unstable/main arm64 gpgconf arm64 2.2.43-7 [113 kB] Get:10 http://mirror.einval.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.0-1 [843 kB] Get:11 http://mirror.einval.org/debian unstable/main arm64 gpg arm64 2.2.43-7 [475 kB] Get:12 http://mirror.einval.org/debian unstable/main arm64 iso-codes all 4.16.0-1 [2936 kB] Get:13 http://mirror.einval.org/debian unstable/main arm64 libaliased-perl all 0.34-3 [13.5 kB] Get:14 http://mirror.einval.org/debian unstable/main arm64 libapt-pkg-perl arm64 0.1.40+b5 [63.8 kB] Get:15 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b1 [10.6 kB] Get:16 http://mirror.einval.org/debian unstable/main arm64 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get:17 http://mirror.einval.org/debian unstable/main arm64 libdevel-callchecker-perl arm64 0.009-1 [16.0 kB] Get:18 http://mirror.einval.org/debian unstable/main arm64 libparams-classify-perl arm64 0.015-2+b3 [22.3 kB] Get:19 http://mirror.einval.org/debian unstable/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get:20 http://mirror.einval.org/debian unstable/main arm64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get:21 http://mirror.einval.org/debian unstable/main arm64 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get:22 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get:23 http://mirror.einval.org/debian unstable/main arm64 libvariable-magic-perl arm64 0.64-1 [43.5 kB] Get:24 http://mirror.einval.org/debian unstable/main arm64 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get:25 http://mirror.einval.org/debian unstable/main arm64 libberkeleydb-perl arm64 0.64-2+b3 [120 kB] Get:26 http://mirror.einval.org/debian unstable/main arm64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get:27 http://mirror.einval.org/debian unstable/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get:28 http://mirror.einval.org/debian unstable/main arm64 liburi-perl all 5.28-1 [98.6 kB] Get:29 http://mirror.einval.org/debian unstable/main arm64 libhtml-parser-perl arm64 3.82-1 [96.9 kB] Get:30 http://mirror.einval.org/debian unstable/main arm64 libcgi-pm-perl all 4.65-1 [217 kB] Get:31 http://mirror.einval.org/debian unstable/main arm64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get:32 http://mirror.einval.org/debian unstable/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB] Get:33 http://mirror.einval.org/debian unstable/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b3 [35.2 kB] Get:34 http://mirror.einval.org/debian unstable/main arm64 libclone-perl arm64 0.46-1+b2 [13.6 kB] Get:35 http://mirror.einval.org/debian unstable/main arm64 libconfig-tiny-perl all 2.30-1 [18.9 kB] Get:36 http://mirror.einval.org/debian unstable/main arm64 libparams-util-perl arm64 1.102-3 [23.4 kB] Get:37 http://mirror.einval.org/debian unstable/main arm64 libsub-install-perl all 0.929-1 [10.5 kB] Get:38 http://mirror.einval.org/debian unstable/main arm64 libdata-optlist-perl all 0.114-1 [10.6 kB] Get:39 http://mirror.einval.org/debian unstable/main arm64 libsub-exporter-perl all 0.990-1 [50.6 kB] Get:40 http://mirror.einval.org/debian unstable/main arm64 libconst-fast-perl all 0.014-2 [8792 B] Get:41 http://mirror.einval.org/debian unstable/main arm64 libcpanel-json-xs-perl arm64 4.38-1 [127 kB] Get:42 http://mirror.einval.org/debian unstable/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get:43 http://mirror.einval.org/debian unstable/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get:44 http://mirror.einval.org/debian unstable/main arm64 libiterator-perl all 0.03+ds1-2 [18.8 kB] Get:45 http://mirror.einval.org/debian unstable/main arm64 libiterator-util-perl all 0.02+ds1-2 [14.0 kB] Get:46 http://mirror.einval.org/debian unstable/main arm64 libdata-dpath-perl all 0.59-1 [43.6 kB] Get:47 http://mirror.einval.org/debian unstable/main arm64 libdata-messagepack-perl arm64 1.02-1+b3 [31.2 kB] Get:48 http://mirror.einval.org/debian unstable/main arm64 libnet-domain-tld-perl all 1.75-3 [31.9 kB] Get:49 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-domain-perl all 0.10-1.1 [11.1 kB] Get:50 http://mirror.einval.org/debian unstable/main arm64 libnet-ipv6addr-perl all 1.02-1 [21.7 kB] Get:51 http://mirror.einval.org/debian unstable/main arm64 libnet-netmask-perl all 2.0002-2 [28.6 kB] Get:52 http://mirror.einval.org/debian unstable/main arm64 libnetaddr-ip-perl arm64 4.079+dfsg-2+b3 [97.6 kB] Get:53 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-ip-perl all 0.31-1 [20.6 kB] Get:54 http://mirror.einval.org/debian unstable/main arm64 libdata-validate-uri-perl all 0.07-3 [11.0 kB] Get:55 http://mirror.einval.org/debian unstable/main arm64 libdevel-size-perl arm64 0.84-1 [23.7 kB] Get:56 http://mirror.einval.org/debian unstable/main arm64 libemail-address-xs-perl arm64 1.05-1+b3 [28.3 kB] Get:57 http://mirror.einval.org/debian unstable/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get:58 http://mirror.einval.org/debian unstable/main arm64 libipc-system-simple-perl all 1.30-2 [26.8 kB] Get:59 http://mirror.einval.org/debian unstable/main arm64 libfile-basedir-perl all 0.09-2 [15.1 kB] Get:60 http://mirror.einval.org/debian unstable/main arm64 libnumber-compare-perl all 0.03-3 [6332 B] Get:61 http://mirror.einval.org/debian unstable/main arm64 libtext-glob-perl all 0.11-3 [7676 B] Get:62 http://mirror.einval.org/debian unstable/main arm64 libfile-find-rule-perl all 0.34-3 [26.6 kB] Get:63 http://mirror.einval.org/debian unstable/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get:64 http://mirror.einval.org/debian unstable/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get:65 http://mirror.einval.org/debian unstable/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get:66 http://mirror.einval.org/debian unstable/main arm64 libfont-ttf-perl all 1.06-2 [318 kB] Get:67 http://mirror.einval.org/debian unstable/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get:68 http://mirror.einval.org/debian unstable/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get:69 http://mirror.einval.org/debian unstable/main arm64 libhttp-message-perl all 6.46-1 [79.7 kB] Get:70 http://mirror.einval.org/debian unstable/main arm64 libhtml-form-perl all 6.11-1 [33.1 kB] Get:71 http://mirror.einval.org/debian unstable/main arm64 libhtml-html5-entities-perl all 0.004-3 [21.0 kB] Get:72 http://mirror.einval.org/debian unstable/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get:73 http://mirror.einval.org/debian unstable/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get:74 http://mirror.einval.org/debian unstable/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get:75 http://mirror.einval.org/debian unstable/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get:76 http://mirror.einval.org/debian unstable/main arm64 libnet-ssleay-perl arm64 1.94-1+b1 [328 kB] Get:77 http://mirror.einval.org/debian unstable/main arm64 libio-socket-ssl-perl all 2.085-1 [218 kB] Get:78 http://mirror.einval.org/debian unstable/main arm64 libnet-http-perl all 6.23-1 [23.9 kB] Get:79 http://mirror.einval.org/debian unstable/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get:80 http://mirror.einval.org/debian unstable/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get:81 http://mirror.einval.org/debian unstable/main arm64 libwww-perl all 6.77-1 [183 kB] Get:82 http://mirror.einval.org/debian unstable/main arm64 libhtml-tokeparser-simple-perl all 3.16-4 [39.1 kB] Get:83 http://mirror.einval.org/debian unstable/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB] Get:84 http://mirror.einval.org/debian unstable/main arm64 libio-interactive-perl all 1.025-1 [11.4 kB] Get:85 http://mirror.einval.org/debian unstable/main arm64 libipc-run3-perl all 0.049-1 [31.5 kB] Get:86 http://mirror.einval.org/debian unstable/main arm64 libjson-maybexs-perl all 1.004005-1 [12.9 kB] Get:87 http://mirror.einval.org/debian unstable/main arm64 liblist-compare-perl all 0.55-2 [65.7 kB] Get:88 http://mirror.einval.org/debian unstable/main arm64 liblist-someutils-perl all 0.59-1 [37.1 kB] Get:89 http://mirror.einval.org/debian unstable/main arm64 liblist-utilsby-perl all 0.12-2 [15.5 kB] Get:90 http://mirror.einval.org/debian unstable/main arm64 liblz1 arm64 1.15~pre1-1 [37.7 kB] Get:91 http://mirror.einval.org/debian unstable/main arm64 liblzo2-2 arm64 2.10-3 [48.9 kB] Get:92 http://mirror.einval.org/debian unstable/main arm64 libmarkdown2 arm64 2.2.7-2+b1 [33.2 kB] Get:93 http://mirror.einval.org/debian unstable/main arm64 libmldbm-perl all 2.05-4 [16.8 kB] Get:94 http://mirror.einval.org/debian unstable/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB] Get:95 http://mirror.einval.org/debian unstable/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB] Get:96 http://mirror.einval.org/debian unstable/main arm64 libmoo-perl all 2.005005-1 [58.0 kB] Get:97 http://mirror.einval.org/debian unstable/main arm64 libstrictures-perl all 2.000006-1 [18.6 kB] Get:98 http://mirror.einval.org/debian unstable/main arm64 libmoox-aliases-perl all 0.001006-2 [7156 B] Get:99 http://mirror.einval.org/debian unstable/main arm64 libmouse-perl arm64 2.5.10-1+b5 [141 kB] Get:100 http://mirror.einval.org/debian unstable/main arm64 libpackage-stash-perl all 0.40-1 [22.0 kB] Get:101 http://mirror.einval.org/debian unstable/main arm64 libsub-identify-perl arm64 0.14-3+b2 [11.2 kB] Get:102 http://mirror.einval.org/debian unstable/main arm64 libsub-name-perl arm64 0.27-1+b2 [12.3 kB] Get:103 http://mirror.einval.org/debian unstable/main arm64 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get:104 http://mirror.einval.org/debian unstable/main arm64 libpath-tiny-perl all 0.144-1 [56.4 kB] Get:105 http://mirror.einval.org/debian unstable/main arm64 libperlio-gzip-perl arm64 0.20-1+b3 [17.4 kB] Get:106 http://mirror.einval.org/debian unstable/main arm64 libperlio-utf8-strict-perl arm64 0.010-1+b2 [11.4 kB] Get:107 http://mirror.einval.org/debian unstable/main arm64 libproc-processtable-perl arm64 0.636-1+b2 [41.6 kB] Get:108 http://mirror.einval.org/debian unstable/main arm64 libregexp-wildcards-perl all 1.05-3 [14.1 kB] Get:109 http://mirror.einval.org/debian unstable/main arm64 libsereal-decoder-perl arm64 5.004+ds-1+b2 [95.4 kB] Get:110 http://mirror.einval.org/debian unstable/main arm64 libsereal-encoder-perl arm64 5.004+ds-1+b2 [97.6 kB] Get:111 http://mirror.einval.org/debian unstable/main arm64 libsort-versions-perl all 1.62-3 [8928 B] Get:112 http://mirror.einval.org/debian unstable/main arm64 libxs-parse-keyword-perl arm64 0.42-1 [58.3 kB] Get:113 http://mirror.einval.org/debian unstable/main arm64 libsyntax-keyword-try-perl arm64 0.29-2 [26.6 kB] Get:114 http://mirror.einval.org/debian unstable/main arm64 libterm-readkey-perl arm64 2.38-2+b3 [24.4 kB] Get:115 http://mirror.einval.org/debian unstable/main arm64 libtext-levenshteinxs-perl arm64 0.03-5+b3 [8680 B] Get:116 http://mirror.einval.org/debian unstable/main arm64 libtext-markdown-discount-perl arm64 0.16-1+b2 [13.1 kB] Get:117 http://mirror.einval.org/debian unstable/main arm64 libtext-xslate-perl arm64 3.5.9-2 [171 kB] Get:118 http://mirror.einval.org/debian unstable/main arm64 libtime-duration-perl all 1.21-2 [13.1 kB] Get:119 http://mirror.einval.org/debian unstable/main arm64 libtime-moment-perl arm64 0.44-2+b3 [72.2 kB] Get:120 http://mirror.einval.org/debian unstable/main arm64 libunicode-utf8-perl arm64 0.62-2+b2 [19.9 kB] Get:121 http://mirror.einval.org/debian unstable/main arm64 libwww-mechanize-perl all 2.18-1 [114 kB] Get:122 http://mirror.einval.org/debian unstable/main arm64 libyaml-0-2 arm64 0.2.5-1+b1 [49.0 kB] Get:123 http://mirror.einval.org/debian unstable/main arm64 libyaml-libyaml-perl arm64 0.89+ds-1+b1 [33.2 kB] Get:124 http://mirror.einval.org/debian unstable/main arm64 plzip arm64 1.11-1 [58.8 kB] Get:125 http://mirror.einval.org/debian unstable/main arm64 lzop arm64 1.04-2 [82.8 kB] Get:126 http://mirror.einval.org/debian unstable/main arm64 patchutils arm64 0.4.2-1 [73.5 kB] Get:127 http://mirror.einval.org/debian unstable/main arm64 t1utils arm64 1.41-4 [59.8 kB] Get:128 http://mirror.einval.org/debian unstable/main arm64 unzip arm64 6.0-28 [157 kB] Get:129 http://mirror.einval.org/debian unstable/main arm64 lintian all 2.117.0 [1052 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 12.6 MB in 0s (51.1 MB/s) Selecting previously unselected package netbase. (Reading database ... 17625 files and directories currently installed.) Preparing to unpack .../000-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_3.2.2-1_arm64.deb ... Unpacking openssl (3.2.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package diffstat. Preparing to unpack .../004-diffstat_1.66-1_arm64.deb ... Unpacking diffstat (1.66-1) ... Selecting previously unselected package libassuan0:arm64. Preparing to unpack .../005-libassuan0_2.5.6-1+b1_arm64.deb ... Unpacking libassuan0:arm64 (2.5.6-1+b1) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../006-libreadline8t64_8.2-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package gpgconf. Preparing to unpack .../007-gpgconf_2.2.43-7_arm64.deb ... Unpacking gpgconf (2.2.43-7) ... Selecting previously unselected package libsqlite3-0:arm64. Preparing to unpack .../008-libsqlite3-0_3.46.0-1_arm64.deb ... Unpacking libsqlite3-0:arm64 (3.46.0-1) ... 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Preparing to unpack .../128-sbuild-build-depends-lintian-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Setting up libapt-pkg-perl (0.1.40+b5) ... Setting up liblz1:arm64 (1.15~pre1-1) ... Setting up libberkeleydb-perl:arm64 (0.64-2+b3) ... Setting up plzip (1.11-1) ... update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip (lzip) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-compressor (lzip-compressor) in auto mode update-alternatives: using /usr/bin/lzip.plzip to provide /usr/bin/lzip-decompressor (lzip-decompressor) in auto mode Setting up libunicode-utf8-perl (0.62-2+b2) ... Setting up libmouse-perl (2.5.10-1+b5) ... Setting up libdata-messagepack-perl (1.02-1+b3) ... Setting up libdynaloader-functions-perl (0.003-3) ... Setting up libtext-glob-perl (0.11-3) ... Setting up libclass-method-modifiers-perl (2.15-1) ... Setting up liblist-compare-perl (0.55-2) ... 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Setting up libperlio-gzip-perl (0.20-1+b3) ... Setting up readline-common (8.2-4) ... Setting up libhtml-html5-entities-perl (0.004-3) ... Setting up libsereal-decoder-perl (5.004+ds-1+b2) ... Setting up libmarkdown2:arm64 (2.2.7-2+b1) ... Setting up liburi-perl (5.28-1) ... Setting up iso-codes (4.16.0-1) ... Setting up libnet-ipv6addr-perl (1.02-1) ... Setting up libdata-validate-ip-perl (0.31-1) ... Setting up libemail-address-xs-perl (1.05-1+b3) ... Setting up libnet-ssleay-perl:arm64 (1.94-1+b1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libfile-basedir-perl (0.09-2) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libtext-markdown-discount-perl (0.16-1+b2) ... Setting up libexception-class-perl (1.45-1) ... Setting up libdevel-callchecker-perl:arm64 (0.009-1) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libdata-validate-uri-perl (0.07-3) ... Setting up libdata-optlist-perl (0.114-1) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libhtml-parser-perl:arm64 (3.82-1) ... Setting up gpgconf (2.2.43-7) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up gpg (2.2.43-7) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libhttp-message-perl (6.46-1) ... Setting up libhtml-form-perl (6.11-1) ... Setting up libiterator-perl (0.03+ds1-2) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libiterator-util-perl (0.02+ds1-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up libparams-classify-perl:arm64 (0.015-2+b3) ... Setting up libcgi-pm-perl (4.65-1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libconst-fast-perl (0.014-2) ... Setting up libdata-dpath-perl (0.59-1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libimport-into-perl (1.002005-2) ... Setting up libmoo-perl (2.005005-1) ... Setting up liblist-someutils-perl (0.59-1) ... Setting up libmoox-aliases-perl (0.001006-2) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up libwww-perl (6.77-1) ... Setting up libhtml-tokeparser-simple-perl (3.16-4) ... Setting up libwww-mechanize-perl (2.18-1) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up lintian (2.117.0) ... Setting up sbuild-build-depends-lintian-dummy:amd64 (0.invalid.0) ... Processing triggers for libc-bin (2.38-13) ... Processing triggers for man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Running lintian... I: Lintian run was successful. +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Profiles: cross nocheck Build Type: any Build-Space: 183656 Build-Time: 1287 Distribution: unstable Foreign Architectures: amd64 Host Architecture: amd64 Install-Time: 49 Job: wtdbg2_2.5-10 Lintian: pass Machine Architecture: arm64 Package: wtdbg2 Package-Time: 1377 Source-Version: 2.5-10 Space: 183656 Status: successful Version: 2.5-10 -------------------------------------------------------------------------------- Finished at 2024-06-17T16:52:28Z Build needed 00:22:57, 183656k disk space